Variation in local abundance and species richness of stream fishes in relation to dispersal barriers: implications for management and conservation

1. Barriers to immigration, all else being equal, should in principle depress local abundance and reduce local species richness. These issues are particularly relevant to stream‐dwelling species when improperly designed road crossings act as barriers to migration with potential impacts on the viability of upstream populations. However, because abundance and richness are highly spatially and temporally heterogeneous and the relative importance of immigration on demography is uncertain, population‐ and community‐level effects can be difficult to detect. 2. In this study, we tested the effects of potential barriers to upstream movements on the local abundance and species richness of a diverse assemblage of resident stream fishes in the Monongahela National Forest, West Virginia, U.S.A. Fishes were sampled using simple standard techniques above‐ and below road crossings that were either likely or unlikely to be barriers to upstream fish movements (based on physical dimensions of the crossing). We predicted that abundance of resident fishes would be lower in the upstream sections of streams with predicted impassable barriers, that the strength of the effect would vary among species and that variable effects on abundance would translate into lower species richness. 3. Supporting these predictions, the statistical model that best accounted for variation in abundance and species richness included a significant interaction between location (upstream or downstream of crossing) and type (passable or impassable crossing). Stream sections located above predicated impassable culverts had fewer than half the number of species and less than half the total fish abundance, while stream sections above and below passable culverts had essentially equivalent richness and abundance. 4. Our results are consistent with the importance of immigration and population connectivity to local abundance and species richness of stream fishes. In turn, these results suggest that when measured at appropriate scales (multiple streams within catchments), with simple protocols amenable to use by management agencies, differences in local abundance and species richness may serve as indicators of the extent to which road crossings are barriers to fish movement and help determine whether road‐crossing improvements have restored connectivity to stream fish populations and communities.     

Differential diameter-size effects of forest management on tree species richness and community structure: implications for conservation

In this paper we tested the hypothesis that logging effects in the adult tree community reverberate upon the regeneration contingent. We examined the differences on the tree community between forest reserves and 10 year-old logged areas in the Yucatan Peninsula. We used a paired design in three independent sites to estimate the effects of logging on tree species richness, diversity, composition and structure. Analyses were conducted differentiating individuals of four diameter-size classes: 1–5, 5–10, 10–25, and >25 cm DBH. We found out that there were differential effects by size. Species richness in the smaller and larger diameter-size classes was significantly lower in logged areas. Floristic composition was also different between logged and unlogged areas, with a trend towards more secondary forest associated species and less primary forest associated species in logged areas, and a higher density of species represented by a single individual in unlogged reserves. In terms of structure, trees DBH <10 cm, lianas, and re-sprouting stumps were more abundant in logged areas. Our findings suggest that 10 years after logging, harvested areas show alterations in structure, and potentially a reduction in species richness. We suggest that to make timber extraction and forest conservation compatible at this site, it is necessary to gain a better understanding of the ecology and regeneration requirements of the less abundant species, and to assess whether current logging practices might hinder their permanence in the study area.     

Pasture management in semi-arid tropical woodlands: Effects on species diversity

Abstract The effects of pasture management options (sowing introduced legumes and grasses, timber treatment, applying fertilizer, cultivation before sowing, and stocking rate) on species diversity were measured at two experimental sites (Hillgrove and Cardigan) near Charters Towers, northeast Queensland. Species were divided into three groups (sown, native and exotic) and diversity was measured as species density (number of species recorded in each plot and number of species/quadrat) annually from 1982 to 1992. The responses of individual native and naturalized species to treatment were also determined. All management options affected diversity but the responses varied with site and season, and with the different measurement scales. The density of sown species either increased or was unaffected by all the management options; there were no significant decreases. The density of native species showed both positive and negative responses; it increased at high stocking rates and with tree killing at Hillgrove, and decreased with pasture sowing and cultivation. The density of exotic species increased as stocking rate was increased and decreased when pastures were sown (although not at the quadrat scale at Hillgrove). Overall the most diverse vegetation was on plots grazed at high stocking rates; at the plot scale these were native pastures but at the quadrat scale the sown pastures had more species. Among the native and naturalized species, only Portulaca spp. were more frequent on the oversown plots than the native pasture plots; 48% (Hillgrove) and 68% (Cardigan) of the species were less frequent on the oversown plots. Fertilizer application had little effect on species frequencies, while timber treatment resulted in both increases and decreases in frequency of a small number of species. The species were divided into four groups on the basis of their responses to stocking rate: a grazing-sensitive group (e.g. Themeda triandra), two grazing-tolerant groups which either slightly decreased (e.g. Chrysopogon fallax) or slightly increased (e.g. Sida spinosa) in frequency as stocking rate increased, and a fourth group of species which were frequent only at high stocking rates (e.g. Bothriochloa pertusa). There were no close relationships between herbage yield and species density.     

片断森林植物多样性及其保护和恢复价值

森林片断化是导致生物多样性丧失最严重的单一因素。在片断森林中植物多样性除与片断面积有关外,还受边缘效应、瞬时取样效应、驰豫效应、远距离扩散的挽救效应以及背景生态系统的性质等影响。本文阐述了在这些综合因素影响下,片断森林中植物种类、丰富、性质的变化。由于这些综合因素的影响,不少片断森林尚有较高的保护价值,但需建立合适的评价体系和标准。片断森林在确定生态恢复目标、为恢复实践提供种源等方面也有重要价值。提出了对片断森林的保护措施。     

Palm species richness,abundance and diversity in the Yucatan Peninsula,in a neotropical context

Species richness, abundance and diversity patterns in palm communities in the Yucatan Peninsula were compared at three sites with different forest types (semi‐deciduous, semi‐evergreen and evergreen), as well as different precipitation, geomorphology and soil depth. All individual palms, including seedlings, juveniles and adults, were identified and counted in forty‐five (0.25 ha) transects. A total of 46 000 individual palms belonging to 11 species from nine genera and two subfamilies were recorded. Palm richness, diversity and abundance were highest in the evergreen forest. Species from the subfamily Coryphoideae dominated the semi‐deciduous and semi‐evergreen forests while species from the subfamily Arecoideae dominated the evergreen forest. Seven species were found only in the evergreen forest. Chamaedorea seifrizii and Sabal yapa were found in all three forest types, while Thrinax radiata was found in the semi‐deciduous and semi‐ evergreen forests and Cocothrinax readii only in the semi‐evergreen forest. Compared to other neotropical palm communities, the richness and diversity in the Yucatan Peninsula are lower than in the western Amazon basin. Although palm richness and diversity on the Yucatan Peninsula were positively associated with precipitation, other variables, in particular soil depth and fertility as well as habitat heterogeneity (microtopography and canopy cover), need to be considered to better understand the observed patterns.     

Genetic diversity of the endangered species Rosa rugosa Thunb. in China and implications for conservation strategies

Rosa rugosa Thunb. is one of the dominant and important shrub species in estuary dunes and shingle beaches of northern China. However, its area of distribution, the number of populations, and the size of each population have decreased rapidly in the past two decades because of habitat degradation and loss. Random amplified polymorphic DNA markers were used to determine the genetic diversity of four remaining large natural populations of R. rugosa and to discuss an effective conservation strategy for this endangered species in China. High genetic variations were detected in R. rugosa populations in China. The mean percentage of polymorphic loci （P%） within four local populations was 57.99%, with the P% of the total population being 75.30%. Mean Shannon＇s information index （H0） was 0.2826, whereas total Ho was 0.3513. The genetic differentiation among populations was 0.1878, which indicates that most genetic diversity occurs within populations. Population Tumenjiang （TMJ） showed the highest genetic diversity （P% = 66.27%; H0 = 0.3117） and contained two exclusive bands. Population Changshandao （CSD） showed higher genetic diversity （P% =59.04%; H0 = 0.3065）. Populations TMJ and CSD contained 95.33% and 99.33%, respectively, of loci with moderate to high frequency （P〉0.05） of the total population. These results indicate that populations TMJ and CSD should be given priority for in situ conservation and regarded as seed or propagule sources for ex situ conservation. The results of the present study also suggest that R. rugosa in China has become endangered as a result of human actions rather than genetic depression of populations; thus, human interference should be absolutely forbidden in R. rugosa habitats.     

Genetic diversity in fragmented populations of the critically endangered spider orchid Caladenia huegelii: implications for conservation

The Orchidaceae is characterised by a diverse range of life histories, reproductive strategies and geographic distribution, reflected in a variety of patterns in the population genetic structure of different species. In this study, the genetic diversity and structure was assessed within and among remnant populations of the critically endangered sexually deceptive orchid, Caladenia huegelii. This species has experienced severe recent habitat loss in a landscape marked by ancient patterns of population fragmentation within the Southwest Australian Floristic Region, a global biodiversity hotspot. Using seven polymorphic microsatellite loci, high levels of within-population diversity (mean alleles/locus = 6.73; mean H _E = 0.690), weak genetic structuring among 13 remnant populations (F _ST = 0.047) and a consistent deficit of heterozygotes from Hardy–Weinberg expectation were found across all populations (mean F _IS = 0.22). Positive inbreeding coefficients are most likely due to Wahlund effects and/or inbreeding effects from highly correlated paternity and typically low fruit set. Indirect estimates of gene flow (Nm = 5.09 using F _ST; Nm = 3.12 using the private alleles method) among populations reflects a historical capacity for gene flow through long distance pollen dispersal by sexually deceived wasp pollinators and/or long range dispersal of dust-like orchid seed. However, current levels of gene flow may be impacted by habitat destruction, fragmentation and reduced population size. A genetically divergent population was identified, which should be a high priority for conservation managers. Very weak genetic differentiation indicates that the movement and mixing of seeds from different populations for reintroduction programs should result in minimal negative genetic effects.     

Surrounding land use significantly influences adult mosquito abundance and species richness in urban mangroves

Mangroves harbor mosquitoes capable of transmitting human pathogens; consequently, urban mangrove management must strike a balance between conservation and minimizing public health risks. Land use may play a key role in shaping the mosquito community within urban mangroves through either species spillover or altering the abundance of mosquitoes associated with the mangrove. In this study, we explore the impact of land use within 500 m of urban mangroves on the abundance and diversity of adult mosquito populations. Carbon dioxide baited traps were used to sample host-seeking female mosquitoes around nine mangrove forest sites along the Parramatta River, Sydney, Australia. Specimens were identified to species and for each site, mosquito species abundance, species richness and diversity were calculated and were analyzed in linear mixed effects models. We found that the percentage of residential land and bushland in the surrounding area had a negative effect on mosquito abundance and species richness. Conversely, the amount of mangrove had a significant positive effect on mosquito abundance, and the amount of industrial land had a significant positive effect on species richness. These results demonstrate the need for site-specific investigations of mosquito communities associated with specific habitat types and the importance of considering surrounding land use in moderating local mosquito communities. A greater understanding of local land use and its influence on mosquito habitats could add substantially to the predictive power of disease risk models and assist local authorities develop policies for urban development and wetland rehabilitation.     

Identifying indicator species for bryophyte conservation in fragmented forests

It is important to conserve bryophyte diversity in fragmented forests, due to the vulnerability of this group to environmental change. In this study, the utility of bryophyte functional groups (taxonomic classes, substrate classes, and life-forms) was examined as indicators for planning urban area conservation of bryophyte diversity. The study sites comprised 27 fragmented forests in Kyoto City, Japan. Using linear regression models, it was found that the species richness of almost all functional groups was positively correlated with patch size. Furthermore, two types of bryophyte life-form (fans and thalloid mats) were significantly correlated with environmental factors considered important for conservation planning. The species richness of fan bryophytes was positively correlated with the presence of natural forest patches and was negatively correlated with distance from mountainous areas. Similarly, the species richness of thalloid mat bryophytes was negatively correlated with maintenance practices. These results may be explained by the vulnerability of these two bryophyte groups to environmentally caused drought stress, accompanied by decreasing patch size, maintenance practices, disturbance, and/or loss of natural vegetation. Considering that drought stress represents a major threat to bryophyte diversity in fragmented forests, the species richness of hygrophilous life-forms (e.g., fans and thalloid mats) may be used as an indicator of fragmented forests that are less affected by drought stress, and these species should be preferentially conserved to maintain high levels of bryophyte diversity.     

Species richness, species range size and ecological specialisation among African primates: geographical patterns and conservation implications

The geographical distribution of species richness and species range size of African anthropoid primates (catarrhines) is investigated and related to patterns of habitat and dietary niche breadth. Catarrhine species richness is concentrated in the equatorial regions of central and west Africa; areas that are also characterised by low average species range sizes and increased ecological specificity. Species richness declines with increasing latitude north and south of the equator, while average species range size, habitat and dietary breadth increase. Relationships between species richness, species range size and niche breadth remain once latitudinal and longitudinal effects have been removed. Among areas of lowest species richness, however, there is increased variation in terms of average species range size and niche breadth, and two trends are identified. While most such areas are occupied by a few wide-ranging generalists, others are occupied by range-restricted specialist species. That conservation efforts increasingly focus on regions of high species richness may be appropriate if these regions are also characterised by species that are more restricted in both their range size and their ecological versatility, although special consideration may be required for some areas of low species richness.     

Community relaxation in fragmented landscapes: the relation between species richness, area and age

Estimates of species loss due to habitat destruction are normally based on calculations employing the species–area relation, S = cA ^z . The validity of this approach is based on the assumption that the value of the exponent ( z ) defining the slope of the species–area relation in nonfragmented communities is at a steady state and that z is thus a constant. However, departure from such an assumption renders this approach unreliable. Here I report the results from a natural field experiment using "model" bryophyte-based microlandscapes designed to follow the species richness dynamics of microarthropod communities postfragmentation. Community isolation due to fragmentation initiated a delayed community relaxation process and resulted in substantial local extinction. Over the period of the experiment z declined in the control communities and yet remained fairly stable in the fragmented communities. I conclude that predictions of species loss due to habitat fragmentation that do not take into account the fact that often z may not be a constant may lead to error-prone predictions of future species loss.     

Predator abundance in relation to small game management in southern Portugal: conservation implications

The interaction between hunting interests and legally protected predators is often a contentious conservation problem, requiring detailed understanding of predator responses to game management. This issue was addressed in southern Portugal in a treatment-control natural experiment, whereby the abundances of small game, corvids, birds of prey and carnivores were compared in 12 game estates (>500 ha) and 12 matching areas with similar sizes and land uses but no game management. European rabbits (Oryctolagus cuniculus), Iberian hares (Lepus granatensis) and, less so, red-legged partridges (Alectoris rufa) were far more numerous in game estates than elsewhere. Among legally controlled species, there were less Eurasian jays (Garrulus glandarius) but more red foxes (Vulpes vulpes) in game estates, though the latter were primary targets of predator culling. Fox abundance within game estates varied inversely with an index of management intensity (density of small game feeding sites) and increased along with hare abundance. As for protected species, only common kestrels (Falco tinnunculus) and genets (Genetta genetta) were fewer in game estates. The abundance of raptors within game estates varied inversely with gamekeeper density, whereas that of common buzzards (Buteo buteo) increased along with rabbit abundance. Overall, there was little evidence that game management reduced local predator abundances, except in the most intensively managed estates. Game estates provided concentrations of prey that was scarce elsewhere, which may have favoured increased abundances of some predators. Further investigations are needed to find out whether high prey densities may attract predators to game estates with increased mortality risk, which may thus become population sinks for protected species.     

Geographical patterns and determinants of species richness in Mexico across selected families of vascular plants: implications for conservation

Mexico is considered a megadiverse country containing more than 10% of the world's biodiversity. The distribution of this species richness and endemism is different among the different Mexican states. We examined the species richness patterns of 13 families of vascular plants (including ferns, gymnosperms and angiosperms) in Mexico using political divisions (states) as units of analysis. We analysed the species richness values (absolute richness, endemic richness and restrictive richness) of these plant families using stepwise multiple regression analysis, assessing their relationship with a set of 10 environmental variables (expressed as heterogeneity coefficients). A combined cluster analysis with multidimensional scaling analysis (MDS) and an analysis of similarities were also undertaken to define the spatial–geographical patterns. Additionally, we proposed a methodological strategy to determine which states of Mexico have priorities for conservation. Our results suggested that the three species richness values used were significantly predicted by environmental factors, especially by climatic heterogeneity. Notwithstanding that a linear pattern was recognized, the Mexican states were gathered in four groups, which were confirmed by the MDS and the cluster analysis: (1) the Yucatan Peninsula, (2) arid Mexico, (3) the Mexican Transition Zone and (4) the megadiverse states. We proposed that 12 Mexican states include all the environmental conditions and are candidates for developing conservation programmes: (1) Quintana Roo, Tabasco and Yucatán, (2) Baja California, Chihuahua and Sinaloa, (3) Guerrero, Jalisco and Nuevo León and (4) Chiapas, Oaxaca and Veracruz.     

Floristic diversity in fragmented Afromontane rainforests: Altitudinal variation and conservation importance

Question: How does the floristic diversity of Afromontane rainforests change along an altitudinal gradient? What are the implications for conservation planning in these strongly fragmented forest areas that form part of the Eastern Afromontane Biodiversity Hotspot? Location: Bonga, southwestern Ethiopia. Methods: Based on evidence from other montane forests, we hypothesized that altitude has an effect on the floristic diversity of Afromontane rainforests in southwestern Ethiopia. To test this hypothesis, detailed vegetation surveys were carried out in 62 study plots located in four relatively undisturbed forest fragments situated at altitudes between 1600 m and 2300 m. Floristic diversity was evaluated using a combination of multivariate statistical analyses and diversity indices. Results: Ordination and indicator species analyses showed gradual variations in floristic diversity along the altitudinal gradient with a pronounced shift in species composition at ca. 1830 m. Upper montane forest (>1830 m) is characterized by high fern diversity and indicator species that are Afromontane endemics. Lower montane forest (<1830 m) exhibits a greater diversity of tree species and a higher abundance of the flagship species Coffea arabica. Conclusions: Our results provide crucial ecological background information concerning the montane rainforests of Ethiopia, which have been poorly studied until now. We conclude that both forest types identified during this study need to be considered for conservation because of their particular species compositions. Owing to the high degree of forest fragmentation, conservation concepts should consider a multi‐site approach with at least two protected areas at different altitudinal levels.     

Anuran species richness,complementarity and conservation conflicts in Brazilian Cerrado

Broad-scale correlations between species richness and human population suggest that processes driving species richness, mainly related to high ecological productivity, may also drive human populations. However, it is still under debate if this coincidence implies conflicts between biodiversity conservation and human development. In this paper, we analyzed the relationships among human population size, species richness and irreplaceability in Brazilian Cerrado. We analyzed a dataset with 131 species of anurans distributed in 181 cells with 1° of spatial resolution covering the biome. We found a positive correlation between human population size and anuran species richness (r = 0.46; P = 0.033 with 19.5 geographically effective degrees of freedom, v*), but the irreplaceability of each cell was poorly correlated with human population size (r = 0.075; P = 0.323; v* = 173.9). The 17 cells in the 97 optimal reserve networks contained a total human population ranging from 2942,195 to 4319,845 people, representing on average 11.8% of the human population in the entire Cerrado grid. The comparison of these observed values with 10,000 values from randomly generated networks suggests a relatively high flexibility in optimal complementarity sets for reserve selection. Our results indicated that correlation between richness and human population does not necessarily result in conflicts, given the opportunities for conciliating conservation and development. However, the analyses performed here are initial explorations within the framework of conservation biogeography, so more detailed studies are necessary to establish conservation planning at regional and local scales.     

Patterns of allozyme diversity in several selected rare species in Korea and implications for conservation

Because some endemic plants appear to be adapted to a narrow setof environmental conditions with limited genetic diversity, an analysis ofpopulation genetic structure is necessary to fully evaluate the impact of rarityon genetic variation. Listed as endangered species in Korea, only fewpopulations of Abeliophyllum distichum, Leonticemicrorhyncha, Bupleurum euphorbioides, andBerchemia berchmiaefolia were found. A reduced level ofgenetic variation in B. berchemiaefolia is consistent withthe occurrence of a genetic bottleneck and inbreeding. Leonticemicrorhyncha differed dramatically from other taxa in its observed level of geneticvariation, probably due to its predominant selfing. The level ofallozyme variation maintained by A. distichum was high forendemic species. Compared to species with similar traits, A.distichum maintained a relatively higher genetic diversity, probably dueto floral heteromorphism and preferred outcrossing. Bupleurumeuphorbioides maintained a higher genetic diversity due to outcrossing,but at the individual locus, deficiency of heterozygosity prevailed. Probablyinbreeding between local neighborhoods was frequent because A.distichum and B. euphorbioides were pollinatedby small fly species which might be less effective as a pollen dispersal, andtheir visits were extremely scarce and controlled by the weather conditions.Since much of the species-to-species variation in genetic diversity is due tothe specific ecological and evolutionary history of a species, any managementplan developed should be based on historical changes in the population size anddistribution to better predict the amounts and patterns of genetic diversity.     

Plants in traditional home gardens: richness,composition, conservation and implications for native biodiversity in Benin

Home gardens have received increasing attention and have been insistently presented as hotspots for agro-biodiversity over the last decades. However, apart from their exceptional high plant species diversity, there is little quantitative evidence of the effectiveness of plant species conservation in home gardens. This study examined this issue by assessing (i) the size and membership of garden flora and the contribution to the maintenance of the national flora, (ii) how home garden flora connects to the larger ecosystem it belongs to and (iii) the conservation status of plant species at the home garden level. 360 home gardens distributed in three agro-ecological zones and nine phyto-geographical districts in Benin were visited and inventoried. Diversity parameters at different taxonomic levels were calculated. Species accumulation and spatial occupancy, multivariate methods and rarity index were also used for data analysis. Findings showed that the 360 studied home gardens hosted up to 14.21% of plant species and 44.32% of plant families of the national flora. Home garden flora was constantly dominated by exotic plant species but strongly connected to their surrounding ecosystems, being composed of at least 60% of plant species from their phyto-geographical districts. Finally, home garden plant species were mostly rare and threatened at the home garden level. In this study, we acknowledge the contribution of home gardens to the maintenance of plant species diversity at regional and global levels than local level. Based on the observed prevalence of exotic species, HG effectiveness in sustainably conserving native plant species biodiversity remains questionable.