The rate of allelism of lethal genes in a geographically structured population

The expected rate of allelism, E[I(x)], of lethal genes between two colonies with distance x in a structured population is studied by using one- and two-dimensional stepping-stone models. It is shown that E[I(x)] depends on the magnitude of selection in heterozygous condition (h), the rate of migration among adjacent colonies (m), the number of loci which produce lethal mutations (n) and the effective population size of each colony (N).——E[I(x)] always decreases with distance x. The rate of decrease is affected strongly by the magnitude of m. The rate of decrease is faster when m is small. E[I(x)] also decreases with increasing N and n. The effect of h on E[I(x)] is somewhat complicated. However, E[I(0)] is always smaller when h is small than when it is large.——For large x, the following approximate formulae may be obtained: (see PDF) where q and Var (q) are the mean and the variance of gene frequencies in each colony, t is approximated as t=h, (see PDF), -h for the partially recessive, completely recessive, and overdominant lethals, respectively, and C₀ is a function of m and t. It is clear that E[I(x)] declines exponentially with x in a one-dimensional habitat. The decrease E[I(x)] is faster in a two-dimensional habitat than in a one-dimensional habitat. The present result is applied to some of the existing data and the estimation of population parameters is also discussed.     

A Contribution to our Knowledge of the Mermithidae (Nematoda)

The genera of the insect parasitic nematode family Mermithidae axe reviewed, and 16 of them axe redescribed and illustrated. Information is given on methods of rearing adult mermithid specimens and on host specificity. The four types of merrnithid life cycles axe described in detail. One figure shows the variety of insects parasitized by merrnithids and the location and size of the nematode within the insect. Several mermithid eggs are illustrated, and their usefulness in identification is discussed.Taxonomically, the primary emphasis is on the adult stages of the merrnithJds with larval and egg characteristics supplementaxy. An emended family diagnosis is given. Merrnis subnigrescens is considered a synonym of M. nigrescens, and M. tahitiensis is synonymized with M. mirabilis. Hydromermis contorta is accepted, leaving the genus Paramermis in an uncertain position. Study of the Steiner collections of Limnornermis bathybia indicates that Limnornerrnis is accepted as a valid genus. The adults of Agamermis decaudata are descried and illustrated for the first time. The genus Gastromermis is limited to the long single-spiculed forms, as it is now apparent that five or more genera have ventrally shifted mouth orifices. Amphirnermis tinyi n. sp. is described from damselflies from Louisiana. The genus Lanceimermis is accepted, and three species in this genus are illustrated. The taxon Reesimermis nielseni has been accepted for this important parasite of more than 20 mosquito species. This nematode previously has been referred to as Romanomermis sp. Romanomermis iyengari is transferred to the genus Reesirnermis. Diximermis peterseni n. gen., n. sp., from anopheline mosquitoes, is described and iUustrated. The adults of Agamomermis culicis which parasitize Aedes sollicitans, are described for the first time, and the species placed in a new genus, Perutilimermis. The new genus Neornesornermis is proposed for Mesomermis flumenalis Welch, 1962. Several problems on mermithid morphology and taxonomy are discussed. Type material is established for some of the taxa.     

On the validity of Epeorella Ulmer, 1939 (Ephemeroptera,Heptageniidae) with general considerations on the Heptageniidae of the Sunda Islands

The type material of Epeorella borneonia Ulmer, 1939, the sole species of the genus Epeorella Ulmer, 1939 is reinvestigated and a lectotype (male imago) is designated. Based on several morphological structures, the synonymy with Epeorus Eaton, 1881 (Rhithrogeninae) is rejected. Epeorella stat. prop., known only at the winged stages, belongs to the subfamily Ecdyonurinae, and is a probable endemic of the island of Borneo. The newly erected genus Darthus Webb & McCafferty, 2007, also endemic to Borneo and only known by one species at the nymphal stage, is shown to be a junior subjective synonym of Epeorella. The new combination Epeorella vadora (Webb & McCafferty, 2007) is proposed for the species. The distribution of known heptageniid species from the Sunda Islands is discussed.     

The characterization of N-acetylglucosaminidases from the limpet Patella vulgata (L.)

The α- and β-N-acetylglucosaminidase activity of the limpet Patella vulgata (L.) is due to two enzymes. One of these enzymes hydrolyses both α- and β-N-acetylglucosaminidases and is referred to α,β-N-acetylglucosaminidase. The other is a β-N-acetylglucosaminidase (EC 3.2.1.30). Both enzymes have been isolated and characterized as glycoproteins containing 12% hexose, mainly galactose. The amino acid, neutral sugar and amino sugar content of the two enzymes is very similar, and the main difference lies in the presence of 9% sialic acid in β-N-acetylglucosaminidase. The molecular weight of α,β-N-acetylglucosaminidase is 217 000 and that of β-N-acetylglucosaminidase is 136 000. Evidence has been obtained for the presence of an additional sub-unit in the α,β-enzyme.     

Taxonomic revision of the Kimmeridgian (Upper Jurassic) genusMesosimoceras (Ammonoidea) and institution of the new genusPresimoceras (Ammonitina,Idoceratinae)

Presimoceras is a new genus of Idoceratinae. The biostratigraphical range ofPresimoceras is limited to theStrombecki, Divisum and lower part of theAcanthicum Zone within the Kimmeridgian (in the Southern European sense). The genusMesosimoceras (Idoceratinae) was instituted by Spath (1925), withSimoceras cavouri Gemmellaro as type species; this genus is here emended with the institution ofPresimoceras n. gen. The species groupcavouri-risgoviense is preserved in the emended genusMesosimoceras, while the groupherbichiludovicii-teres is accommodated inPresimoceras on account of the radical and numerous differences and the stratigraphical gap betweenMesosimoceras andPresimoceras. As type species of the new genusAmmonites nodulatus Quenstedt is designated. The new genus is here subdivided into three groups of species:herbichi, ludovicii andteres. Phylogenetically,Presimoceras is derived fromPassendorferia, Mesosimoceras fromNebrodites.     

Taxonomic update of Clitocybula sensu lato with a new generic classification

The taxonomy and phylogeny of the hydropoid clade (genera Clitocybula s.l., Megacollybia, Leucoinocybe gen. nov., Hydropus, Trogia, Gerronema, Porotheleum and Lignomphalia gen. nov.) in Europe is studied using morphological and molecular approaches; the first three genera in detail including all known European species. Only two European species remain in Clitocybula s.str., Clitocybula lacerata and Clitocybula familia. The European C. lacerata is a species complex which should be treated as C. lacerata agg. at the current state of knowledge. A neotype originating from type area was designated to fix the application of the name. The presence of American species Clitocybula abundans in Europe is insufficiently proved. “Clitocybula dryadicola ? belongs to the genus Hydropus, and Clitocybula tilieti has an unclear systematic position. The results showed that Megacollybia and Leucoinocybe represent independent genera separated from Clitocybula. The genus Leucoinocybe is validly published with two European species, Leucoinocybe lenta and Leucoinocybe taniae. “Clitocybula flavoaurantia” proved to be conspecific with the latter species. The genus Lignomphalia is published for “Pseudoomphalina lignicola”, a lignicolous omphalinoid species. The Indian “Clitocybula sulcata” is transferred to Leucoinocybe and “Clitocybula atrialba” to Gerronema. The first European records of Megacollybia marginata are published.     

Mono- and sesquiterpenoids from Hydrocotyle and Centella species

Hydrocotyle sibthorpioides, H. maritima and Centella asiatica were investigated for their ter- penoid constituents. The major component of H. sibthorpioides and H. maritima is trans- β-farnesene. The latter species also elaborates α-terpinene and thymol methyl ether in respectable amount. The sesquiterpenoid constitution of C. asiatica is rather similar to H. maritima. Possible allelopathy between H. sibthorpioides and a liverwort is suggested.     

Revision ofMesorhyphus Handlirsch,Eoplecia Handlirsch andHeterorhyphus Bode (Diptera: Anisopodomorpha,Bibionomorpha) from the upper liassic of Germany

The holotypes of the Lower Jurassic DipteraMesorhyphus nanus Handlirsch 1920,M. areolatus Handlirsch 1939,M. anomalus Handlirsch 1939,Eoplecia primitiva Handlirsch 1920,Heterorhyphus latus Bode 1953,H. analivarius Bode 1953 andProtorhyphus (?)ovisimilis Bode 1953 were re-examined. The holotype ofEoplecia primitiva is the counterpart ofMesorhyphus areolatus. M. areolatus is a junior synonym ofM. nanus. Mesorrhyphoides Rohdendorf 1962 is a synonym ofHeterorhyphus Bode 1953.Heterorhyphus analivarius is a synonym ofProtorhyphus (?)ovisimilis, being mistakenly described from the counterpart of the holotype of the latter. The genusHeterorhyphus is valid and comprises onlyH. anomalus (Handlirsch 1939) n. comb.;H. latus is a synonym of the latter species. As the wing venation ofHeterorhyphus is conspicuously different from all fossil and Recent Anisopodomorpha, it is placed into a new family, Heterorhyphidae, within the Bibionomorpha.     

Review of the Palaearctic Acomopterella Zaitzev (Diptera,Sciaroidea, Mycetophilidae)

The distribution of Acomopterella species in the Palaearctic region has been re-examined in this study, using recently collected material. The European species was found to be distributed in the eastern Palaearctic as well. A second Palaearctic species from Honshu (Japan) is herein described. The morphology of adult specimens was studied by light microscopy and scanning electron microscopy. The shape of functional specialized setae on mid tibiae in Acomopterella and seven further fungus gnat genera is described and the suitability of this character for systematic studies is discussed. Details of a “hind tibial organ” are described.The position of Acomopterella in the tribe Gnoristini is briefly discussed. Acomopterella is found to be more closely related to Speolepta Edwards, 1925, than to any other recent genus.     

Sequence of a Lactococcus lactis DNA fragment homologous to the recF gene of Bacillus subtilis

The recF gene of Lactococcus lactis ATCC 7962 is located 3 kb downstream from the lacZ gene and is transcribed in the opposite orientation. The recF gene is immediately preceded by a 121-codon ORF, and both recF and orf121 may be transcribed from the same promoter. The deduced RecF amino-acid sequence shows high homology to that of the Bacillus subtilis and Streptococcus pyogenes RecF proteins     

The araC gene of Citrobacter freundii

The araC gene of Citrobacter freundii was cloned into plasmid pBR322 and expressed in Escherichia coli and Salmonella typhimurium. The nucleotide sequence and the predicted translational product were determined and compared to those of E. coli, S. typhimurium and Erwinia carotovora. The predicted translational product is 281 amino acids (aa) long, identical in size to that of S. typhimurium, and is 11 and 29 aa shorter than that of E. coli and E. carotovora, respectively. The nucleotide sequence of the araC gene of C. freundii is 83% homologous to the araC genes of both E. coli and S. typhimurium, but only 60% homologous to that of E. carotovora with respect to the regions they share. The predicted amino acid sequence is highly conserved and shows 96% and 94% homology to S. typhimurium and E. coli, respectively. E. carotovora shows only a 58% aa homology. The activator and autoregulatory activities of each plasmid encoded AraC protein in a S. typhimurium araC::lacZ protein fusion strain were examined.     

The genus Nomuraea Maublanc

The history of Spicaria rileyi (Farlow) Charles and Spicaria prasina (Maub.) Sawada is discussed. The genus Nomuraea is resurrected and Spicaria rileyi is transferred to that genus. Spicaria prasina is placed in synonomy with Nomuraea rileyi (Farlow) Samson.     

Molecular and morphological evolution in the Physciaceae (Lecanorales,lichenized Ascomycotina), with special emphasis on the genus Rinodina

Abstract:A phylogenetic hypothesis based on nuclear ITS sequence data is presented for the familyPhysciaceae , based on various representatives of foliose and fruticose groups and a number of species selected from the crustose genera Rinodina and Buellia s.l. The analysis supports the monophyly of the Physcia - and theBuellia -groups. This is in agreement with existing morphological evidence, particularly ascus characters. ThePhyscia group in the analysis includes the genera Anaptychia, Heterodermia, Hyperphyscia,Mobergia , Phaeophyscia, Phaeorrhiza, Physcia, Physconia, Rinodina, andRinodinella , while the Buellia group includes Amandinea, Buellia and Diploicia. The genera Physcia, Phaeophyscia, Phaeorrhiza and Rinodinella were well supported as monophyletic groups. The support for Physconia is low. Rinodina and Buellia are not supported as monophyletic genera. In agreement with ascus and ascospore characters, Buellia lindingeri is placed within the Rinodina group, close to R. lecanorina. The genus Amandinea as currently circumscribed was not supported as a monophyletic group. The analysis confirms results from other lichen families that foliose members have evolved more than once from crustose lichens.Rinodina and Rinodinella species without chemical compounds in their thalli form the sister group toPhaeophyscia , and both groups form a monophyletic assemblage. A more detailed analysis of the Physcia group is presented. Whilst several of the foliose genera were well supported, there is only poor support for traditionally accepted crustose genera. The taxonomic implications of these findings are discussed.     

Phylogeny of the Augochlora clade with the description of four new species (Hymenoptera,Apoidea)

The Augochlora clade includes four genera: Augochlora Smith, Augochlorella Sandhouse, Ceratalictus Moure, and Pereirapis Moure. This is one of the richest and most widespread groups of Augochlorini bees. There are about 150 species, which occur from Argentina to Canada. The species of Augochlora clade are considered solitary to facultatively social, except Ceratalictus for which nothing is known. Wood nesting behavior arose once in the clade, in Augochlora sensu strictu. The objective of this study is to describe four new species and to present a revised phylogenetic analysis of the Augochlora clade for the placement of these species. The morphological matrix comprised 77 characters and 42 terminals, and resulted in two most parsimonious trees. The monophyly of the Augochlora clade is corroborated. Ceratalictus and Pereirapis are considered as sister groups and Ceratalictus inflexus sp. nov. came as sister to other species of Ceratalictus. Augochlora and Augochlorella are monophyletic and sister groups. Both extant subgenera of Augochlora were corroborated as monophyletic. Augochlorella comis is considered as sister group to the rest of Augochlorella species. All Augochlorella new species described belong to the Augochlorella ephyra group. Augochlorella kelliae sp. nov. is phylogenetically related to Augochlorella una. Augochlorella procliva sp. nov. and Augochlorella mavricera sp. nov. constitute a clade with Augochlorella acarinata. Including the new species, Augochlorella has 19 species and Ceratalictus 11 species. A revised key for species of Augochlorella and Ceratalictus is also presented in the Supplementary Information.     

Two aberrant mercury resistance transposons in the Pseudomonas stutzeri plasmid pPB

The two mer operons of the Pseudomonas stutzeri OX plasmid pPB and their flanking regions have been sequenced and found to be part of two aberrant transposons. The narrow spectrum mer operon is almost identical to that of Tn501, but is associated with the remnants of Tn5053 tni genes rather than the Tn501 transposition module. The broad spectrum mer operon shows an overall homology with that of Tn5053, but differs from it in the presence of a merB gene, absent in Tn5053, and a merC gene instead of a merF. The pPB broad spectrum mer operon is associated with an incomplete Tn5053-like transposition module and with the Tn501 tnp genes, which are proximal, respectively, to the end and to the beginning of the mer operon. A hypothesis about pPB evolution is presented.     

Redescription ofHypoatherina valenciennei and its relationships to other species of Atherinidae in the pacific and Indian Oceans

A review of Tirant’s collections and examination of types has resulted in the reidentification ofHaplocheilus argyrotaenia Tirant asHypoatherina valenciennei (Bleeker) which is found throughout the southwestern Pacific and as far north as Japan. The taxonomic status ofH. valenciennei is clarified and Bleeker’s emendation of the original specific epithetvalenciennei tovalenciennesi is rejected. The systematic position of this species is difficult to determine sinceH. valenciennei shows affinities with bothHypoatherina andAtherinomorus. In the light of the present knowledge, Bleeker’s species appears to have greater affinities withHypoatherina and is therefore placed in this genus.     

Interaction among C, R and Vp in the Control of the Bz Glucosyltransferase during Endosperm Development in Maize

The enzyme UPD glucose: flavonoid 3-O-glucosyltransferase (UFGT), involved in anthocyanin biosynthesis, is controlled by at least four genes (Bz, C, R and Vp) in the maize endosperm. Bz is the structural gene for the enzyme. Early in endosperm development, the enzyme is present in an uninduced low level that is independent of C, R and Vp, and dependent solely on Bz. Beginning at about the fourth week of development, C, R and Vp interact with each other to induce high levels of UFGT. The enzyme accumulates thereafter in normal endosperms, reaching its highest level at maturity. The nature of the developmental signal (s) controlled by C, R and Vp is discussed.