Presence and oxidation of amino acids in rhizosphere and non-rhizosphere soil

Manometric studies were carried out on the respiratory activity of different rhizosphere and non-rhizosphere soils to follow quantitatively the over-all microbial activity in the rhizosphere soil as affected by the species and growth phase of plant. Oxygen consumption was distinctly greater in rhizosphere soils as compared to that in non-rhizosphere soils. The difference between oxygen consumption by rhizosphere and non-rhizosphere soils changed with the course of plant growth and it was not the same in different plants. This difference in oxygen consumption might be a measure of the amount of available oxidizable substrate in the rhizosphere. A rhizosphere sample had greater diversity as well as higher concentration of free amino acids than a non-rhizosphere sample of the same soil. Bacterial counts pointed to preferential stimulation in the rhizosphere of bacteria requiring individual amino acids. amino acids, such as glycine, alanine, asparsic acid of tyrosine were oxidized more rapidly in rhizosphere than in non-rhizosphere soil, but the extsent of oxidation for each of the amino acids studied did not differ. The amount of oxygen consumed during oxidation of alanine, aspartic acid or tyrosine was about one-half of the total amount necessary for complete oxidation. With glycine a higher extent of oxidation (60%) was observed. These extents of oxidation of glycine and aspartic acid did not change on investigation at two different phases of plant growth.     

Respiration and microflora of the rhizosphere soil of wheat influenced by foliar application of urea

The numbers of micromycetes and bacteria were investigated with respect to oxygen consumption in the rhizosphere soil of wheat and in non-rhizosphere soil. Plants after foliar application of urea (2 % solution) and non-treated plants were cultivated in degraded chernozem and garden soil in a green-house. Changes in oxygen consumption by the suspensions of rhizosphere and non-rhizosphere soils corresponded to changes in the number of bacteria designated as the rhizosphere effect (R/S). Values of R/S depended on the presence of organic substrates. Changes in oxygen consumption by the soil suspension from the rhizosphere of wheat occurring due to foliar application of urea corresponded to changes in the amount of microflora. The results obtained are discussed with respect to a possible utilization of the data to follow metabolic activity of soils in a natural environment (in situ) determined according to oxygen consumption by a soil suspension, and to assess changes in the microflora of rhizosphere and non-rhizosphere soil.     

The oxidation of pipecolic acid in preincubated soils

Chernozem soil was preincubated with 0.1% glucose, glucose plus ammonium nitrate, hydrolyzed casein or amino acids for five days and with 1% wheat straw, pectin, peptone or cellulose for ten days. The soil was modified by this treatment so that the pipecolic acid was oxidized in two steps, as was shown by two peaks on the graphic plot of the oxygen uptake. In the control soil sample preincubated with water, the oxygen consumption curve formed one peak. In brown soil it was necessary to increase the concentration of glucose and hydrolyzed casein to 1% to obtain the oxidation of pipecolic acid in two phasos. Approximately a third of the oxygen for the complete oxidation of pipecolic acid was consumed in the first phase of oxidation, another third in the second phase of oxidation. A relation was found between the occurrence of the second period of oxidation of pipecolic acid and the amount of organic carbon in the soil.     

宁南山区典型植物根际与非根际土壤微生物功能多样性

选择宁南山区9种典型植物的根际与非根际土壤为研究对象,采用Biolog方法对土壤微生物功能多样性进行了研究。结果表明:9种不同植物根际土壤与非根际土壤的微生物活性(AWCD)、微生物多样性指数和微生物均匀度指数均存在明显差异;除冰草外,其他各种植物的根际土壤的微生物活性AWCD、微生物多样性指数和微生物均匀度指数均比非根际土壤的高;9种典型植物根际土壤微生物主要碳源利用类型是羧酸类和氨基酸类,非根际土壤微生物主要碳源利用类型是羧酸类、胺类、氨基酸类;微生物活性、微生物多样性指数和微生物均匀度指数两两之间均达到了极显著相关,与土壤化学性质各指标之间均未达到显著相关水平。     

荒漠草原区土壤粒径组成对柠条根际土壤微生物数量及酶活性的影响

柠条(Caragana korshinskii)是荒漠草原区主要的造林绿化树种,研究其根际土壤微生物和酶活性与不同土壤类型土壤粒径组成的关系有重要意义,然而土壤粒径对荒漠草原柠条根际土壤微生物数量和酶活性的影响知之甚少,探讨土壤颗粒组分与微生物数量、土壤酶活性之间的关系,以及土壤颗粒组成对荒漠草原区固沙灌木植物柠条根际土壤微生物数量及酶活性的影响,可为揭示荒漠草原土壤退化及生态修复提供参考。以宁夏荒漠草原区土壤粒径组成差异显著的灰钙土、红黏土、风沙土环境下栽植的柠条为研究对象,研究不同土壤颗粒组成对根际土壤微生物数量及酶活性的相互关系与影响。结果表明:土壤微生物的数量表现为细菌放线菌真菌。根际土壤中的细菌、真菌数量显著高于非根际,且在3种不同类型的土壤中随着细砂粒的增多,真菌和放线菌数量逐渐降低,而细菌数量呈先增大后减小的趋势;根际与非根际土壤的蔗糖酶、碱性磷酸酶及过氧化氢酶活性均呈现出灰钙土红黏土风沙土的趋势,红黏土根际土壤中的脲酶活性显著高于灰钙土与风沙土;除过氧化氢酶外,土壤酶活性表现为根际高于非根际,在3种不同类型的土壤中随着细砂含量的增加,土壤酶活性均呈递减趋势。土壤颗粒组成与微生物数量之间没有明显的相关性,而与土壤酶活性之间显著相关,土壤酶活性与黏粒、粉粒呈正相关,与细砂、中砂呈负相关关系,根际土壤中酶活性更高,能够为植物及微生物提供更多的营养。     

种植转Bt基因棉土壤中Bt蛋白的分布

采用盆栽试验结合酶联免疫法(ELISA)测定了转Bt基因抗虫棉及常规棉花不同生育期根际及非根际土壤中的Bt蛋白含量.结果表明:红壤、黄棕壤及黄褐土种植转Bt基因棉花后根际土中Bt蛋白含量显著高于非根际土,而种植常规棉花的根际土与非根际土中Bt蛋白含量差异不显著.在初蕾期转Bt基因棉根际土中的Bt蛋白含量为黄褐土＞黄棕壤＞红壤,分别为常规棉根际土的144%、121%和238%;而在盛花期为黄棕壤＞黄褐土＞红壤,分别为常规棉根际土的156%、116%和197%.无论种植转Bt基因棉还是常规棉,供试土壤的根际和非根际土中Bt蛋白含量都随棉花生育期的推进先增加后减少,在盛花期达最大值.整个生育期内,转Bt基因棉根际土中的Bt蛋白含量大于其非根际土;种植转Bt基因棉土壤中Bt蛋白含量高于常规棉,说明转Bt基因棉花的Bt蛋白可释放到根际土中.     

内蒙古草原典型植物对土壤微生物群落的影响

为了分析内蒙古草原不同植物物种对土壤微生物群落的影响, 采用实时荧光定量PCR (real-time PCR)以及末端限制性片段长度多态性分析(terminal restriction fragment length polymorphism, T-RFLP)等分子生物学技术, 测定了退化-恢复样地上几种典型植物的根际土壤和非根际土壤中细菌和真菌的数量及群落结构。结果表明, 不同植物物种对根际和非根际细菌及根际真菌数量均有显著影响。根际土壤中的细菌和真菌数量普遍高于非根际土壤, 尤其以真菌更为明显。对T-RFLP数据进行多响应置换过程(multi-response permutation procedures, MRPP)分析和主成分分析(principal component analysis, PCA), 结果表明, 大多数物种的根际细菌及真菌的群落结构与非根际有明显差异, 并且所有物种的真菌群落可以按根际和非根际明显分为两大类群。此外, 细菌和真菌群落结构在一定程度上存在按物种聚类的现象, 以细菌较为明显。这些结果揭示了不同植物对土壤微生物群落的影响特征, 对理解内蒙古草原地区退化及恢复过程中植被演替引起的土壤性质和功能的变化有一定的帮助。     

西宁南山4种灌木根际和非根际土壤微生物、酶活性和养分特征

西宁南山区植被退化情况严重,人工造林植被恢复被看作是最有效的恢复手段,其中选择合适造林树种尤为关键。选择人工种植的唐古特白刺Nitraria tangutorum、柠条Caragana korshinskii、西北小蘗Berberis vernae和短叶锦鸡儿Caragana brevifolia共4种灌木树种造林试验区为研究对象,通过测定根际和非根际土壤微生物数量、酶活性及养分含量,综合比较种植4种灌木树种根际和非根际土壤肥力差异,科学评价其对土壤的改善效果。研究表明:(1)土壤微生物数量和酶活性总体呈现出根际高于非根际的规律,仅放线菌数量和脲酶活性出现了根际低于非根际现象。(2)土壤养分方面,4种灌木根际土壤和非根际土壤p H值、全N、全P、全K含量差异不显著,有机质、有效P、速效K含量均呈现出根际非根际,而碱解N则是根际非根际。(3)土壤酶活性与土壤微生物数量相关性不显著,土壤有机质含量与土壤细菌、真菌数量呈极显著正相关,有效P含量与土壤细菌、真菌和放线菌数量呈极显著正相关,速效K含量与过氧化氢酶、酸性磷酸酶活性呈显著正相关,全N、碱解N含量均与脲酶活性呈显著正相关。(4)从土壤肥力综合水平来看,根际非根际,其中根际土壤中西北小蘗柠条短叶锦鸡儿唐古特白刺,研究结果表明西北小蘗和柠条能大幅提高土壤肥力,改良土壤效果较好。     

独山子区优势草本植物根际与非根际土壤微生物功能多样性

以独山子区3种优势草本植物的根际与非根际土壤为研究对象,采用Biolog-ECO微平板法对土壤微生物功能多样性进行了研究。结果表明:3种不同植物根际与非根际土壤微生物代谢活性(AWCD)、丰富度指数Shannon(H)和均匀度指数Mc Intosh(U)均存在不同差异,且博乐蒿根际土壤微生物功能多样性均优于非根际土壤及其他两种植物;根际土壤微生物对糖类、脂类、酸类和胺类碳源物质比较敏感,非根际土壤微生物敏感于酸类、氨基酸类以及糖类碳源,根际土壤微生物对碳源的利用能力更强,且不同植物根际环境微生物碳源利用特征不同;微生物活性、丰富度指数和微生物均匀度指数与土壤pH值、SOM、AP和NO-3-N存在显著正相关(P0.05);博乐蒿根际土壤养分含量与微生物活性均较高,对环境的适应性更强,在独山子区生态环境管理与建设中可对其进行关注。     

植物种类对野芷湖湖岸带土壤反硝化作用的影响

反硝化作用是湖岸带有效去除氮素的关键氮循环过程,受到植物、土壤理化性质及微生物等因素的影响。为探究湖岸带不同植物对土壤反硝化作用的影响,通过调查测定野芷湖湖岸带9种常见植物的根际与非根际土壤的反硝化功能基因丰度和反硝化潜势,分析其与土壤理化性质的关系,阐明植物种类影响反硝化作用的机制。研究结果表明:(1)种植植物会改变湖岸带土壤的理化指标,植物根际土的硝态氮(NN)、铵态氮(AN)、总碳(TC)、总氮(TN)和可溶性有机碳(DOC)含量等显著高于非根际土,其中柳树、黄素馨、喜旱莲子草根际土的TC、DOC、TN、NN显著高于其他物种,桂树的根际和非根际土的pH均显著低于其他物种;(2)植物根际土的微生物反硝化功能基因(narG、napA、nirS、nirK和nosZ)丰度显著高于非根际土,其中柳树、黄素馨、喜旱莲子草根际土的基因丰度显著高于其他物种, pH、TN、NN和DOC等对反硝化功能基因丰度影响较大;(3)根际土的反硝化潜势显著高于非根际土,其中柳树、桂树、黄素馨根际土的反硝化潜势显著高于其他物种,黄素馨非根际土的反硝化潜势也较高,pH、DOC、TN以及napA、nirS、norB基因丰度等对土壤的反硝化潜势具有显著影响。本研究说明植物根际微环境更有利于反硝化微生物的生长与繁殖,湖岸带种植植物时可考虑不同的常绿和落叶乔木、灌木、草本植物的合理配置来提高湖岸带的氮素截留能力,以减少由过量氮素进入水生生态系统导致的面源污染。     

人工与天然云杉林土壤真菌群落多样性及菌群网络关系特征

土壤真菌群落多样性和菌群关系是维持生态系统的多样性及稳定性的关键.本文以粗枝云杉人工林和天然林为研究对象,利用高通量测序技术和生物信息学分析方法,研究了云杉根际和非根际土壤真菌群落组成、多样性及菌群网络关系.结果 表明:从群落组成上看,人工林中相对丰度最高的科是丝盖伞科,而天然林中是蜡壳耳科,两处林型下占比最高的属均为...     

Arsenic in the rhizosphere soil solution of ferns

The aim of this study was to explore the evidence of arsenic hyperaccumulation in plant rhizosphere solutions. Six common fern plants were selected and grown in three types of substrate: arsenic (As) -tailings, As-spiked soil, and soil-As-tailing composites. A rhizobox was designed with an in-situ collection of soil solutions to analyze changes in the As concentration and valence as well as the pH, dissolved organic carbon (DOC) and total nitrogen (TN). Arsenite composed less than 20% of the total As, and As depletion was consistent with N depletion in the rhizosphere solutions of the various treatments. The As concentrations in the rhizosphere and non-rhizosphere solutions in the presence of plants were lower than in the respective controls without plants, except for in the As-spiked soils. The DOC concentrations were invariably higher in the rhizosphere versus non-rhizosphere solutions from the various plants; however, no significant increase in the DOC content was observed in Pteris vittata, in which only a slight decrease in pH appeared in the rhizosphere compared to non-rhizosphere solutions. The results showed that As reduction by plant roots was limited, acidification-induced solubilization was not the mechanism for As hyperaccumulation.     

烤烟根系分泌物中单糖的组分含量及其相关分析

以4个不同烤烟品种为研究材料,采用盆栽试验,运用高效毛细管区带电泳法测定各品种根际土、非根际土、根系及叶片中的单糖组分及含量,并分析其相关关系,探究根系分泌物中糖类的分泌特性。结果表明：在各样品中,共检出木糖、葡萄糖、半乳糖、核糖、阿拉伯糖和鼠李糖6种糖;不同品种根际土、非根际土、根系及叶片中检出的糖组分及含量均存在差异;同一品种中,叶片最高,根系次之,根际土和非根际土最低;相关性分析表明,木糖、阿拉伯糖、葡萄糖、鼠李糖和半乳糖总量在根际土、非根际土、叶片和根系间呈正相关关系,各单糖组分间均呈正相关关系,部分组分呈显著或极显著相关关系。研究表明,不同烤烟品种根系分泌这些单糖存在品种差异,且根系分泌单糖可能是一个沿浓度梯度的扩散过程。     

Rhizosphere and non-rhizosphere bacterial community composition of the wild medicinal plant <Emphasis Type="Italic">Rumex patientia</Emphasis>

To investigate bacterial communities between rhizosphere and non-rhizosphere soils of the wild medicinal plant Rumex patientia of Jilin, China, small subunit rRNAs (16S rDNA) from soil metagenome were amplified by polymerase chain reaction using primers specific to the domain bacteria and analysed by cloning and sequencing. The relative proportion of bacterial communities in rhizosphere soils was similar to non-rhizosphere soils in five phylogenetic groups (Proteobacteria, Actinobacteria, Acidobacteria, Chloroflexi and Planctomycetes). But there were differences in five other phylogenetic groups (Firmicutes, Bacteroidetes, Gemmatimonadetes, Verrucomicrobia and Unclassified bacteria). Over 97.24 % of the sequenced clones were found to be unique to rhizosphere and non-rhizosphere soils, while 2.76 % were shared by both of them. Our results indicate that there are differences in the composition and proportion of bacterial communities between rhizosphere and non-rhizosphere soils. Furthermore, the unique bacterial clones between rhizosphere and non-rhizosphere soils of the wild medicinal plant R. patientia have obvious differences.     

高寒草甸根际土壤化学计量特征对草地退化的响应

为深入理解高寒草甸退化过程中根际和非根际土壤中碳(C)、氮(N)和磷(P)的化学计量特征和土壤养分的变化规律,并获得退化草地土壤养分和微生物养分限制的信息,本研究以祁连山东缘4个不同退化程度高寒草甸为对象,通过采集优势植物根际土(0~2 mm)和非根际土(0~10 cm)的土壤样品,分析了土壤C、N、P浓度和比例,土壤中可提取的C、N、P(Ext-C、Ext-N、Ext-P)的浓度和比例,参与C、N、P循环的胞外酶(β-1,4-葡萄糖苷酶、N-乙酰-β-D-葡萄糖苷酶、亮氨酸基肽酶、酸性磷酸酶)的活性和比例,以及土壤微生物生物量碳、氮、磷(MBC、MBN、MBP)的含量及比例.结果表明: 高寒草甸退化过程中优势植物根际养分含量高于非根际养分.随着高寒草甸退化程度的加剧,其土壤的C∶N∶P发生重大改变,表现出C∶N的严重失调,表明草地退化程度越高受到N的限制越严重.不同退化程度的高寒草甸中,经过对数转化的根际C-、N-和P-胞外酶的比例均偏离了在全球生态系统分析中获得的1∶1∶1比例,表明高寒草甸退化主要受到强烈的N限制,P次之.高寒草甸地区土壤全量养分含量较高,土壤中的速效养分较低,成为阻碍牧草生长的限制因子.     

Production of organic acids by soil micro-organisms

Summary Micro-organisms of the rhizosphere soils in respect of four plant speciesviz sesbania, cowpea, sorghum, and finger millet and those of the non-rhizosphere soil (control) maintained under pot culture conditions were incubated for a fortnight in liquid media containing glucose and the relative amounts and nature of the organic acids produced were investigated by pH changes and chromatographic studies respectively. Micro-organisms with the rhizosphere of all the four plant species produced greater amounts of acids than those of the non-rhizosphere soil. Rhizosphere micro-organisms with legumes produced greater amounts of acids than those with non-legumes. However no qualitative differences were observed in the organic acids produced by the rhizosphere micro-organisms of the four plant species investigated as well as those of non-rhizosphere soil.     

三种土壤条件下紫茎泽兰根际的酶活性及细菌群落状况

紫茎泽兰被列为我国危害最严重的外侵植物,为探索其侵入机制,以四川省凉山州的3种主要土壤?红壤、黄壤和紫色土为研究对象,比较了根际和非根际土壤(距离根系约20 cm)的酶活性及细菌群落。结果表明,尽管土壤类型不同,根际酶活性(过氧化氢酶、酸性磷酸酶、脲酶和蔗糖酶)及微生物量碳氮显著高于非根际,说明紫茎泽兰的根系生命活动促进根际微生物生长繁殖,数量增加,活性增强,有益于土壤养分供应,促进紫茎泽兰生长,提高生存竞争优势。在不同类型的土壤中,紫茎泽兰根际细菌的分类单元数和主成分方差比非根际降低或无显著变化,说明紫茎泽兰对土壤细菌群落的影响因土壤而异。3种土壤的优势菌株种类差异极大,根际20种优势细菌中仅链霉菌1(Streptomyces1)为共有菌株,非根际仅有绿弯菌(Chloroflexi KD4-96)为共有菌株,说明紫茎泽兰能在细菌群落不同的土壤上生长,具有极强的适应性。但是,3种土壤的优势细菌均为放线菌门、变形菌门和拟杆菌门,合计占细菌总量的60.69%—78.75%;就同一种土壤而言,根际20种优势细菌中有8—11株与非根际相同。因此,土壤类型是决定细菌群落的主要因素,但因紫茎泽兰入侵而发生一定程度的变化。     

毛竹根际与非根际土壤重金属、理化性质及酶活性特征

于2014年2月至2015年1月在浙江省衢州市铅锌矿附近毛竹林地采集土样,对土壤重金属含量、pH以及土壤酶活性等的动态变化特征进行了研究。结果表明:根际土与非根际土的p H在1a中变化均不明显,且变化范围都处在4.50—4.85之间;非根际土的土壤含水率大于根际土,两者的变化幅度较大,最低值均出现在6月和10月;根际土中Zn和Cd的有效态含量远高于非根际土,而Pb的有效态含量则表现出非根际土大于根际土的特点;过氧化氢酶、磷酸酶、脲酶和脱氢酶在根际土中的活性明显高于非根际土;从土壤重金属有效态与土壤酶活性相关性来看,根际土中,除有效态Pb与过氧化氢酶呈显著负相关外,其余重金属元素有效态与土壤酶活性相关性均没有显著相关性,而在非根际土壤中,有效态Cd与过氧化氢酶呈极显著负相关,与脲酶呈显著负相关,Zn和Cd则与土壤酶活性之间没有显著相关性。综合研究结果表明,毛竹根际土壤质量总体上明显优于非根际土,这为毛竹今后作为植物修复的材料提供了一定的理论依据。     

磷高效转基因大豆对根际微生物群落的影响

旨在了解转拟南芥紫色酸性磷酸酶基因的磷高效转基因大豆AP15-1的种植对土壤微生物生态的影响。于春秋两季在网室种植转基因大豆AP15-1及其受体YC03-3,在大豆幼苗期、盛花期和成熟期,分别采集根际土和非根际土。平板菌落计数的实验结果显示:AP15-1和YC03-3根际土与非根际土中可培养细菌、真菌和放线菌的数量在不同的季节和不同的生长期是会发生一定的变化,但没有明显的规律;两者根际土间及根际与非根际土间,细菌、真菌和放线菌数量没有明显的差异。BIOLOG生态板实验对碳源代谢特征分析结果显示:同季AP15-1和YC03-3根际土中微生物总体代谢活性要强于非根际土,但AP15-1和YC03-3根际土间及根际与非根际土间,微生物碳代谢活性差异均不显著;并且AP15-1与YC03-3根际土微生物对四大类碳源的代谢也没有明显的偏好。对春秋季成熟期的BIOLOG数据进行生态学丰富度与多样性指数计算分析,也未发现AP15-1和YC03-3根际土及非根际土间存在显著性差异。主成份和聚类分析结果显示:相同季节和相同生长期,AP15-1和YC03-3根际间的差异小于根际与非根际间的差异;季节和大豆生长时期对根际微生物群落造成的影响要大于AP15-1与YC03-3个体差异所产生的影响。研究结果表明转酸性磷酸酶基因的磷高效转基因大豆种植对根际土壤可培养微生物的数量和群落结构没有产生显著的影响。     

Transfer of plasmid RP4 between pseudomonads after introduction into soil; influence of spatial and temporal aspects of inoculation

Abstract Transfer of plasmid RP4 between introduced strains of Pseudomonas fluorescens was studied in 2 soils, Ede loamy sand and Guelph loam, in non-rhizosphere and rhizosphere soil using soil chambers and microcosm systems. Short-term organism survival was generally at high levels (> 10⁶/g dry soil), in both soils, whereas long-term survival was poorer, particularly in the loamy sand. Amendment of this soil with bentonite clay improved bacterial survival. Plasmid transfer between donor and recipient strains freshly introduced into separate portions of Ede loamy sand, which were subsequently mixed, was only detected in the vicinity of growing wheat roots, suggesting roots stimulate bacterial migration and/or growth. However, no transfer was detected between resident donor and recipient cell populations (introduced 48 days previously), due to poor organism survival. Plasmid transfer was detected in the rhizosphere between established, resident donor cell populations, and newly-introduced recipients, and vice-versa, in both soils. These data suggested that plant roots enhance the frequency of bacterial matings not only between organisms present in the same niches, but also between organisms from different niches, or in different conditions of stress, probably by stimulating bacterial migration and/or growth, or by providing additional surfaces for cell-to-cell contact.