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1.
作物杂种后代基因型值和杂种优良的预测方法 总被引:53,自引:4,他引:53
本文提出了利用作物亲本和F1预测杂种后代基因型值和杂种优势的统计分析方法。该方法运用加性-显性遗传模型,分析双列杂交试验资料,用MINQUE(1)法估算方差分量以及预测遗传效应值。由加性和显笥效应预测值可进一步预测F1,F2,BC1,BC2,等不同世代的基因型值,在预测F1群体平均优势和 群丛超亲优势的基础上,可以推导出其它各世代的杂种优势。提出了预测杂种后代保持超亲优热世代数的简单公式,根据杂交组合F1群体平均优势和双亲相对遗传差异,便可预测该组合能的生产上直接利用的世代数。以棉花六个品种完全双列杂交试验资料为例,分析了各组合F1和F2的 基因型值、超亲优势和保持5%超亲优势的世代数。 相似文献
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三交组合农艺性状的遗传模型及杂种优势预测方法 总被引:3,自引:1,他引:3
本文根据广义遗传模型的建模原理,按照三交组合方式的交配设计,提出了分析作物三交组合数量性状的加性-显性-上位性模型(ADAA模型),给出了不同环境下各世代群体的遗传效应分量,介绍了相应的统计分析方法,并推导了根据基因型值进一步预测三交组合后代杂种优势的一般公式. 相似文献
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作物品种间杂种优势遗传分析的新方法 总被引:95,自引:3,他引:95
本文提出了分析双列杂交试验资料的两个遗传模型。第一个模型包括加性、显性和母体效应;第二个模型只包括简单的加性和显性效应。还介绍了分析杂种优势、估算遗传方差分量以及预测遗传效应值的相应统计分析方法。用所介绍的遗传模型和分析方法以及常用的Griffing配合力分析方法,分析了棉花6个品种双列杂交的产量性状,并进一步比较了不同方法的分析结果。采用本文所介绍的遗传模型和分析方法,可以克服用Griffing的配合力模型及其方法分析杂种优势和配合力遗传表现所存在的局限性。 相似文献
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应用分子标记差异性预测作物杂种优势的研究进展 总被引:10,自引:0,他引:10
应用分子标记差异性预测作物杂种优势的研究进展李春丽①(中国水稻研究所生物工程系,杭州310006)TheProgressinPredictionofPlantHeterosisUsingMolecularMarkerLiChunli②(Departm... 相似文献
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综合性状及其分量的多元条件分析 总被引:6,自引:2,他引:6
提出基于混合线性模型的多元条件分析方法,用于分析复杂综合性状的分量对其目标性状的贡献。定义了贡献率和贡献遗传效应两个概念,贡献率测定给定分量性状的遗传变异对目标性状的贡献比率,贡献遗传效应衡量给定分量性状的遗传效应对目标性状的贡献值。运用所提出的新方法分析了棉花籽棉产量的3个分量对产量的贡献。 相似文献
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《Animal : an international journal of animal bioscience》2019,13(11):2429-2439
The partition of the total genetic variance into its additive and non-additive components can differ from trait to trait, and between purebred and crossbred populations. A quantification of these genetic variance components will determine the extent to which it would be of interest to account for dominance in genomic evaluations or to establish mate allocation strategies along different populations and traits. This study aims at assessing the contribution of the additive and dominance genomic variances to the phenotype expression of several purebred Piétrain and crossbred (Piétrain × Large White) pig performances. A total of 636 purebred and 720 crossbred male piglets were phenotyped for 22 traits that can be classified into six groups of traits: growth rate and feed efficiency, carcass composition, meat quality, behaviour, boar taint and puberty. Additive and dominance variances estimated in univariate genotypic models, including additive and dominance genotypic effects, and a genomic inbreeding covariate allowed to retrieve the additive and dominance single nucleotide polymorphism variances for purebred and crossbred performances. These estimated variances were used, together with the allelic frequencies of the parental populations, to obtain additive and dominance variances in terms of genetic breeding values and dominance deviations. Estimates of the Piétrain and Large White allelic contributions to the crossbred variance were of about the same magnitude in all the traits. Estimates of additive genetic variances were similar regardless of the inclusion of dominance. Some traits showed relevant amount of dominance genetic variance with respect to phenotypic variance in both populations (i.e. growth rate 8%, feed conversion ratio 9% to 12%, backfat thickness 14% to 12%, purebreds-crossbreds). Other traits showed higher amount in crossbreds (i.e. ham cut 8% to 13%, loin 7% to 16%, pH semimembranosus 13% to 18%, pH longissimus dorsi 9% to 14%, androstenone 5% to 13% and estradiol 6% to 11%, purebreds-crossbreds). It was not encountered a clear common pattern of dominance expression between groups of analysed traits and between populations. These estimates give initial hints regarding which traits could benefit from accounting for dominance for example to improve genomic estimated breeding value accuracy in genetic evaluations or to boost the total genetic value of progeny by means of assortative mating. 相似文献
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加性-显性-母体效应及GE互作效应遗传模型的模拟比较 总被引:2,自引:0,他引:2
运用蒙特卡罗方法比较了8个亲本正反应的加性-显性-母体效应的全模型及缩减模型,当σ^2M和σ^2ME存在时,检测各项遗传方差分量的功效高达97%以上,如何存在σ^2M和σ^2ME而缩减模型未包括这两项效应时,除显性效应以外的各项方差分量都被高估。对于加性-显性模型,如果忽略了基因型与环境互作,σ^2ε和σ^2A将被高估。当母体效应和基因型与环境互作被忽略时,将显著地增加遗传效应预测值的方差。 相似文献
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Yu Y Wyszynski DF Waterworth DM Wilton SD Barter PJ Kesäniemi YA Mahley RW McPherson R Waeber G Bersot TP Ma Q Sharma SS Montgomery DS Middleton LT Sundseth SS Mooser V Grundy SM Farrer LA 《Journal of lipid research》2005,46(10):2202-2213
We conducted a genome-wide scan using variance components linkage analysis to localize quantitative-trait loci (QTLs) influencing triglyceride (TG), high density lipoprotein-cholesterol (HDL-C), low density lipoprotein-cholesterol, and total cholesterol (TC) levels in 3,071 subjects from 459 families with atherogenic dyslipidemia. The most significant evidence for linkage to TG levels was found in a subset of Turkish families at 11q22 [logarithm of the odds ratio (LOD)=3.34] and at 17q12 (LOD=3.44). We performed sequential oligogenic linkage analysis to examine whether multiple QTLs jointly influence TG levels in the Turkish families. These analyses revealed loci at 20q13 that showed strong epistatic effects with 11q22 (conditional LOD=3.15) and at 7q36 that showed strong epistatic effects with 17q12 (conditional LOD=3.21). We also found linkage on the 8p21 region for TG in the entire group of families (LOD=3.08). For HDL-C levels, evidence of linkage was identified on chromosome 15 in the Turkish families (LOD=3.05) and on chromosome 5 in the entire group of families (LOD=2.83). Linkage to QTLs for TC was found at 8p23 in the entire group of families (LOD=4.05) and at 5q13 in a subset of Turkish and Mediterranean families (LOD=3.72). These QTLs provide important clues for the further investigation of genes responsible for these complex lipid phenotypes. These data also indicate that a large proportion of the variance of TG levels in the Turkish population is explained by the interaction of multiple genetic loci. 相似文献
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Models to estimate maternally controlled genetic variation in quantitative seed characters 总被引:17,自引:0,他引:17
M. R. Foolad R. A. Jones 《TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik》1992,83(3):360-366
Summary Estimating quantitative contributions to specific traits can be accomplished from a variety of genetic models (Mather 1949; Mather and Jinks 1971; Falconer 1981). Residual genetic effects, those beyond main and interaction effects of the embryo genotype, are often pooled under a single classification, termed maternal effects. Maternal contributions to seed-related traits can originate from various maternal sources (e.g., endosperm, testa and cytoplasm). Quantitative contributions of a maternal nature are not predictable from parental performance and effects are largely non-persistent over generations (Jinks et al. 1972). The methods used to determine maternal effects in quantitative traits often do not measure quantitative genetic parameters, while those that do are either complex or partially resolve potential contributions of individual sources of maternal effects. We present simple genetic models for estimating quantitative genetic parameters which take into account maternal effects expressed in the major seed tissues of higher plants. 相似文献
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López-Fanjul C Fernández A Toro MA 《Evolution; international journal of organic evolution》2002,56(5):865-876
The effect of population bottlenecks on the components of the genetic variance generated by two neutral independent epistatic loci has been studied theoretically (VA, additive; VD, dominant; VAA, additive x additive; VAD, additive x dominant; VDD; dominant x dominant components of variance). Nonoverdominance and overdominance models were considered, covering all possible types of marginal gene action at the single locus level. The variance components in an infinitely large panmictic population (ancestral components) were compared with their expected values at equilibrium, after t consecutive bottlenecks of equal size N (derived components). Formulae were obtained in terms of allele frequencies and effects at each locus and the corresponding epistatic value. An excess of VA after bottlenecks can be assigned to two sources: (1) the spatiotemporal changes in the marginal average effects of gene substitution alpha(i), which are equal to zero only for additive gene action within and between loci; and (2) the covariance between alpha2(i) and the heterozygosity at the loci involved, which is generated by dominance, with or without epistasis. Numerical examples were analyzed, indicating that an increase in VA after bottlenecks will only occur if its ancestral value is minimal or very small. For the nonoverdominance model with weak reinforcing epistasis, that increase has been detected only for extreme frequencies of the negative allele at one or both loci. With strong epistasis, however, this result can be extended to a broad range of intermediate frequencies. With no epistasis, the same qualitative results were found, indicating that dominance can be considered as the primary cause of an increase in VA following bottlenecks. In parallel, the derived total nonadditive variance exceeded its ancestral value (V(NA) = V(D) + V(AA) + V(AD) + V(DD)) for a range of combinations of allele frequencies covering those for an excess of VA and for very large frequencies of the negative allele at both loci. For the overdominance model, an increase in V(A) and V(NA) was respectively observed for equilibrium (intermediate) frequencies at one or both loci or for extreme frequencies at both loci. For all models, the magnitude of the change of V(A) and V(NA) was inversely related to N and t. At low levels of inbreeding, the between-line variance was not affected by the type of gene action. For the models considered, the results indicate that it is unlikely that the rate of evolution may be accelerated after population bottlenecks, in spite of occasional increments of the derived V(A) over its ancestral value. 相似文献
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R. K. Gumber B. Schill W. Link E. v. Kittlitz A. E. Melchinger 《TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik》1999,98(3-4):569-580
Determining the genetic potential of a base population from the properties of their parental lines would improve the efficiency
of a breeding program. In the present study, we investigated whether the means of the parents and the genetic distance determined
from RAPD data (GD) or multivariate analysis (Mahalanobis D2), mid-parent heterosis (MPH), and the absolute difference between means of the parents (∣P1−P2∣) can be used for predicting the means and genetic variances (σ^2
g
) of F3:4 lines derived from different crosses in faba beans. The material comprised 18 intra- and 18 inter-pool crosses among lines
from the Minor, Major, and Mediterranean germplasm pools. Fifty F3:4 lines from each cross were evaluated for days to anthesis, plant height, seeds per plant, and seed yield in German (GE) and
Mediterranean (ME) environments. GD estimates between parent lines ranged from 0.38 to 0.58, while D2 ranged from 45.5 to 134.7. Correlations between means of the parents and F3:4 lines were highly significant for most traits. Estimates of σ2
g
for all traits showed non-significant correlations with MPH, GD, D2. In one ME, ∣P1−P2∣ had significant associations with σ^2
g
for seed yield and days to anthesis. The predicted usefulness of crosses, defined as the sum of the population mean and selection
responses, was most closely associated with the means of F3:4 lines. We conclude from this study that the means of F3:4 lines can be predicted from the means of the parents, whereas the prediction of genetic variance is still an unsolved problem
Received: 12 December 1997 / Accepted: 13 July 1998 相似文献
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J. B. St. Clair W. T. Adams 《TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik》1991,81(4):541-550
Summary Open-pollinated Douglas-fir (Pseudotsuga menziesii var menziesii (Mirb.) Franco) families were tested in three contrasting competitive environments to test the hypothesis that relative performance as measured by total seedling dry weight is dependent upon distance or genotype of neighbors. The three competitive environmnts included (1) a mixture of individuals from all families planted at close spacing, (2) single (pure) family blocks planted at close spacing, and (3) individuals from all families planted at a wide, non-competitive spacing. Despite occasional large changes in rank between competitive environments and only moderate correlations of family means between competitive environments, the family x competitive environment interaction was non-significant. Furthermore, families did not differ significantly in competitive ability or density tolerance. The competitive environment in which seedlings were grown, however, had a large effect on estimates of variance components, which in turn led to large differences in estimates of heritability and genetic gain. Evaluation of families in mixture resulted in the largest estimates of heritability, while evaluation in pure family blocks resulted in the lowest. Analysis of correlated response to selection indicated that testing and selection in mixture result in the largest estimated gain, even if progeny of selected individuals are subsequently grown in a pure or non-competitive environment.Paper No. 2659 of the Forest Research Laboratory, Oregon State University 相似文献
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Michael J. Wade Stephen M. Shuster Lori Stevens 《Evolution; international journal of organic evolution》1996,50(2):723-733
We report our studies of the effect of inbreeding on the response to selection for increased pupal weight in the flour beetle, Tribolium castaneum. We also report the effects of inbreeding and selection for pupal weight on the heritable variation in fitness and fitness components. We created replicate and independent inbred lines with F-values of 0.00, 0.375, and 0.672, by 0, 2, and 5 generations, respectively, of brother-sister mating of adult beetles from an outbred stock population. Subsequently, we imposed artificial within-family selection for increased pupal weight in each of 15 inbred lines for eight generations; each line had its own paired, unselected control. We compared the response to selection across the three levels of inbreeding with theoretical expectation, and investigated the effects of inbreeding and selection on fitness variation among families within all 30 selected and control lines. Among-line variation in pupal weight increased with increased inbreeding prior to selection but diminished with directional selection. Inbreeding reduced the realized heritability of pupal weight concordant with quantitative predictions of additive theory. Mean fitness, measured in several ways, declined with inbreeding and declined further with selection. In contrast, the genetic variation for fitness in the inbred and selected lines lines equalled or exceeded that of the outbred controls. Our results suggest that inbreeding and selection may affect traits in different ways depending on the relative amounts of additive and nonadditive genetic variation. 相似文献