Devonian conodont biogeography: Quantitative analysis of provinciality

Cluster analysis of conodont faunas from each of 17 Lower‐lower Upper Devonian zones and subzones (data as reported by Klapper and Johnson, 1980) reveal changing patterns of provinciality.

Provinciality, expressed by a differentiation into western Laurussian and proto‐Tethyan biogeographic regions, is moderate in the lower Lochkovian but is low or absent in the upper Lochkovian‐lower Pragian. Provincialism returns in the Pragian and reaches its maximum development during the Emsian. Most Australian faunas are distinct from those of western Laurussia and the proto‐Tethys. Conodont faunas from suspect terranes of western North America display no unusual biogeographic affinities. Provincialism declines during the Eifelian and is only weakly developed in Givetian‐lower Frasnian faunas.

Changing global sea level during the Devonian may explain the development of Devonian conodont provinciality. As proposed by Klapper and Johnson (1980), low provinciality is associated with low stands of sea level. Endemic faunas develop in isolated epeiric seas during intermediate stages of sea level rise. High stands of sea level ultimately drown barriers to faunal exchange and prompt a return to low provinciality conditions.     

Quantitative and qualitative assessment of pollen DNA metabarcoding using constructed species mixtures

Pollen DNA metabarcoding—marker‐based genetic identification of potentially mixed‐species pollen samples—has applications across a variety of fields. While basic species‐level pollen identification using standard DNA barcode markers is established, the extent to which metabarcoding (a) correctly assigns species identities to mixes (qualitative matching) and (b) generates sequence reads proportionally to their relative abundance in a sample (quantitative matching) is unclear, as these have not been assessed relative to known standards. We tested the quantitative and qualitative robustness of metabarcoding in constructed pollen mixtures varying in species richness (1–9 species), taxonomic relatedness (within genera to across class) and rarity (5%–100% of grains), using Illumina MiSeq with the markers rbcL and ITS2. Qualitatively, species composition determinations were largely correct, but false positives and negatives occurred. False negatives were typically driven by lack of a barcode gap or rarity in a sample. Species richness and taxonomic relatedness, however, did not strongly impact correct determinations. False positives were likely driven by contamination, chimeric sequences and/or misidentification by the bioinformatics pipeline. Quantitatively, the proportion of reads for each species was only weakly correlated with its relative abundance, in contrast to suggestions from some other studies. Quantitative mismatches are not correctable by consistent scaling factors, but instead are context‐dependent on the other species present in a sample. Together, our results show that metabarcoding is largely robust for determining pollen presence/absence but that sequence reads should not be used to infer relative abundance of pollen grains.     

Geometric shell growth and mode of life of a Devonian chonetoidean brachiopod

Morphological and statistical analysis of the chonetoid species Kentronetes variabilis from the Lower Devonian (Lochkovian) of the Argentine Precordillera demonstrate ontogenetic changes and allometric relationships between characters. A special study was made of spine distribution, morphology, and growth, compared to valve growth. The first, inner, developed spines (pairs 1–1'and 2–2') continued to grow after development of the following outer pairs. The spacing of spines, their diameter, and the density of growth rings vary from beak to posterolateral margins following a specific 2ⁿ geometric growth factor, compared to the regular, almost linear growth of the valves, attested by growth lines. The linear growth rate of outer spines (pairs 3–3'and 4–4') can be 6–8 times more rapid than that of the shell on the valve margin. Ontogenetic changes in spine morphology are interpreted as a response to changes in the mode of life.     

Lower Devonian brachiopod communities of the northern Canadian Cordillera

The northern Canadian Cordillera can be divided into three more or less parallel arrayed lithofacies, which from east to west correspond to progrcssively deepening waters. The shallow water, yellow, or orange-weathering carbonates occupy essentially the eastern half of the region and northwestern Yukon. Shallowest water carbonates yield fairly abundant ostracodem faunas, ostracodes, and little else. Slightly deeper water carbonates contain brachiopod faunas rich in individuals but low in generic diversity. The name Howellella-Protathyris Community is applied to the Lower Lochkovian shallow water faunas: the Sieberella-Nymphorhynchia-Athyrhynchus Community is the approximate Upper Pragian-Zlichovian equivalent. Deep water calcareous shales and limestones occupy a narrow band and yield faunas rich both in number and diversity. These faunas are designated the Skenidioides-Spirigerina-Vagrania Community and are recognized through the entire Lower Devonian interval. An intermediate depth fauna from Upper Pragian and Zlichovian dark carbonates is probably recognizable in northwestern Yukon, and termed the Strophochonetes-Proreticularia- receptaculitid Community. The widespread deep water graptolitic shales and carbonates contain a rich fauna of graptolites and relatively rare trilobite, sponge, and brachiopod faunas.     

银缕梅物种濒危度的定量分析

采用二级模糊综合评判法进一步分析现存个体和居群数均极少的中国金缕梅科一新属种──银缕梅的物种濒危度。首先挑选对小种群绝灭有影响的随机干扰因素,建立了包括２０个评价指标在内的因素集。然后通过对评价指标定量化和权分配一系列处理,并通过最初一、二层的综合评判,求得濒危度和保护等级,进而确定物种的濒危状态及其在省级和国家级的保护序次。研究结果表明,二级模糊综合评判的方法十分灵敏,可操作性强,它能比较准确地反映植物物种实际濒危状况。     

Sampling effort and species richness assessment: a case study on Brazilian spiders

The knowledge on the geographical distribution of species is essential for building biogeographical and macroecological hypotheses. However, information on this regard is not distributed uniformly in space and usually come from biased sampling. The aim of this study is to quantify the influence of spatial distribution of sampling effort on the assessment of spider species richness in Brazil. We used a database of spider distribution records in Brazil, based on the taxonomic and biodiversity survey literature. The results show that the Atlantic Forest was better sampled and had the highest spider species richness among the Brazilian biomes. The Amazon, though having large collecting gaps and high concentration of records around major cities and rivers, showed the second highest number of species. The Pampa had a large number of records, but these are concentrated near a major city in the transition zone with the Atlantic Forest. The Cerrado, Caatinga and Pantanal had shown to be poorly sampled and, consequently, were among the lesser known biomes regarding the spider fauna. A linear regression analysis showed that the spider species richness in Brazil is strongly correlated to the number of records. However, we have identified areas potentially richest in species, which strongly deviate from the predicted by our analyses. Our results show that it is possible to access the spatial variation in species richness, as long as the variation in sampling effort is taken into account.     

Level-bottom brachiopod communities in the Middle Devonian of New York

Depositional environments of the Onondaga Limestone from central to southeastern New York are found to be normal, subtidal marine, due to the absence of characteristic supratidal or intertidal sedimentary features and the presence of a typical, diverse, marine level-bottom community framework. Post-mortem transport has not been extensive, as evidenced by low articulation ratios, lack of abraded valves, and complete ontogenetic gradations within species, which precludes large scale winnowing. Sedimentation rates appear to have been greatest in eastern New York where the Onondaga Limestone reaches a thickness almost three times that of the strata in central New York. Shaly beds in the central area represent periods of cessation of carbonate deposition rather than an influx of clastic material. Deposition terminated with the onset of deeper water characterized by a westerly advance of terrigenous sedimentation (the Marceilus Shale of the Hamilton Group). Nine brachiopod communities can be recognized in the Onondaga Limestone. There is a strong correlation between sediment-substrate and community type, reflecting the sedimentologic control of brachiopod community distribution. Sandy facies, cherty limestones and coral biostromes and bioherms are associated with inner-neritic deposition in Edgecliff time; argillaceous lime muds and lime sands are characteristic of mid-neritic deposition in Nedrow to Moorehouse time; and highly argillaceous lime muds are associated with outer-nerittc deposition in Seneca time.     

Ancient animal migration: a case study of eyeless,dimorphic Devonian trilobites from Poland

We report evidence of one of the oldest known animal migratory episodes in the form of queues of the eyeless trilobite Trimerocephalus chopini Kin & B?a?ejowski, from the Late Devonian (Famennian) of central Poland. In addition, there is evidence for two morphs in this population, one with nine segments and the other with ten. We infer that these queues represent mass migratory chains coordinated by chemotaxis, comparable to those observed in modern crustaceans such as spiny lobsters, and further suggest that the two forms, which occur in an approximately 1:1 ratio, may be dimorphs. These ancient arthropods may have migrated periodically to shallow marine areas for mass mating and spawning. The sudden death of the trilobites in the queues may have been caused by excess carbon dioxide and hydrogen sulphide introduced into the bottom water by distal storm disturbance of anoxic sediments. This study demonstrates the potential for further research on the evolution and ecology of aggregative behaviour in marine arthropods.     

城市森林结构的量化研究——以沈阳树木园森林群落为例

采用遥感图像判读和野外调查相结合的方法,定量分析了沈阳树木园植物群落的物种结构及空间格局。结果表明,沈阳树木园植被的生长状况良好;物种丰富,其中黄蘖(Phellodendron amugense)、刺槐(Robinia pseudoacacia)、榆树(Ulmus pumila)在树木株数和相对优势度上均占优势,为群落的主林木;植被在高度和胸径上的分布均表现为具有向上发展的潜力,整个植被群落正处于一个快速的生长期,属于发挥生态效益的最佳时期,沈阳树木园的树种多度与基于叶面积的相对优势度之间无明显关联,数量上占优势的树种,其相对优势度不一定很高,沈阳树木园植被树木株数与不同树高等级间的分布关系表现为上凸的曲线,随着树木高度级的增加,树木株数开始分布比较平稳,当高度超过12m后,树木株数明显减少,曲线急骤下降,树木株数分布与不同胸径等级间的关系也呈现类似的情况。     

Quantitative genetics: a promising approach for the assessment of genetic variation in endangered species

The measurement of genetic variation is often an important component of endangered species management programs. Each of several tools available to measure genetic diversity has positive and negative attributes. Quantitative genetic techniques have not received much attention in the conservation field, yet they are likely to reveal variation that is most closely associated with components of fitness. In addition, quantitative genetics may not be as logistically difficult for threatened populations as was once thought. Finally, quantitative genetic models provide a better outlook for conservation programs than single-locus models.     

Discussion of the Early Devonian rhynchonellid brachiopod genus Borealirhynchia Su, 1976

The Early Devonian brachiopod genus Borealirhynchia was established by Su, 1976. Phylum Brachiopoda (Cambrian to Devonian). In: Paleontological Atlas of North China, Inner Mongolia Volume 1. Geological Publishing House Beijing, pp. 155-227 (in Chinese). It has not been previously described in detail, nor have transverse serial sections of the internal features of Borealirhynchia delerensis, the type species, been published. In this paper Borealirhynchia, along with a few species previously assigned to it, is analysed and discussed. Detailed transverse serial sections of the internal features of B.? lata Su, 1976, are provided, based on well-preserved specimens collected from the Lower Devonian strata of Dong Ujimqin Qi, northeastern Inner Mongolia. Borealirhynchia? gigantea Su, 1976 and Latonotoechia multicosta Su, 1976 are considered to be synonyms of B.? lata Su with the same external and internal characters present in all three species. Some Lower Devonian strata, in which Borealirhynchia was found and reported, from Dong Ujimqin Qi, northeastern Inner Mongolia, are fully described.     

Integrating cost-benefits analysis and life cycle assessment of green roofs: a case study in Florida

Abstract

Multiple environmental benefits can be achieved by using a green roof instead of conventional roofs. To better understand the LCA and cost-effectiveness of a green roof, a case study was performed. Two energy models, one with conventional white roof and the other with green roof, were created using eQUEST software to compare the influence of green roof on building energy consumption. The results indicated that the application of a green roof reduced annual space heating and cooling electricity consumption by 9500 kWh (2.2 kWh per square meter). The LCA shows that by using an extensive green roof in lieu of a conventional white roof the LCA measures at the product, construction, and end-of-life stages increased due to the use of additional layers. However, these increases are offset by the reduction of LCA measures at the use stage such that the overall environmental impacts of green roof is less than that of conventional roof. To find out the cost-effectiveness of green roof, a 50-year cost-benefits analysis was conducted. The analysis showed that the net savings of the green roof is negative compared to the white roof it replaced due to its higher initial cost and follow on maintenance cost.     

Quantitative assessment of cell damagein situ: Electron microprobe X-ray analysis of model organisms treated with noxious species

The existing set of methods for assessing toxicity of noxas, based on experiments with whole animals (subclinical toxicity, toxicokinetics, carcinogenity, teratogenity, neurotoxicologyetc.) does not provide much information about cellular and subcellular effects such compounds may exert. We suggest to complement the current methodology by combining a traditional morphological observation in an electron microscope with a spectroscopic method of electron microprobe X-ray analysis (or X-ray microanalysis). The latter makes it possible to measure concentrations of chemical elements in invidividual cells and organelles and effects of noxas can thus be assessed (i) at subcellular level, (ii) directlyin situ and (iii) quantitatively. Concentrations of biologically important elements such as phosphorus, sulfur or zinc were measured in individual organelles in both intact and noxa-treated tissues, thus offering a possibility of comparing the effects of various noxious species at subcellular level (with the noxa previously applied to whole tissue or animal). The suggested correlation of analytical and morphological information may also provide new insights into cellular targeting of noxas (and potentially also drugs) as some organelles appear to be much more susceptible to damage than others. Presented at the 4th Mini-Symposium on Biosorption and Microbial Degradation, Prague, Czech Republic, November 26–29, 1996.     

Quantitative and qualitative assessment of microbial aerosols in different indoor environments of a dental school clinic

Aerobiologia - In the indoor environment of dental clinics, dental staff and patients are exposed to various types of infectious agents transported by aerosols and particles, generated during...     

Community nurse assessment of cardiovascular behavioural risk factors--a qualitative analysis within the CroHort study

The aim of our study was to identify major determinants of cardiovascular behavioural risk factors among subjects at increased risk of cardiovascular disease (CVD). The data for the qualitative analysis were obtained from the Croatian Adult Health Cohort Study (CroHort). The data analysis was based on the principles of Grounded Theory. We have generated the concept of an individual in a vicious circle of risky health behaviour, defined by the low level of motivation and unfavourable personal characteristics which in interaction with unsupportive social environment adversely influence one's health behaviour, leading to negative health outcomes that produce negative effects on one's motivation and social environment. Community nurses assessed that the respondents often weren't adequately recognising their CVD risk and were very reluctant about the change in their risky habits. Our results are supported by the quantitative analysis and are complementing other analyses of the cardiovascular risks within the CroHort study.     

A sensitivity analysis to methodological variation in indicator-based urban sustainability assessment: a Quebec case study

Methodological factors are often acknowledged for their impact on the urban sustainability assessment outcomes. The significance of this impact, however, divides those who assign it great importance; to the point of compromising any attempt at sustainability benchmarking using indicators, from those who regard it as having a relatively limited role. In this paper, we aim to contribute to this debate by assessing how methodological choices could influence the variation in the outcomes of indicator-based urban sustainability benchmarking. The paper starts with a literature review outlining the evolution of the approaches adopted since the pioneering experiences in the ‘90s to show a convergence in indicators and data over time. Subsequently, by using the data of the 25 most populous cities in Quebec, we empirically analyse the sensitivity of the cities’ sustainability scores to 18 combinations of estimation techniques, and observe consistency within the outcomes while maintaining general patterns regardless of the approach used. The results suggest that methodological choices play a limited role in the urban sustainability assessment outcomes. Thus, other determinants beyond the evaluation methods are most likely involved and therefore should be a major focus in future research agendas.