Food availability affects growth in a coral reef fish

Summary Pomacentrus amboinensis is common on small patch reefs within One Tree Lagoon (Great Barrier Reef), where it preferentially settles onto deep reefs. A preliminary experiment, in which juveniles were transplanted to identical reef structures at two sites, within two depth strata, indicated that juvenile growth and survivorship were better in deeper water. The hypothesis that this difference was due to food availability was tested by a supplemental feeding experiment, carried out at another two randomly chosen sites, within the same two depth strata. Fish were fed each day over a one month period, during which no mortality was observed. The growth rates of juveniles were markedly higher on all food-supplemented reefs, when compared to controls. Growth differed between depth strata, but there was no interaction between the food x depth factors, which would have suggested a greater effect of food supplementation in either habitat. Thus, although the difference between depths cannot be attributed to food availability, the results have a more general significance. Food appears to be a limiting resource (in terms of growth) in both the marginal shallow habitat, and the more suitable deeper habitat.     

An analysis of fish community responses to coral mining in the Maldives

Synopsis Coral mining takes place on shallow reef flats at a number of localities in the Maldives, but not on the adjacent deeper reef slopes. A semi-quantitative census method for fish species abundance and biomass is described. Fish community structure is compared on mined and non-mined reef flats and their adjacent slopes using a variety of univariate, graphical/distributional and multivariate statistical techniques. In general, univariate and graphical distributional methods do not indicate significant differences between mined and non-mined localities with respect to the relative abundances and biomasses of species. Multivariate methods (both classification and ordination), however, indicate very clear-cut effects of mining on the reef flats, and also significant effects on reef slopes adjacent to mined flats. The effect was equally clear using non-quantitative (presence/absence) data. The fish species mainly responsible for the differences between mined and non-mined localities are identified, and the differences are explained in terms of the feeding biology of these species.     

Nutrient manipulation methods for coral reef studies: A critical review and experimental field data

The results reported in this paper demonstrate suboptimal experimental designs in some of the previously published manipulative methods and provide insights for the improvement of in-situ nutrient studies on coral reefs. Overgrown 0.5-liter porous clay-pot diffusers (“mini-reefs”—following a decade of recruitment, colonization and competition) were utilized to evaluate protocols for studies of controlled nutrient enrichment on coral reefs. A commonly used fertilizer, Tree Food Stakes resulted in detrimental 11-fold and 20-fold decreases of fleshy algae and calcareous coralline algae, respectively, relative to the Control treatments; while blue-green algae (Cyanobacteria) became significantly (6 times) more abundant. Osmocote-filled mini-reefs showed no such negative differences in mortality from the Controls for any functional group. By avoiding the pitfalls of inappropriate sources of enrichment, insufficient durations of colonization/competition studies, suboptimal study areas and inadequate nutrient detection limits in future research, the potential to provide new insights into the nutrient status of coral reefs is greatly increased.     

Harmful algae on tropical coral reefs: Bottom-up eutrophication and top-down herbivory

A conceptual paradigm, the “Relative Dominance Model”, provides the perspective to assess the interactive external forcing-mechanisms controlling phase shifts among the dominant benthic functional groups on tropical coral reefs [i.e., microalgal turfs and frondose macroalgae (often harmful) versus reef-building corals and calcareous coralline algae (mostly beneficial due to accretion of calcareous reef framework)]. Manipulative experiments, analyses of existing communities and bioassays tested hypotheses that the relative dominances of these functional groups are mediated by two principal controlling factors: nutrients (i.e., bottom-up control) and herbivory (i.e., top-down control). The results show that reduced nutrients alone do not preclude fleshy algal growth when herbivory is low, and high herbivory alone does not prevent fleshy algal growth when nutrients are elevated. However, reduced nutrients in combination with high herbivory virtually eliminate all forms of fleshy micro- and macro-algae. The findings reveal considerable complexity in that increases in bottom-up nutrient controls and their interactions stimulate harmful fleshy algal blooms (that can alter the abundance patterns among functional groups, even under intense herbivory); conversely, elevated nutrients inhibit the growth of ecologically beneficial reef-building corals. The results show even further complexity in that nutrients also act directly as either limiting factors (e.g., physiological stresses) or as stimulatory mechanisms (e.g., growth enhancing factors), as well as functioning indirectly by influencing competitive outcomes. Herbivory directly reduces fleshy-algal biomass, which indirectly (via competitive release) favors the expansion of grazer-resistant reef-building corals and coralline algae. Because of the sensitive nature of direct/indirect and stimulating/limiting interacting factors, coral reefs are particularly vulnerable to anthropogenic reversal effects that decrease top-down controls and, concomitantly, increase bottom-up controls, dramatically altering ecosystem resiliencies.     

A light trap design for stratum-specific sampling of reef fish larvae

The vertical distribution of late stage reef fish larvae may potentially influence their dispersal, recruitment success and energetic expenditure during the recruitment process. To date, methods of examining the vertical distribution of reef fish larvae either under-sample late stage individuals, or are incapable of discretely sampling the water column. The aim of this study was to develop a light trap able to sample a narrow depth range enabling fine scale patterns of vertical distribution to be examined. The experimental traps radiated light in a relatively narrow beam with a maximum vertical angle of radiation of 7.5°, indicating that the traps could be placed 4.8 m apart and still sample discrete depth strata. Their catch efficiency was similar to conventional light traps, indicating that they are adequate sampling units. Preliminary data showed that most families are more abundant near the surface, although many have significant numbers of individuals lower in the water column. Some families (inc. Apogonidae) occurred in higher abundance at greater depths. Our experimental light traps permit increased resolution of the vertical distribution of late stage larval reef fishes in the field.     

Parasites of recruiting coral reef fish larvae in New Caledonia

Recruiting coral reef fish larvae from 38 species and 19 families from New Caledonia were examined for parasites. We found 13 parasite species (Platyhelminthes: Monogenea, Cestoda and Trematoda) but no acanthocephalan, crustacean or nematode parasites. Over 23% of individual fish were infected. Didymozoid metacercariae were the most abundant parasites. We conclude that most of the parasites are pelagic species that become ‘lost’ once the fish larvae have recruited to the reef. Larval coral reef fish probably contribute little to the dispersal of the parasites of the adult fish so that parasite dispersal is more difficult than that of the fish themselves.     

Responses of algal communities to gradients in herbivore biomass and water quality in Marovo Lagoon, Solomon Islands

Settlement tiles were used to characterise and quantify coral reef associated algal communities along water quality and herbivory gradients from terrestrial influenced near shore sites to oceanic passage sites in Marovo Lagoon, the Solomon Islands. After 6 months, settlement tile communities from inshore reefs were dominated by high biomass algal turfs (filamentous algae and cyanobacteria) whereas tiles located on offshore reefs were characterised by a mixed low biomass community of calcareous crustose algae, fleshy crustose algae and bare tile. The exclusion of macrograzers, via caging of tiles, on the outer reef sites resulted in the development of an algal turf community similar to that observed on inshore reefs. Caging on the inshore reef tiles had a limited impact on community composition or biomass. Water quality and herbivorous fish biomass were quantified at each site to elucidate factors that might influence algal community structure across the lagoon. Herbivore biomass was the dominant driver of algal community structure. Algal biomass on the other hand was controlled by both herbivory and water quality (particularly dissolved nutrients). This study demonstrates that algal communities on settlement tiles are an indicator capable of integrating the impacts of water quality and herbivory over a small spatial scale (kilometres) and short temporal scale (months), where other environmental drivers (current, light, regional variability) are constant.     

Best practices for improved governance of coral reef marine protected areas

Coral reef marine protected areas (MPA) are widely distributed around the globe for social and ecological reasons. Relatively few of these MPAs are well managed. This review examines the governance of coral reef MPAs and the means to improve coral reef MPA management. It highlights common governance challenges, such as confused goals, conflict, and unrealistic attempts to scale up beyond institutional capacity. Recommendations, based on field experience and empirical evidence from around the world, are made for best practices at various stages of MPA implementation.

Spatial variation in sea urchins, fish predators, and bioerosion rates on coral reefs of Belize

Although sea urchins are critical for controlling macroalgae on heavily fished coral reefs, high densities threaten reefs, as urchins are also prodigous bioeroders. This study examined urchin population characteristics, bioerosion rates, their fish predators (Labridae), and potential competitors (Scaridae) on unprotected reefs and a reef within a marine protected area (MPA) in the lagoonal regions off Belize. Urchin density (<1 m⁻²) and bioerosion rates (∼0.2 kg CaCO₃ m⁻² year⁻¹) were lowest and members of the Labridae were the highest (∼20 fish 200 m⁻³) within the MPA, while several unprotected reefs had higher (∼18–40 m⁻²) urchin densities, lower Labridae abundances (1–3 fish 200 m⁻³), and bioerosion rates ranging from ∼0.3–2.6 kg CaCO₃ m⁻² year⁻¹. Urchin abundances were inversely related to Labridae (wrasses and hogfish) densities; however, on reef ridges, low algal cover (∼15%), small urchin size (∼14 mm), and low proportion of organic material in urchin guts suggested food limitation. Both top–down (predation) and bottom–up factors (food limitation) likely contribute to the control of urchins, predominantly Echinometra viridis, off Belize, thereby potentially diminishing the negative impacts of bioerosion activities by urchins.     

The behavioral ecology of three Indian Ocean surgeonfishes (Acanthurus lineatus,A. leucosternon and Zebrasoma scopas): their feeding strategies,and social and mating systems

Synopsis The relationship between the morphology, feeding strategies and social and mating systems of three surgeonfishes was investigated. Adults of each defend feeding territories, intra-and interspecifically. The largest species, because of its morphological limitation, relies on food that has to be defended against many other species. It forms large colonies in which fishes singly defend small territories containing high standing crop algal mats. Colony formation is a mechanism by which the efficiency and effectiveness of interspecific territory defense is increased. The smallest species, because of its morphological adaptations, is able to rely most on food that other species cannot efficiently exploit. It forms pairs that defend large territories containing a thin algal mat. It is restricted to the poorest quality habitat by the aggressive activities of more dominant species. The third species, which also forms pairs, has an intermediate feeding strategy. The local coexistence of these three and other surgeonfishes results from a combination of (i) their partitioning both habitat and food resources, and (ii) the populations of two of the most dominant species apparently being below the carrying capacity. Territoriality and the absence of parental care facilitates pair formation in surgeonfishes. Permanently territorial species usually form pairs. The colonial species does not form pairs because the colonial habit facilitates interference of males in each other's spawnings.     

Nutritional value of detritus and algae in blenny territories on the Great Barrier Reef

The salariin blenny, Salarias patzneri, primarily ingests detrital aggregates and inorganic sediment, with small quantities of filamentous algae. Samples of particulate matter <125 μm and filamentous algae were collected from the territories of S. patzneri and the nutritional value of these resources assessed using organic content and protein/energy ratios calculated from protein, carbohydrate and lipid content. Samples were collected throughout the day, during both summer and winter, to enable temporal comparisons of nutritional value. The particulates <125 μm, which were predominantly amorphic detritus, accounted for 41±2% and 44±3% of the organic matter in the epilithic algal matrix (EAM) during the summer and winter, respectively, whilst filamentous algae accounted for 37±3% and 41±3% of the organic matter in the summer and winter, respectively. Carbohydrate and lipid concentration in the algal samples was significantly greater than in particulate matter <125 μm, although no significant difference was detected in protein levels of algal samples and particulates <125 μm. Consequently, the protein/energy ratio of particulates <125 μm in the summer (11±1 mg kJ⁻¹) and winter (10±1 mg kJ⁻¹) was similar to that of filamentous algae in the summer (9±1 mg kJ⁻¹) and winter (8±1 mg kJ⁻¹). These results suggest detrital aggregates are at least comparable to filamentous algae as a nutritional resource. The large contribution of high quality detritus to organic matter in the epilithic algal matrix collected from S. patzneri territories throughout the day and between seasons provides strong evidence that detritus is a valuable component of small territorial fish diets and is an integral part of coral reef food webs.     

Ontogenetic change in the abundance of mycosporine-like amino acids in non-zooxanthellate coral larvae

Although mycosporine-like amino acids (MAAs) have been extensively investigated in reef-building corals, the sources of these MAAs and the process of their interconversion remain a topic of interest. Here we examined ontogenetic change in the abundance of MAAs in planula larvae of the spawning scleractinian coral Goniastrea retiformis in the absence of zooxanthellae and other dietary input. In order to examine the potential contribution of prokaryotes in the synthesis of MAAs in animal tissue, one group of larvae were treated with the antibiotic rifampicin. High concentrations of MAAs (mycosporine-glycine, shinorine, palythinol, asterina-330), were present in the asymbiotic eggs and adults; however, no MAAs were present in the endosymbiotic zooxanthellae. We documented a steady decline in the total MAA concentrations through time in larvae treated with rifampicin; however, in the absence of antibiotic there was a significant increase in the concentration of MAAs, driven by a sharp increase in the abundance of shinorine and palythinol between day 3 and 7. Our results suggest that MAA synthesis and conversion in G. retiformis larvae occurred in the absence of symbiotic zooxanthellae, and indicate a possible contribution of prokaryotes associated with the animal tissue to these processes.     

Field and simulation analyses of visual methods for sampling coral cover

The consensus view that coral reefs are declining urges the need to test the short-term effects of conservation. Visual sampling methods are a low cost, technically simple, and potentially highly accurate means of monitoring reef status or calibrating larger scale aerial and satellite surveys. We studied the recent literature and found that of the three most commonly used visual methods, the belt transect (BT) method was used twice as much as the line transect (LT) method and 2.5 times as often as the linear point intercept (LPI) method. We tested the repeatability, cost-efficiency, precision, and accuracy of these three methods in the field and in computer simulations. In the field, the observer repeatability was uniformly high among the three methods (R>0.9). Surprisingly, our study indicates that the least used method (LPI) was the most cost-effective means of measuring coral cover while being at least as precise and accurate as the other two methods. Our simulation study indicated that both the accuracy and precision of the three methods decrease sharply with decreasing coral cover, and that using between 5 and 10 transects over a homogeneous area is an appropriate sample size at either low or high coral cover.     

Recovery without resilience: persistent disturbance and long-term shifts in the structure of fish and coral communities at Tiahura Reef, Moorea

Disturbances have a critical effect on the structure of natural communities. In this study long-term changes were examined in the reef community at Tiahura Reef, on the northern coast of Moorea, which had been subject to many and varied disturbances over the last 25 years. Tiahura Reef was subject to an outbreak of crown-of-thorns starfish (Acanthaster planci) in 1980–1981, causing significant declines in the abundance of scleractinian corals and butterflyfishes. By 2003, the abundance of corals and butterflyfishes had returned to former levels, but despite this apparent recovery, the species composition of coral communities and butterflyfish assemblages was very different from those recorded in 1979. Ongoing disturbances (including further outbreaks of crown-of-thorns starfish, cyclones, and coral bleaching events) appear to have prevented recovery of many important coral species (notably, Acropora spp.), which has had subsequent effects on the community structure of coral-feeding butterflyfishes. This study shows that recurrent disturbances may have persistent effects on the structure and dynamics of natural communities.     

Cushion star (Culcita schmideliana) preys on coral polyps in Gulf of Mannar,Southeast India

Corallivore animals play vital role in coral reef ecology. Predation on corals by other organisms has not been studied properly in the Indian waters. This study reports the first observation of predation by cushion star (Culcita schmideliana) on coral polyps in Gulf of Mannar (GoM), southeast India. During our regular underwater surveys in GoM, C. schmideliana was found preying on hard coral Acropora formosa and soft coral Sarcophyton sp. at a depth of 3 m in Vilanguchalli patch reef. Though C. schmideliana has been sighted often under water, it has not been observed to predate on corals in GoM before. The area where predation was observed has a major population of hard corals (50.21%) besides seagrasses (8.36%) and soft corals (6.11%). Temperature anomalies and the consequent coral bleaching could be the factors making C. schmideliana prefer coral polyps.     

Effects of microhabitat characteristics on the settlement and recruitment of a coral reef fish at two spatial scales

Populations of fishes on coral reefs are replenished by the settlement of pelagic larvae to demersal populations. Recruitment varies spatially and temporally and can exert strong effects on the dynamics of reef fish populations. This study examined the effect of microhabitat characteristics on small-scale and large-scale recruitment variation in the three-spot damselfish, Stegastes planifrons (Cuvier). Comparison of 0.25-m² quadrats occupied by three-spots with randomly sampled null quadrats showed that three-spots quadrats contained a higher percent cover of the coral Montastrea annularis than would be expected at random. Manipulative experiments on three types of 1.0-m² patch reefs (living M. annularis, dead Porites Porites and dead Acropora palmata) patch reefs on showed that this non-random distribution was established by microhabitat choice during settlement and not by differential post-settlement survival. The presence of conspecific juveniles did not affect settlement. Recruitment was monitored at nine sites on three islands over 3 years. Recruitment showed no consistent pattern in the relative levels of recruitment among sites. Similarly, no consistent relationship emerged between recruitment levels and microhabitat characteristics at the nine sites. For example, at this large scale, the percent cover of M. annularis explained variation in recruitment in only 1 out of 3 years. These results suggest that small-scale recruitment patterns are influenced by microhabitat choice during settlement, but that these habitat effects do not scale up to influence large-scale variation in recruitment.     

Effects of monsoon-driven wave action on coral reefs of Guam and implications for coral recruitment

Benthic cyanobacteria can respond rapidly to favorable environmental conditions, overgrow a variety of reef organisms, and dominate benthic marine communities; however, little is known about the dynamics and consequences of such cyanobacterial blooms in coral reef ecosystems. In this study, the benthic community was quantified at the time of coral spawnings in Guam to assess the substrate that coral larvae would encounter when attempting settlement. Transects at 9, 18, and 25-m depths were surveyed at two reef sites before and after heavy wave action driven by westerly monsoon winds. Communities differed significantly between sites and depths, but major changes in benthic community structure were associated with wave action driven by monsoon winds. A shift from cyanobacteria to crustose coralline algae (CCA) accounted for 44% of this change. Coral recruitment on Guam may be limited by substrate availability if cyanobacteria cover large areas of the reef at the time of settlement, and consequently recruitment may in part depend upon wave action from annual monsoon winds and tropical storms which remove cyanobacteria, thereby exposing underlying CCA and other substrate suitable for coral settlement.     

The dinoflagellates Pfiesteria shumwayae and Luciella masanensis cause fish kills in recirculation fish farms in Denmark

Fish kills in two geographically separate fish farms in northern Denmark in 2012, one using marine, the other brackish water ‘Recirculation Aquaculture Systems’ (RAS), were found to be caused by Pfiesteria shumwayae and Luciella masanensis, two species of dinoflagellates belonging to the family Pfiesteriaceae. There were no other harmful algae present in either of the aquaculture plants. Serious fish kills in the US have been attributed to Pfiesteria during the past 20 years, but this type of mortality has not been documented elsewhere. L. masanensis, described recently from Korea and USA, has not been previously reported to be the source of fish kills. In the marine farm, the affected fish was rainbow trout, in the brackish water farm pikeperch. Light microscopy is presently insufficient to discriminate between the approx. 20 species of the family Pfiesteriaceae described. Identification of the two algal species was therefore based on molecular sequencing of nuclear-encoded LSU rDNA, confirmed by scanning electron microscopy and, eventually, also by examination of the very thin amphiesmal plates of the flagellates by calcofluor-stained cells in a fluorescence microscope.Although the two fish farms differed in light and salinity conditions, both farms used re-circulating water in closed circuit systems. The dinoflagellates were examined in detail and shown to feed on organic material such as live, damaged nematodes, as described for the single pfiesteriacean flagellate known from freshwater, Tyrannodinium edax. Algal cells were observed to attach to their prey by an attachment filament and subsequently used a peduncle to suck up the food. Fish farms utilizing water recirculation technology are gaining popularity due to their reduced effect on the environment. The two cases from Denmark are apparently the first RAS farms in which serious fish kills have been reported. In the marine farm (Luciella) fish mortality increased dramatically despite treatment of the water with peracetic acid and chloramine-T. The plant was temporarily closed down pending investigation into the cause of mortality and subsequently to determine a method of management to control the dinoflagellate and avoid future fish kills. In the brackish water farm (Pfiesteria), water was treated with chloramine-T, which caused the dinoflagellates to disappear temporarily from the water column, apparently forming temporary cysts. The treatment was repeated after a few days to a week, when the temporary cysts appeared to germinate and the dinoflagellates reappeared in the water column.