Do we underestimate the importance of water in cell biology?

Liquid water is a highly versatile material. Although it is formed from the tiniest of molecules, it can shape and control biomolecules. The hydrogen-bonding properties of water are crucial to this versatility, as they allow water to execute an intricate three-dimensional 'ballet', exchanging partners while retaining complex order and enduring effects. Water can generate small active clusters and macroscopic assemblies, which can both transmit information on different scales.     

Do rusty crayfish (Faxonius rusticus) invasions affect water clarity in north temperate lakes?

Limnology - Invasive crayfish can cause shifts in lakes from clear, macrophyte-dominated states to eutrophic, phytoplankton-dominated states because of their burrowing and foraging behavior. While...     

Botanical-geographical and forestry aspects of introgressive hybridization of the Gmelin’s larch (<Emphasis Type=Italic>Larix gmelinii</Emphasis> (Rupr.) Rupr.) and Cajander larch (<Emphasis Type=Italic>L. cajanderi</Emphasis> Mayr)

The paper studies the introgressive hybridization between the Gmelin’s larch and Cajander larch. The obtained data confirm the indisputable specific independence of the Cajander larch, which occupies about 48% of the total area of the larch forests in Russia. Its specific independence has been doubted by some experts. Once again more reliable and vast material shows the presence of wide transitional belt of hybrid populations at the juncture of the hybridizing species. Some forestry characteristics of the Gmelin’s larch and Cajanderi larch are studied that play important role in their natural restoration.     

How do water depth and harvest intensity affect the growth and reproduction of Elodea nuttallii (Planch.) St. John?

Aims Both high and low densities of macrophyte vegetation can impair its ecosystem service function. Harvesting is often applied to macrophyte vegetation to maintain an appropriate density. Vegetation harvesting has occasionally gone awry and caused catastrophes, such as vegetation disappearance and cyanobacterial dominance in waterways and lakes. Because water depth influences macrophyte density at all life stages, the simultaneous influences of harvesting and water depth should be carefully examined. Thus, this study aims to quantify the effects of differently harvesting Elodea nuttallii on its growth and reproduction at different water depths in field experiments.Methods Four harvest intensities (harvesting E. nuttallii plant heights equal to 25%, 50%, 75% and 100% of the water depth) were applied to E. nuttallii growing at four different water depths (60, 90, 120 and 150cm). Plant length and root length were measured. The node number, root number of each plant and number of floating plants were counted before harvesting. The harvested plant were dried to a constant weight for dry weight determination.Important findings The rate of increase in the length and shoot number of E. nuttallii varied from ?0.012 to 0.440 day^-1 and from ?0.020 to 0.639 day^-1, respectively. Water depth>150cm would limit E. nuttallii growth. Elodea nuttallii responded to increasing water depths and low-intensity harvesting by increasing internodal length and decreasing shoot number. The larger internodal length of E. nuttallii observed in relatively deeper water was also induced by the physical strain generated by its buoyancy as its specific gravity was less than water's. The physical mechanism of removing the plant canopy by harvesting decreased E. nuttallii buoyancy and prevented floating. Harvesting increased plant production in shallow waters <90cm deep. Moreover, it is also necessary to perform three medium-intensity harvests at a water depth of 120cm and one low-intensity harvest or no harvesting at a water depth of 150cm to achieve longer lifetimes and less biomass near the water surface when the plants reach or approach the water surface.     

Canopy transpiration and water fluxes in the xylem of the trunk of Larix and Picea trees — a comparison of xylem flow,porometer and cuvette measurements

Summary Leaf gas exchange, transpiration, water potential and xylem water flow measurements were used in order to investigate the daily water balance of intact, naturally growing, adult Larix and Picea trees without major injury. The total daily water use of the tree was very similar when measured as xylem water flow at breast height or at the trunk top below the shade branches, or as canopy transpiration by a porometer or gas exchange chamber at different crown positions. The average canopy transpiration is about 12% lower than the transpiration of a single twig in the sun crown of Larix and Picea. Despite the similarity in daily total water flows there are larger differences in the actual daily course. Transpiration started 2 to 3 h earlier than the xylem water flow and decreased at noon before the maximum xylem water flow was reached, and stopped in the evening 2 to 3 h earlier than the water flow though the stem. The daily course of the xylem water flow was very similar at the trunk base and top below the lowest branches with shade needles. The difference in water efflux from the crown via transpiration and the water influx from the trunk is caused by the use of stored water. The specific capacitance of the crown wood was estimated to be 4.7 x 10^-8 and 6.3 x 10^-8 kg kg^-1 Pa^-1 and the total amount of available water storage was 17.8 and 8.7 kg, which is 24% and 14% of the total daily transpiration in Larix and Picea respectively. Very little water was used from the main tree trunk. With increasing transpiration and use of stored water from wood in the crown, the water potential in the foliage decreases. Plant water status recovers with the decrease of transpiration and the refilling of the water storage sites. The liquid flow conductance in the trunk was 0.45 x 10^-9 and 0.36 x 10^-9 mol m^-2s^-1 Pa^-1 in Larix and Picea respectively. The role of stomata and their control by environmental and internal plant factors is discussed.     

Do lignification and silicification of the cell wall precede silicon deposition in the silica cell of the rice (Oryza sativa L.) leaf epidermis?

Aims

Rice is a well-known silica-accumulating plant. The dumbbell-shaped silica bodies in the silica cells in rice leaf epidermis are formed via biosilicification, but the underlying mechanisms are largely unknown.

Methods

Leaves at different developmental stages were collected to investigate silica cell differentiation by analyzing structures and silicon localization in the silica cells.

Results

Exogenous silicon application increased both shoot and root biomass. When silicon was supplied, silica cells in the leaf epidermis developed gradually into a dumbbell-shape and became increasingly silicified as leaves aged. Silicon deposition in the silica cells was not completed until the leaf was fully expanded. Multiple lines of evidence suggest that lignification of silica cell walls precedes silicon deposition in the lumen of silica cells. The organized needle-like silica microstructures were formed by moulding the inner cell walls and filling up the lumen of the silica cell following leaf maturation.

Conclusions

Two processes were involved in silicon deposition: (1) the silica cell wall was lignified and silicified, and then (2) the silicon was deposited gradually in silica cells as leaves aged. Silica body formation was not completed until the leaf was fully mature.     

Seasonal variation in stable C and N isotope ratios of the Rhone River inputs to the Mediterranean Sea (2004–2005)

The temporal variation in the stable carbon and nitrogen isotope ratios of particulate organic matter (POM) in the Rhone River was investigated on a monthly basis during a 2-year period (2004–2005). In spite of high month-to-month variation, interannually consistent seasonal trends appeared, with significantly lower δ¹³C (<?28.2‰) in spring than in the other seasons. In contrast, δ¹⁵N did not exhibit significant temporal variation. In spring and summer, high chlorophyll a and b concentrations were associated with low C/N values (<8) and a high percentage of organic carbon (%C) and organic nitrogen (%N), testifying to high development of autochthonous riverine phytoplankton (mainly diatoms and chlorophytes). In fall and winter, higher δ¹³C (>?27.2‰) and C/N (>8) values, and lower %C, %N, and chlorophylls concentrations indicated the predominance of allochthonous terrestrial detritus material in the river POM. The lower δ¹³C values recorded in spring–summer, when the phytoplankton biomass was high, were related to the lower carbon isotopic signatures of freshwater diatoms and chlorophytes compared to those of terrestrial plants. Overall, Rhone River POM was mainly composed of terrestrially derived material (90%), with autochthonous phytoplankton representing only 10% as a mean, in spite of a higher mean contribution of phytoplankton (27%) to river POM in summer.     

How consistent are trends in arrival (and departure) dates of migrant birds in the UK?

We examine the first arrival and last departure dates of migrant bird species from, respectively, six and three English area bird reports. Of all 145 bird series, 50% demonstrated significantly earlier arrival in recent years, with the average advance over all species being 0.25 days/year or 12 days earlier over 50 years. Thirty percent of 67 series demonstrated significantly later departure, with the average species delay being 0.16 days/year or eight days later over 50 years. There was greater consistency between species in trends in first arrival than in last departure, with species such as sand martin Riparia riparia significantly earlier at all six sites while, for example, spotted flycatcher Muscicapa striata showed no significant change in arrival at all sites. Significant negative correlations between arrival dates and English temperatures were found for 26% of all series, but temperature effects on departures were less clear. We provide some evidence that trends in arrival dates may be masked by population declines in birds. Since migrant bird populations are in decline generally, this may suggest that the real advance in arrival dates may be greater than that reported here.     

Do lakes feel the burn? Ecological consequences of increasing exposure of lakes to fire in the continental United States

Wildfires are becoming larger and more frequent across much of the United States due to anthropogenic climate change. No studies, however, have assessed fire prevalence in lake watersheds at broad spatial and temporal scales, and thus it is unknown whether wildfires threaten lakes and reservoirs (hereafter, lakes) of the United States. We show that fire activity has increased in lake watersheds across the continental United States from 1984 to 2015, particularly since 2005. Lakes have experienced the greatest fire activity in the western United States, Southern Great Plains, and Florida. Despite over 30 years of increasing fire exposure, fire effects on fresh waters have not been well studied; previous research has generally focused on streams, and most of the limited lake‐fire research has been conducted in boreal landscapes. We therefore propose a conceptual model of how fire may influence the physical, chemical, and biological properties of lake ecosystems by synthesizing the best available science from terrestrial, aquatic, fire, and landscape ecology. This model also highlights emerging research priorities and provides a starting point to help land and lake managers anticipate potential effects of fire on ecosystem services provided by fresh waters and their watersheds.     

The tree-ring chronology of Scots pine (Pinus sylvestris L.) from the Nesvizh castle XVI–XIX cc. in central Belarus

This article presents for the first time Scots pine tree-ring chronology created from historical timber (XVII–XIX cc.) from central Belarus. The chronology includes 59 tree-ring series which were collected from the different wood structures in the Nesvizh castle. This samples show different stages of the castle renovations. The chronology presented in this paper embraces 222 years covering the period between 1608 and 1829.     

Effect of nitrogen load on growth and photosynthesis of seedlings of the hybrid larch F1 (Larix gmelinii var. japonica × L. kaempferi) grown on serpentine soil

We studied the growth and photosynthesis of the hybrid larch F₁ (Larix gmelinii var. japonica × L. kaempferi) grown on serpentine soil and the effects of soil N load, to determine the performance of this species as reforestation material in serpentine regions. We prepared 16 experimental plots (2 m × 4 m each), eight on serpentine and eight on brown forest soil, and planted one-year-old cutting seedlings of the hybrid larch F₁ in each plot, in May 2007. Ammonium sulfate was supplied to half of the plots of each soil type in 2008 and 2009, at a load of 47 kg N ha⁻¹ year⁻¹. Although the growth and photosynthetic capacity of hybrid larch F₁ seedlings in the serpentine soil were limited, the rate of growth in serpentine soil was greater than that of Sakhalin spruce (Picea glehnii) that is dominant species in serpentine regions. There was significant interaction between soil type and N load for the growth and photosynthetic parameters. The N load adversely affected growth and photosynthetic parameters in the serpentine soil, while improved them in brown forest soil. Although the growth rate of hybrid larch F₁ without N loading showed high potential as an afforestation species in serpentine region, increasing deposition of N might be a threat to the growth and photosynthesis of the hybrid larch F₁ in serpentine soil.     

Climatic responses of tree-ring width and δ13C signatures of sessile oak (Quercus petraea Liebl.) on soils with contrasting water supply

We investigated climate–growth relationships (in terms of tree-ring width, basal area increment (BAI), and tree-ring δ¹³C signatures) of Quercus petraea in Central Europe (Luxembourg). Tree responses were assessed for 160 years and compared for sites with contrasting water supply (i.e. Cambisols vs. Regosols with 175 and 42 mm available water capacity, respectively). Oak trees displayed very low climate sensitivity, and climatic variables explained only 24 and 21 % of variance in tree-ring width (TRW) (Cambisol and Regosol sites, respectively). Contrary to our expectations, site-related differences in growth responses (i.e. BAI, δ¹³C signatures) to climate shifts were not significant. This finding suggests a high plasticity of oak trees in the study area. Despite a distinct growth depression found for all trees in the decade 1988–1997 (attributable to increasing annual mean temperatures by 1.1 °C), oak trees completely recovered in subsequent years. This indicates a high resilience of sessile oak to climate change. Shifts in δ¹³C_corr signatures were mainly affected by temperature, and peaks in δ¹³C_corr values (corrected for the anthropogenic increase in atmospheric CO₂) coincided with decadal maximum temperatures. Correlations between δ¹³C signatures and TRW (mainly affected by precipitation) were not significant. This finding suggests that wood growth often was disconnected from carbon assimilation (e.g. due to carbon storage in the trunk or allocation to seeds). Since the selection of drought-resistant tree species gains importance within the context of adaptive forest management strategies, Q. petraea proves to be an adaptive tree species in Central Europe’s forests under shifting climatic conditions.     

Climate during the Eemian in north-central Europe — a critical review of the palaeobotanical and stable isotope data from central Germany

This paper reviews the evidence from terrestrial palaeoenvironmental records in north-central Europe and, in particular, central Germany, which relates to the controversial proposition that there were strong climate oscillations during the last interglacial (oxygen isotope substage 5e). In contrast to the evidence from the GRIP ice core at Summit, Greenland, and a recent palaeoclimate reconstruction based on the pollen profile from Bispingen, Germany, the evaluation of the palaeobotanical and the stable isotope data presented here strongly suggests relatively stable temperature for most of the Eemian and with instability confined to the beginning and end of the interglacial. High amplitude temperature variations can be seen in both the Early Weichselian pollen and isotope records. It is argued that this pattern of climate development is applicable to most of continental north-central Europe.     

Elevated CO2 enhances the growth of hybrid larch F1 (Larix gmelinii var. japonica × L. kaempferi) seedlings and changes its biomass allocation

Key message

Elevated CO ₂ enhances the photosynthesis and growth of hybrid larch F ₁ seedlings. However, elevated CO ₂ -induced change of tree shape may have risk to the other environmental stresses.

Abstract

The hybrid larch F₁ (Larix gmelinii var. japonica × L. kaempferi) is one of the most promising species for timber production as well as absorption of atmospheric CO₂. To assess the ability of this species in the future high CO₂ environment, we investigated the growth and photosynthetic response of hybrid larch F₁ seedlings to elevated CO₂ concentration. Three-year-old seedlings of hybrid larch F₁ were grown on fertile brown forest soil or infertile volcanic ash soil, and exposed to 500 μmol mol^?1 CO₂ in a free-air CO₂ enrichment system located in northern Japan for two growing seasons. Regardless of soil type, the exposure to elevated CO₂ did not affect photosynthetic traits in the first and second growing seasons; a higher net photosynthetic rate was maintained under elevated CO₂. Growth of the seedlings under elevated CO₂ was greater than that under ambient CO₂. We found that elevated CO₂ induced a change in the shape of seedlings: small roots, slender-shaped stems and long-shoots. These results suggest that elevated CO₂ stimulates the growth of hybrid larch F₁, although the change in tree shape may increase the risk of other stresses, such as strong winds, heavy snow, and nutrient deficiency.     

Genetic relationships between European and Siberian larch,Larix spp. (Pinaceae), studied by allozymes. Is the Polish larch a hybrid between these two species?

Thirteen populations ofLarix decidua subsp.decidua and subsp.polonica, and three populations ofL. sibirica were investigated by starch-gel electrophoresis. In the populations assayed 61 alleles at 17 loci were revealed. The allozyme data support the earlier observations about close relationships between these two larch species. Nei's genetic distances betweenL. decidua andL. sibirica were relatively small (D = 0.057), however, almost five times larger, on average, than those between populations of the same species. Results obtained in this study disagree withBobrov's hypothesis about the hybrid origin of the Polish larch and suggest a direct origin from the European larch.     

Water relations of baobab trees (Adansonia spp. L.) during the rainy season: does stem water buffer daily water deficits?

Baobab trees are often cited in the literature as water-storing trees, yet few studies have examined this assumption. We assessed the role of stored water in buffering daily water deficits in two species of baobabs (Adansonia rubrostipa Jum. and H. Perrier and Adansonia za Baill.) in a tropical dry forest in Madagascar. We found no lag in the daily onset of sap flow between the base and the crown of the tree. Some night-time sap flow occurred, but this was more consistent with a pattern of seasonal stem water replenishment than with diurnal usage. Intrinsic capacitance of both leaf and stem tissue (0.07-0.08 and 1.1-1.43 MPa(-1), respectively) was high, yet the amount of water that could be withdrawn before turgor loss was small because midday leaf and stem water potentials (WPs) were near the turgor-loss points. Stomatal conductance was high in the daytime but then declined rapidly, suggesting an embolism-avoidance strategy. Although the xylem of distal branches was relatively vulnerable to cavitation (P50: 1.1-1.7 MPa), tight stomatal control and minimum WPs near--1.0 MPa maintained native embolism levels at 30-65%. Stem morphology and anatomy restrict water movement between storage tissues and the conductive pathway, making stored-water usage more appropriate to longer-term water deficits than as a buffer against daily water deficits.     

Determining the appropriate pretreatment procedures and the utility of liver tissue for bulk stable isotope (δ13C and δ15N) studies in sharks

Stable-isotope analysis (SIA) provides a valuable tool to address complex questions pertaining to elasmobranch ecology. Liver, a metabolically active, high turnover tissue (~166 days for 95% turnover), has the potential to reveal novel insights into recent feeding/movement behaviours of this diverse group. To date, limited work has used this tissue, but ecological application of SIA in liver requires consideration of tissue preparation techniques given the potential for high concentrations of urea and lipid that could bias δ¹³C and δ¹⁵N values (i.e., result in artificially lower δ¹³C and δ¹⁵N values). Here we investigated the effectiveness of (a) deionized water washing (WW) for urea removal from liver tissue and (b) chloroform-methanol for extraction of lipids from this lipid rich tissue. We then (a) established C:N thresholds for deriving ecologically relevant liver isotopic values given complications of removing all lipid and (b) undertook a preliminary comparison of δ¹³C values between tissue pairs (muscle and liver) to test if observed isotopic differences correlated with known movement behaviour. Tests were conducted on four large shark species: the dusky (DUS, Carcharhinus obscurus), sand tiger (RAG, Carcharias taurus), scalloped hammerhead (SCA, Sphyrna lewini) and white shark (GRE, Carcharodon carcharias). There was no significant difference in δ¹⁵N values between lipid-extracted (LE) liver and lipid-extracted/water washed (WW) treatments, however, WW resulted in significant increases in %N, δ¹³C and %C. Following lipid extraction (repeated three times), some samples were still biased by lipids. Our species-specific “C:N thresholds” provide a method to derive ecologically viable isotope data given the complexities of this lipid rich tissue (C:N thresholds of 4.0, 3.6, 4.7 and 3.9 for DUS, RAG, SCA and GRE liver_LEWW tissue, respectively). The preliminary comparison of C:N threshold corrected liver and muscle δ¹³C values corresponded with movement/habitat behaviours for each shark; minor differences in δ¹³C values were observed for known regional movements of DUS and RAG (δ¹³C_Diffs = 0.24 ± 0.99‰ and 0.57 ± 0.38‰, respectively), while SCA and GRE showed greater differences (1.24 ± 0.63‰ and 1.08 ± 0.71‰, respectively) correlated to large-scale movements between temperate/tropical and pelagic/coastal environments. These data provide an approach for the successful application of liver δ¹³C and δ¹⁵N values to examine elasmobranch ecology.