Enantioselective hydrolysis of racemic methyl jasmonate using microorganisms and isolated enzymes

A variety of microorganisms were used to hydrolyze racemic methyl jasmonate [I] with varying degrees of enantioselectivity. The fungi tested included species from the genera Aspergillus, Penicillium, and Talaromyces. All fungi tested showed a preference for the [1S,2S(Z)]-(+)-isomer. The yeasts Saccharomyces cerevisiae and Candida albicans showed no activity. A number of bacterial genera were also tested. No activity could be shown for members of the genera Bacillus, Pseudomonas, Escherichia, Nocardia, and Thermoactinomyces. Hydrolytic activity was found in the genera Streptomyces and Mycobacterium. S. henetus showed the same enantioselectivity as the fungi, while M. phlei hydrolyzed the [1R,2R(Z)]-(−)-isomer preferentially. A number of isolated enzymes were also screened for activity. Varying degrees of hydrolytic activity and enantioselectivity were found.     

Effects of sabinene and γ-terpinene from coastal redwood leaves acting singly or in mixtures on the growth of some of their fungus endophytes

Sabinene and γ-terpinene were assayed in vitro acting singly or in mixtures in the gaseous state on the following redwood endophytes: Botrytis cinerea, Cryptosporiopsis abietina, Pestalotiopsis funerea, Phomopsis occulta, Pleuroplaconema sp. and Seiridium juniperi. The hypothesis that these redwood monoterpenes were acting additively or synergistically in inhibiting the growth on leaf endophytes was tested. Dose-response curves were obtained for each endophyte growing under five concentrations of both sabinene and γ-terpinene. Three mixtures of different ratios were assayed keeping constant 0.25 mg of monoterpenes per ml air. Either acting singly or in mixtures sabinene and γ-terpinene were inhibitory to all fungi, but their effect varied according to species. Both compounds had similar effects acting singly on each endophyte with doses from 0.0625 to 0.25 mg ml air⁻¹. With doses of 1.6667 mg ml air⁻¹ of either monoterpene, S. juniperi was mildly inhibited by sabinene and strongly inhibited by γ-terpinene, but other species were strongly and equally inhibited by both compounds. Sabinene: γ-terpinene mixtures of 1:3, 1:1 and 3:1 ratios were equally inhibitory for each species. Results suggest that when these compounds co-occur, they act additively on leaf endophytic fungi.     

The pharmaceutical exploration of cold water ascidians from the Netherlands: a possible source of new cytotoxic natural products

Six ascidian species from the Dutch North Sea coast were screened for cytotoxic activity. Freeze-dried biological material was extracted with solvents of different polarity followed by determination of the cytotoxicity. The most active extracts were further separated using different chromatographic techniques. The microculture tetrazolium (MTT) assay was used to determine the cytotoxicity against two human tumor cell lines: COLO₃₂₀ (a colon adenocarcinoma) and GLC₄ (a small cell lung carcinoma). The two cell lines were selected for their different response towards known cytostatics. GLC₄ is sensitive and COLO₃₂₀ is resistant to most of the known cytostatics. Three of the species tested yielded interesting fractions. From the in colonial Didemnum lahillei we have isolated a compound which is more active against the COLO₃₂₀ cell line (IC₅₀:33 μg ml⁻¹) than the GLC₄ (IC₅₀:49 μg ml⁻¹). The structure is currently elucidated. Another colonial species, Aplidium glabrum, yielded a very cytotoxic fraction, with an IC₅₀ of 5 μg ml⁻¹ against the COLO₃₂₀ cell line. From our results it can be concluded that the North Sea could be another interesting source of new compounds with pharmaceutical potential.     

野生鸡油菌子实体可培养微生物多样性及其功能分析

采用多种培养基对采自贵州省贵阳市3个样地的鸡油菌Cantharellus cibarius子实体内细菌和真菌进行分离、培养、鉴定和多样性分析.利用FAPROTAX和FUNGuild数据库分别对其功能类群进行注释,从而探究微生物群对鸡油菌生长发育的影响.结果 表明,鸡油菌子实体内共分离获得细菌49株,分属于2门、4纲、6...     

Biotransformation of monoterpenoids, (−)- and menthols, terpinolene and carvotanacetone by Aspergillus species

Four monoterpenoids, (−)- and (+)-menthols, terpinolene and carvotanacetone were biotransformed by Aspergillus niger and several related species. Aspergillus niger converted (−)-menthol to 1-, 2-, 6-, 7-, and 9-hydroxymenthols and the mosquito repellent-active 8-hydroxymenthol. On the other hand, (+)-menthol was smoothly biotransformed by A. niger to give 7-hydroxymenthol. Aspergillus cellulosae biotransformed (−)-menthol specifically to 4-hydroxymenthol. Terpinolene and (−)-carvotanacetone were converted by A. niger to two , β-unsaturated ketones, a fenchane-type compound and diastereoisomeric p-menthane-2,9-diols and 8-hydroxycarvomenthol, respectively.     

Effects of sulfur dioxide on the development of powdery mildew of cucumber

Environment is a major factor that does influence host parasite relationships. Air pollution caused by SO₂ may directly alter the environment around the plant and pathogen. It is hypothesised that plants may respond differently to foliar pathogens in air polluted environments. To test this hypothesis, effects of intermittent exposures of SO₂ at 143, 286 and 571 μg m⁻³ were investigated on the development of powdery mildew of cucumber (Cucumis sativa) caused by Sphaerotheca fuliginea, using pre-, post- and concomitant-inoculation exposures in closed-top chambers. Sulfur dioxide (except 143 μg m⁻³) and the fungus acting alone caused chlorosis and/or necrosis, and mildew colonies on leaves, respectively and both reduced the plant growth and yield of cucumber. Fungus colonization was relatively greater on the plants exposed to 143 μg SO₂ m⁻³, but at the higher concentrations, the colonies were greatly suppressed. Gas injury on fungus-infected plants was also less in the other treatments. Conidia of S. fuliginea collected from exposed plants varied in size. Conidial germination was considerably greater at 143 μg SO₂ m⁻³. This concentration also promoted germination of the conidia exposed on glass slides. Higher concentrations (286 and 571 μg m⁻³), however, suppressed the germination of conidia from exposed plants or exposed on glass slides. The number of fibrosin bodies declined at all the concentrations. Synergistic effects of 143 μg SO₂ m⁻³ and S. fuliginea were recorded on plant growth and yield of cucumber. Sulfur dioxide at 571 μg m⁻³ and powdery mildew infection had an antagonistic effect on plant growth.     

Characterization of antioxidant and antiglycation properties and isolation of active ingredients from traditional chinese medicines

There is considerable interest in the isolation of more potent antioxidant compounds to treat diseases involving oxidative stress. Thirty-three traditional Chinese medicine (TCM) extracts were examined for their antioxidant activity using the 2,2′-azinobis[3-ethylbenzothiazoline-6-sulfonate] (ABTS) assay. Five extracts with high activity (Cratoxylum cochinchinense, Cortex magnoliae officinalis, Psoralea corylifolia L, Curculigo orchioides Gaertn, and Glycyrrhiza uralensis Fisch.) were selected for further characterization. C. cochinchinense outperformed other extracts in most of the assays tested except phospholipid peroxidation inhibition, where P. corylifolia L showed higher activity. C. cochinchinense was particularly potent in inhibiting the formation of advanced glycation end products on proteins and strongly inhibited hypochlorous acid-induced DNA damage. We attempted to isolate the active ingredients from C. cochinchinense and obtained an extract (YCT) containing at least 90% mangiferin as identified by HPLC and mass spectrometry. However, YCT showed significantly higher activity in assays of phospholipid peroxidation, inhibition of protein glycation, and superoxide (O₂^√−) and peroxynitrite (ONOO⁻) scavenging, as compared with mangiferin, suggesting that the nonmangiferin constituents of YCT contribute to its additional antioxidant activities.     

Partial purification and characterization of NADH-glutamate synthase from faba bean (Vicia faba) root nodules

The NADH-dependent glutamate synthase (EC 1.4.1.14) from the plant fraction of N₂-fixing faba bean (Vicia faba) nodules has been purified 74-fold to a specific activity of about 3 μmol min⁻¹ mg protein⁻¹ with a final yield of 32%. The NADH-GOGAT activity was associated with a single form of the enzyme that behaved as a monomeric protein with a subunit molecular weight of 195 kDa and a native molecular weight from 222 to 236 kDa estimated by gel filtration or PAGE, respectively. The NADH-GOGAT band on SDS-PAGE was cut out and used to produce antibodies. Western blots of SDS-PAGE of crude nodule proteins revealed a 195 kDa polypeptide in root extracts but not in those of leaves or bacteroids. The antiserum also cross-reacted with a polypeptide of camparable molecular weight (195 kDa) from both amide and ureide transporting species legume nodules, indicating that some antigenic epitopes have been conserved between nodule NADH-GOGAT of different species.     

三叶鬼针草与不同本地植物竞争对土壤 微生物和土壤养分的影响

入侵植物三叶鬼针草(Bidens pilosa)对我国农牧业生产造成了重大的损失。本文主要研究三叶鬼针草入侵与不同本地植物竞争对土壤微生物群落结构和土壤养分的影响。利用磷脂脂肪酸方法(phospholipid fatty acids, PLFAs)测定土壤微生物群落组成, 同时测定土壤养分和酶活性, 并利用Canoco4.5软件分析了土壤微生物、土壤养分和土壤酶活性的相关性。结果表明: (1)三叶鬼针草对革兰氏阳性菌、革兰氏阴性菌、丛枝菌根真菌等土壤微生物具有较强的聚集能力, 且其根际土壤聚集的微生物类群与本地植物种类密切相关。(2)三叶鬼针草入侵显著增加了入侵地土壤的有机碳含量, 降低了铵态氮的含量; 土壤中的速效钾、速效磷和硝态氮的含量则与本地植物种类密切相关。(3)相关性分析表明, 16:00和16:1 ω5c对铵态氮的含量影响较大, 而三叶鬼针草入侵地16:00和16:1 ω5c的含量显著高于裸土对照, 进而推测这一状况导致了铵态氮含量的降低。(4) 15:1 anteiso A和18:1 ω5c与速效钾的含量呈显著正相关, 而其含量在狗尾草(Setaria viridis)中显著高于其他处理, 三叶鬼针草与狗尾草混种处理中土壤中速效钾的含量高于其他处理。以上结果说明, 三叶鬼针草通过改变土壤微生物群落结构影响了土壤酶活性和土壤养分, 且这种改变与入侵地本地植物种类有关。     

Cloning and identification of the promoter of the tobacco Sar8.2b gene,a gene involved in systemic acquired resistance

Expression of the Sar8.2 gene family is induced by salicylic acid (SA) in tobacco during induction of systemic acquired resistance. Expression of Sar8.2b, one member of this 12-member family, was detected as early as 12 h after treatment with SA and was maximal 36 h after SA treatment. In NahG transgenic tobacco plants, benzothiadiazole and dichloroisonicotinic acid induced expression of Sar8.2b but SA did not, suggesting that expression of the Sar8.2b gene is SA-dependent. Several putative cis-acting elements were found in the Sar8.2b gene promoter region, including an as-1 element and GT-1 and Dof binding sequences. We constructed a series of progressive deletion mutations in the Sar8.2b promoter region linked to the β-glucuronidase (GUS) coding region and analyzed GUS activities by stable expression in transformants of Arabidopsis thaliana. Deletions between −728 and −927 bp or between −351 and −197 bp of the promoter region resulted in a significant reduction in GUS activity induced by SA treatment as shown in stable transformants of A. thaliana. The −197 bp fragment of the promoter region was found to confer a relatively low level of GUS activity induced by SA treatment in stable expression of transformants in A. thaliana. The results suggest that 927 bp of the Sar8.2b gene promoter confers full promoter activity and that cis-acting elements required for high-level SA-inducible expression of the Sar8.2b gene may exist within the regions −728 to −927 bp and −197 to −351 bp.     

Isolation and characterization of a novel thermostable non-specific lipid transfer protein-like antimicrobial protein from motherwort (Leonurus japonicus Houtt) seeds

In screening for potent antimicrobial proteins from plant seeds, a novel heat-stable antimicrobial protein, designated LJAMP2, was purified from seeds of the motherwort (Leonurus japonicus Houtt), a medicine herb, with a procedure involving cation exchange chromatography on a CM FF column, and reverse phase HPLCs on C8 column and C18 column. LJAMP2 exhibited a molecular mass of 6.2 kDa determined. Automated Edman degradation determined the partial N-terminal sequence of LJAMP2 to be NH2-AIGCNTVASKMAPCLPYVTGKGPLGGCCGGVKGLIDAARTTPDRQAVCNCLKTLAKSYSG, which displays homology with plant non-specific lipid transfer proteins (nsLTPs). In vitro bioassays showed that LJAMP2 inhibits the growth of a variety of microbes, including filamentous fungi, bacteria and yeast. The growth of three phytopathogenic fungi, Alternaria brassicae, Botrytis maydis, and Rhizoctonia cerealis, are inhibited at 7.5 μM of LJAMP2, whereas Bacillus subtilis is about 15 μM. The IC₅₀ of LJAMP2 for Aspergillus niger, B. maydis, Fusarium oxysporum, Penicillium digitatum and Saccharomyces cerevisiae are 5.5, 6.1, 9.3, 40.0, and 76.0 μM, respectively.     

Enhancement of growth and gymnodimine production by the marine dinoflagellate, Karenia selliformis

Because of its novel bioactive properties the production of gymnodimine for use as a pharmaceutical precursor has aroused interest. The dinoflagellate, Karenia selliformis produces gymnodimine when grown in bulk culture using GP + selenium medium but the growth rates (μ) and levels of gymnodimine are low (μ, 0.05 days⁻¹; gymnodimine 250 μg L⁻¹ max). We describe the effects of organic acid additions (acetate, glycolate, alanine and glutamate additions and combinations of these) in enhancing growth and gymnodimine production in axenic cultures. The most effective organic acid combinations in decreasing order were: glycolate/alanine > acetate > glycolate. Glycolate/alanine optimised gymnodimine production by prolonging growth (maximum cell yield, 1.76 × 10⁵ cells mL⁻¹; gymnodimine, 1260 μg L⁻¹; growth rate (μ), 0.2 days⁻¹) compared to the control (growth maximum cell yield, 7.8 × 10⁴ cells mL⁻¹; gymnodimine, 780 μg L⁻¹; μ, 0.17 days⁻¹). Acetate enhanced gymnodimine by stimulating growth rate (μ, 0.23 days⁻¹) and the large concentration of gymnodimine per cell (16 pg cell⁻¹ cf. 9.8 pg cell⁻¹ for the control) suggests a role for this compound in gymnodimine biosynthesis. Amending culture media with Mn²⁺ additions resulted in slightly decreased growth in control cultures and increased the gymnodimine while in glycolate/alanine cultures growth was stimulated but gymnodimine production decreased. The results suggest that the organic acid can enhance gymnodimine production by either enhancing growth maximum or the biosynthetic pathway.     

Phenolics and antimicrobial activity of traditional stoned table olives 'alcaparra'

In the present work, we report the determination of phenolic compounds in ‘alcaparra’ table olives by reversed-phase HPLC/DAD, and the evaluation of their extract in vitro activity against several microorganisms that may be causal agents of human intestinal and respiratory tract infections, namely Gram positive (Bacillus cereus, Bacillus subtilis, and Staphylococcus aureus), Gram negative bacteria (Pseudomonas aeruginosa, Escherichia coli, and Klebsiella pneumoniae) and fungi (Candida albicans and Cryptococcus neoformans). Three flavonoidic compounds were identified and quantified: luteolin 7-O-glucoside, apigenin 7-O-glucoside, and luteolin. At low concentrations (0.05 mg/mL) ‘alcaparra’ extract revealed significant inhibition of both Gram positive and Gram negative bacteria growth, with exception of P. aeruginosa. Nevertheless, no antifungal activity was observed at the tested concentrations.     

Ranking of forest growth factors

A ranking of growth factors was based on the hypothesis that the more important the factor the greater the negative correlation between it and the sum of the other factors. The correlation was calculated using tolerance scales for the southern boundary of forests in Eastern Europe. It was shown that light should be considered as the most important factor (r = −0.68), meaning that the effort expended by tree species to adapt to the deficiency of light was greater than the effort to adapt to other factors. The next in importance were soil moisture (r = −0.35), heat (r = −0.24), and soil fertility (r = −0.19).     

Growth and photosynthesis of Hydrocotyle ranunculoides L. fil. in Central Europe

Floating Pennywort (Hydrocotyle ranunculoides L. fil.) is a worldwide distributed aquatic plant. The species is native to North America and quite common also in Central and South America. In Europe, Japan and Australia it is known as an alien plant, sometimes causing serious problems for affected ecosystems and human use of water bodies. Starting from Western Europe with an eastwards directed spread, Floating Pennywort was recorded in Germany in 2004 for the first time. Since then, the species spread out and got established in western parts of Central Europe. For a definite prediction of the potential of a further spread, data about biology, in particular growth and photosynthesis are needed. Here, regeneration capacity, growth at different nutrient availabilities and photosynthesis of H. ranunculoides were investigated. In addition biomass samples were taken in the field. Results show an enormous regeneration capacity (e.g., by forming new shoots from small shoot fragments), increasing growth rates under increasing nutrient availability and a maximum increase of biomass reaching 0.132±0.008 g g⁻¹ dw d⁻¹. Dense populations of H. ranunculoides growing in ponds and oxbows were found at high nutrient content of the substrate, the biomass reaching there up to 532.4±14.2 g dw m⁻². Gas exchange analysis showed a physiological optimum of H. ranunculoides CO₂ uptake at temperatures between 25 and 35 °C and high photon flux densities (PPFD) above 800 μmol photons m⁻² s⁻¹. In comparison, native Hydrocotyle vulgaris showed an optimum of net photosynthesis at 20–30 °C and a light saturation of CO₂ gas exchange at 350 μmol photons m⁻² s⁻¹.     

海南热带雨林国家公园不同植被类型的大型真菌多样性

为揭示海南热带雨林国家公园大型真菌多样性及不同植被类型对真菌群落的影响, 本研究于2020年和2021年湿季对海南热带雨林国家公园内7个管理局辖区开展了大型真菌多样性调查, 比较了不同植被类型(山地雨林、低地雨林、低地雨林次生林、人工林)的大型真菌生活型(共生型、腐生型)组成差异。从设置的58条1 km长的样带内采集到1,869份子实体标本, 根据子实体形态与ITS rDNA序列分析, 从中鉴定出562种真菌, 涉及17目64科174属, 其中80%以上的物种由伞菌目、牛肝菌目、红菇目、多孔菌目、鸡油菌目、锈革孔菌目和炭角菌目构成。大型真菌的营养型以腐生型(占48.2%物种)和共生型(44.8%)为主。每条样带的平均物种丰富度和多度以中海拔的山地雨林最高, 分别为28 ± 5种和33 ± 6个, 而人工林最低, 分别为11 ± 1种和11 ± 2个。植被类型主要影响共生型大型真菌物种丰富度(P = 0.026)和子实体多度(P = 0.019)及Shannon-Wiener多样性(P = 0.028), 但对腐生型大型真菌的影响并不显著。多响应置换过程(multiple response permutation procedure, MRPP)检验结果表明, 不同植被类型对共生型与腐生型大型真菌群落物种组成均有显著影响(腐生型: P = 0.004, 共生型: P = 0.041)。冗余分析(redundancy analysis, RDA)的结果表明, 植被类型对腐生型和共生型真菌群落物种组成差异的解释度均较低(共生型: R² = 0.068, P = 0.004; 腐生型: R² = 0.067, P = 0.004)。海拔仅对腐生型真菌群落物种组成产生微弱影响(R² = 0.029, P = 0.001), 而对共生型真菌影响不显著(R² = 0.024, P = 0.072)。在不同保护地之间, 共生型(R² = 0.148, P = 0.001)与腐生型(R² = 0.123, P = 0.002)真菌物种组成均具显著差异; 基于样带‒真菌矩阵的网络图显示, 海南热带雨林国家公园内尖峰岭、霸王岭、五指山等国家级自然保护区的山地雨林是共生型大型真菌多样性较高区域, 应作为共生型真菌与宿主的优先保护区域。     

Meta-pathway degradation of phenolics by thermophilic Bacilli

Thermophilic bacteria capable of degrading phenol as the sole carbon source were isolated from sewage effluent. The isolates were aerobic, sporulating, motile rod-shaped bacteria characterized as Bacillus species with growth temperature optima of 50–60°C. The enzyme catalyzing the second step in the phenol degradation meta-cleavage pathway, catechol-2,3-dioxygenase, was detected in all isolates grown in the presence of phenol. One strain, designated Bacillus strain Cro3.2, was capable of degrading phenol, o-, m-, and p-cresol via the meta-pathway and tolerated phenol at concentrations up to 0.1% (w/v) without apparent inhibition of growth. Phenol degradation activities in strain Cro3.2 were induced 3–5 h after supplementation by phenol, orcinol, and the cresols but not by halo- or nitro-substituted phenols. Maximal rates of phenol degradation in stirred bioreactors (10 μmol/min⁻¹/g⁻¹ cells) were achieved at an O₂ delivery rate of 1.0 vvm and temperatures of 45–60°C; however, catechol-2,3-dioxygenase (but not 2-hydroxymuconic semialdehyde dehydrogenase) was rapidly inactivated at high oxygen concentrations. Whole cells of Bacillus strain Cro3.2 entrapped in calcium alginate, polyacrylamide, and agarose gels showed widely different rates of phenol degradation. In calcium alginate gels, rapid loss of phenol-degrading activity was attributed to calcium-induced inactivation of catechol-2,3-dioxygenase. No stabilization with respect to oxygen-induced inactivation was observed under any of the immobilization conditions. It is concluded that the counteractive effects of oxygen limitation at low dO₂ and inactivation of catechol-2,3-dioxygenase at high dO₂ levels pose a significant impediment to the use of resting thermophile cells in the treatment of phenolic waste streams.     

Efficient plant regeneration from seedling explants of two commercially important temperate eucalypt species–Eucalyptus nitens and E. globulus

A reliable and reproducible method for plant regeneration in vitro of two important temperate eucalypts, Eucalyptus nitens and E. globulus, has been developed which utilises seedling explants. Highly regenerative callus was obtained from individual cotyledon and hypocotyledon explants of both species following cultivation on Murashige and Skoog’s (MS) basal nutrient medium supplemented with 30 g l⁻¹ sucrose, 5–10% (v/v) coconut water, 0.8% agar, 1 mg l⁻¹ -naphthalene-acetic acid (NAA) and 0.5 mg l⁻¹ N⁶ benzylaminopurine (BAP). Shoot differentiation was observed 7–8 weeks after transfer of callus onto regeneration medium containing 0.5 mg l⁻¹ NAA and 1 mg l⁻¹ BAP. In a few instances, direct shoot regeneration occurred without an intervening callus phase in both species. The frequency of plant regeneration was higher for callus derived from hypocotyl segments (30–35%) compared to cotyledonary explants (20–25%) though the average number of shoots per cotyledonary explant was generally higher than for hypocotyl explants. Somatic embryos were observed occasionally in E. nitens, arising from the surface of organogenic callus. Organised structures closely resembling somatic embryos were also observed in E. globulus. Regenerated shoots (30–40%) of both species could be rooted in modified MS media containing indole-3-butyric acid (IBA) and plantlets were successfully transferred to soil.