A new perspective on size hierarchies in nature: patterns, causes, and consequences

Many plant and animal aggregations have size hierarchies within which a variety of sizes of individuals, from large to small, can be found. Size hierarchies are thought to indicate the existence of competition amongst individuals within the aggregation, but determining their exact cause is difficult. The key to understanding size hierarchies lies in first quantifying the pattern of size and growth of individuals. We conducted a quantitative investigation of pattern in the size hierarchy of the clown anemonefish Amphiprion percula, in Madang Lagoon, Papua New Guinea. Here, groups of A. percula occupy sea anemones (Heteractis magnifica) that provide protection from predators. Within each anemone there is a single group composed of a breeding pair and zero to four non-breeders. Within each group there is a single size hierarchy; the female is largest (rank 1), the male is second largest (rank 2), and the non-breeders get progressively smaller (ranks 3–6). We demonstrate that individuals adjacent in rank are separated by body size ratios whose distribution is significantly different from the distribution expected under a null model—the growth of individuals is regulated such that each dominant ends up being about 1.26 times the size of its immediate subordinate. We show that it is decisions about growth at the individual level that generate the size hierarchy at the group level, and thereby determine maximum group size and population size. This study provides a new perspective on the pattern, causes and consequences of size hierarchies.     

Spatial subdivision among assemblages of Spanish mackerel, Scomberomorus commerson (Pisces: Scombridae) across northern Australia: implications for fisheries management

Aim This study investigated the use of stable δ¹³C and δ¹⁸O isotopes in the sagittal otolith carbonate of narrow‐barred Spanish mackerel, Scomberomorus commerson, as indicators of population structure across Australia. Location Samples were collected from 25 locations extending from the lower west coast of Western Australia (30°), across northern Australian waters, and to the east coast of Australia (18°) covering a coastline length of approximately 9500 km, including samples from Indonesia. Methods The stable δ¹³C and δ¹⁸O isotopes in the sagittal otolith carbonate of S. commerson were analysed using standard mass spectrometric techniques. The isotope ratios across northern Australian subregions were subjected to an agglomerative hierarchical cluster analysis to define subregions. Isotope ratios within each of the subregions were compared to assess population structure across Australia. Results Cluster analysis separated samples into four subregions: central Western Australia, north Western Australia, northern Australia and the Gulf of Carpentaria and eastern Australia. Isotope signatures for fish from a number of sampling sites from across Australia and Indonesia were significantly different, indicating population separation. No significant differences were found in otolith isotope ratios between sampling times (no temporal variation). Main conclusions Significant differences in the isotopic signatures of S. commerson demonstrate that there is unlikely to be any substantial movement of fish among these spatially discrete adult assemblages. The lack of temporal variation among otolith isotope ratios indicates that S. commerson populations do not undergo longshore spatial shifts in distribution during their life history. The temporal persistence of spatially explicit stable isotopic signatures indicates that, at these spatial scales, the population units sampled comprise functionally distinct management units or separate ‘stocks’ for many of the purposes of fisheries management. The spatial subdivision evident among populations of S. commerson across northern and western Australia indicates that it may be advantageous to consider S. commerson population dynamics and fisheries management from a metapopulation perspective (at least at the regional level).     

Socio-spatial levels in linearity analysis of dominance hierarchies: a case study on elephant seals

The analysis of linearity is a key aspect of the study of dominance hierarchies. To study the effect of the choice of socio-spatial level of analysis, we calculated linearity in a large set of southern elephant seal (Mirounga leonina) hierarchies from two populations (Valdés Peninsula and Falkland Islands). The socio-spatial level of analysis affects the observational effort, the completeness of matrices, and the frequency of unknown relationships. These factors, in turn, have a notable effect on linearity. We conclude that dominance should be studied at the local level, where the absence of structural zeros and the low incidence of observational zeros produce complete matrices, well rooted in the true spatial and social structure of the population. Depending on the specific social system, the extrapolation of dominance from the local level to higher levels may result in sparse matrices, and in biased estimates of linearity. The variation of the socio-spatial level of analysis may in part explain the contrasting results obtained in different studies of linearity of dominance hierarchies. Electronic Publication     

The Maintenance of Stable Dominance Hierarchies and the Pattern of Aggression: Support for the Suppression Hypothesis

Three hypotheses have been proposed to explain the development and maintenance of dominance hierarchies. According to the first hypothesis the dominance hierarchy is a result of the animals fighting once at their first encounter and then using the outcome of that fight to determine the rank order. The second hypothesis proposes that a dominance hierarchy reflects the fighting ability of the individuals in the group at each moment and is therefore relatively fluid with individuals continuously fighting for position. A third hypothesis, the suppression hypothesis, states that the dominance hierarchy is based to a large extent on the outcome of the first fight between the individuals but the dominant animal in each pair continuously attacks the subdominant individuals to condition them to lose in future encounters. We studied six well‐established flocks containing six adult hens each (Gallus gallus domesticus). Five of the flocks had linear hierarchies. The aggression was significantly more often directed towards the next low‐ranking individual. There was a good correlation between rank and comb size (height × width), but no significant correlation between rank and weight, or rank and level of fluctuating asymmetry. There was no significant correlation between levels of aggression and similarity of comb size for individuals of neighboring ranks. Our results tentatively support the suppression hypothesis for the maintenance of dominance hierarchies in the domestic hen.     

Temporal Variability of the Bioaerosol Background at a Subway Station: Concentration Level,Size Distribution,and Diversity of Airborne Bacteria

Naturally occurring bioaerosol environments may present a challenge to biological detection-identification-monitoring (BIODIM) systems aiming at rapid and reliable warning of bioterrorism incidents. One way to improve the operational performance of BIODIM systems is to increase our understanding of relevant bioaerosol backgrounds. Subway stations are enclosed public environments which may be regarded as potential bioterrorism targets. This study provides novel information concerning the temporal variability of the concentration level, size distribution, and diversity of airborne bacteria in a Norwegian subway station. Three different air samplers were used during a 72-h sampling campaign in February 2011. The results suggested that the airborne bacterial environment was stable between days and seasons, while the intraday variability was found to be substantial, although often following a consistent diurnal pattern. The bacterial levels ranged from not detected to 10³ CFU m⁻³ and generally showed increased levels during the daytime compared to the nighttime levels, as well as during rush hours compared to non-rush hours. The airborne bacterial levels showed rapid temporal variation (up to 270-fold) on some occasions, both consistent and inconsistent with the diurnal profile. Airborne bacterium-containing particles were distributed between different sizes for particles of >1.1 μm, although ∼50% were between 1.1 and 3.3 μm. Anthropogenic activities (mainly passengers) were demonstrated as major sources of airborne bacteria and predominantly contributed 1.1- to 3.3-μm bacterium-containing particles. Our findings contribute to the development of realistic testing and evaluation schemes for BIODIM equipment by providing information that may be used to simulate operational bioaerosol backgrounds during controlled aerosol chamber-based challenge tests with biological threat agents.     

Temporal sampling,resetting, and adaptation orchestrate gradient sensing in sperm

Sperm, navigating in a chemical gradient, are exposed to a periodic stream of chemoattractant molecules. The periodic stimulation entrains Ca²⁺ oscillations that control looping steering responses. It is not known how sperm sample chemoattractant molecules during periodic stimulation and adjust their sensitivity. We report that sea urchin sperm sampled molecules for 0.2–0.6 s before a Ca²⁺ response was produced. Additional molecules delivered during a Ca²⁺ response reset the cell by causing a pronounced Ca²⁺ drop that terminated the response; this reset was followed by a new Ca²⁺ rise. After stimulation, sperm adapted their sensitivity following the Weber–Fechner law. Taking into account the single-molecule sensitivity, we estimate that sperm can register a minimal gradient of 0.8 fM/µm and be attracted from as far away as 4.7 mm. Many microorganisms sense stimulus gradients along periodic paths to translate a spatial distribution of the stimulus into a temporal pattern of the cell response. Orchestration of temporal sampling, resetting, and adaptation might control gradient sensing in such organisms as well.     

Periodicity and chaos in the response of Halobacterium to temporal light gradients

Halobacteria spontaneously reverse their swimming direction about every 10 s. This periodicity can be altered by light stimuli. We found that temporal exponential changes in light intensity, depending on wavelength and sign, lengthened or shortened the intervals between reversals. Within a limited range of steepness, light gradients enforced a new stable periodicity upon the system. Outside this range, they caused period doubling or induced a sequence of reversal events without any obvious regularity. An analysis of a functional relationship between apparently irregular periods by plotting each period as a function on the preceding one yielded a clearly discernible non-random structure, which shows some similarities to the one obtained by a model calculation for a periodically perturbed limit cycle oscillator. These results indicate that external forcing of the system may generate chaos. When the decay of intracellular sensory signals is delayed by inhibition of protein methylation the transition from periodic to aperiodic behavior occurs at a lower steepness of the gradient. We therefore assume that the generation of either periodic or deterministic chaotic behavior is determined by the relation between the signal lifetime and the frequency of stimulus inputs. The strong indications for transitions from periodic to chaotic behavior can be regarded as a further support of our hypothesis that the behavioral pattern of Halobacterium is controlled by an endogeneous oscillator.     

Effects of organic enrichment on meiofaunal abundance and community structure in sublittoral soft sediments

In experimental mesocosms established at Solbergstrand, Oslofjord, Norway, organic enrichment was effected by the addition of powdered Ascophyllum nodosum (L.) Le Jol., in quantities equivalent to 50gC·m^?2 and 200gC·m^?2, to boxes of sublittoral soft sediment. After 56 days, the structure of the meiofaunal communities in these treatments was compared with that of the control boxes. At this time the meiofaunal communites at each level of organic enrichment were markedly different from each other and from that in the control sediment. The responses of the two major components of the meiofauna, however, were different. Although the abundance of nematodes was slightly reduced in the high dose treatment this was not accompanied by detectable changes in community structure. Harpacticoid copepods, on the other hand, increased significantly in abundance in the treatment boxes and showed a general trend towards increased dominance and decreased diversity with increasing levels of organic enrichment, although in the low dose treatment there was also an increase in the number of species present. It is also shown that the nematode/copepod ratio is unreliable as a biomonitoring tool and it is suggested that the differential responses in community structure between the nematode and copepod components of the meiofauna might be a better indication of stress at the community level.     

Response of Bacterioplankton Communities to Cadmium Exposure in Coastal Water Microcosms with High Temporal Variability

Multiple anthropogenic disturbances to bacterial diversity have been investigated in coastal ecosystems, in which temporal variability in the bacterioplankton community has been considered a ubiquitous process. However, far less is known about the temporal dynamics of a bacterioplankton community responding to pollution disturbances such as toxic metals. We used coastal water microcosms perturbed with 0, 10, 100, and 1,000 μg liter⁻¹ of cadmium (Cd) for 2 weeks to investigate temporal variability, Cd-induced patterns, and their interaction in the coastal bacterioplankton community and to reveal whether the bacterial community structure would reflect the Cd gradient in a temporally varying system. Our results showed that the bacterioplankton community structure shifted along the Cd gradient consistently after a 4-day incubation, although it exhibited some resistance to Cd at low concentration (10 μg liter⁻¹). A process akin to an arms race between temporal variability and Cd exposure was observed, and the temporal variability overwhelmed Cd-induced patterns in the bacterial community. The temporal succession of the bacterial community was correlated with pH, dissolved oxygen, NO₃⁻-N, NO₂⁻-N, PO₄³⁻-P, dissolved organic carbon, and chlorophyll a, and each of these parameters contributed more to community variance than Cd did. However, elevated Cd levels did decrease the temporal turnover rate of community. Furthermore, key taxa, affiliated to the families Flavobacteriaceae, Rhodobacteraceae, Erythrobacteraceae, Piscirickettsiaceae, and Alteromonadaceae, showed a high frequency of being associated with Cd levels during 2 weeks. This study provides direct evidence that specific Cd-induced patterns in bacterioplankton communities exist in highly varying manipulated coastal systems. Future investigations on an ecosystem scale across longer temporal scales are needed to validate the observed pattern.     

Interaction of ion tracks in spatial and temporal proximity

In the present work, a systematic analysis of the impact of spatial and temporal proximity of ion tracks on the yield of higher-order radiolytic species as well as of DNA damage patterns is presented. This potential impact may be of concern when laser-driven particle accelerators are used for ion radiation therapy. The biophysical Monte Carlo track structure code PARTRAC was used and, to this end, extended in two aspects: first, the temporal information about track evolution has been included in the track structure module and, second, the simulation code has been modified to enable parallel multiple track processing during simulation of subsequent modelling stages. Depending on the spatial and temporal separation between ion-track pairs, the yield of chemical species has been calculated for incident protons with start energies of 20 MeV, for He²⁺ ions with start energies of 1 and 20 MeV, and for 60 MeV C⁶⁺ ions. Provided the overlap of the considered ion tracks is sufficient in all four dimensions (space and time), the yield of hydroxyl radicals was found to be reduced compared to that of single tracks, for all considered ion types. The biological endpoints investigated were base damages, single-strand breaks, double-strand breaks, and clustered lesions for incident pairs of protons and He²⁺ ions, each with start energies of 20 MeV. The yield of clustered lesions produced by 20 MeV protons turned out to be influenced by the spatial separation of the proton pair; in contrast, no influence was found for different start times of the protons. The yield of single-strand breaks and base hits was found neither to depend on the spatial separation nor on the temporal separation between the incident protons. For incident 20 MeV He²⁺ ions, however, a dependence on the spatial and temporal separation of the ion pair was found for all considered biological endpoints. Nevertheless, spatial proximity conditions where such intertrack effects were obtained are not met in the case of tumour radiation therapy; thus, no impact on radiation effects due to short pulse duration of laser-driven accelerators can be expected from alterations during the chemical stage.     

Interspecific aggression in hermatypic corals from Bermuda

Interspecific aggression between hermatypic corals on Bermudian reefs has been investigated by aquarium and field studies, the latter involving induced interactions, observations from 30 m^-2 transects and random SCUBA traverses. Resultant hierarchies, constructed by ranking the abilities of species to damage competitors, show close similarities with each other and with the Jamaican hierarchy at the family level, notwithstanding some differences in the ranking of some species. Only 11% of natural-occurring interactions depart from the aquarium-derived results; in terms of species-pair combinations, 30% show partial or complete inversions from aquarium to field, with most changes involving species close together in the field hierarchy. Circular (intransitive) interactions occur mostly within a network of weakly-aggressive species in both aquarium- and fieldderived hierarchies. While number of potential interactions m^-2 varies directly with density, frequency of aggression is positively correlated with coral diversity (species richness), while frequency of no reactions and conspecific fusion (combined) shows a correspondingly negative correlation with diversity. Frequency of aggression does not appear to be depth related. Comparison of aquarium and field hierarchies suggest that digestion by mesenterial filaments is the most important mechanism of aggression under natural conditions. Sweeper tentacle activity is the most likely cause of field reversals involving Madracis mirabilis and Montastrea cavernosa. Other factors, such as stress caused by seasonal environmental extremes, may be responsible for reversals or inconsistent behaviour in other species.     

干旱区绿洲城镇景观生态风险时空变化分析——以张掖绿洲乡镇为例

科学评估与分析干旱区绿洲乡镇景观生态风险,对优化绿洲土地资源管控和维护干旱区绿洲生态系统稳定性具有重要现实意义。以张掖市绿洲乡镇为对象,基于土地利用数据和景观格局指数,结合ArcGIS空间分析功能,研究其景观生态风险时空特征及影响因素。结果表明：1987—2018年,耕地和建设用地变化明显,分别增加429.03 km~2和236.26 km~2;整体景观生态风险呈下降趋势,并呈“南北高、中间低”格局特征;各乡镇风险水平在空间上正向聚集,位于绿洲边缘地区的乡镇风险变化明显;人为活动干扰是近年风险水平变化的主要因素。研究成果可为西北干旱区绿洲生态保护与治理提供决策参考。     

The effects of water-level fluctuations on weekly tree growth in a southeastern usa swamp

Annual growth of wetland trees has been shown to be related to variations in hydrologic regimes, however the relationship between water level fluctuations and tree growth throughout the growing season has not been documented. In a study of weekly growth patterns of three wetland tree species in a southeastern forested wetland, transfer function modeling was used to examine relationships between tree growth and the weekly changes in water levels and weekly changes in the atmospheric water balance (precipitation minus potential evapotranspiration). An autoregressive-moving average model was fit to each time series of water-level changes (input series), and the selected model was then used to filter the tree-growth (output) time series. Cross-correlations between each input and output time series were examined and significant relationships between weekly changes in water levels and tree diameter were found for Nyssa sylvatica and Taxodium distichum trees growing at sites with periodic shallow flooding. There were no significant relationships between changing water levels and tree growth in areas with permanent flooding or soil saturation. Further, changes in growth of N. sylvatica, N. aquatica, and T. distichum were significantly cross-correlated with weekly changes in the atmospheric water balance at sites with either periodic or permanent flooding.     

Involvement of periodic deacylation-acylation cycles of mitochondrial phospholipids during Sr2+-induced oscillatory ion transport in rat liver mitochondria

Lysophosphatidylcholine and lysophosphatidylethanolamine levels were determined during Sr²⁺-induced oscillating ion fluxes in mitochondria prelabelled in vivo with ³²P_i. Periodic fluctuations of both lyso compounds were established with an increase at the stage of simultaneously monitored K⁺ influx and a decrease at K⁺ efflux. The periodic activations and inactivations of phospholipase were found to be associated with periodic changes in the incorporation rates of labelled polyunsaturated fatty acids with an apparent phase difference of 180°. Periodic deacylation-acylation cycles of phospholipids accompanying the periodic cycles of reversible ion accumulation and release are suggested to be involved in the trigger mechanism generating the permeability changes during oscillatory ion transport.     

A stochastic population approach to the problem of stable recruitment hierarchies in spiking neural networks

Synchrony-driven recruitment learning addresses the question of how arbitrary concepts, represented by synchronously active ensembles, may be acquired within a randomly connected static graph of neuron-like elements. Recruitment learning in hierarchies is an inherently unstable process. This paper presents conditions on parameters for a feedforward network to ensure stable recruitment hierarchies. The parameter analysis is conducted by using a stochastic population approach to model a spiking neural network. The resulting network converges to activate a desired number of units at each stage of the hierarchy. The original recruitment method is modified first by increasing feedforward connection density for ensuring sufficient activation, then by incorporating temporally distributed feedforward delays for separating inputs temporally, and finally by limiting excess activation via lateral inhibition. The task of activating a desired number of units from a population is performed similarly to a temporal k-winners-take-all network.     

The role of individual differences and patterns of resolution in the formation of dominance orders in domestic hen triads

This research compares the role of initial individual characteristics to that of patterns of resolution in which successive dominance relationships are established during the formation of triads in the domestic hen. Combining weight and comb size with prior victory or defeat in the site of encounter, we created three levels of asymmetries of characteristics for triads of hens. The effects of these asymmetries were then examined on the resultant hierarchies and on the order of conflict resolution within triads under two different conditions of assembly. In one condition (simultaneous triad), the three hens were simultaneously introduced to each other and could thus freely choose their opponent. In the other condition (step-assembled triad), the hen predicted to occupy the highest rank was left on standby and introduced once the other two hens had settled dominance. This condition disrupts the normal process of hierarchy formation by imposing the first sequence of dominance settlement. We found that the structure of triadic hierarchies can be predicted from individual characteristics existing prior to hierarchy formation. No difference in the resultant structures were found between conditions of introduction, though different paths of conflict resolution were followed indicating that individual differences had a more determining role on the resultant hierarchies than patterns of resolution. In addition to demonstrating that individual differences determine resultant triadic structures, the present results also show that the same end structures can be reached by following resolution paths that are not necessarily of the Double Dominance and Double Subordinance types as prescribed by Chase's model. It is also found that in the simultaneous condition hens select each other to form pairs. Therefore, individuals do not meet at random but choose each other as opponents. The two hens predicted from individual differences to occupy the highest ranks first settle dominance, followed by settlement between the winner of the previous encounter and the bystander.     

Temporal trends in genetic data and effective population size support efficacy of management practices in critically endangered dusky gopher frogs (Lithobates sevosus)

Monitoring temporal changes in population genetic diversity and effective population size can provide vital information on future viability. The dusky gopher frog, Lithobates sevosus, is a critically endangered species found only in coastal Mississippi, with low genetic variability as a consequence of isolation and population size reduction. Conservation management practices have been implemented, but their efficacy has not been addressed. We genotyped individuals collected 1997–2014 to determine temporal trends in population genetic variation, structure, and effective size. Observed and expected heterozygosity and allelic richness revealed temporally stable, but low, levels of genetic variation. Positive levels of inbreeding were found in each year. There was weak genetic structure among years, which can be attributed to increased effects of genetic drift and inbreeding in small populations. L. sevosus exhibited an increase in effective population size, and currently has an estimated effective size of 33.0–58.6 individuals, which is approximately half the census size. This large ratio could possibly be explained by genetic compensation. We found that management practices have been effective at maintaining and improving effective size and genetic diversity, but that additional strategies need to be implemented to enhance viability of the species.     

Role of body size and temporal hydrology in the dietary shifts of shortjaw tapertail anchovy Coilia brachygnathus (Actinopterygii, Engraulidae) in a large floodplain lake

Seasonal water-level changes in floodplain lakes can induce variations in primary and secondary production, thus affecting trophic interactions. In this study, we tested the latter by studying size- and temporal hydrology-related shifts in the diet of shortjaw tapertail anchovy Coilia brachygnathus (Actinopterygii, Engraulidae) from Lake Poyang. During the wet season, δ¹³C values ranged from ?28.2‰ for small anchovies to ?24.6‰ for larger individuals, but δ¹⁵N ranged from 18.9‰ for smaller fish to 12.4‰ for larger fish. Significant ¹³C-enrichment and ¹⁵N-depletion occurred with increasing size, revealing that different carbon sources were used as the fish grew. Given the high hydrologic fluctuation levels, significant differences in δ¹³C values were observed among larger anchovies between seasons, indicating a temporal dietary shift. Anchovies fed primarily on shrimp and fish during the low-water season despite the predominance of zooplankton during the two seasons studied, which indicated increased piscivorous reliance. C. brachygnathus exhibited higher δ¹⁵N values during the wet season because the food items were ¹⁵N-enriched. Human waste brought by floods could be another possible interpretation. Considering C. brachygnathus is an important link between plankton production and higher piscivorous trophic levels, changes in the species are expected to affect the functioning of lake food webs along the trophic pathway.