A simple plant regeneration-ability assay in a range of Lycopersicon species

Plant growth regulator-dependent (PGR-dependent) in vitro shoot organogenesis has been extensively studied in tomato (Lycopersicon esculentum), whereas PGR-independent adventitious shoot organogenesis received marginal attention in L. esculentum and no consideration at all in other Lycopersicon species. In the present study, induction of PGR-independent adventitious shoots was by decapitation of the apex and removal of preexisting shoot meristems of the seedling, and seedling culture on a medium with no PGR supplements. The existence of PGR-independent regeneration-ability was verified in L. esculentum genotypes (high pigment photomorphogenic mutants and wild-type counterparts) and was uncover amongst L. cheesmanii, L. chilense, L. chmielewskii, L. hirsutum, L. parviflorum, L.␣peruvianum and L. pimpinellifolium. Compared to species other than L. esculentum, high pigment photomorphogenic mutants displayed the weakest PGR-independent regeneration-ability. Our results imply that decapitated seedlings cultured on a medium without PGRs can serve as a convenient assay system for genotypic variation in self-controlled, PGR-independent, shoot regeneration-ability in a wide range of Lycopersicon species. Using transverse thin slices of the hypocotyl placed onto a medium supplemented with 0.2 μM zeatin reboside and 0.04 μM IAA, we assessed PGR-mediated shoot regeneration in L. esculentum genotypes. In a given genotype, more plants per seedling were established by PGR-mediated than by PGR-independent regeneration. However, with both modes of organogenesis, only a fraction of shoot buds eventually grew into normal plants, while others developed into abnormal regenerants having no stem. Percentage of stem-deficiency, in a given genotype, was higher in PGR-treated cultures, which indicates that PGRs amplify the formation frequency of imperfect adventitious apical shoot meristems. Unlike L. esculentum, adventitious shoot buds of other Lycopersicon species, induced by wounding seedlings that were not treated with PGRs, rarely formed regenerants lacking a stem.     

Fluctuating asymmetry in leaves and flowers of sympatric species in a tropical montane environment

Fluctuating asymmetry (FA) represents small, random variations in traits, presumably with bilateral symmetry, and is widely used as a tool to measure developmental instability in plants and animals. Because FA is a quick, simple and reliable measure, it has been frequently used for monitoring levels of environmental stress. This study investigated whether FA can be used as a predictor of individual developmental instability for four sympatric Melastomataceae species. To achieve that aim, 20 individuals of Trembleya laniflora, T. parviflora, Lavoisiera campos‐portoana and Tibouchina heteromalla were marked in southeastern Brazil and monitored before and during the flowering season. The FA index was calculated as the mean of the difference in the width or length between the left and right sides measured for each leaf or flower. All studied species exhibited asymmetry in the leaves and flowers, but the leaves of L. campos‐portoana and the petal width of T. heteromalla exhibited directional asymmetry, also an indicator of developmental instability. The highest level of leaf asymmetry was found in T. heteromalla and on flowers of L. campos‐portoana. None of the studied species exhibited a significant relationship between the FA level of the leaves and flowers on an individual basis, indicating that environmental and/or genetic sources of stress might act differently on different plant traits. For the studied species, measurements of FA can be suggested as useful tools to biomonitor levels of stress experienced by both leaves and flowers within the Melastomataceae family.     

Heterogeneity in multiple transmission pathways: modelling the spread of cholera and other waterborne disease in networks with a common water source

Many factors influencing disease transmission vary throughout and across populations. For diseases spread through multiple transmission pathways, sources of variation may affect each transmission pathway differently. In this paper we consider a disease that can be spread via direct and indirect transmission, such as the waterborne disease cholera. Specifically, we consider a system of multiple patches with direct transmission occurring entirely within patch and indirect transmission via a single shared water source. We investigate the effect of heterogeneity in dual transmission pathways on the spread of the disease. We first present a 2-patch model for which we examine the effect of variation in each pathway separately and propose a measure of heterogeneity that incorporates both transmission mechanisms and is predictive of R₀. We also explore how heterogeneity affects the final outbreak size and the efficacy of intervention measures. We conclude by extending several results to a more general n-patch setting.     

Genetic Allee effects on performance, plasticity and developmental stability in a clonal plant

Negative effects of small population size on fitness, so-called Allee effects, may threaten population persistence even in intact habitat remnants. We studied genotypes of 14 isolated populations of the clonal plant Ranunculus reptans, for which molecular genetic (RAPD-) variability is higher for large than for small populations. In a competition-free greenhouse environment vegetative offspring of genotypes from large populations produced more rosettes and flowers, indicating higher fitness. Within-genotype coefficients of variation in performance traits, indicating developmental instability, were lower for genotypes from populations with higher RAPD-variability. In competition with a taller grass, we found relative reduction in leaf length less pronounced for plants from large populations, suggesting higher adaptive plasticity. Our experimental study of a plant with predominantly vegetative reproduction suggests, that negative genetic effects of recent habitat fragmentation, which so far rather were expected in plants with frequent sexual reproduction, are more severe and more common than previously acknowledged.     

Multiple pathways in diaspore dispersal, exemplified by studies of Noogoora Burr (Xanthium occidentale Bertol., Compositae)

LIDDLE, M. J. & ELGAR, M. A., 1984. Multiple pathways in diaspore dispersal, exemplified by studies of Noogoora Burr ( Xanthium occidmtale Bertol., Compositae). Some of the ways in which the burrs are dispersed and some of the factors that may cause changes between the different dispersal pathways were examined. Populations of burrs were marked on the plants in an ungrazed paddock, a paddock grazed by horses, and a paddock grazed by sheep. Eleven percent of the marked populations were recovered from the hair of horses and 26% from the sheeps' wool. A single flood removed 80% of one population. Burrs moved a mean distance of 30 cm on paths used by horses and 18% were buried in the path soil. Burrs were placed in animals' hair by hand. After 16 days, sheep retained 76% of the burrs in their wool, while only 2% remained in the hair of horses and cattle. An experiment showed that burrs may be catapulted up to a distance of 3.3 m from the plants.
A model is presented which outlines the alternative or sequential pathways that may be followed by the burrs. Occasional events, such as flooding and presence or absence of stock, were the main causes of changes between pathways. In the model, these dispersal mechanisms are considered as release-phase and substrate-phase processes. Each process derives its energy from different sources and may be modified by inputs of energy from other sources.     

Genomic heterogeneity within conservedmetabolic pathways of Arthrobacter species - a bioinformatic approach

A comparative genomic analysis of three species of the soil bacterium Arthrobacter was undertaken with specific emphasis on genes involved in important and core energy metabolism pathways like glycolysis and amino acid metabolism. During the course of this study, it was revealed that codon bias of a particular species, namely Arthrobacter aurescens TC1, is significantly lower than that of the other two species A. chlorophenolicus A6 and Arthrobacter sp. FB24. The codon bias was also found to be negatively correlated with gene expression level which is determined by computing codon adaptation index of the genes. Uniformity in codon usage pattern among three species is evident in terms of genes which has high codon bias and multifunctional nature. Further, it was observed that this trend is present amongst the genes of important metabolic pathways, such as glycolysis and amino acid metabolism. The evolutionary divergence of the pathway gene sequences was calculated and was found to be equivalent in nature in the case of Arthrobacter sp. FB24 and Arthrobacter chlorophenolicus A6, but turned out to be dissimilar in the case of Arthrobacter aurescens TC1. A strong correlation between synonymous substitution rate and effective codon number or Nc was also observed. These observations clearly point out that the genes having low bias, in Arthrobacter aurescens TC1, and even of those that are part of highly conserved metabolic pathways like glycolysis and amino acid ensemble pathways have undergone a different type of evolution and might be subjected to positive selection pressure in comparison with Arthrobacter sp. FB24 and Arthrobacter chlorophenolicus A6.     

Using clonal replicates to explore genetic variation in a perennial plant species

Summary An experimental design is presented for estimating genetic parameters using a family structure with clonally replicated individuals. This experimental design provides a technique to quantify genetic variation in a population, with partial separation of additive, dominance and epistatic gene action. Our method is offered as an alternative to techniques for estimating epistatic gene action that require several generations and/or inbreeding. Such methods are not particularly useful for long-lived perennials with long generation cycles. An example of the analysis is given with a forest tree species, Populus deltoides Bartr., and parameter estimates are presented for traits measured over 8 years.     

Non-woody life-form contribution to vascular plant species richness in a tropical American forest

We provide total vascular plant species counts for three 1-ha plots in deciduous, semi-deciduous and evergreen forests in central Bolivia. Species richness ranged from 297 species and 22,360 individuals/ha in the dry deciduous forest to 382 species and 31,670 individuals/ha in the evergreen forest. Orchidaceae, Pteridophyta and Leguminosae were among the most species-rich major plant groups in each plot, and Peperomia (Piperaceae), Pleurothallis (Orchidaceae) and Tillandsia (Bromeliaceae), all epiphytes, were the most species-rich genera. This dominance of a few but very diverse and/or widespread taxa contrasted with the low compositional similarity between plots. In a neotropical context, these Central Bolivian forest plots are similar in total species richness to other dry deciduous and humid montane forests, but less rich than most Amazonian forests. Nevertheless, lianas, terrestrial herbs and especially epiphytes proved to be of equal or higher species richness than most other neotropical forest inventories from which data are available. We therefore highlight the importance of non-woody life-forms (especially epiphytes and terrestrial herbs) in Andean foothill forest ecosystems in terms of species richness and numbers of individuals, representing in some cases nearly 50% of the species and more than 75% of the individuals. These figures stress the need for an increased inventory effort on non-woody plant groups in order to accurately direct conservation actions. Electronic supplementary material  The online version of this article (doi:) contains supplementary material, which is available to authorized users.     

From introduction to equilibrium: reconstructing the invasive pathways of the Argentine ant in a Mediterranean region

Determining the geographical range of invasive species is an important component of formulating effective management strategies. In the absence of detailed distributional data, species distribution models can provide estimates of an invasion range and increase our understanding of the ecological processes acting at various spatial scales. We used two complementary approaches to evaluate the influence of historical and environmental factors in shaping the distribution of the Argentine ant ( Linepithema humile ), a widespread, highly invasive species native to South America. Occurrence data were combined with environmental data at incremental spatial scales (extent and resolution) to predict the suitable range of the ant invasion using ecological niche models. In addition, we also used a spread model that simulated the jump dispersal of the species to identify the most plausible scenarios of arrival of L. humile in the NE Iberian Peninsula at local scales. Based on the results of both modelling practices, we suggest that L. humile might have reached its maximum geographic range at regional scales in the NE Iberian Peninsula. However, the species does not appear in equilibrium with the environment at small spatial scales, and further expansions are expected along coastal and inland localities of the Costa Brava. Long-distance jumps are ultimately responsible for the spread of the Argentine ant in the area. Overall, our study shows the utility of combining niche based models with spread models to understand the dynamics of species' invasions.     

Existence of homologous sequences corresponding to cDNA of the ver gene in diverse higher plant species

INTRODUCT1ONIn the vast majority of higher plalls, a transitionfrom vegetative growth to reproductive developmentis strongly influenced by a set of environmental fac-tors, such as photoperiod, temperatu-re etc. Bothwinter trait and biennia1 plants require a period of1ow temperature fOr switching from vegetative to re-productive growth, and this process is known as ver-na1ization. Several physiological and genetic inves-tigations showed that the vrngenes control the ver-nalization traits of…     

Factors affecting the activity of two species of eel (Anguilla spp.) in a small New Zealand lake

Fyke net captures of both the shortfinned eel, Anguilla ausrralis Richardson, and the longfinned eel. A. dieffenbachü Gray, were recorded over a 4-year period in Lake Pounui. New Zealand. Eel activity measured as catch per unit effort (CPUE) was correlated to 36 indices of water temperature water level, barometric pressure, amount of light at night and lunar period using multiple regression analysis. For longfinned eels, water temperature was the only individual parameter significantly related (P<0.001) to CPUE. The multiple regression model was improved (R²= 0.29. P <0.01) by the addition of lunar phase and change in barometric pressure. Water level was the most important parameter in the model for shortfinned eels, although water temperature and change in barometric pressure were significant influences in the predictability of the model (R²= 0.51. P<0.001.     

Unusually high losses to nest collapse in Black-headed Buntings Emberiza melanocephala nesting on a preferred plant species

Capsule Birds select Cotton Thistles as a nesting substrate but these plants provide an unstable support.     

Functional acclimation to solar UV-B radiation in Gunnera magellanica, a native plant species of southernmost Patagonia

The ecosystems of Tierra del Fuego (in southern Patagonia, Argentina) are seasonally exposed to elevated levels of ultraviolet‐B radiation (UV‐B: 280–315 nm), due to the passage of the ‘ozone hole’ over this region. In the experiments reported in this article the effects of solar UV‐B and UV‐A (315–400 nm) on two UV‐B defence‐related processes: the accumulation of protective UV‐absorbing compounds and DNA repair, were tested. It was found that the accumulation of UV‐absorbing sunscreens in Gunnera magellanica leaves was not affected by plant exposure to ambient UV radiation. Photorepair was the predominant mechanism of cyclobutane‐pyrimidine dimer (CPD) removal in G. magellanica. Plants exposed to solar UV had higher CPD repair capacity under optimal conditions of temperature (25 °C) than plants grown under attenuated UV. There was no measurable repair at 8 °C. The rates of CPD repair in G. magellanica plants were modest in comparison with other species and, under equivalent conditions, were about 50% lower than the repair rates of Arabidopsis thaliana (Ler ecotype). Collectively our results suggest that the susceptibility of G. magellanica plants to current ambient levels of solar UV‐B in southern Patagonia may be related to a low DNA repair capacity.     

Experimental growth responses to groundwater level variation and competition in five British wetland plant species

New experimental evidence from controlledglasshouse studies was used to testprevious empirical field observations aboutthe interactions of hydrological dynamicswith individual plant species in wetlandhabitats. Manipulation of water levels, andthe presence/ absence of competitorspecies, produced significant morphologicalresponses (e.g. resource allocation toabove- and below-ground structures; plantheight; leaf size; tiller production) inmature individuals of five freshwaterwetland plant species characteristic ofBritish northern poor-fen habitats. Theseresponses provide evidence for potentialadvantages in survival and ability tospread vegetatively. The data also providenew insight into factors controlling thedistribution of wetland plants alonggradients of water table level, in thepresence or absence of competing species.Although there were variations betweenspecies, the effects of competition were,in general, less than those attributable tohydrological regime.     

甘肃省中国种子植物特有属物种多样性保护优先地区分析

以甘肃省境内11个主要天然林区作为基本的地理单元,选择天然分布在各林区的中国种子植物特有属的物种丰富度、相对特有性和等级性作为评价指标,对各林区中国种子植物特有属物种多样性进行综合评价,确定出甘肃省中国种子植物特有属物种多样性保护的关键林区,并且运用互补性原理设计出最低保护区域组合及其优先序。分析得出关键保护林区为白龙江下游（白水江）林区、白龙江中上游林区和小陇山林区;最低保护区域组合按其优先序依次为白龙江下游（白水江）林区、白龙江中上游林区、东祁连山林区、小陇山林区和太子山,大夏河林区。     

Response of Eretmocerus eremicus to skylight and plant cues in a vertical flight chamber

In the southwestern United States, Eretmocerus eremicus (Hymenoptera: Aphelinidae) is a native parasitoid of the Bemisia complex (Homoptera: Aleyrodidae). However, little information currently exists on its potential as a biological control agent of whiteflies or on the factors that influence its tendencies to disperse. In this study, we examined the flight behavior of male and female E. eremicus in response to skylight (here simulated by a mercury-vapor lamp) and plant cues (a 550-nm filtered light) in a vertical flight chamber. Approximately 90% of the parasitoids took off in response to the skylight cue. Both sexes were capable of sustained flights in excess of 60 min; however, males had higher rates of climb than females (3.31±0.17 and 2.63±0.19 cm s^–1, respectively). When a plant cue was presented during the parasitoid's phototactic flight, four relatively distinct responses were observed. Fifty-one percent of the individuals responded to the plant cue throughout their flight by flying toward or by landing on the cue. The majority of these parasitoids were females. Approximately 12% of the wasps exhibited an intermittent, positive response to the plant cue. Twenty percent exhibited a `migratory' response. These parasitoids, which were predominantly males, failed to respond to the plant cue until they had flown for a considerable period. Finally, 17% failed to respond to the target during their flight. Approximately 37% of the individuals that showed a positive response to the plant cue actually landed on it and the majority of these were female. The differential response to the plant cue by male and female parasitoids could be, in part, because females are driven to locate hosts in which to oviposit, and males are driven to find mates.