A recombinase-mediated system for elimination of antibiotic resistance gene markers from genetically engineered Bacillus thuringiensis strains.

A TnpI-mediated site-specific recombination system to construct genetically modified Bacillus thuringiensis strains was developed. Recombinant B. thuringiensis strains from which antibiotic resistance genes can be selectively eliminated were obtained in vivo with a new vector based on the specific resolution site of transposon Tn4430. For example, a cryIC gene, whose product is active against Spodoptera littoralis, was introduced into B. thuringiensis Kto harboring a cryIA(c) gene active against Ostrinia nubilalis. The resulting strain had a broader activity spectrum than that of the parental strain. It contained only B. thuringiensis DNA and was free of antibiotic resistance genes. This should facilitate regulatory approval for its development as a commercial biopesticide.     

Isolation of methyl parathion-degrading strain M6 and cloning of the methyl parathion hydrolase gene

A degradative bacterium, M6, was isolated and presumptively identified as Plesiomonas sp. strain M6 was able to hydrolyze methyl parathion to p-nitrophenol. A novel organophosphate hydrolase gene designated mpd was selected from its genomic library prepared by shotgun cloning. The nucleotide sequence of the mpd gene was determined. The gene could be effectively expressed in Escherichia coli.     

抗对硫磷基因工程新型抗体的制备及初步鉴定

摘要: 【目的】提高抗对硫磷抗体的亲和力以提高酶联免疫检测的灵敏度。【方法】本研究通过抗对硫磷单链抗体基因和核心链霉亲和素基因片段的拼接重组,获得抗对硫磷单链抗体-核心链霉亲和素融合基因（scfv-sa）,并将该融合基因（scfv-sa）插入到表达载体pET28a(+)中,转化大肠杆菌BL21（DE3）进行原核表达,制备融合蛋白。SDS-PAGE和Western blot鉴定scfv-sa的表达,Ni+-NTA亲和层析柱纯化融合蛋白,并用ELISA方法测定该融合抗体的亲和力。【结果】结果表明,在大肠杆菌BL21（DE3）中该融合基因能表达出分子量约为46kD的融合蛋白,形成了四价结构域-四价聚合抗体。ELISA测定结果表明该抗体能与对硫磷特异结合,抗体效价在1:1×106以上,亲和常数为4.25×107 L /mol。 【结论】制备的抗对硫磷四价聚合抗体能与抗原特异结合,与单克隆抗体相比,抗原结合位点显著增加,ELISA检测灵敏度显著提高。     

Construction and application of a promoter-trapping vector with methyl parathion hydrolase gene mpd as the reporter

A facilitative and efficient promoter-trapping vector, pUC-mpd, was constructed with the promoterless methyl parathion hydrolase gene as the reporter. This reporter gene is easily used to clone promoters with different promoting strength on selective plates. Promoter regions of the ytkA and ywoF genes with strong promoting and signal peptide functions were cloned from the Bacillus subtilis 168 genomic promoter library with this vector.     

Production enhancement of the glycopeptide antibiotic A40926 by an engineered Nonomuraea gerenzanensis strain

Biotechnology Letters - To improve the production of A40926, a combined strategy of constructing the engineered strain and optimizing the medium was implemented. The engineered strain lcu1 with the...     

一株孕酮转化工程菌的构建

孕酮既是临床常用药物、又是可的松等药物的重要中间体,因此简便而快速的生产孕酮方法对于甾体激素的生产具有重要意义。本文利用红平红球菌的胆固醇氧化酶基因,构建了重组质粒BL21/p ET28b-cho E、并在大肠杆菌中获得重组表达。该菌株能够以孕烯醇酮为底物、转化生产孕酮。经条件优化,对浓度为0.2 g/L的孕烯醇酮的转化率大于80%。     

菌株DLL-1降解土壤和韭菜中甲基对硫磷的研究

施甲基对硫磷7．5、15和22．5kg·hm^-2(a．i．)时,韭菜中最终平均农药残留量为0．633、1．270和1．901mg·kg^-1,自然降解率分别为98．94％、96．44％和96．04％．施用高效农药残留降解菌剂能显著地降低农药残留的含量,施用75kg·hm^-2降解菌剂时,韭菜与土壤中平均农药残留量分别为0．269、0．099mg·kg^-1,与不施菌对照相比,能使农药进一步降低78．82％和98．68％．降解率随着菌剂用量增加而升高,当用量超过75kg·hm^-2时降解率不再提高．菌剂施用时间以施药后3d为最好．     

一株高效抗砷喜温硫杆菌工程菌的构建

利用DNA体外重组技术,将大肠杆菌质粒载体pUM3上的抗砷基因簇片段亚克隆到含有强启动子（tac启动子）并具有广泛寄主范围特性的IncQ族质粒pMMB24上,删除调节基因片段,构建了含有强启动子、可在tra基因诱动下转移的组成型表达的抗砷质粒pSDRA4。通过接合转移的方式将其导入专性自养极端嗜酸性喜温硫杆菌Acidithiobacillus caldus中,构建了冶金工程菌Acidithiobacillus caldus (pSDRA4),接合转移频率为（1.444±0.797）×10-4。表明在大肠杆菌和喜温硫杆菌之间成功地建立了一个遗传转移系统。经检测,重组质粒在喜温硫杆菌中具有较好的稳定性,在无选择压力条件下传代50次基本保持稳定（重组质粒保留76% 以上）。经抗砷性能检测,与野生菌相比,构建的喜温硫杆菌工程菌抗砷能力明显提高,从10mmol/L提高到45mmol/L。     

厌氧产脂肽工程菌的构建及其代谢活性评价

利用微生物产生生物表面活性剂驱油,是微生物采油的重要技术之一.但油藏的缺氧环境使得大多数生物表面活性剂产生菌的代谢活性受到限制.本研究以筛选自油田采出水中的好氧产脂肽类表面活性剂的解淀粉芽孢杆菌BQ-2和兼性厌氧的施氏假单胞菌DQ-1为亲本菌,通过原生质体融合的方法构建了一株能在厌氧条件下迅速生长并能产脂肽类表面活性剂的融合子JD-3.融合子JD-3的菌落形态与亲本菌株BQ-2相似,其16S rDNA序列与BQ-2的相似度达99%;在厌氧条件下培养36 h,融合子JD-3发酵液的表面张力由初始的63.0 mN·m^-1降至32.5 mN·m^-1;薄层层析及红外光谱分析结果显示,JD-3在厌氧条件下的产物为脂肽类表面活性剂;该表面活性剂的临界胶束浓度(CMC)为90 mg·L^-1,且对原油、液体石蜡、煤油等有较好的乳化活性.JD 3在厌氧条件下可以蔗糖、葡萄糖或甘油为碳源,以蛋白胨等为氮源合成脂肽类表面活性剂,且经多次厌氧传代培养仍保持稳定的产生物表面活性剂功能,显示该菌株在油藏厌氧条件下对提高原油采收率具有较好的应用潜力.     

Construction and characterization of an Escherichia coli strain genetically engineered for Ni(II) bioaccumulation

An Escherichia coli strain that accumulated Ni(II) was constructed by introducing the nixA gene (coding for a nickel transport system) from Helicobacter pylori into JM109 cells that expressed a glutathione S-transferase-pea metallothionein fusion protein. The resulting strain accumulated 15 micromol of Ni(II) per g (dry weight) from a 10 microM Ni(II) solution, four times the level taken up by JM109 cells. Ni(II) accumulation did not require an energy source, was inhibited by only 50% by 0.1 M NaCl, and occurred over the pH range from 3 to 9.     

Simultaneous biodegradation of methyl parathion and carbofuran by a genetically engineered microorganism constructed by mini-Tn5 transposon

A genetically engineered microorganism (GEM) capable of simultaneous degrading methyl parathion (MP) and carbofuran was successfully constructed by random insertion of a methyl parathion hydrolase gene (mpd) into the chromosome of a carbofuran degrading Sphingomonas sp. CDS-1 with the mini-transposon system. The GEM constructed was relatively stable and cell viability and original degrading characteristic was not affected compared with the original recipient CDS-1. The effects of temperature, initial pH value, inoculum size and alternative carbon source on the biodegradation of MP and carbofuran were investigated. GEM cells could degrade MP and carbofuran efficiently in a relatively broad range of temperatures from 20 to 30°C, initial pH values from 6.0 to 9.0, and with all initial inoculation cell densities (10⁵–10⁷ CFU ml⁻¹), even if alternative glucose existed. The optimal temperature and initial pH value for GEM cells to simultaneously degrade MP and carbofuran was at 30°C and at pH 7.0. The removal of MP and carbofuran by GEM cells in sterile and non-sterile soil were also studied. In both soil samples, 50 mg kg⁻¹ MP and 25 mg kg⁻¹ carbofuran could be degraded to an undetectable level within 25 days even if there were indigenous microbial competition and carbon sources effect. In sterile soil, the biodegradation rates of MP and carbofuran were faster, and the decline of the inoculated GEM cells was slower compared with that in non-sterile soil. The GEM constructed in this study was potential useful for pesticides bioremediation in natural environment.     

A self-transmissible plasmid of an enteropathogenic Escherichia coli strain codes for mannose-resistant haemagglutinin and for antibiotic resistance

Abstract Four enteropathogenic Escherichia coli strains were studied with respect to their antibiotic resistance characters, plasmid patterns, toxin production and haemagglutination properties. Two of these strains showed multiple antibiotic resistance characters, although all possessed several plasmids of varying sizes. One of the strains DD-41 showed the presence of a non-fimbrial cell-associated mannose-resistant haemagglutinin (MRHA) which was encoded by a 70 MDa plasmid. Conjugation experiments demonstrated that this MRHA-containing plasmid also coded for ampicillin and tetracycline resistance factors and was self-transmissible.     

产顺式-4-L-羟脯氨酸工程菌的构建及转化条件的优化

【目的】构建产顺式-4-L-羟脯氨酸(cis-4-Hyp)的工程菌并优化其转化条件。【方法】通过调整大肠杆菌的密码子偏好性以及mRNA二级结构对顺式-4-L-脯氨酸羟化酶(cis-P4H)基因进行优化,构建该基因的表达菌株。采用Ni-NTA亲和层析柱分离纯化cis-P4H,测定cis-P4H的酶活和稳定性。然后采用全细胞催化法制备cis-4-Hyp,通过单因素试验和正交试验对相关的转化条件进行优化。【结果】构建了一株产cis-4-Hyp的工程菌,cis-P4H的比活为2.65 U/mg,半衰期为2.32 h。经过条件优化后,采用OD600为0.9时加入IPTG获得的工程菌菌体构建转化体系,在转化体系pH 6.5,转化温度为31°C,转化时间为60 h时,L-脯氨酸转化率最高达到83.33%。【结论】研究获得的工程菌及转化条件具有良好的工业应用前景。     

鼠伤寒沙门氏菌baeR过表达株的构建及其耐药性

[背景]鼠伤寒沙门氏菌（Salmonella typhimurium）是一种重要的人兽共患病原菌,其多重耐药性问题日益严重,双组分系统可调控鼠伤寒沙门氏菌的耐药性。[目的]通过构建鼠伤寒沙门氏菌baeR过表达株及回补株探究BaeSR双组分系统对鼠伤寒沙门氏菌耐药性的影响。[方法]在BaeSR双组分系统和AcrB外排泵双缺失株（CRΔbaeSRΔacrB）的基础上构建baeR过表达株（CRpbaeRΔbaeSRΔacrB）及baeR回补株（CRcbaeRΔbaeSRΔacrB）,测定双缺失株、回补株和过表达株的最小抑菌浓度（minimum inhibitory concentration,MIC）,并对其生长特性、生物膜形成能力及运动性进行分析。采用转录组学技术筛选与耐药相关的差异表达基因,RT-qPCR验证耐药相关基因。[结果]构建了鼠伤寒沙门氏菌baeR过表达株和baeR回补株。与双缺失株相比,过表达株对氧氟沙星、恩诺沙星、氟苯尼考、乙酰甲喹、头孢他啶、头孢噻呋、阿莫西林和氨苄西林的MIC分别升高2-256倍,对大观霉素、安普霉素的MIC下降了50%;与双缺失株相比,回补株对头孢他啶...     

Methyl parathion hydrolase based nanocomposite biosensors for highly sensitive and selective determination of methyl parathion

This article reports the fabrication of a nanocomposite biosensor for the sensitive and specific detection of methyl parathion. The nanocomposite sensing film was prepared via the formation of gold nanoparticles on silica particles, mixing with multiwall carbon nanotubes and subsequent covalent immobilization of methyl parathion hydrolase. The composite of the individual materials was finely tuned to offer the sensing film with high specific surface area and high conductivity. A significant synergistic effect of nanocomposites on the biosensor performance was observed in biosensing methyl parathion. The square wave voltammetric responses displayed well defined peaks, linearly proportional to the concentrations of methyl parathion in the range from 0.001 μg mL?1 to 5.0 μg mL?1 with a detection limit of 0.3 ng mL?1. The application of this biosensor in the analysis of spiked garlic samples was also evaluated. The proposed protocol can be used as a platform for the simple and fast construction of biosensors with good performance for the determination of enzyme-specific electroactive species.     

Isolation and characterization of a bacterial strain of the genus Ochrobactrum with methyl parathion mineralizing activity

AIMS: To isolate and characterize a methyl parathion (MP)-mineralizing bacterium, and to elucidate the degradative pathway of MP and localize the responsible degrading genes. METHODS AND RESULTS: A bacterial strain, designated B2, capable of mineralizing MP was isolated from the MP-polluted soil. Analysis of the 16S rRNA gene sequence and phenotypic analysis suggested that strain B2 had a close relationship with Ochrobactrum anthropi. B2 could totally degrade MP and four metabolites [p-nitrophenol (PNP), 4-nitrocatechol (4-NC), 1,2,4-benzenetriol (BT) and hydroquinone (HQ)] were identified by HPLC and gas chromatography-mass spectrometry analyses. Plasmid curing of strain B2 resulted in the loss of ability of B2 to degrade PNP, but not the ability to hydrolyse MP. CONCLUSIONS: Ochrobactrum sp. B2 can mineralize MP rapidly via PNP, 4-NC, BT and HQ pathway. B2 harbours a plasmid encoding the ability to degrade PNP, while MP-hydrolysing activity is encoded on the bacterial chromosome. SIGNIFICANCE AND IMPACT OF THE STUDY: This new bacterial strain (B2) capable of mineralizing MP will be useful in a pure-culture remediation process of organophosphate pesticides and their metabolites such as nitroaromatics.     

菌株DLL-1降解土壤和韭菜中甲基对硫磷的研究

施甲基对硫磷7.5、15和22.5kg·hm^-2(a.i.)时,韭菜中最终平均农药残留量为0.633、1.270和1.901mg·kg^-1,自然降解率分别为98.94%、96.44%和96.04%.施用高效农药残留降解菌剂能显著地降低农药残留的含量,施用75kg·hm^-2降解菌剂时,韭菜与土壤中平均农药残留量分别为0.269、0.099mg·kg^-1,与不施菌对照相比,能使农药进一步降低78.82%和98.68%.降解率随着菌剂用量增加而升高,当用量超过75kg·hm^-2时降解率不再提高.菌剂施用时间以施药后3d为最好.