Longevity and survival of the black stork Ciconia nigra based on ring recoveries

To understand population dynamics, the determination of survival rates is very important. For the black stork Ciconia nigra no survival rate determination has been published to date. This might be due to the fact that ringing activity and recovery numbers in general are still relatively low for the species. The international black stork colour ringing programme is taking place with the participation of 25 countries including Hungary. Altogether more than 7,000 black storks have been colour ringed worldwide, of which 1,069 individuals were marked in Hungary. This article’s objective is the determination of the survival rates for the black stork, as well as to estimate the longevity of the species based on live encounters of ringed individuals. The conclusions are that longevity can be estimated based on the data, and is in agreement with previous knowledge; and that the survival rate of the species, with our present knowledge, shows a significant difference between first year (0.1696, 0.1297–0.219) and older birds (0.838, 0.773–0.887).     

Evidence for density-dependent habitat occupancy at varying scales in an expanding bird population

Understanding factors shaping the spatial distribution of animals is crucial for the conservation and management of wildlife species. However, few studies have investigated density-dependent habitat selection in wild populations in non-equilibrium conditions and at varying spatial scales. Here, we investigated density-dependent habitat selection at varying spatial scales in an increasing white stork Ciconia ciconia population using a long term data set in western France. During a 16-year study period, the breeding population density increased from 0.66 nests per 100 km² to 6.6 nests per 100 km². At the beginning of the colonisation of the area settlement probability of storks was mainly positively affected by grasslands located near wetlands. Areas with intensive or moderately intensive agriculture were extremely unlikely to be occupied by breeding birds. However, selection for the initially preferred habitats faded as stork density increased although the proportions of habitat types remained unchanged. At the same time selection for initially less favoured habitats had increased. Moreover, we found that the spatial scale of selection for each foraging habitat variable was consistent over time. Our results suggest that snapshot analyses of resource selection in populations at high density may be misleading for population conservation or management. In contrast, a longitudinal approach to resource selection can be a valuable tool for understanding resource limitation.     

Very Low Population Structure in a Highly Mobile and Wide-Ranging Endangered Bird Species

The loss of biodiversity following fragmentation and degradation of habitat is a major issue in conservation biology. As competition for resources increases following habitat loss and fragmentation, severe population declines may occur even in common, highly mobile species; such demographic decline may cause changes within the population structure of the species. The regent honeyeater, Anthochaera phrygia, is a highly nomadic woodland bird once common in its native southeast Australia. It has experienced a sharp decline in abundance since the late 1970s, following clearing of large areas of its preferred habitat, box-ironbark woodland, within the last 200 years. A captive breeding program has been established as part of efforts to restore this species. This study used genetic data to examine the range-wide population structure of regent honeyeaters, including spatial structure, its change through time, sex differences in philopatry and mobility, and genetic differences between the captive and wild populations. There was low genetic differentiation between birds captured in different geographic areas. Despite the recent demographic decline, low spatial structure appears to have some temporal consistency. Both sexes appear to be highly mobile, and there does not seem to be significant genetic differentiation between the captive and wild populations. We conclude that management efforts for survival of this species, including habitat protection, restoration, and release of captive-bred birds into the wild, can treat the species as effectively a single genetic population.     

The first observation of obligate saproxylic chafer larvae inside white stork <Emphasis Type="Italic">Ciconia ciconia</Emphasis> nest

The white stork Ciconia ciconia nest, with its impressive size of over 1.5 m in height, a diameter of over 1.5 m and weight exceeding a ton, belongs the largest and heaviest structures built by birds all over the world. This permanent construction which is made of long sticks laid in layers and the thick lining consisting of hay, straw, manure, rubbish and rags, could last for decades. During that time, it can be an attractive shelter and breeding site for many organisms, including small birds, mammals and arthropods. However, due to some methodological constraints, the role of such nests for the diversity of saproxylic insects has not been well recognized so far. Here we report the first observation of occurrence of larvae of obligate saproxylic marbled rose-chafer, Protaetia lugubris (Cetoniinae) inside the white stork nest. We further discuss that the interior of a long-term stork nest may be an alternative to interiors of tree hollows in which typically most chafer’s larvae develop. Thus, white stork nest could provide supplementary habitat for saproxylic beetles of conservation interests.     

Survival in a long-lived territorial migrant: effects of life-history traits and ecological conditions in wintering and breeding areas

Despite its key role in population dynamics and evolutionary ecology, little is known about factors shaping survival in long‐lived territorial species. Here, we assessed several hypotheses that might explain variability in survival in a migratory Spanish population of a long‐lived territorial species, the Egyptian vulture Neophron percnopterus, using a 16‐year monitoring period and live‐encounter histories of 835 individually marked birds. Cormack‐Jolly‐Seber capture–recapture models showed no evidence for effects of sex or nestling body condition on survival. However, the normalized difference vegetation index (NDVI; an indicator of primary productivity) of natal territories had positive effects on juvenile survival, indicating that environmental conditions experienced early in life can determine survival prospects. Survival increased with age (0.73±0.02 in the first 2 years to 0.78±0.03 in years 3 and 4) to later decrease when birds were five years old (0.60±0.05), the age at which they acquire the adult plumage, abandon the communal lifestyle of juveniles, and may look for a breeding territory. At older ages, survival was higher for non‐breeding (0.75±0.02) and breeding adults (0.83±0.02). Among the latter, birds that recruited into better territories had higher survival prospects. Age‐specific variation in survival in this species may be related to behavioural changes linked to dispersal and recruitment into the breeding population, while survival prospects of adult birds strongly depend on breeding territory selection. These results suggest a tradeoff between recruiting soon, and thus reducing mortality costs of a long and extensive dispersal period, and trying to recruit into a good quality territory. Finally, annual survival rates for birds of all age classes were positively related with the NDVI in their African wintering grounds. Although this relationship was probably mediated by food availability, further research is needed to properly identify the limiting factors that are affecting trans‐Saharan migrants, especially in light of global climate change.     

中国两栖类种群生态研究概述

两栖类种群生态学研究从深度和广度上看,均无法与哺乳类和鸟类的相比。然而与哺乳类和鸟类一样,随着生态环境的恶化和生态空间的减少,两栖类各物种种群面临巨大的生存压力,甚至濒临灭绝;因此,广泛深入地开展两栖类种群生态学研究,探讨两栖类与外界环境之间的关系,对环境监测和对两栖类种群的保护与利用均有较大的现实意义和理论意义。为此,重点从两栖类的种群结构与动态规律,摄食行为与食性,怕分析与通讯联系,繁殖过程和繁殖习性,越冬准备和冬眠适应,以及两栖类种群数量下降等方面,对中国研究者的工作进行综述,试图阐述研究现状,存在问题,并分析了尚待加强研究的方面和今后的发展趋势。     

朱■（Nipponianippon）种群生存力分析

到目前为止,只有一个野生朱群体幸存下来,而且它的种群大小自１９８１年重新发现以来,一直在２０只以下波动。本文应用种群生存力分析的方法,借助漩涡模型,根据朱１４年的种群数据,总结和预测了其种群动态,并着重研究了朱的濒危程度。结果显示,按过去１０余年的生存状况,朱在５０年内绝灭的可能性是９８．５％,平均绝灭时间为１５．７２年。现存种群数量很低,所以种群统计随机性对其命运有很大影响。灵敏度分析表明,当前的朱种群对意外死亡和生存环境的波动较为敏感。保护工作的优先项目是对猎杀和天敌的控制以及从各个方面提高朱的生活质量     

朱鹮(Nipponia nippon)种群生存力分析

到目前为止,只有一个野生朱鹮群体幸存下来,而且它的种群大小自1981年重新发现以来,一直在20只以下波动。本文应用种群生存力分析的方法,借助漩涡模型,根据朱鹮14年的种群数据,总结和预测了其种群动态,并着重研究了朱鹮的濒危程度。结果显示,按过去10余年的生存状况,朱鹮在50年内绝灭的可能性是98.5%,平均绝灭时间为15.72 年。现存种群数量很低,所以种群统计随机性对其命运有很大影响。灵敏度分析表明,当前的朱鹮种群对意外死亡和生存环境的波动较为敏感。保护工作的优先项目是对猎杀和天敌的控制以及从各个方面提高朱鹮的生活质量。     

Uphill shifts in the distribution of the white stork Ciconia ciconia in southern Poland: the importance of nest quality

The aim of this paper is to explain the altitudinal changes that have occurred during the 20th century to the white stork distribution in the Podhale region of the uplands of the Tatra mountains, southern Poland. We analysed both historical data from the white stork censuses and detailed yearly records from 1974 to 2003 on population size, distribution and breeding success. A white stork nest was first recorded at Podhale in 1931 and numbers increased to seven nests in 1933, all located below 650 m altitude. During the 30‐years, 1974–2003, both the maximum and upper‐quartile altitudes of nests increased significantly. In 1974 the highest nest was at an altitude of 770 m, and the maximum reached 890 m in 1999. In the same period, the breeding population increased significantly. The minimum and lower‐quartile altitudes of nests decreased significantly following initial occupation of suitable lower altitude sites before uphill expansion. We noted the positive association between nest occupancy over the study period and breeding performance. As a result, long‐occupied nests contributed most of the young produced in the population and chicks from these nests probably colonized new areas. We believe this is the first well‐documented evidence of, and mechanism for, a particular bird species to ascend to higher elevations and that the altitudinal shifts reported for butterflies, plants and whole biomes can be detected in birds as well.     

Value of a broken umbrella: abandoned nest sites of the black stork (Ciconia nigra) host rich biodiversity

Protecting habitats for charismatic vertebrates can provide an ‘umbrella’ for less conspicuous organisms, especially when these are threatened by the same processes. However, such a conservation scheme is vulnerable to the extirpation of the focal species. We studied wider biodiversity values in long protected black stork (Ciconia nigra) nest sites, which were abandoned by the bird and thus legally subject to de-listing. In 20 abandoned nest sites in Estonia, we (i) mapped breeding birds within 600 m from the stork nest, and (ii) carried out time-limited surveys of lichens, polypore fungi, vascular plants and bryophytes in 2-ha plots. The breeding bird assemblages (64 species recorded) included 19 red-listed species, and showed no clear aggregation to the immediate surroundings of the stork nest. We recorded 740 plant and fungal species, of which 134 (18%) were of conservation concern (nationally protected, red-listed or extremely rare). Across the 2-ha plots, the numbers of the species of conservation concern varied more than three-fold (maximum 42 species), being affected notably by dead wood accumulation over time and presence of nemoral broad-leaved trees. The results demonstrate that many abandoned nest sites of the black stork have broader biodiversity significance, both due to the bird’s habitat requirements and the natural development during the protection. Expanding the umbrella function to sites abandoned by a focal species, but intact from anthropogenic degradation, can thus be a cost-effective conservation approach due to its low additional administrative burden. In most jurisdictions, the assessment procedure for such situations should be formalized, however.

     

Population genetics of the endangered Crowned Solitary Eagle (<Emphasis Type="Italic">Buteogallus coronatus</Emphasis>) in South America

The Crowned Solitary Eagle (Buteogallus coronatus) is one of the rarest and most severely threatened birds of prey in the Neotropical region. We studied levels of neutral genetic diversity, population structure, and the demographic history of the species using 55 contemporary samples covering a large fraction of the species range, which were genotyped at 17 microsatellite loci. Our results indicated genetic homogeneity across the sampled regions, which may be explained by a high dispersal capability of Crowned Solitary Eagles resulting in high gene flow or relatively recent population expansion. Further demographic tests revealed that the species has experienced a recent demographic reduction, but inbreeding was not detected. The existing connectivity between geographically separated populations may have buffered the negative effects of the demographic bottleneck. Alternatively, the demographic reduction may be too recent to detect a genetic signature due to the long generation time of the species. Potential conservation strategies, including the possibility of translocations of individuals, are discussed.     

Light microscopy and scanning electron microscopy studies on the reduction of the tongue microstructures in the white stork (Ciconia ciconia,Aves)

The structure of the tongue in the white stork (Ciconia ciconia) is observed macroscopically and under light and scanning electron microscopy. Our observations of the tongue reveal a rare terminal reduction of the size of the tongue and microstructures of the lingual mucosa among the investigations of birds published so far. The short, triangular tongue with a pointed tip is approximately 2.5 cm long in the adult and is situated in the caudal part of the oral cavity close to the laryngeal prominence. On the dorsal surface of the tongue, no typical mucosa microstructures like lingual papillae, median groove or lingual prominence are observed. The main structure of the tongue is composed of rostral part of hyoid apparatus, that is, entoglossal cartilage connects with basihyoid. Very thin mucosa is composed of fibrous connective tissue covered with orthokeratinized epithelium. No lingual glands and muscles are observed in the lamina propria of mucosa. Even though the triangular shape of the tongue in the white stork is typical for birds, the inner structure of the reduced organ is composed only of flat cartilagineous entoglossum of hyoid apparatus. During feeding behaviour of the white stork, the food transportation in oral cavity called cranio‐inertial transport is undoubtedly affected by structural reduction of the tongue.     

Why birds with deferred sexual maturity are sedentary on islands: a systematic review

Background

Island faunas have played central roles in the development of evolutionary biology and ecology. Birds are among the most studied organisms on islands, in part because of their dispersal powers linked to migration. Even so, we lack of information about differences in the movement ecology of island versus mainland populations of birds.

Methodology/Principal Findings

Here we present a new general pattern indicating that large birds with deferred sexual maturity are sedentary on islands, and that they become so even when they are migratory on the mainland. Density-dependent variation in the age at first breeding affects the survivorship of insular populations and this, in turn, affects the movement ecology of large birds. Because density-dependent variation in the age of first breeding is critical to the long-term survival of small isolated populations of long-lived species, migratory forms can successfully colonize islands only if they become sedentary once there. Analyses of the movement ecology of continental and insular populations of 314 species of raptors, 113 species of Ciconiiformes and 136 species of passerines, along with individual-based population simulations confirm this prediction.

Conclusions

This finding has several consequences for speciation, colonization and survival of small isolated population of species with deferred sexual maturity.     

Sexual dimorphism of acoustic signals in the oriental white stork: non-invasive identification of sex in birds

Identification of the sex of birds is important for captive breeding of endangered species. In the oriental white stork (Ciconia boyciana), an endangered species, both sexes produce an acoustic signal called "clatter" by rattling their mandibles together to generate sounds. We examined the structure of male and female clatter to determine whether clatter is sexually dimorphic. The acoustic structure of the clatter of the two sexes proved to be dimorphic with respect to the fundamental frequency; female clatter had higher fundamental frequencies. The fundamental frequency correlated significantly and positively with bill length, suggesting that bill morphology contributes to the sexual dimorphism of clatter. Sexing can be done by acoustic signals without capturing birds, and thus is useful as a non-invasive sexing method for ecological and conservation studies of birds.     

Testing the Goodness of Supplementary Feeding to Enhance Population Viability in an Endangered Vulture

Background

Human-predator conflicts are directly or indirectly threatening many species with extinction. Thus, biologists are urged to find simple solutions to complex situations while avoiding unforeseen conservation outcomes. The provision of supplementary food at artificial feeding sites (AFS) is frequently used in the conservation of scavenger bird populations currently suffering from indirect poisoning, although no scientific studies on its effectiveness have been conducted.

Methodology/Principal Findings

We used a long-term data set of 95 individually marked birds from the largest European core of the endangered bearded vulture (Gypaetus barbatus) to test the long-term effects of specific AFS for bearded vultures on their survival rates (by CMR models) and population dynamics (by Monte Carlo simulations) in an area where fatalities derived from illegal poisoning and the use of other toxics like veterinary drugs have increased over the last several years. Our data support the positive relationship between the use of AFS and survival. However, contrary to theoretical predictions (e.g. high and more stable adult survival among long-lived species), the use of AFS increased only survival of pre-adults. Moreover, AFS buffered the effects of illegal poisoning on this age-class, while adult survival decreased over years. Our simulations predicted a maximum value of extinction probability over a time horizon of 50 years. Population projections run with survival rates expected in scenarios without poisoning predicted the situation of least conservation concern, while including only AFS can maintain a large floater surplus that may delay population decline but fails to reduce poisoning risk among adults.

Conclusions/Significance

Although AFS are not effective to save bearded vultures from an expected population decline, they delay population extinction and can be a useful tool for prolonging population viability while combating illegal and indirect poisoning. The eradication of different sources of poisoning is of top priority to ensure the long-term viability of this and many other species.     

Population Genetic Analysis of Streptomyces albidoflavus Reveals Habitat Barriers to Homologous Recombination in the Diversification of Streptomycetes

Examining the population structure and the influence of recombination and ecology on microbial populations makes great sense for understanding microbial evolution and speciation. Streptomycetes are a diverse group of bacteria that are widely distributed in nature and a rich source of useful bioactive compounds; however, they are rarely subjected to population genetic investigations. In this study, we applied a five-gene-based multilocus sequence analysis (MLSA) scheme to 41 strains of Streptomyces albidoflavus derived from diverse sources, mainly insects, sea, and soil. Frequent recombination was detected in S. albidoflavus, supported by multiple lines of evidence from the pairwise homoplasy index (Φ_w) test, phylogenetic discordance, the Shimodaira-Hasegawa (SH) test, and network analysis, underpinning the predominance of homologous recombination within Streptomyces species. A strong habitat signal was also observed in both phylogenetic and Structure 2.3.3 analyses, indicating the importance of ecological difference in shaping the population structure. Moreover, all three habitat-associated groups, particularly the entomic group, demonstrated significantly reduced levels of gene flow with one another, generally revealing habitat barriers to recombination. Therefore, a combined effect of homologous recombination and ecology is inferred for S. albidoflavus, where dynamic evolution is at least partly balanced by the extent that differential distributions of strains among habitats limit genetic exchange. Our study stresses the significance of ecology in microbial speciation and reveals the coexistence of homologous recombination and ecological divergence in the evolution of streptomycetes.     

Have recent changes in forest structure reduced the Estonian black stork <Emphasis Type="Italic">Ciconia nigra</Emphasis> population?

The black stork Ciconia nigra is listed as a focal species for guiding forest management in Estonia, where forestry has recently intensified and the stork population has suffered a twofold decline. We explored a possible link between the decline of the population and man-induced changes in forest structure, by analysing nesting of the species in relation to forest cover, edge effects and stand structure. Although the storks had distinct habitat preferences (old remote stands near rivers and a certain distance far from ecotones in well-forested landscapes), these were hardly reflected in site re-occupancy and productivity. Therefore, changes in forest structure are probably not responsible for the population decline, although preferences for specific forest environments may limit the range of potential nest sites. The results indicated that edge avoidance cannot be considered a species-specific feature over large areas and clear habitat preferences are not necessarily related with the present success of a population. We also suggest that lists of focal species should be regularly updated and validated in the field.     

Giardiasis in a white stork in The Netherlands

Giardia sp. was found in the white stork (Ciconia ciconia) in The Netherlands for the first time. The Giardia sp. trophozoites that were found in the feces of a 6-wk-old white stork, were examined by light microscopy. The parasites closely resembled Giardia ardeae that had been isolated by others from several species of wading birds belonging to the order Ciconiiformes, sharing a deeply notched adhesive disk, a single caudal flagellum, and a single round median body. Serologically, the parasites did not react with anti-Giardia intestinalis monoclonal antibodies. Although no signs of intestinal disease were observed in the stork chick, the presence of parasites in all stages of development and the huge number of parasites show that the stork chick was experiencing an active infection with G. ardeae type parasites.     

Parallel Tagged Next-Generation Sequencing on Pooled Samples – A New Approach for Population Genetics in Ecology and Conservation

Next-generation sequencing (NGS) on pooled samples has already been broadly applied in human medical diagnostics and plant and animal breeding. However, thus far it has been only sparingly employed in ecology and conservation, where it may serve as a useful diagnostic tool for rapid assessment of species genetic diversity and structure at the population level. Here we undertake a comprehensive evaluation of the accuracy, practicality and limitations of parallel tagged amplicon NGS on pooled population samples for estimating species population diversity and structure. We obtained 16S and Cyt b data from 20 populations of Leiopelma hochstetteri, a frog species of conservation concern in New Zealand, using two approaches – parallel tagged NGS on pooled population samples and individual Sanger sequenced samples. Data from each approach were then used to estimate two standard population genetic parameters, nucleotide diversity (π) and population differentiation (F_ST), that enable population genetic inference in a species conservation context. We found a positive correlation between our two approaches for population genetic estimates, showing that the pooled population NGS approach is a reliable, rapid and appropriate method for population genetic inference in an ecological and conservation context. Our experimental design also allowed us to identify both the strengths and weaknesses of the pooled population NGS approach and outline some guidelines and suggestions that might be considered when planning future projects.     

Evidence for senescence in survival but not in reproduction in a short‐lived passerine

Senescence has been studied since a long time by theoreticians in ecology and evolution, but empirical support in natural population has only recently been accumulating. One of the current challenges is the investigation of senescence of multiple fitness components and the study of differences between sexes. Until now, studies have been more frequently conducted on females than on males and rather in long‐lived than in short‐lived species. To reach a more fundamental understanding of the evolution of senescence, it is critical to investigate age‐specific survival and reproduction performance in both sexes and in a large range of species with contrasting life histories. In this study, we present results on patterns of age‐specific and sex‐specific variation in survival and reproduction in the whinchat Saxicola rubetra, a short‐lived passerine. We compiled individual‐based long‐term datasets from seven populations that were jointly analyzed within a Bayesian modeling framework. We found evidence for senescence in survival with a continuous decline after the age of 1 year, but no evidence of reproductive senescence. Furthermore, we found no clear evidence for sex effects on these patterns. We discuss these results in light of previous studies documenting senescence in short‐lived birds. We note that most of them have been conducted in populations breeding in nest boxes, and we question the potential effect of the nest boxes on the shape of age‐reproductive trajectories.