Modelling nearshore intertidal habitat use of young-of-the-year Pacific sand lance (Ammodytes hexapterus) in Barkley Sound, British Columbia, Canada

The Pacific sand lance (Ammodytes hexapterus) is an ecologically important prey species for many vertebrate marine predators in the Pacific Northwest. In this study, we examined the use of intertidal habitat by young of the year (YOY) sand lance in Barkley Sound, British Columbia. We selected 14 of the original 29 independent environmental variables for modelling based on univariate analysis for variable selection. These were then used to model sand lance presence-absence using a classification tree approach. Based on our models we found that sand lance avoided mud and intertidal eelgrass. For sites that had very little mud and no intertidal eelgrass, sand lance preferred sediment size mean ≥1,918 μm or sites with sediment size mean ≤1,918 μm but with relatively well sorted sediment (sorting values ≤2.56 SDs, used as a heterogeneity index of the substrate grain size). Adjacent subtidal characteristics were not found to be important at this scale of study. This suggests intertidal substrate characteristics and presence-absence of intertidal eelgrass are the main influences on occurrence of YOY in the intertidal. Our results support the hypothesis that sand lance are associated with particular sediment types, however intertidal sediment types used by sand lance in our study differ from known preferences of sand lance for subtidal sediment types. This difference may be due to unique habitat constraints for intertidal versus subtidal regions. Although it is unknown if the results of this study are widely applicable, the results begin to identify intertidal habitat features that are important for Pacific sand lance.     

Macrophyte beds contribute disproportionately to benthic invertebrate abundance and biomass in a sand plains stream

Macrophyte beds have been shown to influence organic matter retention and nutrient processing in streams. Less is known about the extent to which plant beds contribute to abundance, biomass, and diversity of macroinvertebrate assemblages in low-order streams. We measured aquatic invertebrate abundance, biomass, and diversity associated with plant beds and sand/gravel patches in a low-gradient second-order stream in the Central Sand Plains of Wisconsin, USA from March to October. Invertebrate abundance and biomass were higher on average in plant beds (2,552 m⁻² and 1,575 mg m⁻²) than in sand/gravel patches (893 m⁻² and 486 mg m⁻²). Although sand/gravel habitat was over three times more abundant than plant beds in the study reach, plant beds and sand/gravel patches contributed similarly to invertebrate abundance and biomass at the whole-reach scale. The abundance and biomass of invertebrates associated with plant beds decreased from spring to autumn. Non-insect invertebrates in the plant beds increased in relative abundance as the year progressed. Shannon–Weiner diversity and taxa richness of invertebrates were higher in the plant beds than in the sand/gravel habitat. Our results suggest that plant beds can represent hot spots for invertebrate abundance and production in low-gradient streams, and have implications for stream management and restoration in these types of ecosystems. Handling editor: S. I. Dodson     

Validation of annual periodicity in otoliths of red snapper, <Emphasis Type="Italic">Lutjanus campechanus</Emphasis>

The periodicity of otolith growth increments (opaque and translucent zones) from adult red snapper (Lutjanus campechanus) was examined through a mark and recapture study (2005–2010), and laboratory holding of hatchery reared red snapper over a 2 year period (2002–2004). Wild red snapper (n = 295) were caught hook-and-line, marked with anchor tags, injected with oxytetracycline dihydrate (OTC), and released in the Gulf of Mexico 15–40 km south of Dauphin Island, Alabama. Marked fish were recaptured up to 2.8 years after release (n = 35) and sagittal otoliths were dissected, sectioned and examined under white and blue-violet light. The number of opaque growth zones past the OTC mark was compared to time at liberty for each fish and supported an annual periodicity of growth increment formation. Also, most (87%) of the hatchery reared fish showed two opaque zones that supported an annual increment formation rate. However, an unusual timing of opaque zone formation was shown for mark-recaptured fish. Based on known timing of OTC marking, otoliths from mark-recapture fish showed opaque zone formation from late summer (August) to early winter (December). This fall formation of opaque zones is in contrast to previous studies and its timing may relate to the end of spawning for this species.     

Eelgrass,Zostera marina,as essential fish habitat for young‐of‐the‐year winter flounder,Pseudopleuronectes americanus (Walbaum, 1792) in Maine estuaries

Distribution and density by habitat for age‐0, young‐of‐the‐year (YOY) winter flounder, Pseudopleuronectes americanus (Walbaum, 1792), were compared for two Maine estuaries to help define essential fish habitat for this life history stage. Two estuaries (Weskeag River and Penobscot Bay) along Mid‐coast Maine were sampled monthly with daytime 1.0 m² fixed‐frame throw traps around neap low tide, May–December over two consecutive years (2003–2004). Both eelgrass and adjacent sand/mud (20–60 cm deep) were randomly sampled with equal effort (4–12 samples per month) at two sites in both the Weskeag River and Penobscot Bay. Significantly higher densities of YOY winter flounder (2–9 cm TL) occurred in eelgrass relative to sand/mud. Density increased significantly in both habitats in 2004, and was higher in Penobscot Bay relative to the Weskeag River. YOY densities compared by eelgrass coverage within throw traps were found to be significantly higher in eelgrass that exceeded 30% coverage when compared with adjacent sand/mud areas and eelgrass coverage of 10–20%. YOY occurred in all months sampled (May–December); no density differences existed by month. These results indicate that very shallow (<0.6 m) eelgrass habitat is of key importance to YOY winter flounder in Maine estuaries and should be viewed as essential fish habitat (EFH) for this species and life stage.     

Density estimation and survey validation for swift fox <Emphasis Type="Italic">Vulpes velox</Emphasis> in Oklahoma

The swift fox Vulpes velox Say, 1823, a small canid native to shortgrass prairie ecosystems of North America, has been the subject of enhanced conservation and research interest because of restricted distribution and low densities. Previous studies have described distributions of the species in the southern Great Plains, but data on density are required to evaluate indices of relative abundance and monitor population trends. We examined regressions of swift fox density (estimated by mark-recapture) on timed-track surveys, scat surveys, and catch-per-unit effort indices. Seventy-nine swift foxes (42 male, 37 female) were captured 151 times during 10 240 trapnights between May 2003 and December 2004 in the Panhandle of Oklahoma, USA. Density estimates, based on mark-recapture data from autumn 2004, were 0.08–0.44 foxes/km². Survey indices explained 51 to 76% of the variation in estimates of fox density. Our study indicates that surveys of time-to-track encounters and scat deposition rates show promise in monitoring trends in population abundance over large areas.     

Changes in biodiversity of phytoplankton,zooplankton, fishes and macrobenthos in the Southern Caspian Sea after the invasion of the ctenophore <Emphasis Type="Italic">Mnemiopsis Leidyi</Emphasis>

Monitoring for 6 years (2001–2006) showed that the population explosion of the alien ctenophore Mnemiopsis leidyi in the southern Caspian Sea coincided with a decline in the abundance and species number of mesozooplankton. While this decline appeared to have reduced the nourishment of sprat (also known as kilka), it seemed to have affected phytoplankton favorably mainly due to the decrease in grazing pressure. During 2001–2002, when M. leidyi abundance and biomass were at their highest levels, abundance of dinoflagellates and cyanophytes exceeded that of diatoms. Before the invasion (1996) and in some years after the invasion (2003, 2004 and 2006) diatom abundance was higher than the abundance of other groups. In September 2005, an unprecedented bloom of the toxic cyanophyte Nodularia sp. was observed in the southern Caspian Sea. Disappearance of edible zooplankton such as Eurytemora spp. was among the first changes observed after the expansion of M. leidyi in the area. Some changes in the macrobenthic fauna were also conspicuous after the increase of this ctenophore. While the biomass of some deposit feeders, such as the polychaete Nereis diversicolor and oligochaete species increased, benthic crustaceans decreased sharply in abundance during 2001–2003 and completely disappeared during 2004–2006. Iranian catches of kilka, the most abundant and widespread zooplanktivorous fish, decreased significantly in the southern Caspian Sea after 1999. Iranian landings of kilka dropped ~70% from 69,070 ± 20,270 t during 1995–2000 to 23,430 ± 12,240 t during 2001–2006, resulting in a loss of at least 125 million US dollars to the economy. There were also changes in the total catches of large predators such as the kutum and mullet, which mainly feed on kilka, between 1991 and 2006.     

Habitat characteristics of crayfish (<Emphasis Type="Italic">Paranephrops planifrons</Emphasis>) in New Zealand streams using generalised additive models (GAMs)

Quantitative data on the habitat characteristics of stream crayfish have been generally lacking and competing demands on water resources has created a need to address this knowledge gap. We investigated day-time habitat relationships of stream crayfish (Paranephrops planifrons White) from 793 quadrats at 30 rivers and streams in the North Island, New Zealand to develop models of koura presence–absence and abundance. The model (stepwise GAM) included width, cover, median substrate size, edge location, velocity and depth, and correctly predicted presence–absence of crayfish (8–39 mm OCL) at 73.4% of quadrats and of young-of-the-year (YOY) ≤8 mm OCL at 83.4% of quadrats. Streams ranged from 1.6 to 11.5 m in width and the probability of finding both crayfish size classes reduced sharply as streams became wider than 6 m and as the substrate became large (i.e., boulder > 256 mm). Crayfish, particularly YOY, were most likely to be found in association with cover and at the stream edge. YOY were associated with shallow depths and fine substrates, whereas larger crayfish showed a preference for cobble substrate. Undercut banks, leaf litter, tree roots, and woody debris were strongly related to the presence–absence of crayfish. The model for crayfish abundance (log-linear Poisson GAM) explained 50% of the variation between quadrats with cover, velocity, edge location, depth, and the overall crayfish abundance at each particular stream being significant variables. Highest crayfish numbers were recorded in still or slow flowing water, with the majority occurring where velocities were below 0.4 m/s. Water depths up to 0.7 m were sampled, but highest numbers were found in depths of 0.2–0.3 m. Our presence–absence model determined variables that were significant over all streams, whereas our abundance model determined variables that were significant within streams. Use of the GAMs models enabled us to untangle the multiple factors contributing to habitat selection. Cover, velocity, and locations at the stream edge were important determinants of both presence–absence and abundance. Generally, substrate was important when comparing between streams, but not within streams, whereas depth was a significant determinant of abundance within streams, but not presence–absence between streams. Handling editor: K. Martens     

Selection and preference of benthic habitat by small and large ammocoetes of the least brook lamprey (<Emphasis Type="Italic">Lampetra aepyptera</Emphasis>)

In this laboratory study, we quantified substrate selection by small (<50 mm) and large (100–150 mm) ammocoetes of the least brook lamprey (Lampetra aepyptera). In aquaria, ammocoetes were given a choice to burrow into six equally-available substrate types: small gravel (2.360–4.750 mm), coarse sand (0.500–1.400 mm), fine sand (0.125–0.500 mm), organic substrate (approximately 70% decomposing leaves/stems and organic sediment particles, and 30% silt and fine sand), an even mixture of silt, clay, and fine sand, and silt/clay (<0.063 mm). Fine sand was selected with a significantly higher probability than any other substrate. Fine sand habitat is limited in many streams, in part owing to geology, but also as a result of channelization and excessive silt/clay sedimentation, which is a conservation concern. Our results indicate that ammocoetes of least brook lampreys are habitat specialists that prefer fine sand habitat. Hence, availability of fine sand habitat may limit distributions and population sizes.     

Diversity and species composition of peracarids (Crustacea: Malacostraca) on the South Greenland shelf: spatial and temporal variation

The interannual variability in peracarid (Crustacea: Malacostraca; Amphipoda, Isopoda, Cumacea, Tanaidacea) species composition and diversity on the South Greenland shelf was studied at four stations over a sampling period of 3 years (2001, 2002 and 2004), using a Rauschert sled at depths of about 160 m. The South Greenland peracarids were relatively stable over the 3 years with respect to evenness and diversity. Moderate changes in temperature and salinity had negligible effects on the species composition, while sediment structure was found to be the most important environmental variable shaping the peracarid fauna.     

Is recruitment of the temperate sand goby,sagamia geneionema, affected by habitat patch characteristics?

The temperate annual goby,Sagamia geneionema, showed pronounced spatial variation in recruitment among 8 isolated sand patches within a 1-ha area at Aburatsubo, Miura Peninsula, central Japan. Investigations were conducted to determine if such among-patch variation stemmed from differences in patch attributes, including patch size, sediment grain size, food availability, and densities of predators and heterospecific residents. No relationship between recruit density and each of the 5 attributes measured was found, although among-patch variability in patch attributes was apparent. This result suggests that recruitment was not influenced by patch characteristics. The mechanisms that produce among-patch variation in recruitment may be explained in part, by the aggregating behavior of presettlement individuals in the water column above the sand patches.     

Seasonal temperature and precipitation regulate brook trout young‐of‐the‐year abundance and population dynamics

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Patch occupancy in the endangered butterfly Lycaena helle in a fragmented landscape: effects of habitat quality, patch size and isolation

While there is agreement that both habitat quality and habitat network characteristics (such as patch size and isolation) contribute to the occupancy of patches by any given species, the relative importance of these factors is under debate. This issue is of fundamental ecological importance, and moreover of special concern for conservation biologists aiming at preserving endangered species. Against this background we investigated patch occupancy in the violet copper Lycaena helle, one of the rarest butterfly species in Central Europe, in the Westerwald area (Rhineland-Palatinate, Western Germany). Occupied (n = 102) differed from vacant (n = 128) patches in altitude, size, connectivity, availability of wind shelter, in the abundance of the larval host-plant, in the abundance of a grass species indicating favorable habitat conditions and in the abundance of nitrophilous plants. Overall, patch occupancy was primarily determined by patch size, connectivity and the abundance of the larval host plant, while all other parameters of habitat quality were of subordinate importance. Therefore, our findings suggest that even for extremely sedentary species such as L. helle habitat networks are decisive and—next to the preservation of habitat quality—need to be an integral part of any conservation management for this species.     

Size-related dietary changes observed in young-of-the-year pumpkinseed (<Emphasis Type="Italic">Lepomis gibbosus</Emphasis>): stomach contents and fatty acid analyses

Changes in dietary composition and its effects on the fatty acid (FA) composition of young-of-the-year (YOY) pumpkinseed (Lepomis gibbosus) from an artificial reservoir (Mirgenbach—northeastern France) were related to body size as shown by stomach content and FA analyses. Comparisons were made between three size classes of fishes: 25–35 mm total length (TL), 35–45 mm TL and 45–55 mm TL. Diets of the youngest L. gibbosus (TL ≤ 35 mm) consisted mainly of zooplanktonic microcrustaceans and Chironomidae. Ontogenetic development influenced the FA composition of L. gibbosus. Older YOY L. gibbosus showed an increase in proportions of monounsaturated FA proportions and a decrease in polyunsaturated FA and mainly essential FA (particularly docosahexaenoic acid). The low ω3/ω6 ratio and low PUFA content (mainly on DHA) suggested that L. gibbosus would not transfer the benefits of consuming ω3 PUFA up the food web.     

Effects of habitat edges on American lobster abundance and survival

Habitat edges frequently possess distinct ecological conditions that affect interactions such as competition and predation. Within a species' preferred habitat, the structural complexity and resource availability of adjacent habitats may influence the effect of edges on ecological processes. In nearshore waters of New England, American lobsters (Homarus americanus) inhabit fragmented cobble reefs that often are bordered by unvegetated sediment and occasionally by seagrass. We determined whether proximity to cobble patch edges, microhabitat characteristics within cobble habitat, and the type of habitat adjacent to cobble patches (seagrass or unvegetated sediment) influence the density and survival of juvenile and adult American lobsters in Narragansett Bay, Rhode Island, USA. We surveyed naturally occurring cobble patches and artificial cobble reefs to determine how the odds of finding lobsters varied with distance from the edge and habitat type. Additionally, we tethered lobsters at different distances from the edge inside and outside of cobble patches to determine how lobster relative survival varied with edge proximity and habitat type. In cobble habitat, the odds of finding large lobsters (adolescents and adults > 40 mm carapace length (CL)) were highest near patch edges regardless of adjacent habitat type, whereas smaller lobsters (e.g. emergent juveniles 15-25 mm CL) were more abundant in patch interiors when seagrass bordered cobble patches. The odds of finding lobsters also increased with the relative amount of cobble cover within patches. In predation experiments, lobster relative survival after 6 h was lowest outside of cobble and increased toward cobble patch interiors, but after 24 h this trend disappeared or reversed. Seagrass appeared to offer greater refuge for lobsters than did unvegetated sediment. Our results suggest that proximity to patch edges influences lobster distribution and survival, and that edge effects on lobsters vary with life history phase and with the type of habitat adjacent to cobble patches.     

Application of a roding survey method to the sedentary Eurasian Woodcock <Emphasis Type="Italic">Scolopax rusticola</Emphasis> population in Pico Island,Azores

The Eurasian Woodcock Scolopax rusticola is a resident species in Azores, Madeira and Canaries (Macaronesian archipelagos) in contrast to its mainly migrant continental populations. The biology and ecology of these insular populations are still poorly known; however, woodcocks are hunted in Azores and Madeira. This work aims to continuing bridging the gap between scientific knowledge and game management of woodcocks in Azores. Working at Pico Island, the main objectives were: (a) to characterize the roding activity of these insular populations, (b) to select the best period of the breeding season to perform a roding survey and (c) to evaluate how sensitive is this method to variations in abundance because of hunting. From January to July 2002, the number of contacts with roding birds (males) was recorded, at dusk, at three observation points. Roding started in the beginning of February and lasted until late June/early July. The weekly variation in the number of contacts was similar in all points, strongly suggesting that the roding survey should be performed between the beginning of March and middle April. Two of the three observation points, located in an area where woodcock hunting is allowed in alternate years, were surveyed between March 1 and April 15, 2001–2005. The two points presented a similar annual variation pattern in the number of contacts, also suggesting stability in abundance. Sex ratio among birds bagged during three consecutive hunting seasons (October–November, 2002–2004) or among birds collected periodically during two winters (2000–2002) was equal to one, suggesting that annual fluctuations by the roding survey can be extended to the female fraction.     

Feeding of <Emphasis Type="Italic">Themisto libellula</Emphasis> (Amphipoda Crustacea) on natural copepods assemblages in an Arctic fjord (Kongsfjorden,Svalbard)

Ingestion rates and selectivity of the Arctic pelagic amphipod Themisto libellula were studied experimentally in Kongsfjorden (Svalbard, 78°N) during the summer period. Feeding incubations were conducted on naturally occurring copepod communities at different concentrations ranging from 25 to 250 preys L⁻¹. The ingestion rates increased with food availability from 1.3 to 17.7 preys ind⁻¹ day⁻¹, which corresponded to 0.3–11% of body carbon day⁻¹. Despite the high prey concentration used in the experiments the satiation level was not reached. We suggested that T. libellula is able to take the maximum benefit from dense patches of preys, which represent a good adaptation to the high variability in food supply characteristic of polar environment. Copepodids stage III of Calanus spp. appeared to be the preferred preys of T. libellula. Smaller copepods such as Oithona similis and Pseudocalanus spp., were also selected but only when their relative abundance exceeded 25% of the total prey available. The potential predation impact of T. libellula is discussed in relation to the mesozooplankton small-scale patchiness and predator abundance.     

Massive floral display affects insect visits but not pollinator‐mediated pollen transfer in Rhododendron ferrugineum

Fragmentation of natural vegetation creates one of the largest threats to plant–pollinator interactions. Although fragmentation impacts on plant populations have been explored in many, mainly herbaceous, species, the response of wild mass‐flowering species is poorly known. Here, we studied 28 heathland patches dominated by the mass‐flowering shrub Rhododendron ferrugineum, each presenting different R. ferrugineum floral display sizes (total inflorescence number per patch) and patch isolation (median distance to the three nearest patches). We assessed the impacts of these two factors on (i) heathland patch visitor assemblage (considering R. ferrugineum versus surrounding community) and (ii) R. ferrugineum flower visitation rate and pollen transfer limitation (comparing seed set from emasculated to pollen‐supplemented flowers). We found that diversity and abundance of bees visiting R. ferrugineum in heathland patches significantly decreased with decreasing R. ferrugineum floral display, while overall visitor density per patch and flower visitation rate increased. Moreover, a decrease in massive floral display and increase in patch isolation resulted in reduced visitor density in the surrounding community. Even in patches with few individuals, we found disproportionate visitor abundance in R. ferrugineum compared to the surrounding community. Finally, pollen transfer limitation in R. ferrugineum was neither affected by visitation rate nor by patch attributes. By disproportionally attracting pollinators from co‐flowering species, and probably promoting geitonogamous pollen transfer, the mass‐flowering trait appears adequate to compensate, in terms of conspecific pollen transfer, for the decrease in visitor diversity and abundance and in mate availability, which usually result from population fragmentation.     

Annual Variation of Soil Respiration and Precipitation in a Temperate Forest (<Emphasis Type="Italic">Quercus serrata</Emphasis> and <Emphasis Type="Italic">Carpinus laxiflora</Emphasis>) Under East Asian Monsoon Climate

The consequence of changing pattern of precipitation on soil CO₂ emission is poorly understood in montane forest ecosystems under monsoon climate in Asia. In this paper, the results of 3-year field measurements are reported on the annual soil respiration (R _s) from a temperate deciduous broad-leaved forest (Quercus serrata and Carpinus laxiflora) in Korea, and its interannual variations are examined associated with changing precipitation. Based on biweekly chamber measurements from 2001 to 2004, the annual soil CO₂ emission averaged to be 7.8 t C ha⁻¹ with an annual variability of ∼20%. The soil temperature explained 22–97% of seasonal variations of R _s each year whereas the water-filled porosity (WFP) and precipitation pattern had a major effect on the observed interannual variation. The optimum values of WFP during the main growing season depended not only on the amount but also on the intensity and frequency of precipitation. These results indicate that the changes in catchment hydrology can significantly alter the carbon sink/source strength of forest ecosystems in monsoon Asia.     

Chlorophyll <Emphasis Type="Italic">a</Emphasis> as a measure of seasonal coupling between phytoplankton and the monsoon periods in the Gulf of Oman

We present data from a long time-series study to describe the factors that control phytoplankton population densities and biomass in the coastal waters of Oman. Surface temperature, salinity, nutrients, dissolved oxygen, chlorophyll a (Chl a), and phytoplankton and zooplankton abundance of sea water were measured as far as possible from February 2004 through February 2006, at two stations along the southern coast of the Gulf of Oman. The highest concentrations of Chl a (3 mg m⁻³) were recorded during the southwest monsoon (SWM) when upwelling is active along the coast of Oman. However, results from our study reveal that the timing and the amplitude of the seasonal peak of Chl a exhibited interannual variability, which might be attributed to interannual differences in the seasonal cycles of nutrients caused either by coastal upwelling or by cyclonic eddy activity. Monthly variability of SST and concentrations of dissolved nitrate, nitrite, phosphate, and silicate together explained about 90% of the seasonal changes of Chl a in the coastal ecosystem of the Gulf of Oman. Phytoplankton communities of the coastal waters of Oman were dominated by diatoms for most part of the year, but for a short period in summer, dinoflagellates were dominant.     

Population density and area: the role of between- and within-patch processes

The relationship between population density and the size of host plant patches was investigated for the red milkweed beetle Tetraopestetraophthalmus inhabiting unmanipulated patches of Asclepias syriaca. The resource concentration hypothesis proposes that density-area patterns, specifically that of increasing herbivore density with patch size, are primarily a function of movement between host plant patches. This research investigated the degree to which movement accounted for density-area patterns. Poisson regression analysis of beetle abundance versus milkweed patch size revealed that beetle density tended to increase with patch size. The pattern of density and patch size resulted from local reproduction and residence time. The density of emerging beetles tended to increase with patch size while emigration rates were unrelated to patch size. Immigration rates were constant with patch size for male beetles, and decreased with patch size for female beetles. Net flux of beetles (immigration – emigration) did not vary with patch size for male beetles and decreased with patch size for female beetles. Comparisons are made between this system and previously studied systems where movement plays a significant role in forming density area patterns. Additionally, several hypotheses are presented which may account for greater in situ recruitment and residence time in large patches. Received: 23 February 1996 / Accepted: 8 January 1997