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1.
The fungal communities associated with three bryophytes species (the liverwort Barbilophozia hatcheri, the mosses Chorisodontium aciphyllum and Sanionia uncinata) in the Fildes Region, King George Island, maritime Antarctica, were studied using clone library analysis. Fungal communities showed low diversity; the 680 clones belonged to 93 OTUs. Of these, 78 belonged to the phylum Ascomycota, 13 to the phylum Basidiomycota, 1 to the phylum Zygomycota, and 1 to an unknown phylum. Among the OTUs, the most common orders in the Ascomycota were Helotiales (42 OTUs) and Chaetothyriales (14 OTUs) and the most common orders in the Basidiomycota were Sebacinales (3 OTUs) and Platygloeales (3 OTUs). Most OTUs clustered within clades that contained phylotypes identified from samples in Antarctic or Arctic ecosystems or from bryophytes in other ecosystems. In addition, we found that host-related factor may shape the fungal communities associated with bryophytes in this region. This is the first systematic study of the fungal community in Antarctic bryophytes to be performed using culture-independent method and the results may improve understanding of the endophytic fungal evolution and ecology in the Antarctic ecosystem.  相似文献   

2.
In the present study, we surveyed the distribution and diversity of fungal assemblages associated with 10 species of marine animals from Antarctica. The collections yielded 83 taxa from 27 distinct genera, which were identified using molecular biology methods. The most abundant taxa were Cladosporium sp. 1, Debaryomyces hansenii, Glaciozyma martinii, Metschnikowia australis, Pseudogymnoascus destructans, Thelebolus cf. globosus, Pseudogymnoascus pannorum, Tolypocladium tundrense, Metschnikowia australis, and different Penicillium species. The diversity, richness, and dominance of fungal assemblages ranged among the host; however, in general, the fungal community, which was composed of endemic and cold-adapted cosmopolitan taxa distributed across the different sites of Antarctic Peninsula, displayed high diversity, richness, and dominance indices. Our results contribute to knowledge about fungal diversity in the marine environment across the Antarctic Peninsula and their phylogenetic relationships with species that occur in other cold, temperate, and tropical regions of the World. Additionally, despite their extreme habitats, marine Antarctic animals shelter cryptic and complex fungal assemblages represented by endemic and cosmopolitan cold-adapted taxa, which may represent interesting models to study different symbiotic associations between fungi and their animal hosts in the extreme conditions of Antarctica.  相似文献   

3.
The diversity of heterolobosean amoebae, important members of soil, marine and freshwater microeukaryote communities in the temperate zones, is greatly under-explored in high latitudes. To address this imbalance, we studied the diversity of this group of free-living amoebae in the Arctic and the Antarctic using culture dependent methods. Eighteen strain representatives of three heterolobosean genera, Allovahlkampfia Walochnik et Mulec, 2009 (1 strain), Vahlkampfia Chatton et Lalung-Bonnaier, 1912 (2) and Naegleria Alexeieff, 1912 (15) were isolated from 179 samples of wet soil and fresh water with sediments collected in 6 localities. The Allovahkampfia strain is the first representative of the genus from the Antarctic; 14 strains (7 from the Arctic, 7 from the Antarctic) of the highly represented genus Naegleria complete the ‘polar’ cluster of five Naegleria species previously known from the Arctic and Sub-Antarctic regions, whereas one strain enriches the ‘dobsoni’ cluster of Naegleria strains of diverse origin. Present isolations of Naegleria polaris De Jonckheere, 2006 from Svalbard, in the Arctic and Vega Island, in the Antarctic and N. neopolaris De Jonckheere, 2006 from Svalbard and Greenland in the Arctic, and James Ross Island, the Antarctic demonstrate their bipolar distribution, which in free-living amoebae has so far only been known for Vermistella Morand et Anderson, 2007.  相似文献   

4.
Fungal spores are widespread and common in the atmosphere. In this study, we use a metagenomic approach to study the fungal diversity in six total air samples collected from April to May 2012 in Seoul, Korea. This springtime period is important in Korea because of the peak in fungal spore concentration and Asian dust storms, although the year of this study (2012) was unique in that were no major Asian dust events. Clustering sequences for operational taxonomic unit (OTU) identification recovered 1,266 unique OTUs in the combined dataset, with between 223?96 OTUs present in individual samples. OTUs from three fungal phyla were identified. For Ascomycota, Davidiella (anamorph: Cladosporium) was the most common genus in all samples, often accounting for more than 50% of all sequences in a sample. Other common Ascomycota genera identified were Alternaria, Didymella, Khuskia, Geosmitha, Penicillium, and Aspergillus. While several Basidiomycota genera were observed, Chytridiomycota OTUs were only present in one sample. Consistency was observed within sampling days, but there was a large shift in species composition from Ascomycota dominant to Basidiomycota dominant in the middle of the sampling period. This marked change may have been caused by meteorological events. A potential set of 40 allergyinducing genera were identified, accounting for a large proportion of the diversity present (22.5?7.2%). Our study identifies high fungal diversity and potentially high levels of fungal allergens in springtime air of Korea, and provides a good baseline for future comparisons with Asian dust storms.  相似文献   

5.
This study assessed the diversity and distribution of endophytic fungal communities associated with the leaves and stems of four vascular plant species in the High Arctic using 454 pyrosequencing with fungal-specific primers targeting the ITS region. Endophytic fungal communities showed high diversity. The 76,691 sequences obtained belonged to 250 operational taxonomic units (OTUs). Of these OTUs, 190 belonged to Ascomycota, 50 to Basidiomycota, 1 to Chytridiomycota, and 9 to unknown fungi. The dominant orders were Helotiales, Pleosporales, Capnodiales, and Tremellales, whereas the common known fungal genera were Cryptococcus, Rhizosphaera, Mycopappus, Melampsora, Tetracladium, Phaeosphaeria, Mrakia, Venturia, and Leptosphaeria. Both the climate and host-related factors might shape the fungal communities associated with the four Arctic plant species in this region. These results suggested the presence of an interesting endophytic fungal community and could improve our understanding of fungal evolution and ecology in the Arctic terrestrial ecosystems.  相似文献   

6.
《Fungal biology》2023,127(4):997-1003
The Namib Desert of south-western Africa is one of the oldest deserts in the world and possesses unique geographical, biological and climatic features. While research through the last decade has generated a comprehensive survey of the prokaryotic communities in Namib Desert soils, little is yet known about the diversity and function of edaphic fungal communities, and even less of their responses to aridity. In this study, we have characterized soil fungal community diversity across the longitudinal xeric gradient across the Namib desert (for convenience, divided into the western fog zone, the central low-rainfall zone and the eastern high-rainfall zone), using internal transcribed sequence (ITS) metabarcoding. Ascomycota, Basidiomycota and Chytridiomycota consistently dominated the Namib Desert edaphic fungal communities and a core mycobiome composed of only 15 taxa, dominated by members of the class Dothideomycetes (Ascomycota), was identified. However, fungal community structures were significantly different in the fog, low-rainfall and high-rainfall zones. Furthermore, Namib Desert gravel plain fungal community assembly was driven by both deterministic and stochastic processes; the latter dominating in the all three xeric zones. We also present data that suggest that the inland limit of fog penetration represents an ecological barrier to fungal dispersal across the Namib Desert.  相似文献   

7.
Almost all of the investigated samples of the Arctic and Antarctic permafrost sediments of different genesis with ages from 5-10 thousand to 2-3 million years were found to contain viable micromycete and bacterial cells. The maximum amounts of viable cells of fungi (up to 10(4) CFU/g air-dried sample) and bacteria (up to 10(7)-10(9) CFU/g air-dried sample) were present in fine peaty sediment samples taken from different depths. The identified micromycetes belonged to more than 20 genera of the divisions Basidiomycota, Ascomycota, and Zygomycota, and some represented mitosporic fungi. Thawing the samples at 35 and 52 degrees C allowed the number of detected fungal genera to be increased by more than 30%. Aerobic heterotrophic prokaryotes were dominated by coryneform, nocardioform, and spore-forming microorganisms of the order Actinomycetales. Analysis of the isolated fungi and actinomycetes showed that most of them originated from the microbial communities of ancient terrestrial biocenoses.  相似文献   

8.
为研究竹叶兰Arundina graminifolia根系共生真菌的群落结构及对寄主的营养作用,采用高通量测序技术对野生竹叶兰根围土壤、根表、根内3个生态位真菌的种类及生物学功能进行鉴定与预测。所测竹叶兰根系共生真菌的平均辛普森指数为根围0.972、根 表0.905、根内0.703,说明3个位点都具有丰富的共生真菌;根围土壤真菌香农指数7.393显著高于根表和根内香农指数4.728和2.872,根表真菌多样性显著高于根内(P<0.05)。根表、根内有子囊菌门、担子菌门、罗兹壶菌门、壶菌门、毛霉菌门和被孢霉门,较根围土壤缺少球囊菌门和梳霉菌门;分子方差分析(AMOVA)证实3个生态位的真菌群落结构差异极显著(P=0.004)。各生态位丰度最高的20个真菌仅属于子囊菌和担子菌的40个属,其中子囊菌有30个属,种类数量占优势,而担子菌的单个种类丰度高于子囊菌。根围土壤腐生型真菌占优势(44.07%);根表主要有腐生、病原、共生型真菌;根内真菌营养类型差异大,样品M1的共生型真菌为优势类型(97.21%),M2、M3以腐生型占优(90.96%)。优势共生型真菌有革菌属Threlephora、根须腹菌属RhizopogonDentiscutata,腐生型真菌主要有长毛孔菌属FunaliaVuilleminia,均为担子菌。研究结果为揭示竹叶兰与根系真菌的营养关系以及共生真菌的开发提供了依据。  相似文献   

9.
山东省烟草根际土壤真菌多样性研究   总被引:1,自引:1,他引:1  
为了有助于研究烟草根际土壤真菌与根茎病害发生程度的相互关系,文中对采自山东省6个地区的122份烟草根际土壤样品进行了真菌的分离和培养,采用形态学方法进行鉴定,并分析了菌群的多样性组成。从山东烟草根际土壤中分离和鉴定出真菌22属79种,其中接合菌门4属6种,子囊菌门1属1种,无性型真菌17属72种。优势真菌种群为青霉属(Penicillium)、木霉属(Trichoderma)、镰孢菌属(Fusarium)和曲霉属(As-pergillus),所占分离真菌总菌数的比例分别为22.39%、13.62%、12.69%和9.88%。6个采样地区间真菌菌群的多样性水平存在差异,其中诸城地区的多样性指数(H′=2.066 6)、均匀度指数(J=0.689 8)和丰富度指数(R=3.730 1)均最高。  相似文献   

10.
Bates ST  Nash TH  Garcia-Pichel F 《Mycologia》2012,104(2):353-361
Molecular methodologies were used to investigate fungal assemblages of biological soil crusts (BSCs) from arid lands in the southwestern United States. Fungal diversity of BSCs was assessed in a broad survey that included the Chihuahuan and Sonoran deserts as well as the Colorado Plateau. At selected sites samples were collected along kilometer-scale transects, and fungal community diversity and composition were assessed based on community rRNA gene fingerprinting using PCR-denaturing gradient gel electrophoresis (DGGE). Individual phylotypes were characterized through band sequencing. The results indicate that a considerable diversity of fungi is present within crusted soils, with higher diversity being recovered from more successionally mature BSCs. The overwhelming majority of crust fungi belong to the Ascomycota, with the Pleosporales being widespread and frequently dominant. Beta diversity patterns of phylotypes putatively representing dominant members of BSC fungal communities suggest that these assemblages are specific to their respective geographic regions of origin.  相似文献   

11.
The diversity of sponge-associated fungi has been poorly investigated in remote geographical areas like Antarctica. In this study, 101 phenotypically different fungal isolates were obtained from 11 sponge samples collected in King George Island, Antarctica. The analysis of ITS sequences revealed that they belong to the phylum Ascomycota. Sixty-five isolates belong to the genera Geomyces, Penicillium, Epicoccum, Pseudeurotium, Thelebolus, Cladosporium, Aspergillus, Aureobasidium, Phoma, and Trichocladium but 36 isolates could not be identified at genus level. In order to estimate the potential of these isolates as producers of interesting bioactivities, antimicrobial, antitumoral and antioxidant activities of fungal culture extracts were assayed. Around 51 % of the extracts, mainly from the genus Geomyces and non identified relatives, showed antimicrobial activity against some of the bacteria tested. On the other hand, around 42 % of the extracts showed potent antitumoral activity, Geomyces sp. having the best performance. Finally, the potential of the isolated fungi as producers of antioxidant activity seems to be moderate. Our results suggest that fungi associated with Antarctic sponges, particularly Geomyces, would be valuable sources of antimicrobial and antitumoral compounds. To our knowledge, this is the first report describing the biodiversity and the metabolic potential of fungi associated with Antarctic marine sponges.  相似文献   

12.
烟草根际土壤真菌多样性的研究   总被引:2,自引:0,他引:2  
烟草土传病害发生普遍,危害严重。为深入了解烟草根际土壤真菌区系与土传病害间的相互关系,选取黑龙江、山东、广西和云南四省区的代表性烟田,开展了烟草根际土壤真菌多样性的研究。对采自上述四省区12个县市的224份烟草根际土壤样品进行了真菌的分离和培养,共分离获得1,278株真菌,通过形态学特征鉴定出真菌25属86种。其中接合菌门4属6种,子囊菌门1属1种,无性型真菌20属79种。通过分析发现,烟草根际土壤中的优势真菌种群及其菌株数量所占分离真菌总菌株数量的比例分别为:青霉属Penicillium 16.74%,木霉属Trichoderma 14.32%,镰孢菌属Fusarium 13.54%和曲霉属Aspergillus 11.50%。在12个采样地点中,山东诸城的多样性指数(H¢=2.0666)和均匀度指数(J=0.6898)最高,云南玉溪的丰富度指数(R=4.0687)最高。不同采样地点的烟草根际土壤真菌种群的相似性水平也存在差异,其中云南永胜和大理的烟草根际土壤真菌种群的相似性系数最高(Cj=0.9375),山东沂水和云南玉溪间的相似性最低(Cj=0.5217)。  相似文献   

13.
为了探究氧化石墨烯(GO)对黑麦草种子内生真菌群落结构和多样性的影响,将黑麦草种子在0.4%、0.8%和1.2%水平的GO溶液中胁迫4 d,采用高通量测序技术,分析GO胁迫下黑麦草种子内生真菌群落组成和多样性的变化。结果显示,4个样本所有样品共分离获得303种真菌,归属于10门39纲84目160科240属。在门分类水平上,子囊菌门(Ascomycota)和担子菌门(Basidiomycota)是主要的内生真菌类群;在属分类水平上,各处理的共有优势菌属为链格孢属(Alternaria)。不同GO处理黑麦草种子内生真菌群落结构存在差异,随着GO浓度的增加,子囊菌门的丰度出现下降,0.8%和1.2%GO处理较对照分别显著降低了19%和20%(P<0.05);所有GO处理的担子菌门丰度均显著高于对照(P<0.05);1.2%处理链格孢属的丰度较对照显著降低了37.36%。与对照相比,1.2%GO 处理内生真菌的丰富度和多样性显著增加,ACE、Chao1和Shannon指数分别增加了123.5%、127.4%和117.5%(P<0.05)。主坐标分析(PCoA)分析表明,1.2%GO处理内生真菌群落结构与其他处理有较大差异;线性判别分析(LEfSe)分析发现, 各处理差异指示种明显不同。可见,GO改变了黑麦草种子内生真菌群落的组成和多样性,尤其是高浓度处理(1.2%)。研究可为碳纳米材料暴露对共生物种的潜在影响研究提供参考。  相似文献   

14.
Inland river basins include critical habitats and provide various ecosystem services in extremely arid lands. However, we know little about the distribution patterns of soil fungal communities in these river basins. We investigated the distribution patterns of soil fungal communities from the riparian oasis zone (ROZ) to the circumjacent desert zone (CDZ) at the lower reaches of the Heihe River. The results indicated that soil fungal communities were mainly dominated by the phyla Ascomycota and Basidiomycota across all samples. The dominant soil fungi taxa were significantly different between ROZ and CDZ habitats at both the phylum and genus levels. Fungal alpha diversity was mainly affected by spatial factors and plant functional traits, and Pearson correlation analysis revealed that fungal alpha diversity was more closely related to plant functional traits than soil properties. Furthermore, fungal community structure was best explained by spatial factors and plant attributes (including plant diversity and plant functional traits). Together, our findings provide new insights into the significance of spatial factors and plant attributes for predicting distributions of fungal communities in arid inland river basins, which will help us better understand the functions and services of these ecosystems.  相似文献   

15.
A total of 61 species of hydroids, belonging to 13 families and 23 genera, were found during the Spanish Antarctic expedition Bentart 95 with the RV Hespérides. Ten of the species were identified only to generic level. The dominance of the subclass Leptothecatae, with 57 species, was remarkable. The remaining four species belong to the subclass Anthoathecatae. By far the most diverse family was the Sertulariidae, with 25 species (41%), followed by Haleciidae with nine species (15%) and Kirchenpaueriidae with six (10%). The family Plumulariidae, represented by one species of Nemertesia, is recorded for the first time from Antarctic waters. Eudendrium scotti, Perarella clavata and Symplectoscyphus hero are each recorded for the second time. Symplectoscyphus with 11 species was the dominant genus. Almost 60% of the species diversity is concentrated in just a little more than the 20% of genera. Nearly 70% of the species are endemic to Antarctic waters and 90% of them are restricted to Antarctic or Antarctic/sub-Antarctic waters.  相似文献   

16.
土壤真菌群落结构和多样性对植物生长起着重要作用,了解种植年限对薰衣草根际土壤真菌群落结构的影响对薰衣草病害防治和增产的研究具有重要意义。探究不同种植年限薰衣草根际土壤真菌群落结构和多样性特征,及其随种植年限的演变规律。采集新疆伊犁霍城县种植年限1、3、5 a,以及未种植薰衣草土壤,对ITS序列进行Illumina高通量测序。对测序结果进行分析,比较各样品组真菌多样性和群落分布规律及与种植年限的关联。结果表明,Alpha多样性分析显示随着种植年限的增加Shannon指数逐渐降低,而Chao1指数先降低后增高。在种植薰衣草土壤中共检测到12个门,28个纲,72个目,146个科,236个属。在门水平上,子囊菌门(Ascomycota)、担子菌门(Basidiomycota)、球囊菌门(Glomeromycota)为优势菌门。随着种植年限的增加,子囊菌门相对丰度逐渐降低,担子菌门逐渐增高,而球囊菌门先增加后降低。在属水平上优势菌属为Xylodon、锐孔菌属(Oxyporus)、镰刀菌属(Fusarium)、枝孢属(Cladosporium),均属于植物致病菌。随着种植年限的增加,Xylodon...  相似文献   

17.
Bryophytes comprise one of the richest microfungal microhabitats in the Antarctic environment. The maritime Antarctic is very vulnerable to rapid environmental change caused by global warming. The aim of this study was to investigate the importance of bryophytes as a microhabitat for fungal species in the maritime Antarctic by surveying endophytic fungal diversity from several bryophytes including Andreaea sp., Barbilophozia hatcheri, Chorisodontium aciphyllum, Polytrichum alpinum, Polytrichum strictum, Sanionia uncinata, and Warnstorfia sarmentosa. We collected 13 bryophyte samples at four localities on Barton Peninsula, King George Island. In total, 31 endophytic fungi morphotypes were isolated from bryophyte tissues by a thorough surface sterilization method. Using internal transcribed spacer sequence analysis, 16 endophytic fungal strains belonging to Ascomycota (12), Basidiomycota (1), Oomycota (1), and Zygomycota (2) phyla were obtained. Our results suggest the presence of a diverse range of fungal species even in a very limited area, and those bryophytes play an important role in conserving fungal diversity in this harsh environment. Growth rate measurements at a wide range of temperatures confirmed that most of the fungal strains were both mesophilic and psychrotolerant. This is the first report of endophytic fungi in Antarctic moss tissue by fluorescence in situ hybridization.  相似文献   

18.
Polaromonas is one of the most abundant genera found on glacier surfaces, yet its ecology remains poorly described. Investigations made to date point towards a uniform distribution of Polaromonas phylotypes across the globe. We compared 43 Polaromonas isolates obtained from surfaces of Arctic and Antarctic glaciers to address this issue. 16S rRNA gene sequences, intergenic transcribed spacers (ITS) and metabolic fingerprinting showed great differences between hemispheres but also between neighboring glaciers. Phylogenetic distance between Arctic and Antarctic isolates indicated separate species. The Arctic group clustered similarly, when constructing dendrograms based on 16S rRNA gene and ITS sequences, as well as metabolic traits. The Antarctic strains, although almost identical considering 16S rRNA genes, diverged into 2 groups based on the ITS sequences and metabolic traits, suggesting recent niche separation. Certain phenotypic traits pointed towards cell adaptation to specific conditions on a particular glacier, like varying pH levels. Collected data suggest, that seeding of glacial surfaces with Polaromonas cells transported by various means, is of greater efficiency on local than global scales. Selection mechanisms present of glacial surfaces reduce the deposited Polaromonas diversity, causing subsequent adaptation to prevailing environmental conditions. Furthermore, interactions with other supraglacial microbiota, like algae cells may drive postselectional niche separation and microevolution within the Polaromonas genus.  相似文献   

19.
Despite an increasing number of Antarctic soil diversity assessments, understanding of the bacterial community composition in the arid soil environments of the maritime/continental Antarctic transitional zone remains lacking. Most documented microbiological studies had focused on either the wetter environments of the Antarctic Peninsula/Scotia arc or the exceptionally arid deserts of the Dry Valleys of continental Antarctica. In this study, soil bacterial diversity from three relatively arid sites on Alexander Island and the physicochemical parameters that might influence it were assessed. In general, the study sites exhibited levels of pH, hydration and metal content different from previous reports of maritime or continental Antarctic soil habitats. Although the soil from Alexander Island exhibited similar phylum-level bacterial taxonomic composition to those of other cold and arid environments, each study site was found to harbour significantly different bacterial assemblages. The latter finding was supported by three complementary molecular methods selected to address different elements of diversity. Our analyses of the measured parameters suggest that the differences in bacterial communities were best explained by soil pH and copper content. Using these data, we suggest that soil pH might play an important role in structuring bacterial assemblage patterns across polar soils.  相似文献   

20.
【背景】大兴安岭地区是我国对气候变化响应最敏感的区域,而土壤微生物在维持寒区森林生态系统结构和功能中发挥重要作用。【目的】探究大兴安岭不同森林类型土壤微生物群落结构及与环境因子的关系。【方法】采用Illumina MiSeq高通量测序技术,分析3种典型森林(白桦林、落叶松林和樟子松林)土壤细菌和真菌群落组成和多样性。【结果】3种林型中共获得2 786个细菌操作分类单元(Operational Taxonomic Unit,OTU),隶属于38门531属,其中优势菌门为变形菌门(Proteobacteria, 31.45%-40.32%)、酸杆菌门(Acidobacteria, 14.24%-40.16%)和放线菌门(Actinobacteria,7.13%-22.15%);1803个真菌OTU隶属于8门263属,其中优势菌门为担子菌门(Basidiomycota,40.43%-62.75%)和子囊菌门(Ascomycota,35.81%-53.68%)。主坐标分析表明,3种林型中细菌和真菌群落组间差异远大于组内差异。Mantel检验结果显示:细菌群落结构与pH、总氮(Total Nitrogen,TN)、总磷(Total Phosphorus,TP)和含水量(Soil Water Content,SWC)具有显著相关性(P0.05),其中pH的相关性系数最大;真菌群落结构与SWC、TN和TP具有显著相关性(P0.05),其中TN的相关性系数最大。冗余分析结果发现,TP与变形菌门、担子菌门相对丰度呈显著正相关,TN和SWC与酸杆菌门、子囊菌门呈显著正相关,pH与放线菌门呈显著正相关(P0.05)。【结论】不同林型间土壤微生物群落结构存在显著差异,明晰其分布规律及主要环境驱动因子,是把握寒区森林生态系统过程的关键。  相似文献   

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