Carnivorous plants--classic perspectives and new research

The ranks of known carnivorous plants have grown to approximately 600 species. We are learning that the relationships between these feeders and their prey are more complex, and perhaps gentler, than previously suspected. Unfortunately, these extraordinary life forms are becoming extinct before we can even document them     

Flavoenzymes: diverse catalysts with recurrent features

Many biochemical processes exploit the extraordinary versatility of flavoenzymes and their flavin cofactors. Flavoproteins are now known to have a variety of folding topologies but a careful examination of their structures suggests that there are recurrent features in their catalytic apparatus. The flavoenzymes that catalyse dehydrogenation reactions share a few invariant features in the hydrogen-bond interactions between their protein and flavin constituents. Similarly, the positioning of the reactive part of the substrate with respect to the cofactor is generally conserved. Modulation of substrate and cofactor reactivity and exact positioning of the substrate are key elements in the mode of action of these enzymes.     

Phylogenetic relationships and evolutionary processes in East African cichlid fishes

Since their discovery almost one hundred years ago, the adaptive radiations of cichlid fishes in the largest East African lakes have fascinated biologists. They are a prime example of explosive speciation. Among vertebrates, these species assemblages are the most species rich and the most diverse, morphologically, ecologically and behaviorally. Recent phylogenetic analyses of molecular data and refined knowledge about the geological history of the East African lakes are throwing new light on the evolutionary history of these extraordinary fish faunas.     

On Ancestral Self-Fashioning: Photography in the Time of AIDS

This article looks at a series of photographic practices that emerged in Southwestern Uganda in the 1990s, in response to an emergent AIDS epidemic. In particular, it looks at the albums AIDS patients made in the final months of their lives. The article argues that these albums are an outcome both of a modernist, realist register and of an alternative set of locally meaningful dispositions toward the photograph. It is by keeping both of these frames in view that we are able to understand the extraordinary ongoing power these albums continue to have, long after the deaths of their producers, the AIDS patients themselves.     

Viscosometric investigation of the ordinary–extraordinary phase transition in dilute polylysine solutions

Low shear viscosities have been determined for a 1 mg/ml poly(L -lysine) solution as a function of added salt concentration in the region of the previously reported ordinary–extraordinary phase transition. The measured viscosities indicate that the polyions are far from completely extended at the transition. Estimates of the longest internal relaxation time for an equivalent free-draining Rouse-Zimm chain give τ ? 10^?5 sec, similar to that of the rapid, angle-independent component previously observed in the dynamic light-scattering correlation function at the transition. An unusual peak and valley are observed in the curve of [η]₀ versus [NaBr] in the transition region. Possible interpretations of these features, and their bearing on the nature of the extraordinary phase, are discussed.     

Toxins from cone snails: properties,applications and biotechnological production

Cone snails are marine predators that use venoms to immobilize their prey. The venoms of these mollusks contain a cocktail of peptides that mainly target different voltage- and ligand-gated ion channels. Typically, conopeptides consist of ten to 30 amino acids but conopeptides with more than 60 amino acids have also been described. Due to their extraordinary pharmacological properties, conopeptides gained increasing interest in recent years. There are several conopeptides used in clinical trials and one peptide has received approval for the treatment of pain. Accordingly, there is an increasing need for the production of these peptides. So far, most individual conopeptides are synthesized using solid phase peptide synthesis. Here, we describe that at least some of these peptides can be obtained using prokaryotic or eukaryotic expression systems. This opens the possibility for biotechnological production of also larger amounts of long chain conopeptides for the use of these peptides in research and medical applications.     

Asymmetric long-wavelength surface waves in magnetized plasma waveguides entirely filled with plasma

A theoretical study is made of the dispersion properties of electromagnetic surface waves with arbitrary azimuthal mode numbers and with a small axial wavenumber in cylindrical metal waveguides entirely filled with a radially inhomogeneous, cold, magnetized plasma. The frequency ranges in which the extraordinary polarized waves under analysis can exist are found, and the conditions for their resonant interaction with an ordinary bulk wave are determined. The eigenfrequency of these surface waves is investigated as a function of the plasma parameters, the axial wavenumber, and the azimuthal mode number. Simple analytic expressions are derived for the eigenfrequencies of the surface waves under study propagating in a homogeneous plasma waveguide.     

Morphology and sexual dimorphism of the New Caledonian Crow Corvus moneduloides, with notes on its behaviour and ecology

New Caledonian Crows Corvus moneduloides are known to be extraordinary tool makers and users, but little is known of other aspects of their biology. Here, we report recent field observations of their behaviour and ecology, along with measurements of 19 morphological traits and two flight performance parameters taken from 22 captured Crows. These measurements showed that the Crows were sexually dimorphic in size (the males were larger) but not in shape. We also found that the crows lived in mixed-sex groups, and we observed juvenile-type begging behaviour and feeding by regurgitation, which supports the hypothesis that these may be family groups.     

The ankyrin repeat: a diversity of interactions on a common structural framework.

The ankyrin repeat is one of the most common protein sequence motifs. Recent X-ray and NMR structures of ankyrin-repeat proteins and their complexes have provided invaluable insights into the molecular basis of the extraordinary variety of biological activities of these molecules. In particular, they have begun to reveal how a large family of structurally related proteins can interact specifically with such a diverse array of macromolecular targets.     

Directed evolution of fungal laccases

Fungal laccases are generalists biocatalysts with potential applications that range from bioremediation to novel green processes. Fuelled by molecular oxygen, these enzymes can act on dozens of molecules of different chemical nature, and with the help of redox mediators, their spectrum of oxidizable substrates is further pushed towards xenobiotic compounds (pesticides, industrial dyes, PAHs), biopolymers (lignin, starch, cellulose) and other complex molecules. In recent years, extraordinary efforts have been made to engineer fungal laccases by directed evolution and semi-rational approaches to improve their functional expression or stability. All these studies have taken advantage of Saccharomyces cerevisiae as a heterologous host, not only to secrete the enzyme but also, to emulate the introduction of genetic diversity through in vivo DNA recombination. Here, we discuss all these endeavours to convert fungal laccases into valuable biomolecular platforms on which new functions can be tailored by directed evolution.     

Visual optics: The sandlance eye breaks all the rules

The eyes of the sandlance differ from those of other fish, both optically and in the kinds of movements they make. The predatory behaviour of these tiny fish not only makes their lifestyle similar to that of a chameleon, but has led to several extraordinary examples of convergence in the visual system.     

Do orphan G-protein-coupled receptors have ligand-independent functions? New insights from receptor heterodimers

G-protein-coupled receptors (GPCRs) are important drug targets and are involved in virtually every biological process. However, there are still more than 140 orphan GPCRs, and deciphering their function remains a priority for fundamental and clinical research. Research on orphan GPCRs has concentrated mainly on the identification of their natural ligands, whereas recent data suggest additional ligand-independent functions for these receptors. This emerging concept is connected with the observation that orphan GPCRs can heterodimerize with GPCRs that have identified ligands, and by so doing regulate the function of the latter. Pairing orphan GPCRs with their potential heterodimerization partners will have a major impact on our understanding of the extraordinary diversity offered by GPCR heterodimerization and, in addition, will constitute a novel strategy to elucidate the function of orphan receptors that needs to be added to the repertoire of 'deorphanization' strategies.     

Progress and prospects of applying carbon-based materials (and nanomaterials) to accelerate anaerobic bioprocesses for the removal of micropollutants

Carbon-based materials (CBM), including activated carbon (AC), activated fibres (ACF), biochar (BC), nanotubes (CNT), carbon xenogels (CX) and graphene nanosheets (GNS), possess unique properties such as high surface area, sorption and catalytic characteristics, making them very versatile for many applications in environmental remediation. They are powerful redox mediators (RM) in anaerobic processes, accelerating the rates and extending the level of the reduction of pollutants and, consequently, affecting positively the global efficiency of their partial or total removal. The extraordinary conductive properties of CBM, and the possibility of tailoring their surface to address specific pollutants, make them promising as catalysts in the treatment of effluents containing diverse pollutants. CBM can be combined with magnetic nanoparticles (MNM) assembling catalytic and magnetic properties in a single composite (C@MNM), allowing their recovery and reuse after the treatment process. Furthermore, these composites have demonstrated extraordinary catalytic properties. Evaluation of the toxicological and environmental impact of direct and indirect exposure to nanomaterials is an important issue that must be considered when nanomaterials are applied. Though the chemical composition, size and physical characteristics may contribute to toxicological effects, the potential toxic impact of using CBM is not completely clear and is not always assessed. This review gives an overview of the current research on the application of CBM and C@MNM in bioremediation and on the possible environmental impact and toxicity.     

Symbiont-mediated protection

Despite the fact that all vertically transmitted symbionts sequester resources from their hosts and are therefore costly to maintain, there is an extraordinary diversity of them in invertebrates. Some spread through host populations by providing their hosts with fitness benefits or by manipulating host sex ratio, but some do not: their maintenance in host lineages remains an enigma. In this review, I explore the evolutionary ecology of vertically transmitted symbionts and their impact on host resistance, and provide an overview of the evidence for the three-way interactions between these symbionts, natural enemies and invertebrate hosts. A number of recent empirical and theoretical studies suggest that vertically transmitted symbionts may protect their hosts from pathogens. If this 'symbiont-mediated protection' is widespread, it is likely that vertically transmitted symbionts contribute significantly to variation in measures of invertebrate resistance to natural enemies.     

Global and targeted quantitative proteomics for biomarker discovery

The extraordinary developments made in proteomic technologies in the past decade have enabled investigators to consider designing studies to search for diagnostic and therapeutic biomarkers by scanning complex proteome samples using unbiased methods. The major technology driving these studies is mass spectrometry (MS). The basic premises of most biomarker discovery studies is to use the high data-gathering capabilities of MS to compare biological samples obtained from healthy and disease-afflicted patients and identify proteins that are differentially abundant between the two specimen. To meet the need to compare the abundance of proteins in different samples, a number of quantitative approaches have been developed. In this article, many of these will be described with an emphasis on their advantageous and disadvantageous for the discovery of clinically useful biomarkers.     

p63 Is essential for the proliferative potential of stem cells in stratified epithelia

The distinguishing feature of adult stem cells is their extraordinary capacity to divide prior to the onset of senescence. While stratified epithelia such as skin, prostate, and breast are highly regenerative and account disproportionately for human cancers, genes essential for the proliferative capacity of their stem cells remain unknown. Here we analyze p63, a gene whose deletion in mice results in the catastrophic loss of all stratified epithelia. We demonstrate that p63 is strongly expressed in epithelial cells with high clonogenic and proliferative capacity and that stem cells lacking p63 undergo a premature proliferative rundown. Additionally, we show that p63 is dispensable for both the commitment and differentiation of these stem cells during tissue morphogenesis. Together, these data identify p63 as a key, lineage-specific determinant of the proliferative capacity in stem cells of stratified epithelia.     

Insights into the microbial world associated with ants

Insects are among the most successful animals of the world in terms of species richness as well as abundance. Their biomass exceeds that of mammals by far. Among insects, ants are of particular interest not only because of their enormous ecological role in many terrestrial ecosystems, but also because they have developed an impressive behavioural repertoire. In fact, a key feature of the evolutionary success of ants is their ability to form complex societies with division of labour among individuals in a colony belonging to different castes such as workers and soldiers. In addition to these complex social interactions of ants, they have shown an extraordinary capacity to build up close associations with other organisms such as other insects, plants, fungi and bacteria. In the present review we attempt to provide an overview of the various symbiotic interactions that ants have developed with microorganisms.     

Cyanobacteria as potential options for environmental sustainability — promises and challenges

Cyanobacteria represent an ancient group of photosynthetic prokaryotes, whose ubiquity, metabolic flexibility and adaptive abilities have made them a subject of research worldwide. These structurally simple organisms combine in themselves interesting facets of plant and bacterial metabolism, which is amenable to genetic exploitation. Despite their globally recognized significance in the sustenance of fertility in rice based cropping systems, they have not been tapped for their extraordinary repertoire of activities, especially their beneficial role as biological agents in remediation and amelioration of soil and water environment and as sinks for greenhouse gases. The information available on these aspects and future lines of research for more efficient utilization of these microorganisms is presented.     

Mechanisms Responsible for Extraordinary Optical Transmission Through One-Dimensional Periodic Arrays of Infinite Sub-wavelength Slits: the Origin of Previous EOT Position Prediction Misinterpretations

We have studied theoretically and numerically the effect of extraordinary optical transmission of light propagating through the one-dimensional periodic arrays of infinite slits with sub-wavelength dimensions. In our study, we have concentrated on mechanisms which are responsible for this effect. Within our analysis, we have attempted to draw the attention towards the origin and reasons of earlier misinterpretations concerning the spectral position of EOT prediction and the related role of surface plasmon polaritons in manifestation of the effect. Using the sequence of suitable parameter two-dimensional spaces (in terms of structure period-filling factor; thickness-wavelength; wavelength-angle), we were able to look into subtle physical mechanisms operating in the background of this extraordinary optical transmission effect. To study these effects associated with the extraordinary optical transmission, we have applied our efficient two-dimensional numerical technique based on the rigorous coupled-wave analysis. Within the thickness-wavelength parameter space, we have been able to identify and describe three distinct interaction regions, with specific behaviour. Finally, we have proposed and discussed the supporting mechanism explaining the interaction, based on the interference of resonant and non-resonant contributions at the slit openings.