Odour emissions from anaerobic piggery ponds. 1. Results of a three season, 14-month survey

Odour emission rates were measured for seven different anaerobic ponds treating piggery wastes at six to nine discrete locations across the surface of each pond on each sampling occasion over a 14-month period. Emission rate values varied between ponds, between seasons for the same pond and even for the same pond on different days of a sampling week. Average seasonal emission rates ranged from 7.9 to 46.5OU/m(2)s, while average emission rates ranged from 16.0 to 29.0OU/m(2)s. Factors potentially responsible for the variability in emission rates were investigated, including air and pond liquor temperatures, time of day of sample collection, season and the impact of a prolonged drought.     

Long-term assessment of efficacy of permeable pond covers for odour reduction

Three anaerobic ponds used to store and treat piggery wastes were fully covered with permeable materials manufactured from polypropylene geofabric, polyethylene shade cloth and supported straw. The covers were assessed in terms of efficacy in reducing odour emission rates over a 40-month period. Odour samples were collected from the surface of the covers, the surface of the exposed liquor and from the surface of an uncovered (control) pond at one of the piggeries. Relative to the emission rate of the exposed liquor at each pond, the polypropylene, shade cloth and straw covers reduced average emission rates by 76%, 69% and 66%, respectively. At the piggery with an uncovered control pond, the polypropylene covers reduced average odour emission rates by 50% and 41%, respectively. A plausible hypothesis, consistent with likely mechanisms for the odour reduction and the olfactometric method used to quantifying the efficacy of the covers, is offered.     

Assessment of permeable covers for odour reduction in piggery effluent ponds. 1. Laboratory-scale trials

A variety of materials were trialed as supported permeable covers using a series of laboratory-scale anaerobic digesters. Efficacy of cover performance was assessed in terms of impact on odour and greenhouse gas emission rate, and the characteristics of anaerobic liquor. Data were collected over a 12-month period. Initially the covers reduced the rate of odour emission 40-100 times relative to uncovered digesters. After about three months, this decreased to about a threefold reduction in odour emission rate, which was maintained over the remainder of the trial. The covers did not alter methane emission rates. Carbon dioxide emission rates varied according to cover type. Performance of the covers was attributed to the physical characteristics of the cover materials and changes in liquor composition. The reductions in odour emission indicate that these covers offer a cost-effective method for odour control.     

Comparison of odour emission rates measured from various sources using two sampling devices

Two commonly used sampling devices (a wind tunnel and the US EPA dynamic emission chamber), were used to collect paired samples of odorous air from a number of agricultural odour sources. The odour samples were assessed using triangular, forced-choice dynamic olfactometry. The odour concentration data was combined with the flushing rate data to calculate odour emission rates for both devices on all sources. Odour concentrations were consistently higher in samples collected with a flux chamber (ratio ranging from 10:7 to 5:1, relative to wind tunnel samples), whereas odour emission rates were consistently larger when derived from wind tunnels (ratio ranging from 60:1 to 240:1, relative to flux chamber values). A complex relationship existed between emission rate estimates derived from each device, apparently influenced by the nature of the emitting surface. These results have great significance for users of odour dispersion models, for which an odour emission rate is a key input parameter.     

Odour and ammonia emissions from intensive pig units in Ireland

Odour and ammonia emissions were measured at four intensive pig units in Ireland. Odour samples were collected on-site and analysed for odour concentration using an olfactometer. Ammonia concentrations in the exhaust ventilation air were measured using a portable sensor. The geomean odour emission rates over the four pig units were 17.2, 44.4, 4.3, 9.9 and 16.8 ou(E) s(-1) animal(-1) for dry sows, farrowing sows, first stage weaners, second stage weaners and finishers, respectively. The mean ammonia emission rates, measured at two of the units, were 12.1, 17.1, 1.4, 2.9 and 10.0 g d(-1) animal(-1) for dry sows, farrowing sows, first stage weaners, second stage weaners and finishers, respectively. In general, the odour and ammonia emission rates were comparable to those reported in literature, although some odour emission rate figures were noticeably lower for finishing pigs in this study. The variability in the data highlights the need for individual site assessment.     

Assessment of permeable covers for odour reduction in piggery effluent ponds. 2. Field-scale trials

The efficacy of supported covers was investigated under field conditions using a series of prototypes deployed on an anaerobic pond treating typical piggery waste. Research focused on identifying effective cover support materials and deployment methods, quantifying odour reduction, and estimating the life expectancy of various permeable cover materials. Over a 10-month period, median odour emission rates were five to eight times lower from supported straw cover surfaces and a non-woven, spun fibre polypropylene weed control material than from the adjacent uncovered pond surface. While the straw covers visually appeared to degrade very rapidly, they continued to reduce odour emissions effectively. The polypropylene cover appeared to offer advantages from the perspectives of cost, reduced maintenance and ease of manufacture.     

Effects of dietary crude protein level on odour from pig manure

The objective of this study was to determine the effects of dietary crude protein (CP) level on odour emission, odour intensity, hedonic tone, and ammonia emission from pig manure and on manure composition (pH, total nitrogen, ammonium, volatile fatty acids, indolic, phenolic and sulphur-containing compounds). An experiment was conducted with growing pigs (n = 18) in a randomised complete-block design with three treatments in six blocks. Treatment groups were 12%, 15% and 18% CP diets. Barley was exchanged for soya-bean meal. Crystalline amino acids (AA) were included in the 12% CP diet up to the level of pigs' requirement; the same amount of AA was added to the 15% and 18% CP diets. Pigs with an initial body weight (BW) of 36.5 ± 3.4 kg (mean ± s.d.) were individually penned in partly slatted floor pens and offered a daily feed allowance of 2.8 × maintenance requirement for net energy (NE: 293 kJ/kg BW^0.75). Feed was mixed with water, 1/2.5 (w/w). Faeces and urine of each pig were accumulated together in a separate manure pit under the slatted floor. After an adaptation period of 2 weeks, the manure pits were cleaned and manure was collected. In the 5th week of the collection period, air samples for odour and ammonia analyses, and manure samples were collected directly from each manure pit. Air samples were analysed for odour concentration and for hedonic value and intensity above odour detection threshold. Manure samples were analysed for volatile fatty acids, and indolic, phenolic and sulphurous compounds, ammonium and total nitrogen concentrations. Reducing dietary CP from 18% to 12% lowered odour emission ( P < 0.05) and ammonia emission ( P = 0.01) from pig manure by 80% and 53%, respectively. Reduced dietary CP decreased total nitrogen, methyl sulphide, carbon disulphide, ethanethiol, phenol, 4-ethyl phenol, indole and 3-methyl indole concentrations in the manure ( P < 0.05). Volatile fatty acids and cresols concentrations in the manure of pigs fed different dietary CP levels were similar. A reduction of dietary CP and at the same time providing essential AA is an option to reduce odour emission as well as ammonia emission from pig manure.     

The influence of diet crude protein level on odour and ammonia emissions from finishing pig houses

Feed trials were carried out to assess the influence of crude protein content in finishing pig diets on odour and ammonia emissions. Eight pigs (4 boars and 4 gilts), average initial weight 70.8 kg (s.e. 3.167) were housed in two pens that were isolated from the rest of a pig house at University College Dublin Research Farm, Newcastle, Dublin, Ireland. Four diets containing 130, 160, 190 and 220 g x kg(-1) crude protein were fed during six four-week feeding periods (one treatment per room). The first week of the feeding periods served to allow odour build up in the pens and as a dietary adjustment period. The pens had partially slatted floors that were cleaned and had all the manure removed after each four-week period. Odour and ammonia concentrations were measured on days 9, 14, 16, 21 and 23 of each trial period. Odour samples were collected in Nalophan bags and analysed for odour concentration using an ECOMA Yes/No olfactometer. The odour threshold concentration was calculated according to the response of the olfactometry panel members and was displayed in Ou(E)m(-3), which referred to the physiological response from the panel equivalent to that elicited by 40 ppbv(-1) n-butanol evaporated in 1 m(3) of neutral gas. Ammonia concentrations in the ventilation air were measured using Dr?ger tubes. The odour emission rates per animal for the 130, 160, 190 and 220 g x kg(-1) crude protein diets were 12.1, 13.2, 19.6 and 17.6 Ou(E)s(-1)animal(-1), respectively (P<0.01). The odour emission rate per livestock unit (500 kg) for the 130, 160, 190 and 220 g x kg(-1) crude protein diets were 77.6, 80.0, 115.8 and 102.9 Ou(E)s(-1)LU(-1), respectively (P<0.01). The ammonia emission rates per animal for the 130, 160, 190 and 220 g x kg(-1) crude protein diets were 3.11, 3.89, 5.89 and 8.27 g x d(-1)animal(-1), respectively (P0.05). Manipulation of dietary crude protein levels would appear to offer a low cost alternative, in relation to end-of-pipe treatments, for the abatement of odour and ammonia emissions from finishing pig houses.     

Free—living fathead minnows rapidly learn to recognize pike as predators

Individuals from a natural population of approximately 20 000 fathead minnows from a pike–free pond did not respond with appropriate anti–predator behaviour upon encountering pike odour in laboratory tests. However, 14 days after 10 pike were stocked into the pond, minnows had acquired recognition of pike odour. Laboratory studies have indicated several possible mechanisms for acquiring predator recognition in fathead minnows. This study indicates that these, or similar processes, can produce major changes in predator recognition in the wild.     

Colonization,variability, and the use of substratum-filled trays for biomonitoring benthic communities

Sampling variability and colonization rate of introduced substrates (plastic trays filled with pebble and cobble) in two southwestern Virginia streams are described. Substrates were rapidly colonized by aquatic macroinvertebrates, but colonization rates differed between years, possibly due to annual variability in macroinvertebrate abundance. To examine the applicability of using these substrates for biomonitoring benthic communities, trays were placed at several locations in a river receiving power plant discharges. Only six samples were necessary to detect a 15%reduction in macroinvertebrate density and a 12% reduction in number of taxa at effluent sites. Benthic communities established on rock-filled trays and multiplate samplers collected from the same stations during the same period were compared. Although multiplate samplers were more variable than rock trays and were selective for different taxa, both substrate types showed significant differences in community parameters among locations. Rock trays at all sites were dominated by Cheumatopsyche sp., whereas chironomids were more abundant on multiplate samplers. The relative abundance of mayflies was reduced at the effluent site on both substrate types.     

Odour and ammonia emissions from intensive poultry units in Ireland

Odour and ammonia emissions were measured from three broiler, two layer and two turkey houses in Ireland. The broiler units gave a large range of odour and ammonia emission rates depending on the age of the birds and the season. A considerable variation between the odour and ammonia emission rates was evident for the two layer units which may have been due to the different manure handling systems utilised in the houses. There was relatively little difference in the odour and ammonia emissions from the two turkey houses. As a precautionary principle, odour emission rates utilised in atmospheric dispersion models should use the maximum values for broilers and turkeys (1.22 and 10.5 ou(E) s(-1) bird(-1) respectively) and the mean value for the layers depending on the manure handling system used (0.47 or 1.35 ou(E) s(-1) bird(-1)).     

POLYPHENISM IN SPADEFOOT TOAD TADPOLES AS A LOCALLY ADJUSTED EVOLUTIONARILY STABLE STRATEGY

I examined the evolutionary factors maintaining two environmentally induced morphs in ponds of variable duration. Larvae of New Mexico spadefoot toads (Scaphiopus multiplicatus) often occur in the same pond as a large, rapidly developing carnivorous morph and as a smaller, more slowly developing omnivorous morph. Previous studies revealed that carnivores can be induced by feeding tadpoles live fairy shrimp and that morph determination is reversible. Field and laboratory experiments indicated that the ability of an individual to become a carnivore or an omnivore is maintained evolutionarily as a response to variability in pond longevity and food abundance. Carnivores survived better in highly ephemeral artificial ponds, because they developed faster. Omnivores survived better in longer-duration artificial ponds, because their larger fat reserves enhanced postmetamorphic survival. The two morphs also occupy different trophic niches. Experimental manipulations of morph frequency in ponds of intermediate duration revealed that increased competition for food among individuals of the more common morph made the rarer form more successful. Morph frequency within each pond was stabilized at an equilibrium by frequency-dependent morph reversal, which reflected frequency-dependent natural selection on size at metamorphosis: larger metamorphs had higher survival, and individuals reared at a frequency above the pond's equilibrium frequency were smaller at metamorphosis than were individuals of that morph reared at a frequency below the pond's equilibrium. Because neighboring ponds often differed in pond longevity and food abundance, each pond possessed a unique equilibrium morph frequency. This implies that morph determination in Scaphiopus is a locally adjusted evolutionarily stable strategy (ESS).     

The effect of cereal type and enzyme addition on pig performance, intestinal microflora, and ammonia and odour emissions

Two 2 × 2 factorial experiments were conducted to investigate the interaction between cereal type (wheat v. barley) and exogenous enzyme supplementation (with or without) on odour and ammonia emissions (experiment 1) and growth performance (experiment 2) in grower-finisher pigs. The enzyme supplement used contained endo-1, 3 (4) - β- glucanase (EC 3.2.1.6) and endo-1, 4 - β-xylanase (E.C 3.2.1.8). The diets were formulated to contain similar levels of net energy (9.8 MJ/kg) and lysine (10.0 g/kg). The experimental treatments were as follows: (1) wheat-based diet, (2) wheat-based diet containing a β-glucanase and β-xylanase mixed enzyme supplement, (3) barley-based diet and (4) barley-based diet containing a β-glucanase and β-xylanase mixed enzyme supplement. In experiment 1, the diets were offered to the pigs for 23 days in sealed pens (eight pigs per pen) and this was repeated four times (n = 4). Odour and ammonia emissions were measured on days 9, 11, 14, 16, 21 and 23 of each replicate period. Odour samples were collected in 20-l Nalophan bags and analysed for odour concentration using an ECOMA Yes/No Olfactometer. Ammonia concentrations in the ventilation air were measured using Dräger tubes. In experiment 2, 220 pigs were group fed in mixed sex pens using single-space feeders (11 pigs per feeder, six boars and five gilts) (n = 5). There was a cereal × enzyme interaction in odour emission rates, ammonia emissions and selected microbial populations in the caecum and colon (P < 0.05). The addition of an enzyme supplement to the barley-based diet increased both odour and ammonia emission, however the addition of an enzyme to the wheat-based diet decreased ammonia emission rates and had no effect on odour emission. Pigs offered the unsupplemented barley-based diet had a significantly (P < 0.05) lower population of Enterobacteriaceae spp. and a higher population of Bifidobacteria spp. compared with enzyme-supplemented barley diets. However, there was no effect of enzyme supplementation in wheat-based diets. In the performance experiment, neither cereal type nor enzyme inclusion had an effect on pig performance or carcass characteristics. In conclusion, the inclusion of an enzyme mix to barley-based diets increased odour and ammonia emissions, while the addition of an enzyme mix to wheat-based diets decreased ammonia emissions.     

Fish species richness in spring‐fed ponds: effects of habitat size versus isolation in temporally variable environments

1. Species richness in a habitat patch is determined by immigration (regional) and extinction (local) processes, and understanding their relative importance is crucial for conservation of biodiversity. In this study, we applied the Island Biogeography concept to spring ponds connected to a river in southwestern Japan to examine how immigration and extinction processes interact to determine fish species richness in temporally variable environments. 2. Fish censuses were conducted 15 times in 13 study ponds at 1–4 month intervals from August 1998 through October 2000. Effects of habitat size (pond area), isolation (distance from the river) and temporal environmental variability (water level fluctuation) on (i) species richness, (ii) immigration and extinction rates and (iii) population size and persistence of each fish species were assessed. 3. The results revealed predominant effects of distance on species richness, immigration/extinction rates and population size and persistence. Species richness decreased with increasing distance but was not related to either pond area or water level fluctuation. A negative effect of distance on immigration rate was detected, while neither pond area nor water level fluctuation had significant effects on extinction rate. Further, population size and persistence of four species increased with decreasing distance, suggesting that, in ponds close to the river, immigrants from the river reduce the probability of extinction (i.e. provide a rescue effect), contributing to the maintenance of high species richness. 4. Overall results emphasise the importance of immigration processes, rather than extinction, in shaping patterns of species richness in our system. The predominant importance of immigration was probably because of (i) high temporal variability that negates habitat‐size effects and (ii) continuous immigration that easily compensates for local extinctions. Our results suggest that consideration of regional factors (e.g. connectivity, locations of source populations and barriers to colonisation) is crucial for conservation and restoration of local habitats.     

Oligochaete respiration as a measure of sediment toxicity in Puget Sound,Washington

Respiration rate measurements were conducted with the marine oligochaete Monopylephorus cuticulatus Baker and Brinkhurst to determine the sublethal toxicity of sediments collected from Puget Sound, Washington. Worms were exposed to elutriates prepared from centrifuged sediment slurries. Standard respiration rates were measured at high dissolved oxygen levels for each sample tested and were compared with control and other test results. A total of 97 sediment samples were tested; 40 samples demonstrated significant respiration effects (elevation or depression). Comparison with results of other tests conducted at the same stations or geographic locations (genotoxicity to fish cells, lethality to sensitive species, reproductive impairment tests) indicated very good agreement on broad scale toxicity patterns at different geographical areas, and that respiration measurements effectively determined sublethal toxicity of sediments. This study represents the first application of respiration measurements as a sublethal toxicity test for field-collected sediments.     

Spatial and Temporal Variability in Growing-Season Net Ecosystem Carbon Dioxide Exchange at a Large Peatland in Ontario,Canada

We measured net ecosystem exchange of carbon dioxide (CO2) (NEE) during wet and dry summers (2000 and 2001) across a range of plant communities at Mer Bleue, a large peatland near Ottawa, southern Ontario, Canada. Wetland types included ombrotrophic bog hummocks and hollows, mineral-poor fen, and beaver pond margins. NEE was significantly different among the sites in both years, but rates of gross photosynthesis did not vary spatially even though species composition at the sites was variable. Soil respiration rates were very different across sites and dominated interannual variability in summer NEE within sites. During the dry summer of 2001, net CO2 uptake was significantly smaller, and most locations switched from a net sink to a source of CO2 under a range of levels of photosynthetically active radiation (PAR). The wetter areas--poor fen and beaver pond margin--had the largest rates of CO2 uptake and smallest rates of respiratory loss during the dry summer. Communities dominated by ericaceous shrubs (bog sites) maintained similar rates of gross photosynthesis between years; by contrast, the sedge-dominated areas (fen sites) showed signs of early senescence under drought conditions. Water table position was the strongest control on respiration in the drier summer, whereas surface peat temperature explained most of the variability in the wetter summer. Q 10 temperature-respiration quotients averaged 1.6 to 2.2. The ratio between maximum photosynthesis and respiration ranged from 3.7:1 in the poor fen to 1.2:1 at some bog sites; it declined at all sites in the drier summer owing to greater respiration rates relative to photosynthesis in evergreen shrub sites and a change in both processes in sedge sites. Our ability to predict ecosystem responses to changing climate depends on a more complete understanding of the factors that control NEE across a range of peatland plant communities.     

Growth and development of larval northern cricket frogs (Acris crepitans) in relation to phytoplankton abundance

SUMMARY. 1. Tadpoles of Acris crepitans were collected from two ponds in central Illinois, Depth, water temperature, distance from shore and water samples were taken at each sample site. The potential for food limitation and non-random habitat selection were examined.
2. Algal densities from water samples averaged over 1.0× 10⁶ cells ml⁻¹ in Scott's pond hut only 4.6×10³ cells ml⁻¹ in Vic's pond.
3. Guts of tadpoles from Scott's pond contained more algal cells than did guts of tadpoles from Vic's pond. Tadpoles from Scott's pond were consistently larger and more advanced in development than tadpoles collected from Vic's pond at the same lime. Therefore, tadpoles of Scott's pond were able to utilize the higher algal densities whereas tadpoles of Vic's pond may be food-limited, causing reduced growth and development.
4. Canonical discriminant analysis was used to test whether sites with different numbers of tadpoles could be distinguished based on environmental variables. Canonical function I was primarily a measure of water depth at a sample site. This function was significant in Scott's pond only. Sites containing one or more tadpoles were not easily distinguished from each other, but were found in consistently shallower water than sites where no tadpoles were found.     

Temporal variability in the diversity and composition of stream bacterioplankton communities

Bacterioplankton in freshwater streams play a critical role in stream nutrient cycling. Despite their ecological importance, the temporal variability in the structure of stream bacterioplankton communities remains understudied. We investigated the composition and temporal variability of stream bacterial communities and the influence of physicochemical parameters on these communities. We used barcoded pyrosequencing to survey bacterial communities in 107 streamwater samples collected from four locations in the Colorado Rocky Mountains from September 2008 to November 2009. The four sampled locations harboured distinct communities yet, at each sampling location, there was pronounced temporal variability in both community composition and alpha diversity levels. These temporal shifts in bacterioplankton community structure were not seasonal; rather, their diversity and composition appeared to be driven by intermittent changes in various streamwater biogeochemical conditions. Bacterial communities varied independently of time, as indicated by the observation that communities in samples collected close together in time were no more similar than those collected months apart. The temporal turnover in community composition was higher than observed in most previously studied microbial, plant or animal communities, highlighting the importance of stochastic processes and disturbance events in structuring these communities over time. Detailed temporal sampling is important if the objective is to monitor microbial community dynamics in pulsed ecosystems like streams.     

Power analysis for real-time PCR quantification of genes in activated sludge and analysis of the variability introduced by DNA extraction

The aims of this study were to determine the power of discrimination of the real-time PCR assay for monitoring fluctuations in microbial populations within activated sludge and to identify sample processing points where methodological changes are needed to minimize the variability in target quantification. DNA was extracted using a commercially available kit from mixed liquor samples taken from the aeration tank of four bench-scale activated-sludge reactors operating at 2-, 5-, 10-, and 20-day solid retention times, with mixed-liquor volatile suspended solid (MLVSS) values ranging from 260 to 2,610 mg/liter. Real-time PCR assays for bacterial and Nitrospira 16S rRNA genes were chosen because they represent, respectively, a highly abundant and a less-abundant bacterial target subject to clustering within the activated sludge matrix. The mean coefficient of variation in DNA yields (measured as microgram of DNA per milligram of MLVSS) in triplicate extractions of 12 different samples was 12.2%. Based on power analyses, the variability associated with DNA extraction had a small impact on the overall variability of the real-time PCR assay. Instead, a larger variability was associated with the PCR assay. The less-abundant target (Nitrospira 16S rRNA gene) had more variability than the highly abundant target (bacterial 16S rRNA gene), and samples from the lower-biomass reactors had more variability than samples from the higher-biomass reactors. Power analysis of real-time PCR assays indicated that three to five samples were necessary to detect a twofold increase in bacterial 16S rRNA genes, whereas three to five samples were required to detect a fivefold increase in Nitrospira 16S rRNA genes.     

Determining replication for discrimination among microbial communities in environmental samples using community-level physiological profiles

A statistical approach was employed to assess microbial community variability within a single 4-l water sample and among 10 independent 4-l water samples from a single location using community-level physiological profiles. Power calculations demonstrated that duplicate analyses could distinguish between two different locations at two times during the year. Variability associated with replicates from a single container or from different containers was nearly the same for the two sites examined. Duplicate assays (one from each of two independent samples) were sufficient to resolve the between-site differences at alpha=0.05 with power exceeding 0.95 at both times of the year. Similar methods are recommended to determine the appropriate number of replicates for environments of interest.