Soil amendment with biochar and manure alters wood stake decomposition and fungal community composition

Biochar and manure can be used for sustainable land management. However, little is known about how soil amendments might affect surface and belowground microbial processes and subsequent wood decomposition. In a split-split-split plot design, we amended soil with two rates of manure (whole plot; 0 and 9 Mg ha⁻¹) and biochar (split plot; 0 and 10 Mg ha⁻¹). Wood stakes of three species (hybrid poplar, triploid Populus tomentosa Carr.; aspen, Populus tremuloides Michx.; and pine, Pinus taeda L.) were placed in two positions (horizontally on the soil surface, and inserted vertically in the mineral soil), which served as a substrate for fungal growth. In 3 years, the decomposition rate (density loss), moisture content, and fungal community (via high-throughput sequencing methods) of stakes were evaluated. Results indicated that biochar and/or manure increased the wood stake decomposition rates, moisture content, and operational taxonomic unit abundance. However, the richness and diversity of fungi were dependent on wood stake position (surface > mineral), species (pine > the two Populus), and sample dates. This study highlights that soil amendment with biochar and/or manure can alter the fungal community, which in turn can enhance an important soil process (i.e., decomposition).     

Fossil wood of <Emphasis Type="Italic">Pinus priamurensis</Emphasis> sp. nov. (Pinaceae) from the Miocene deposits of the Erkovetskii Brown Coal Field,Amur Region

New species of the pine fossil wood, Pinus priamurensis sp. nov. (Pinaceae) from the Sazanka Formation (upper Middle Miocene–Upper Miocene) of the Erkovetskii Brown Coal Field (Amur Region) is described. The new species shares some wood anatomical features with modern species of the subsection Pinus (section Pinus, subgenus Pinus). This is the first record of fossil wood of Pinus in the Amur Region.     

A multitrophic interaction: consequences of grazing on decomposition of needles of <Emphasis Type="Italic">Pinus pinea</Emphasis> L. by <Emphasis Type="Italic">Ommatoiulus sabulosus</Emphasis> L.

The aim of this study was to assess how the physical (needle fragmentation by trampling) and chemical (nutritional enrichment from faeces) changes brought about by grazing influence the consumption of needles of Pinus pinea L. by Ommatoiulus sabulosus L. Adult individuals of O. sabulosus were introduced into trays with pine needles subjected to four treatments: (i) intact needles, (ii) trampled needles, (iii) intact needles fertilized with liquid manure, and (iv) trampled needles fertilized with liquid manure. After 30 days, litter decomposition was determined as a function of mass loss over time. Biometric and chemical characteristics of the needles were also measured. The pine needle decomposition rate was significantly higher in the presence of O. sabulosus (20–40%) than in its absence, presenting in addition a significantly higher rate in the treatments enriched with nitrogen. Average needle length was significantly shorter in the trampled treatments (6.89 ± 0.50 cm) than in those with intact needles (11.95 ± 0.69 cm). With regard to leaf mass per area and resistance to breakage, no significant differences were found. The fertilized treatments presented significantly higher N content (50% higher) than those in the non-fertilized ones with a significantly lower C:N ratio. The results of the present study indicate that goat grazing (which produces both trampling and fertilization) favoured the consumption of pine needles by O. sabulosus, which thus influences, along with the microbial community, the decomposition rate of these needles and thereby promotes incorporation of N into the system.     

Wood-decay type and fungal guild dominance across a North American log transplant experiment

We incubated 196 large-diameter aspen (Populus tremuloides), birch (Betula papyrifera), and pine (Pinus taeda) logs on the FACE Wood Decomposition Experiment encompassing eight climatically-distinct forest sites in the United States. We sampled dead wood from these large-diameter logs after 2 to 6 y of decomposition and determined wood rot type as a continuous variable using the lignin loss/density loss ratio (L/D) and assessed wood-rotting fungal guilds using high-throughput amplicon sequencing (HTAS) of the ITS-2 marker. We found L/D values in line with a white rot dominance in all three tree species, with pine having lower L/D values than aspen and birch. Based on HTAS data, white rot fungi were the most abundant and diverse wood-rotting fungal guild, and soft rot fungi were more abundant and diverse than brown rot fungi in logs with low L/D values. For aspen and birch logs, decay type was related to the wood density at sampling. For the pine logs, decay type was associated with the balance between white and brown/soft rot fungi abundance and OTU richness. Our results demonstrate that decay type is governed by biotic and abiotic factors, which vary by tree species.     

Pine stumps act as hotspots for seedling regeneration after pine dieback in a mixed natural forest dominated by <Emphasis Type="Italic">Chamaecyparis obtusa</Emphasis>

Over the past few decades, rural forest ecosystems in Japan have experienced dynamic vegetation changes due to forest dieback and changes in land use, leading to the loss of local species populations and biodiversity. The aim of this study was to evaluate the importance of pine (Pinus densiflora) stumps and logs for tree seedling regeneration in a mixed natural forest in Kyoto Prefecture, Japan, that had previously experienced severe pine dieback, and to determine which factors most greatly affect seedling establishment. Seedlings of 17 tree species were recorded on pine stumps and logs in later stages of decay, among which Chamaecyparis obtusa and Rhododendron reticulatum were most dominant. Both of these species had a greater density on pine stumps than on logs or soil, despite stumps covering less than 0.5% of the study area. In addition, the seedling densities of both species were positively associated with moss cover on coarse woody debris, but negatively associated with wood pH. Brown rot in the sapwood and heartwood, which occurred more frequently in stumps than in logs, also positively associated with the seedling densities of both species. Predictive modelling showed that C. obtusa seedlings exhibited a stronger response to pH in stumps than in logs. Therefore, since brown-rotted wood is acidic due to fungal decay activities, brown-rotted pine stumps may present hotspots of C. obtusa seedling regeneration at the study site.     

Effect of <Emphasis Type="Italic">Pinus ponderosa</Emphasis> afforestation on soilborne <Emphasis Type="Italic">Frankia</Emphasis> and saprophytic Actinobacteria in Northwest Patagonia,Argentina

Large areas in the extra-Andean region in the forest - steppe ecotone in “Northwestern Argentinean Patagonia” have been replaced by plantations of the exotic conifer Pinus ponderosa which modify soils physical and chemical factors and alter the biodiversity. Considering that in the region occur saprophytic soilborne actinobacteria that play important role as the fixation of atmospheric nitrogen (N₂) in symbiosis with native plant species and the production of bioactive molecules in plants rhizosphere, we aimed to study the effect of the plantation on the abundance of the N₂ fixer Frankia and on the genus diversity of cultivable rhizospheric actinobacteria. The study was performed with soils of six paired sites with pine plantations and natural neighbor areas (including steppes or shrublands). Abundance of infective Frankia was estimated by evaluating the nodulation capacity of soils, through a plant bioassay using Ochetophila trinervis as trap plant. Isolation trials for saprophytic actinobacteria were performed by applying chemotactic and successive soils dilutions methods. We concluded that P. ponderosa afforestation affect soil actinobacteria. This was mainly evidenced by a decrease in the Frankia nodulation capacity in O. trinervis, which was related to plantation age, to lower soil carbon and nitrogen content, higher available phosphorus, and to a slight decrease in soils pH. Pine plantation influence on the cultivable saprophytic actinobacteria was less clear. The study highlights the importance of soils as source of Frankia and rhizospheric actinobacteria in relation to disturbance caused by pine plantation in natural environments with native actinorhizal plant species.     

Responses of litter decomposition and nutrient release rate to water and nitrogen addition differed among three plant species dominated in a semi-arid grassland

Background and aims

Precipitation and nitrogen (N) deposition are predicted to increase in northern China. The present paper aimed to better understand how different dominant species in semi-arid grasslands in this region vary in their litter decomposition and nutrient release responses to increases in precipitation and N deposition.

Methods

Above-ground litter of three dominant species (two grasses, Agropyron cristatum and Stipa krylovii, and one forb, Artemisia frigida) was collected from areas without experimental treatments in a semi-arid grassland in Inner Mongolia. Litter decomposition was studied over three years to determine the effects of water and N addition on litter decomposition rate and nutrient dynamics.

Results

Litter mass loss and nutrient release were faster for the forb species than for the two grasses during decomposition. Both water and N addition increased litter mass loss of the grass A. cristatum, while the treatments showed no impacts on that of the forb A. frigida. Supplemental N had time-dependent, positive effects on litter mass loss of the grass S. krylovii. During the three-year decomposition study, the release of N from litter was inhibited by N addition for the three species, and it was promoted by water addition for the two grasses. Across all treatments, N and potassium (K) were released from the litter of all three species, whereas calcium (Ca) was accumulated. Phosphorus (P) and magnesium (Mg) were released from the forb litter but accumulated in the grass litter after three years of decomposition.

Conclusions

Our findings revealed that the litter decomposition response to water and N supplementation differed among dominant plant species in a semi-arid grassland, indicating that changes in dominant plant species induced by projected increases in precipitation and N deposition are likely to affect litter decomposition, nutrient cycling, and further biogeochemical cycles in this grassland. The asynchronous nutrient release of different species’ litter found in the present study highlights the complexity of nutrient replenishment from litter decomposition in the temperate steppe under scenarios of enhancing precipitation and N deposition.

     

Short-term effects of thinning and liming on forest soils of pitch pine and Japanese larch plantations in central Korea

The influences of thinning (50% of standing density) and liming (Ca+Mg, 2 Mg ha⁻¹) on soil chemical properties were investigated for 2 years (2001, 2002) in 40-year-old pitch pine (Pinus rigida Mill.) and 44-year-old Japanese larch (Larix leptolepis Gord.) plantations established on similar soils. In general, soil properties varied significantly among plantations and treatments. For both plantations, thinning significantly increased soil organic C (SOC) concentrations whereas there were no significant changes in soil pH and Ca and Mg concentrations. In addition, thinning increased total soil N and Na concentrations for the pitch pine plantation and available P concentration for the Japanese larch plantation in the second year after the treatment. Liming did not affect soil chemical characteristics for the pitch pine plantation except for Na concentration. However, for the Japanese larch plantation, liming significantly increased soil pH and K, Ca and Mg concentrations and decreased SOC and total soil N concentrations. For both plantations, soil Al concentration did not change after thinning and liming and decreased exponentially with increased pH values. The increases in SOC and total soil N concentrations after thinning were possibly due to increases in decomposition of organic matter and root death. Although differences were not statistically significant, soil available P concentration tended to increase at early stages of liming for both plantations. These results suggested that thinning and liming seemed to regulate soil chemical properties for pitch pine and Japanese larch plantations established on similar soils.     

Large proportion of wood dependent lichens in boreal pine forest are confined to old hard wood

Intensive forest management has led to a population decline in many species, including those dependent on dead wood. Many lichens are known to depend on dead wood, but their habitat requirements have been little studied. In this study we investigated the habitat requirements of wood dependent lichens on coarse dead wood (diameter >10 cm) of Scots pine Pinus sylvestris in managed boreal forests in central Sweden. Twenty-one wood dependent lichen species were recorded, of which eleven were confined to old (estimated to be >120 years old) and hard dead wood. Almost all of this wood has emanated from kelo trees, i.e. decorticated and resin-impregnated standing pine trees that died long time ago. We found four red-listed species, of which two were exclusive and two highly associated with old and hard wood. Lichen species composition differed significantly among dead wood types (low stumps, snags, logs), wood hardness, wood age and occurrence of fire scars. Snags had higher number of species per dead wood area than logs and low stumps, and old snags had higher number of species per dead wood area than young ones. Since wood from kelo trees harbours a specialized lichen flora, conservation of wood dependent lichens requires management strategies ensuring the future presence of this wood type. Besides preserving available kelo wood, the formation of this substratum should be supported by setting aside P. sylvestris forests and subject these to prescribed burnings as well as to allow wild fires in some of these forests.     

Litter decomposition of a pine plantation is affected by species evenness and soil nitrogen availability

Background and aims

Litter decomposition is a key process controlling flows of energy and nutrients in ecosystems. Altered biodiversity and nutrient availability may affect litter decomposition. However, little is known about the response of litter decomposition to co-occurring changes in species evenness and soil nutrient availability.

Methods

We used a microcosm experiment to evaluate the simultaneous effects of species evenness (two levels), identity of the dominant species (three species) and soil N availability (control and N addition) on litter decomposition in a Mongolian pine (Pinus sylvestris var. mongolica) plantation in Northeast China. Mongolian pine needles and senesced aboveground materials of two dominant understory species (Setaria viridis and Artemisia scoparia) were used for incubation.

Results

Litter evenness, dominant species identity and N addition significantly affected species interaction and litter decomposition. Higher level of species evenness increased the decomposition rate of litter mixtures and decreased the incidence of antagonistic effects. A. scoparia-dominated litter mixtures decomposed faster than P. sylvestris var. mongolica- and S. viridis-dominated litter mixtures. Notably, N addition increased decomposition rate of both single-species litters and litter mixtures, and meanwhile altered the incidence and direction of non-additive effects during decomposition of litter mixtures. The presence of understory species litters stimulated the decomposition rate of pine litters irrespective of N addition, whereas the presence of pine litters suppressed the mass loss of A. scoparia litters. Moreover, N addition weakened the promoting effects of understory species litters on decomposition of pine litters.

Conclusions

Pine litter retarded the decomposition of understory species litters whereas its own decomposition was accelerated in mixtures. Nitrogen addition and understory species evenness altered species interaction through species-specific responses in litter mixtures and thus affected litter decomposition in Mongolian pine forests, which could produce a potential influence on ecosystem C budget and nutrient cycling.     

Does tree species composition affect soil CO<Subscript>2</Subscript> emission and soil organic carbon storage in plantations?

Key message

Mixed tree plantations are potential silvicultural systems to increase soil carbon storage through altering litter and root inputs and soil physiochemical properties.

Abstract

Afforestation and reforestation are major strategies for global climate change mitigation. Different tree species composition can induce diverse changes in soil CO₂ emission and soil carbon sequestration in tree plantation. This study employed three plantations of monoculture and mixed Pinus yunnanensis and Eucalyptus globulus to estimate the effect of tree species composition on soil CO₂ emission and soil organic carbon storage in subtropical China. We found that tree species composition had a significant effect on the soil CO₂ emission and soil organic carbon storage. Soil CO₂ emission was lower in the mixed plantation than in the P. yunnanensis plantation, whereas it was higher than in the E. globulus plantation. Differences in soil CO₂ emission among the three plantations were determined by leaf litterfall mass, fine root biomass, soil available nitrogen, pH, soil bulk density, and soil C:N ratio. Soil organic carbon storage was 34.5 and 23.2 % higher in the mixed plantation than in the P. yunnanensis and E. globulus plantations, respectively. Higher soil organic carbon stock in the mixed plantation was attributed to lower C/N ratio of leaf litter and soil, greater fine root biomass and soil organic carbon content, and lower soil CO₂ emission. We conclude that mixed tree plantation can enhance soil carbon sequestration, but can decrease or increase soil CO₂ emission through altering litter and root inputs and soil physiochemical properties.

     

Role of insect vectors in epidemiology and invasion risk of <Emphasis Type="Italic">Fusarium circinatum</Emphasis>, and risk assessment of biological control of invasive <Emphasis Type="Italic">Pinus contorta</Emphasis>

Pitch canker, caused by the pathogen Fusarium circinatum, is a serious disease of pines, Pinus species. It is a threat to natural and planted pine forests, and to date it has invaded countries across five continents. Pine-feeding insects can play a key role in the epidemiology of the disease, as wounding agents allowing pathogen access or as vectors transmitting the pathogen from infected to healthy trees. We reviewed the role of insects in the epidemiology of pitch canker worldwide and assessed which insects are present in New Zealand that may act as wounding agents or vectors to determine whether pathogen invasion could adversely affect Pinus radiata plantation forests and urban trees. We also evaluated whether cone or seed insects of pines could be introduced as biological control agents of invasive Pinus contorta and how this may affect the impact of a potential F. circinatum invasion. As there are no native pines or other Pinaceae in New Zealand, there are only a few pine insects, mainly accidental introductions. None of the insects recorded on pines in New Zealand is likely to be a vector, suggesting low disease risk. Of six potentially suitable biocontrol candidates, the European pine cone weevil Pissodes validirostris is the most promising regarding host specificity and impact on seed production, but there is uncertainty about its ability to act as a vector of F. circinatum. Our methodology to review and evaluate the vector potential of pine associates can be used as a generic framework to assess the potential impacts of F. circinatum invasion.     

Higher accumulation capacity of cadmium than zinc by <Emphasis Type="Italic">Arabidopsis halleri ssp. germmifera</Emphasis> in the field using different sowing strategies

Background and Aims

Litter decomposition serves an important role in maintaining nitrogen (N) availability within forest ecosystems. However, the interactive effects of exogenous N, drought, and litter quality and mixing on N immobilization during decomposition remain unclear. The aim of this study was to assess the effects of litter quality, reduced precipitation, N addition, and their interactions on litter mass loss and N immobilization.

Methods

This field study analyzed the effects of N addition and decreased precipitation on the decomposition rates and associated N immobilization of four types of litter: Quercus mongolica (QM), Tilia amurensis (TA), Pinus koraiensis (PK), and a mixture (MIX) of all three. The chemical quality of the MIX was prepared in a 4:3:3 (mass) ratio of PK, TA, and QM litters. Litterbags were placed in an N addition and precipitation manipulation forest field and collected after 92, 154, 365, 457, and 874 days. Decomposing litter residues were characterized for mass loss and N content to assess N immobilization.

Results

The addition of N had no significant effect on litter decomposition under both precipitation conditions, but a reduction in precipitation significantly depressed litter decomposition. The increases in N immobilization with N addition depended on the litter type and decomposition period. Precipitation reduction had significant effects on N immobilization and enhanced the magnitude and duration of N immobilization in decomposing litter, and both of which can be increased by N addition. The results indicate that the litter species is the major regulator that controls mass loss and N immobilization. Furthermore, the MIX treatment did not show non-additive effects on mass loss but did exhibit some weak synergistic effects on N immobilization.

Conclusions

Our results suggest that decomposing litters could help to sequester N depending on the litter identity and water regime in temperate forest ecosystems.

     

Driving Factors Behind Litter Decomposition and Nutrient Release at Temperate Forest Edges

Forest edges have become important features in landscapes worldwide. Edges are exposed to a different microclimate and higher atmospheric nitrogen (N) deposition compared to forest interiors. It is, however, unclear how microclimate and elevated N deposition affect nutrient cycling at forest edges. We studied litter decomposition and release of N, phosphorus (P), total cations (TC) and C/N ratios during 18 months via the litterbag technique along edge-to-interior transects in two oak (Quercus robur L.) and two pine (Pinus nigra ssp. laricio Maire and ssp. nigra Arnold) stands in Belgium. Furthermore, the roles of edge conditions (microclimate, atmospheric deposition, soil fauna and soil physicochemical conditions), litter quality and edge decomposer community were investigated as underlying driving factors for litter decomposition. Litter of edge and interior was interchanged (focusing on the influence of edge conditions and litter quality) and placed in open-top chamber (OTC), which create an edge (warmer) microclimate. As the decomposer macrofauna was more abundant at the edge than in the interior, the OTCs were used to isolate the effects of warming versus soil fauna. Oak litter at the edge lost 87 and 37% more mass than litter in the interior. We demonstrated an edge effect on litter decomposition and nutrient release, caused by an interplay of edge conditions (atmospheric deposition of N and TC, soil pH and C/N ratio), litter quality and soil fauna. Consequently, edge effects must be accounted for when quantifying ecosystem processes, such as litter decomposition and nutrient cycling in fragmented landscapes.     

Field-based artificial crossings indicate partial compatibility of reciprocal crosses between <Emphasis Type="Italic">Pinus sylvestris</Emphasis> and <Emphasis Type="Italic">Pinus mugo</Emphasis> and unexpected chloroplast DNA inheritance

Crossability relationships between Scots pine (Pinus sylvestris L.) and mountain dwarf pine (Pinus mugo Turra) was studied, using artificial pollination approach. Partial compatibility of the reciprocal crossings of these species was proved experimentally, validating the idea of a spontaneous formation of their hybrid swarms under natural conditions. The hybrids were validated using organellar DNA markers and nuclear DNA microsatellites. Based on the percentage of filled seeds, the interspecific crossings were less efficient than the intraspecific cross-pollinations of P. sylvestris and P. mugo individuals. Both species were found to intercross readily with individuals of their putative hybrid swarm, P. mugo exhibiting a higher hybridological affinity towards putatively hybrid individuals than P. sylvestris. Validation of the hybrids confirmed the paternal inheritance of chloroplast DNA (cpDNA) in the combination P. sylvestris × P. mugo only. Surprisingly, in the reciprocal crossing P. mugo × P. sylvestris, maternal inheritance of cpDNA was revealed. Obtained results offer a new insight into the direction and intensity of gene flow within the hybrid swarms of Scots pine and mountain dwarf pine.     

Spatial genetic structure in seed stands of <Emphasis Type="Italic">Pinus lumholtzii</Emphasis> B.L. Rob. &amp; Fernald in Durango,Mexico

Sad pine is one of the most prominent pine species in Mexico due to its conspicuous pendulous foliage and extreme habitat. However, scientific studies of the species are scarce, and genetic information on sad pine populations is lacking. This endemic tree species occurs naturally on the Sierra Madre Occidental where it covers a total area of about 1,600,000 ha. It typically grows with several species of Quercus and Pinus or in pure stands in uneven-aged forests. Pinus lumholtzii is naturally spatially fragmented, and genetic research on seed and pollen dispersal patterns and spatial genetic structure (SGS)—and the possible implications of these in terms of evolution, conservation and breeding management—is particularly important. Given the fragmented occurrence of the preferred soil type, the goal of this research was to use amplified fragment length polymorphism (AFLP) markers to identify potential differences in spatial genetic structure within and between five P. lumholtzii seed stands at fine and large scales. At the fine scale, we almost always observed non-significant autocorrelation, suggesting that the genetic variants of P. lumholtzii are randomly distributed in space within each sampled seed stand. At the larger scale, our findings provide strong support for the theory of isolation by distance that predicts the expected pattern of SGS at drift–dispersal equilibrium. We recommend a network of P. lumholtzii seed stands of maximum distances of 100 km among stands to prevent greater loss of local genetic variants and use the seeds for reforestations in a radius of maximal 50 km from their proveniences.     

Optimization of Component Yields and Thermal Properties by Organosolv Fractionation of Loblolly Pine (<Emphasis Type="Italic">Pinus taeda</Emphasis>) Using Response Surface Design

Lignin, a low value by-product of biomass fractionation, is of current particular interest for the production of value added materials such as carbon fibers within a biorefinery. Accordingly, we have isolated lignin, hemicellulose, and cellulose by organosolv fractionation of loblolly pine (Pinus taeda) under the influence different fractionation severities (2.50–3.31). A designed experimental matrix targeted maximum lignin and pulp yields and lignin glass transition temperature (T_g) as a function of several process parameters. Optimal fractionation conditions were estimated from an enhanced regression model of the statistically significant variables generated using response surface design (RSD). The most significant factor influencing lignin and pulp yields was solvent composition (p-value <?0.0001). A maximum lignin yield of 94.71 wt% and maximum cellulose yield of 74.96 wt% were determined at combined severities of 3.21 and 2.63, respectively. The lowest T_g of 132.83 °C was found at a combined severity of 2.82.