甲醛对DNA损伤的彗星实验研究

甲醛是一种遗传毒性物质。国内外学者的大量研究证实,甲醛可以引起DNA-DNA、DNA-蛋白质分子交联,但对于甲醛是否能够引起DNA 分子的断裂,学界却存在分歧。本实验以颊黏膜细胞作为实验材料,通过彗星实验对甲醛的遗传毒性——尤其是DNA 分子断裂作用进行了系统的研究。结果显示甲醛在较低浓度(5μmol/L,7.5μmol/L,10μmol/L)时具有断裂作用,在较高浓度(15μmol/L,30μmol/L,50μmol/L)时则具有交联作用。根据本实验的结果,本文还首次论证了甲醛断裂作用的断裂峰值(7.5μmol/L)。     

用彗星实验技术分析MTX对小鼠细胞DNA的损伤作用

MTX是一种抗叶酸药物 ,作用于增殖细胞 ,为了解其作用机制和探测其遗传毒性靶器官 ,以小鼠为研究对象 ,用彗星实验技术检测了MTX腹腔注射染毒后对脾、骨髓、胸腺、和外周血淋巴细胞的DNA损伤作用及其与MTX剂量间的相关。 1.2 5～ 5mg/kgMTX可诱发小鼠体内 4种细胞的DNA单链断裂 ,核DNA损伤程度与用药剂量呈正相关。不同种类细胞对MTX的易感性不同 ,脾、骨髓、胸腺、外周血淋巴细胞可能是MTX的遗传毒性靶细胞。外周血淋巴细胞在SCGE分析中的拖尾现象可作为用药后组织器官对药物敏感性反映的生物标志     

彗星分析及其在DNA损伤研究中的应用

Ostling和 Johanson于 1 984年创立了一种检测单细胞 DNA链断裂的方法 ,他们将少量经过 γ射线辐照的细胞包埋在薄层琼脂糖中 ,裂解后加电场电泳 ,用亲合 DNA的荧光染料染色 ,在荧光显微镜下观看断裂的 DNA片段从大到小由细胞核向外扩散迁移 ,就象彗星一样 ,故称为彗星分析 (Comet Assay)。以后又有不少学者对这种方法进行了改善 ,但一直没有统一实验方案 ,因此很难进行比较 ,但总的来说 ,可以概括如下 :　　本文对彗星分析法中的关键步骤作简短讨论 ,然后谈谈它在 DNA损伤研究中的应用。1　制片一般用终浓度 0 .5 %～ 1 .0 %的低熔…     

铅、铬胁迫对大弹涂鱼血细胞遗传损伤的彗星实验检测

通过彗星实验研究重金属Pb、Cr对大弹涂鱼的外周血细胞的影响。用不同浓度的Pb、Cr对大弹涂鱼外周血细胞进行1 h的染毒后通过单细胞凝聚电泳检测DNA损伤情况。结果表明国标浓度的Pb（0.005 mg/L）、Cr（0.05 mg/L）对大弹涂鱼外周血细胞均无明显影响;而国标10倍、100倍和1000倍浓度的Pb或Cr胁迫均会造成血细胞DNA损伤,且离子浓度与血细胞DNA的损伤程度间均存在＂剂量-效应＂,即浓度越高,DNA损伤越严重。因此大弹涂鱼血细胞可作为评价重金属遗传损伤毒性效应的敏感性生物标志物。     

溴氰菊酯致大鼠DNA损伤及对肝功能的影响

目的：研究溴氰菊酯（DM）对大鼠外周血淋巴细胞DNA的损伤作用及对肝脏功能的影响。方法：32只雌性Wistar大鼠随机分成4组,染毒剂量分别为0,3．125,6．250,12．500mg／kg,连续灌胃染毒10天。DNA损伤采用单细胞凝胶电泳（彗星实验）进行评价,并测定丙氨酸氨基转移酶（ALT）以反映肝功能变化。结果：染毒组大鼠外周淋巴细胞的尾DNA％（Tail DNA％）、尾矩（Tail Moment）和Olive尾矩（Olive Tail Moment）均高于对照组（P〈0．05）,差别有统计学意义。各染毒组与对照组的肝功能差异均无统计学意义。结论：DM可导致外周血淋巴细胞DNA损伤。     

紫外辐射诱导烟草原生质体中DNA损伤的彗星电泳检测

以烟草原生质体为材料,采用彗星电泳检测用0.5W·m^-2紫外线以不同时间（0、5、10、30、60和120s）诱导的烟草原生质体中DNA的损伤。结果表明,在0～10s的时间内代表DNA损伤程度的尾矩、Olive尾矩等参数与紫外线照射时间具有良好的时间依赖关系。本文建立的烟草原生质体体系采用彗星电泳技术,可以快速而灵敏地检测紫外线对植物细胞的损伤程度。     

Hela细胞端粒DNA断裂损伤

Telomeres are the repetitive G-rich DNA sequences at the end of chromosomes and shorten at each round of cell division.Besides the incomplete DNA synthesis,single and double DNA strand breaks,if not repaired, also contribute to the telomere shortening.To assess the frequency of strand breaks in proliferating Hela cells,telomere fragments were released by alkaline denaturing and electrophoresis from cells embedded in agarose,blotted onto membrane,and detected by probe specific to telomere sequence.The quantity of telomere fragments released was estimated to be less than 0.4% of the total telomere content,which corresponded to less than one break per cell.Since the mean length of the terminal restriction fragments of the cells was about 7 kbp,the fragments detected would lead to less than 19 bp in mean telomere shortening [Acta Zoologica Sinica 49(6):873-877,2003].     

应用改良彗星试验检测杀虫剂对小鼠细胞DNA的损伤

目的：检测杀虫剂（杀灭菊酯乳油）是否对小鼠外周血淋巴细胞DNA有损伤。方法：应用改良彗星试验（单细胞凝胶电泳）分别检测三个剂量组和对照组小鼠外周血淋巴细胞。结果：剂量组的彗星出现率与阴性对照组存在显著差异（P＜0．05）,而与阳性对照组差异不显著（P＞0．05）。结论：该杀虫剂对小鼠外周血淋巴细胞DNA有一定程度的损伤。     

原位缺口移位技术检测药物对细胞DNA的断裂损伤

本文除简要地介绍了原位缺口移位技术的原理外,详细地描述了其操作程序,读者当可按此试用,得到应有的结果。本文也例举并讨论了该技术的应用,并指出这是当前分子细胞生物学方法的一项重要进展。     

The comet assay for DNA damage and repair

The comet assay (single-cell gel electrophoresis) is a simple method for measuring deoxyribonucleic acid (DNA) strand breaks in eukaryotic cells. Cells embedded in agarose on a microscope slide are lysed with detergent and high salt to form nucleoids containing supercoiled loops of DNA linked to the nuclear matrix. Electrophoresis at high pH results in structures resembling comets, observed by fluorescence microscopy; the intensity of the comet tail relative to the head reflects the number of DNA breaks. The likely basis for this is that loops containing a break lose their supercoiling and become free to extend toward the anode. The assay has applications in testing novel chemicals for genotoxicity, monitoring environmental contamination with genotoxins, human biomonitoring and molecular epidemiology, and fundamental research in DNA damage and repair. The sensitivity and specificity of the assay are greatly enhanced if the nucleoids are incubated with bacterial repair endonucleases that recognize specific kinds of damage in the DNA and convert lesions to DNA breaks, increasing the amount of DNA in the comet tail. DNA repair can be monitored by incubating cells after treatment with damaging agent and measuring the damage remaining at intervals. Alternatively, the repair activity in a cell extract can be measured by incubating it with nucleoids containing specific damage.     

Detection of alkylation damage in human lymphocyte DNA with the comet assay

The enzyme 3-methyladenine DNA glycosylase II (AlkA) is a bacterial repair enzyme that acts preferentially at 3-methyladenine residues in DNA, releasing the damaged base. The resulting baseless sugars are alkali-labile, and under the conditions of the alkaline comet assay (single cell gel electrophoresis) they appear as DNA strand breaks. AlkA is no t lesion-specific, but has a low activity even w ith undamagedbases. We have tested the enzyme at different concentrations to find conditions that maximise detection of alkylated bases with minimal attack on normal, undamaged DNA. AlkA detects damage in the DNA of cells treated with low concentrations of methyl methanesulphonate. We also find low background levels of alkylated bases in normal human lymphocytes.     

Measuring oxidative damage to DNA and its repair with the comet assay

Background

Single cell gel electrophoresis, or the comet assay, was devised as a sensitive method for detecting DNA strand breaks, at the level of individual cells. A simple modification, incorporating a digestion of DNA with a lesion-specific endonuclease, makes it possible to measure oxidised bases.

Scope of review

With the inclusion of formamidopyrimidine DNA glycosylase to recognise oxidised purines, or Nth (endonuclease III) to detect oxidised pyrimidines, the comet assay has been used extensively in human biomonitoring to monitor oxidative stress, usually in peripheral blood mononuclear cells.

Major conclusions

There is evidence to suggest that the enzymic approach is more accurate than chromatographic methods, when applied to low background levels of base oxidation. However, there are potential problems of over-estimation (because the enzymes are not completely specific) or under-estimation (failure to detect lesions that are close together). Attempts have been made to improve the inter-laboratory reproducibility of the comet assay.

General significance

In addition to measuring DNA damage, the assay can be used to monitor the cellular or in vitro repair of strand breaks or oxidised bases. It also has applications in assessing the antioxidant status of cells. In its various forms, the comet assay is now an invaluable tool in human biomonitoring and genotoxicity testing. This article is part of a Special Issue entitled Current methods to study reactive oxygen species - pros and cons and biophysics of membrane proteins. Guest Editor: Christine Winterbourn.     

Investigating oxidative DNA damage and its repair using the comet assay

The comet assay is not the only way to measure oxidative DNA damage, but it is one of the most sensitive and accurate, being relatively free of artefacts. It is a valuable tool in population monitoring, for example in assessing the role of oxidative stress in human disease, and in monitoring the effects of dietary antioxidants. A simple modification allows the measurement of DNA repair. In combination with the analysis of polymorphisms in relevant genes, the comet assay - especially when adapted for analysis of large numbers of samples - can provide important information on the interactions between genetic variation and environmental factors in maintaining genome stability.     

Singlet oxygen-mediated damage to cellular DNA determined by the comet assay associated with DNA repair enzymes

The damage profile produced by the reaction of singlet molecular oxygen with cellular DNA was determined using the comet assay associated with DNA repair enzymes. Singlet oxygen was produced intracellularly by thermal decomposition of a water-soluble endoperoxide of a naphthalene derivative which is able to penetrate through the membrane into mammalian cells. We found that the DNA modifications produced by singlet oxygen were almost exclusively oxidised purines recognised by the formamidopyrimidine DNA N-glycosylase. In contrast, significant amounts of direct strand breaks and alkali-labile sites or oxidised pyrimidines, detectable by the bacterial endonuclease III, were not produced.     

Measuring oxidative damage to DNA; HPLC and the comet assay compared

Depending on the analytical method employed estimates of background levels of base oxidation in human DNA vary over orders of magnitude. It is now realised that oxidation of guanine in vitro can result in serious overestimation of the nucleoside by HPLC (with electrochemical detection). We have modified procedures of isolation, hydrolysis and storage of DNA with the aim of eliminating this artefact. Vacuum- or freeze-drying, and dialysis, tend to encourage oxidation. We compare results obtained with HPLC and with the comet assay, which employs lesion-specific enzymes to introduce breaks in DNA at sites of oxidative damage. Although estimates of background levels of DNA oxidation using the comet assay are several-fold lower than the estimates by HPLC, both approaches have been used successfully to detect differences between human subjects or population groups that seem to relate to human disease and nutritional factors.     

Endurance exercise results in DNA damage as detected by the comet assay

To determine if 6 weeks of supplementation with antioxidants could alleviate exercise-induced DNA damage, we studied 21 runners during a 50 km ultramarathon. Subjects were randomly assigned to one of two groups: (1) placebos (PL) or (2) antioxidants (AO) (1000 mg vitamin C and 400 IU RRR-alpha-tocopheryl acetate). The comet assay was used to assess DNA damage in circulating leukocytes at selected time points: pre-, mid-, and 2 h postrace and daily for 6 days postrace. All subjects completed the race: run time 7.1 +/- 0.1 h, energy expenditure 5008 +/- 80 kcal for women (n = 10) and 6932 +/- 206 kcal for men (n = 11). Overall, the percentage DNA damage increased at midrace (p <.02), but returned to baseline by 2 h postrace, indicating that the exercise bout induced nonpersistent DNA damage. There was a gender x treatment x time interaction (p <.01). One day postrace, women taking AO had 62% less DNA damage than women taking PL (p <.0008). In contrast, there were no statistically significant differences between the two treatment groups of men at any time point. Thus, endurance exercise resulted in DNA damage as shown by the comet assay and AO seemed to enhance recovery in women but not in men.     

Measuring oxidative damage to DNA; HPLC and the comet assay compared

Depending on the analytical method employed estimates of background levels of base oxidation in human DNA vary over orders of magnitude. It is now realised that oxidation of guanine in vitro can result in serious overestimation of the nucleoside by HPLC (with electrochemical detection). We have modified procedures of isolation, hydrolysis and storage of DNA with the aim of eliminating this artefact. Vacuum- or freeze-drying, and dialysis, tend to encourage oxidation. We compare results obtained with HPLC and with the comet assay, which employs lesion-specific enzymes to introduce breaks in DNA at sites of oxidative damage. Although estimates of background levels of DNA oxidation using the comet assay are several-fold lower than the estimates by HPLC, both approaches have been used successfully to detect differences between human subjects or population groups that seem to relate to human disease and nutritional factors.     

The comet assay detects adaptation to MNU-induced DNA damage in barley

We have established the comet assay for detection of DNA damage in barley. Immediately after treatment with the monofunctional alkylating agent MNU, a dose-dependent increase of DNA damage (mainly DNA breaks) was detected by the alkaline denaturation/neutral gel electrophoresis (A/N) variant of the comet assay in nuclei isolated from root tip meristems and from young leaves. A reduction of damage was observed within meristematic nuclei but not in differentiated leaf nuclei 48h after treatment. Adaptive pretreatment with a nontoxic dose of cadmium chloride prior to challenge treatment with MNU reduced the frequency of chromatid type aberrations, micronuclei and aneuploid cells as well as the amount of DNA in comet tails of meristematic nuclei.