A BAYESIAN ANALYSIS TO ESTIMATE LOSS IN SQUID CATCH DUE TO THE IMPLEMENTATION OF A SEA LION POPULATION MANAGEMENT PLAN

This study estimates the effect of a sea lion ( Phocarctos hookeri ) population management plan on both the sea lion population and the associated squid ( Nototodarus sloanii ) fishery. The goal of the management plan is to rebuild the sea lion population and involves closing the squid fishery when a threshold level of sea lions have been caught. The threshold level is calculated from a generalized simulation analysis which conservatively allows for adequate population rebuilding for a number of different species and populations. Our analysis uses Bayesian theory to describe uncertainty in the sea lion population site and squid catch under the implementation of the management plan. The priors represent this particular sea lion population, and the analysis represents expectation rather than calculating conservative levels of safe fishing-related mortality. The results show that the squid catch is very sensitive to whether or not the squid fishery is closed when it exceeds the threshold level for sea lion bycatch. The sea lion population size is much less sensitive to the closure of the squid fishery. For an economically important fishery, the estimates of uncertainty in both loss of catch and increase in sea lion population are needed to allow informed decision-making about trade-offs between sea lion conservation and full exploitation of the fishery.     

A two-active site one-polypeptide enzyme: the isomaltase from sea lion small intestinal brush-border membrane. Its possible phylogenetic relationship with sucrase-isomaltase

The enzyme responsible for all of the isomaltase activity and much of the maltase activity in the small intestine of the Californian sea lion (Zalophus californianus) was isolated by detergent solubilization of the brush-border membrane, followed by immunoadsorption chromatography using antibodies directed against rabbit sucrase-isomaltase. In 0.1% Triton X-100, sea lion isomaltase occurs as a monomer of Mr = 245,000 and is composed of a single polypeptide chain. As judged from the stoichiometry of the covalent binding of the affinity label, conduritol-B-epoxide, this polypeptide chain carries two enzymatically active sites; they are apparently identical and do not show either positive or negative cooperativity. In addition to cross-reacting immunologically with rabbit sucrase-isomaltase, sea lion isomaltase has similar overall enzymatic properties, with the exception of not hydrolyzing sucrose. The Alaskan fur seal (Collarhinus ursinus) has a two-active site isomaltase; however, in contrast to the sea lion, this animal is endowed with a small but significant sucrase activity. Along with (fully active) pro-sucrase-isomaltase, sea lion isomaltase is one of the very few examples of enzymes with more than one active site on a single polypeptide chain acting "in parallel" (rather than "in series"). Furthermore, this enzyme triggers some interesting questions on the phylogenetical pedigree of small intestinal sucrase-isomaltase.     

Steller sea lion spatial‐use patterns derived from a Bayesian model of opportunistic observations

Despite acquisition of a substantial catalog of telemetry data from Steller sea lions (Eumetopias jubatus) over the past two decades, scientists still lack comprehensive regionally explicit knowledge about Steller sea lion habitat use. The Platforms of Opportunity data contain records of Steller sea lion sightings throughout the species’ entire range and have potential to fill gaps in knowledge about their spatial use; however, the data have not previously been used because effort (e.g., time spent surveying or area sampled) was not recorded when sightings were obtained. For this study a novel approach was used to overcome the lack of effort data through development of an effort index and a Bayesian negative binomial model. The model quantified Steller sea lion encounter rates and associated uncertainty within 15 × 15 km² grid cells across the species’ entire range. Year‐round, as well as breeding and nonbreeding season encounter rates were estimated. The results of this analysis identify several previously undocumented areas of high use by Steller sea lions, indicate that only 37% of Steller sea lion high‐use areas fall within designated critical habitat, and demonstrate that use of depth and distance from shore as indicators of Steller sea lion habitat is contraindicated.     

Lipoproteins in pinnipeds: analysis of a high molecular weight form of apolipoprotein E

We have examined the apolipoprotein content of the lipoproteins of several marine mammals by sodium dodecyl sulfate-polyacrylamide gel electrophoresis. Their apolipoprotein (apo) B-100, apoB-48, and apoA-I migrated to virtually the same position as the comparable human apolipoproteins. In cetaceans (bottlenose dolphins and killer whales), the molecular mass of the apoE was identical to that of human apoE (35 kDa). In contrast, in the lipoproteins of pinnipeds (harbor seals, sea lions, and walrus) there was no protein comparable in size to human apoE; however, there were two proteins in the 40- to 44-kDa range. The protein with the higher apparent molecular weight (44 kDa) was apoA-IV, as determined by NH2-terminal amino acid sequencing. Sequencing of the NH2-terminal 15 amino acids of the lower molecular weight protein (40-42 kDa) revealed no obvious homology with human apoE. However, a human apoE-specific monoclonal antibody, 1D7, bound to the 40- to 42-kDa protein, allowing us to identify that protein as apoE. Sequencing of sea lion apoE cDNA clones demonstrated that sea lion apoE is 311 amino acids in length, 12 residues longer than human apoE. All 12 additional residues are located in the NH2-terminal 31 amino acids, a region that has extremely low homology with the NH2-terminal portion of human apoE. The remainder of the sea lion apoE sequence is 74% homologous to human apoE. The sea lion apoE cDNA was expressed in Chinese hamster ovary (CHO) cells as well as CHO ldlD cells, a cell line that is deficient in O-glycosylation of proteins. The size of the sea lion apoE secreted by these two cell lines, compared with the apoE in sea lion plasma, indicated that the predominant form of apoE in sea lion plasma must be posttranslationally modified. Thus, our studies have demonstrated that the higher apparent molecular weight of pinniped (sea lion) apoE is due to a longer polypeptide chain as well as posttranslational modification of the protein.     

Assessment of Competition between Fisheries and Steller Sea Lions in Alaska Based on Estimated Prey Biomass,Fisheries Removals and Predator Foraging Behaviour

A leading hypothesis to explain the dramatic decline of Steller sea lions (Eumetopias jubatus) in western Alaska during the latter part of the 20th century is a change in prey availability due to commercial fisheries. We tested this hypothesis by exploring the relationships between sea lion population trends, fishery catches, and the prey biomass accessible to sea lions around 33 rookeries between 2000 and 2008. We focused on three commercially important species that have dominated the sea lion diet during the population decline: walleye pollock, Pacific cod and Atka mackerel. We estimated available prey biomass by removing fishery catches from predicted prey biomass distributions in the Aleutian Islands, Bering Sea and Gulf of Alaska; and modelled the likelihood of sea lions foraging at different distances from rookeries (accessibility) using satellite telemetry locations of tracked animals. We combined this accessibility model with the prey distributions to estimate the prey biomass accessible to sea lions by rookery. For each rookery, we compared sea lion population change to accessible prey biomass. Of 304 comparisons, we found 3 statistically significant relationships, all suggesting that sea lion populations increased with increasing prey accessibility. Given that the majority of comparisons showed no significant effect, it seems unlikely that the availability of pollock, cod or Atka mackerel was limiting sea lion populations in the 2000s.     

The cytotoxicity and genotoxicity of hexavalent chromium in Steller sea lion lung fibroblasts compared to human lung fibroblasts

In this study we directly compared soluble and particulate chromate cytotoxicity and genotoxicity in human (Homo sapiens) and sea lion (Eumetopias jubatus) lung fibroblasts. Our results show that hexavalent chromium induces increased cell death and chromosome damage in both human and sea lion cells with increasing intracellular chromium ion levels. The data further indicate that both sodium chromate and lead chromate are less cytotoxic and genotoxic to sea lion cells than human cells, based on an administered dose. Differences in chromium ion uptake explained some but not all of the reduced amounts of sodium chromate-induced cell death. By contrast, uptake differences could explain the differences in sodium chromate-induced chromosome damage and particulate chromate-induced toxicity. Altogether they indicate that while hexavalent chromium induces similar toxic effects in sea lion and human cells, there are different mechanisms underlying the toxic outcomes.     

A bald encounter: hairless southern sea lion at the Falkland Islands

A hairless adult male southern sea lion (Otaria flavescens) was sighted at Sea Lion Island, Falkland Islands, on the 14th of August 2009. The sea lion was observed on several further occasions and was defending a small harem consisting of four females. To our knowledge, this is the first report of an apparently healthy sea lion being entirely hairless with the exception of vibrissae on the muzzle.     

Ancient DNA analysis of the Japanese sea lion (Zalophus californianus japonicus Peters, 1866): preliminary results using mitochondrial control-region sequences

In this study, we successfully extracted ancient DNA from skeletal remains of the Japanese sea lion-a species that is practically extinct-from archaeological sites and determined a partial sequence of its mitochondrial DNA control region. A molecular phylogenetic tree constructed by the neighbor-joining (NJ) method showed that the sequences from Japanese sea lions clustered together, with a high bootstrap value, and that this cluster was closest to the California sea lion cluster. The distinctly divergent cluster of Japanese sea lions reflected the morphological classification of these animals as a distinct species of the genus Zalophus; however, proximity to the California sea lion cluster simultaneously implied conformation with the traditional classification of these animals as a subspecies of Zalophus californianus. The average amount of nucleotide substitution between the Japanese and California sea lions was 7.02%. The Japanese and California sea lions were estimated to have diverged 2.2 million years ago, i.e., in the late Pliocene Epoch. This is the first report on a genetic analysis of the Japanese sea lion.     

A CRITICAL REVIEW OF THE REGIME SHIFT-"JUNK FOOD"-NUTRITIONAL STRESS HYPOTHESIS FOR THE DECLINE OF THE WESTERN STOCK OF STELLER SEA LION

Steller sea lions ( Eumetopias jubatus ) in the central and western Gulf of Alaska, Aleutian Islands, and Bering Sea have declined by 80% in the last 30 yr. One hypothesis for the decline in this western Steller sea lion population is that a climate regime shift in 1976–1977 changed the species composition of the fish community and reduced the nutritional quality (energy density) of the sea lion prey field. This in turn led to nutritional stress and reduced individual fitness, survival, and reproduction of sea lions. Implications of this regime shift-"junk food" hypothesis are that (1) the recruitment and abundance of supposed high quality species ( e.g. , Pacific herring, Clupea pallasi ) decreased while those of supposed low quality ( e.g. , species in the family Gadidae) increased following the regime shift, (2) Steller sea lion diets shifted in response to this change in fish community structure, and (3) a diet composed principally of gadids ( e.g. , walleye pollock, Theragra chalcogramma ) is detrimental to sea lion fitness and survival. We examine data relating to each of these implications and find little support for the hypothesis that increases in the availability and consumption of gadids following the regime shift are primarily responsible for the decline of the western population of Steller sea lion.     

Notes on New Zealand mammals 8. Predation on nesting southern royal albatrosses Diomedea epomophora by a New Zealand sea lion Phocarctos hookeri

Abstract

This note documents unusual predation of southern royal albatrosses Diomedea epomophora on land by an individual New Zealand sea lion Phocarctos hookeri. During a survey of albatross nests on Campbell Island in the New Zealand sub‐antarctic in January 2005, 128 corpses of adult albatrosses were found at or near nests within a 230 ha area. Flattened vegetation and flipper prints near the nests suggested sea lion predation, and subsequently a male sea lion was found near a line of freshly killed birds. The predation rate was estimated to be at least seven birds per day over a number of weeks; similar skeletal remains from the previous year were observed in a neighbouring area. The impact of one threatened species on another can be a dilemma for conservation managers. In this case, apparently only one male sea lion was involved and, because of the ongoing impact to the albatross population, permission was obtained to cull that individual on 17 January 2005. No further incidents were observed over the following three seasons (2006–08).     

Effects of hookworms (<Emphasis Type="Italic">Uncinaria</Emphasis> sp.) on the early growth and survival of New Zealand sea lion (<Emphasis Type="Italic">Phocarctos hookeri</Emphasis>) pups

Parasites can have both direct and indirect impacts on organisms through changes in health, growth, reproductive success, behaviour and survival. This research investigates the effects of hookworms (Uncinaria sp.) on the growth and mortality of New Zealand sea lion (NZ sea lion, Phocarctos hookeri) pups between birth and 3 months of age. NZ sea lion pups that received ivermectin treatment to reduce their hookworm burden had higher growth rates. Hookworm infection had no significant effect on mortality rate except when overall mortality was high during epidemics caused by other pathogens. Understanding the impacts of parasites on wild populations of pinnipeds is important for the management of the species, particularly when the species is threatened, as is the case for the NZ sea lion. There are at least two reasons for this: first, to quantify the impact of the parasite on parameters of population dynamics such as offspring survival and, as a consequence, female reproductive output; and second, to gain sufficient knowledge of the host/parasite dynamics to allow the balance to be manipulated in favour of the host should this be required for conservation management.     

No Evidence of Metabolic Depression in Western Alaskan Juvenile Steller Sea Lions (Eumetopias jubatus)

Steller sea lion (Eumetopias jubatus) populations have undergone precipitous declines through their western Alaskan range over the last four decades with the leading hypothesis to explain this decline centering around changing prey quality, quantity, or availability for this species (i.e., nutritional stress hypothesis). Under chronic conditions of reduced food intake sea lions would conserve energy by limiting energy expenditures through lowering of metabolic rate known as metabolic depression. To examine the potential for nutritional stress, resting metabolic rate (RMR) and body composition were measured in free-ranging juvenile Steller sea lions (N = 91) at three distinct geographical locations (Southeast Alaska, Prince William Sound, Central Aleutian Islands) using open-flow respirometry and deuterium isotope dilution, respectively. Average sea lion RMR ranged from 6.7 to 36.2 MJ d⁻¹ and was influenced by body mass, total body lipid, and to a lesser extent, ambient air temperature and age. Sea lion pups captured in the Aleutian Islands (region of decline) had significantly greater body mass and total body lipid stores when compared to pups from Prince William Sound (region of decline) and Southeast Alaska (stable region). Along with evidence of robust body condition in Aleutian Island pups, no definitive differences were detected in RMR between sea lions sampled between eastern and western populations that could not be accounted for by higher percent total body lipid content, suggesting that that at the time of this study, Steller sea lions were not experiencing metabolic depression in the locations studied.     

DNA metabarcoding for diet analysis and biodiversity: A case study using the endangered Australian sea lion (Neophoca cinerea)

The analysis of apex predator diet has the ability to deliver valuable insights into ecosystem health, and the potential impacts a predator might have on commercially relevant species. The Australian sea lion (Neophoca cinerea) is an endemic apex predator and one of the world's most endangered pinnipeds. Given that prey availability is vital to the survival of top predators, this study set out to understand what dietary information DNA metabarcoding could yield from 36 sea lion scats collected across 1,500 km of its distribution in southwest Western Australia. A combination of PCR assays were designed to target a variety of potential sea lion prey, including mammals, fish, crustaceans, cephalopods, and birds. Over 1.2 million metabarcodes identified six classes from three phyla, together representing over 80 taxa. The results confirm that the Australian sea lion is a wide‐ranging opportunistic predator that consumes an array of mainly demersal fauna. Further, the important commercial species Sepioteuthis australis (southern calamari squid) and Panulirus cygnus (western rock lobster) were detected, but were present in <25% of samples. Some of the taxa identified, such as fish, sharks and rays, clarify previous knowledge of sea lion prey, and some, such as eel taxa and two gastropod species, represent new dietary insights. Even with modest sample sizes, a spatial analysis of taxa and operational taxonomic units found within the scat shows significant differences in diet between many of the sample locations and identifies the primary taxa that are driving this variance. This study provides new insights into the diet of this endangered predator and confirms the efficacy of DNA metabarcoding of scat as a noninvasive tool to more broadly define regional biodiversity.     

Anthropogenic causes of the western Steller sea lion Eumetopias jubatus population decline and their threat to recovery

• 1 The western Steller sea lion Eumetopias jubatus population has experienced a chronic decline since the 1960s. The causes are likely multifactorial and a combination of anthropogenic and natural factors. A draft revised recovery plan for the Steller sea lion has been published by the US National Marine Fisheries Service, listing both anthropogenic and natural factors that may have contributed to the observed decline or which may be a threat to the recovery of the western Steller sea lion population. The purpose of this review is to consider the anthropogenic threats to this stock.
• 2 Anthropogenic sources of mortality include fisheries competition resulting in nutritional stress, mortality incidental to commercial fisheries (i.e. fisheries by‐catch), subsistence hunts, legal and illegal shooting, commercial hunts, anthropogenic‐related contamination, and research‐induced mortalities.
• 3 We present evidence that the following anthropogenic factors likely contributed to the decline of the western Steller sea lion population over the last 40 years: (i) mortality incidental to commercial fisheries (i.e. by‐catch); (ii) commercial hunting of western Steller sea lions; and (iii) legal and illegal shooting; whereas the subsistence hunts for western Steller sea lions and mortality incidental to research were not likely to be contributors to the observed decline.
• 4 Further, we present evidence that the following can be excluded as significant anthropogenic threats to the recovery of the western Steller sea lion population: (i) mortality incidental to commercial fishing; (ii) legal and illegal shooting; (iii) commercial hunts of Steller sea lions; (iv) subsistence hunting; and (v) mortality incidental to research.
• 5 Competition with fisheries resulting in nutritional stress, and the potential impacts of contaminants, are two anthropogenic factors that should continue to be a priority for the various organizations currently doing research on this population.

     

Depth and movement behaviour of the Pacific sleeper shark in the north-east Pacific Ocean

Satellite-linked radio telemetry was used to study the geographic movements and vertical movement behaviour of the Pacific sleeper shark Somniosus pacificus . The fish were tagged near Steller sea lion Eumetopias jubatus rookeries in the Gulf of Alaska during periods when Steller sea lions pups were most vulnerable to predation; when Steller sea lion pups first enter the water (July to August) and when Steller sea lion pups are weaned (April to May). Final locations recovered from most Pacific sleeper sharks (76%) were within 100 km of release locations, 16% were within 100–250 km and 8% were within 250–500 km. The most striking behavioural feature was their extensive, nearly continuous vertical movements. Median daily depth range was 184 m; the most time (61%) was spent between 150 and 450 m, but ascents above 100 m were common (58% of days). Median vertical movement rate was 6 km day⁻¹ and steady. The longest period of continuous vertical movement (> 60 m h⁻¹) was 330 h. Systematic vertical oscillations were most common (60%), followed by diel vertical migrations (25%) and irregular vertical movements (15%). The Pacific sleeper sharks travelled below the photic zone during the day and approached the surface at night. Pacific sleeper sharks appear to employ a stealth and ambush hunting strategy that incorporates slow vertical oscillations to search for prey, and cryptic colouration and cover of darkness to avoid detection by potential prey. The depth and geographic range of Pacific sleeper shark and Steller sea lions overlap near four important Steller sea lion rookeries in the northern Gulf of Alaska, so the potential exists for predation to occur. None of the tissues in the stomachs of the 198 Pacific sleeper sharks collected during a companion diet study, however, were identified as Steller sea lion.     

Growth under uncertainty: The influence of marine variability on early development of Galapagos sea lions

Development implies a change in allocation of resources from somatic growth to reproduction. In a highly variable environment, growth can vary from year to year thereby influencing the long‐term life history perspective. The Galapagos sea lion (Zalophus wollebaeki) lives in a highly unpredictable marine environment in which food abundance varies not only seasonally, but also annually due to El Niño. Galapagos sea lions are restricted to a patch of cold upwelling waters surrounding the archipelago and are closely tied to land as nursing females alternate between foraging at sea and nursing ashore. Therefore, their offspring are especially vulnerable to ocean warming causing reduced food abundance. We found a significant correlation between sea surface temperature (SST) and early growth: Both mass at birth and linear growth within the first 2 mo of life correlated negatively with SST. Absolute mass gain was higher for males, but both sexes gained equally 1.9% of birth mass per day. Until the age of 3 yr male and female juveniles showed similar growth to an asymptotic mass of 40 and 35 kg, respectively. As a consequence of the highly variable environment, the plasticity in growth strategy of Galapagos sea lion juveniles appears wider than that of all other sea lions allowing them to cope with poor conditions.     

Pathology and preliminary characterization of a parapoxvirus isolated from a California sea lion (Zalophus californianus)

Cutaneous pox-like lesions are a common complication in the rehabilitation of pinnipeds. However, the exact identity, taxonomy, and host range of pinniped parapoxviruses remain unknown. During a poxvirus outbreak in May 2003 in California sea lions (Zalophus californianus) at a marine mammal rehabilitation facility, multiple raised, firm, 1-3-cm skin nodules from the head, neck, and thorax of one sea lion weanling pup that spontaneously died were collected. Histologically, the nodules were characterized by inflammation and necrosis of the dermis and epidermis, acanthosis, and ballooning degeneration of the stratum spinosum. Large, coalescing eosinophilic cytoplasmic inclusions were observed in the ballooned cells. A parapoxvirus (sea lion poxvirus 1, SLPV-1) was isolated on early passage California sea lion kidney cells inoculated with a tissue homogenate of a skin nodule. The morphology of the virions on electron microscopy was consistent with that of parapoxviruses. Partial sequencing of the genomic region encoding the putative major virion envelope antigen p42K confirmed the assignment of the sea lion poxvirus to the genus Parapoxvirus. Although SLPV-1 is most closely related to the poxvirus of harbor seals of the European North Sea, it is significantly different from orf virus, bovine papular stomatitis virus, pseudocowpox virus and the parapoxvirus of New Zealand red deer.     

The olfactory receptor gene repertoires in secondary-adapted marine vertebrates: evidence for reduction of the functional proportions in cetaceans

An olfactory receptor (OR) multigene family is responsible for the well-developed sense of smell possessed by terrestrial tetrapods. Mammalian OR genes had diverged greatly in the terrestrial environment after the fish-tetrapod split, indicating their importance to land habitation. In this study, we analysed OR genes of marine tetrapods (minke whale Balaenoptera acutorostrata, dwarf sperm whale Kogia sima, Dall's porpoise Phocoenoides dalli, Steller's sea lion Eumetopias jubatus and loggerhead sea turtle Caretta caretta) and revealed that the pseudogene proportions of OR gene repertoires in whales were significantly higher than those in their terrestrial relative cattle and also in sea lion and sea turtle. On the other hand, the pseudogene proportion of OR sequences in sea lion was not significantly higher compared with that in their terrestrial relative (dog). It indicates that secondary perfectly adapted marine vertebrates (cetaceans) have lost large amount of their OR genes, whereas secondary-semi-adapted marine vertebrates (sea lions and sea turtles) still have maintained their OR genes, reflecting the importance of terrestrial environment for these animals.     

THE SOUTHERN SEA LION,OTARIA BYRONIA OR OTARIA FLAVESCENS?

Abstract: The status of the specific name of the Southern sea lion is controversial; currently two names are in use: Otaria flavescens (Shaw, 1800) and Otaria byronia (de Blainville, 1820). The former was based on a two-foot-long yellowish otariid collected in the Strait of Magellan and the latter on a skull stated to have been collected on the Tinian Island (Marianas Archipelago); unfortunately both holotypes are lost. Otaria flavescens has date priority over Otaria byronia , but its identification was uncertain. This paper focuses on analyzing the main features of Shaw's holotype (body length, ear size, and hair color), which fit with the features of a Southern sea lion pup. As this was a tangible specimen from a valid locality and has priority over other available epithets, the specific name of the Southern sea lion should be Otaria flavescens (Shaw, 1800).