Autotrophic carbon sources for heterotrophic bacterioplankton in a floodplain lake of central Amazon

The relative contribution of autotrophic carbon sources (aquatic macrophytes, flooded forest, phytoplankton) for heterotrophic bacterioplankton was evaluated in a floodplain lake of the Central Amazon. Stable carbon isotopes (¹³C) were used as tracers. Values of ¹³C of different autotrophic sources were compared to those of dissolved organic carbon (DOC) and those of bacterially produced CO₂.The percentage of carbon derived from C₄ macrophytes for bacterially produced CO₂ was the highest, on average 89%. The average ¹³C value of CO₂ from bacterial respiration was –18.5 ± 3.3. Considering a fractionation of CO₂ of 3 by bacterial respiration, ¹³C value was –15.5, near C₄ macrophyte ¹³C value (–13.1).The average value of total DOC ¹³C was –26.8 ± 2.4. The percentage of C₄ macrophytes carbon for total DOC was on average 17%. Considering that bacteria consume mainly carbon from macrophytes, the dominance of C₃ plants for total DOC probably reflects a faster consumption of the former source, rather than a major contribution of the latter source.Heterotrophic bacterioplankton in the floodplain may be an important link in the aquatic food web, transferring the carbon from C₄ macrophytes to the consumers.     

Length-weight relationship of fish species from Central Amazon floodplain

Length-weight relationship (LWR) for 39 freshwater fish species captured in the Catalão Lake, a floodplain area at the confluence of the Amazonas and Negro rivers is presented. LWRs were calculated based on fish sampled over 18 years (1999–2017) using a set of ten gill nets with different mesh sizes, monthly immersed in water for 24-hr with 6-hr interval catches. Measurements were done for standard length (SL – 0.1 cm precision) and total weight (TW – 0.01 g precision). The LWRs were calculated by the linear regression of natural log-transformed SL and TW data: TW = a × SL^b. All statistical analyses were performed with R software. From all species considered, 32 are new LWR records for the international literature as well as for the Amazonian ichythyofauna; additional records expand the known size range for seven species.     

Phytoplankton composition and abundance of a central Amazonian floodplain lake

The phytoplankton community of Lake Camaleão, a smallfloodplainlake influenced by a large whitewater river, the Solimões, was monthlyinvestigated for the composition and abundance of itsphytoplankton. The seasonal influence of the floodregime on biomass, species richness and diversity, andits relation with physical and chemical factors(temperature, pH, dissolved oxygen, electricalconductivity, total seston and inorganic nutrients)was analyzed and subjected to principal componentanalysis. Diversity was variable along the seasonalcycle: relatively high values were observed at the endof the dry season supported by high nutrientconcentrations. The phytoplankton was comprised of 262 taxa,with strong dominanceof euglenoids (81%). The three sample stations did not differamong each other, except in the dry season, due todata cluster in relation to theprincipal axis (1 and 2), explaining 63% of thevariation. Biomass accumulation as a function of lakearea reduction contributed to theseresults, indicating that the phytoplankton dynamicswere hydrology-driven.     

Seasonal changes in chlorophyll distributions in Amazon floodplain lakes derived from MODIS images

To assess seasonal changes in phytoplanktonic chlorophyll distributions in Amazon floodplain lakes, a linear mixing model was applied to Moderate Resolution Imaging Spectroradiometer (MODIS) reflectance data acquired at four river stages: rising (April), high (June), decreasing (September), and low (November). The study area is located in a floodplain reach from Parintins (Amazonas) to near Almeirim (Pará). A three-end-member mixing model designed to uncouple three fractions [high suspended inorganic matter (ip), low inorganic suspended matter (w), and high chlorophyll a (Chl)] was tested in Lake Curuaí (1.5°S 55.43°W) based on field sampling done almost concurrently with satellite overpasses. During high water, phytoplankton patches are confined to lakes closer to terra firme under the influence of clear water inflow, whereas during the low and decreasing water stages, the patches are more evenly distributed over the floodplain.     

Relationships between fish assemblages, macrophytes and environmental gradients in the Amazon River floodplain

During the flood season of 1992–1993, 139 species of fishes were collected from a floodplain lake system in the central Amazon Basin. Fish species distribution was examined relative to abiotic variables in seven vegetation strata on Marchantaria Island, Solimões River. Both environmental variables and species distributions were influenced by a river channel to floodplain-interior gradient. Species diversity was significantly higher in vegetated areas than in unvegetated areas, with deeper water Paspalum repens stands harbouring the highest diversity. As a result, species richness and catches were positively related to habitat complexity, while catch was also negatively related to dissolved oxygen (DO) and water depth. Low DO and shallow waters appeared to act as a refuge from predation. Fish assemblages were related to water chemistry, but species richness was not. Canonical correspondence analysis provided evidence that floodplain fish assemblages formed by the 76 most common species were influenced by physical variables, macrophyte coverage and habitat complexity, which jointly accounted for 67% of the variance of fish species assemblages. Omnivores showed no pattern relative to the river channel to floodplain-interior gradient while detritivores were more likely to be found at interior floodplain sites and piscivores closer to the river. Piscivores could be further separated into three groups, one with seven species associated with free-floating macrophytes in deep water, a second with five species found in shallow waters with rooted grasses and a third with six open water orientated species. The results suggest that fish assemblages in the Amazon floodplain are not random associations of species.     

Fisheries and the evolution of resource management on the lower Amazon floodplain

Traditionally, the ribeirinhoeconomy has been based on strategies of multiple resource use including agriculture, fishing, and small-scale stock raising. In the last two decades though, ribeirinhostrategies of resource management have undergone major changes due to the decline of jute production (the principal cash crop), and the intensification of the commercial fisheries. As a result of these trends, there has been a shift of ribeirinholabor from agriculture to commercial fishing. Today, the diversity which once characterized ribeirinhosubsistence strategies is disappearing, and fishing has become the primary economic activity for the great majority of varzeafamilies. As pressure on varzeafisheries has increased, ribeirinhocommunities have attempted to assert control over local varzealakes and exclude fishermen from outside the community. In a number of cases, ribeirinhocommunities have closed lakes to outsiders and established informal lake reserves under local community management. These lake reserves are a promising strategy for managing lake fisheries on a sustainable basis.     

Habitat associations of exploited fish species in the Lower Amazon river–floodplain system

1. Modification of floodplain morphology and land use is widely recognized as a major threat to fish communities of river–floodplain systems. We assess habitat associations of major exploited fish species in the Lower Amazon, where modifications are more extensive than in the Central or Upper Amazon. 2. Habitat was characterized in terms of physical environment, vegetation cover, distance from river and mean depth. Habitat associations of late juvenile and adult fish of the 14 major exploited species were established by comparing the distribution of the habitat sampled with the distribution of the habitat sampled weighed by a fish abundance index (catch per unit of effort). 3. Eight species showed significant habitat associations, generally being most abundant in floodplain lakes. Five of these eight species were associated with open water. Of the three exceptions, two preferred flooded forest lakes and another macrophyte‐dominated channels. The majority of those species with significant associations also preferred waters shallower than 7.25 m and relatively distant from the river mainstream. 4. While flooded forest is often assumed to be a key habitat for Amazon fish, only two of the main exploited species in the Lower Amazon had a significant association with this habitat. The majority of exploited species, including one that is associated with flooded forest in the central and upper Amazon, either showed no habitat associations or preferred open water lakes. The full range of pristine and modified floodplain habitats should be considered as important to fish conservation and fisheries productivity.     

Methane emissions from the Orinoco River floodplain, Venezuela

Methane emissions were measured over a 17-monthinterval at 21 locations on the Orinoco fringingfloodplain and upper delta (total area,14,000 km²). Emissions totaled 0.17 Tgyr^–1, or 7.1 mmol d^–1 (114 mg d^–1;standard deviation, ±18%) per m² of watersurface. Ebullition accounted for 65% of emissions. Emission rates were about five times as high forfloodplain forest as for open water or macrophytemats. Emission rates were positively correlated withcarbon content of sediment and amount of methane inthe water column, and negatively correlated withdissolved oxygen, but the correlations were weak. Emission from floodplain soils occurred only when thewater content of soil exceeded 25%, which occurredwithin 20 m of standing water during floodplaindrainage (3 months/yr). Bare soils emitted 60mmol/day per m of shoreline length; soils covered bystranded macrophyte beds emitted five times thisamount. Total emissions were accounted for primarilyby flooded forest (94%); macrophyte mats, open water,and exposed soils made only small contributions. Theflux-weighted mean ¹³C for the floodplainwas –62 ± 8; for D the mean was –271 ± 27. The ¹³C and D were negativelycorrelated. Overall emission rates were notably lowerthan for the Amazon. The depth and duration offlooding are considerably less for the Orinoco thanfor the Amazon floodplain; oxygen over sediments isthe rule for the Orinoco but not for the Amazon. TheOrinoco data illustrate the difficulty of generalizingemission rates. Current information for tropicalAmerica, including revised estimates for inundatedarea along the Amazon, indicate that methane emissionsfrom tropical floodplains have been overestimated.     

Nitrogen fixation by periphyton and plankton on the Amazon floodplain at Lake Calado

Nitrogen fixation by periphyton and plankton was measured on the Amazon flood-plain using the acetylene reduction method calibrated with¹⁵N-N₂. The average ratio (± SD) of moles C₂H₄ reduced per mole N₂-N fixed was 3.4 ± 0.7, similar to other studies. Periphyton and plankton had high rates of light-dependent nitrogen fixation, with dark nitrogen fixation averaging 26% of the average rates in the light. The average daily (24 h) rates for periphyton nitrogen fixation in 1989 and 1990 were 1.79 and 0.51 mmol N₂-N·m^–2·d^–1 respectively, which are comparable to summer rates in many temperate cyanobacterial assemblages. Nitrogen fixation was depressed at N0₃ ^– concentrations as low as 0.5 M, and was below detection limits at concentrations of 4 M, which occurred during periods of river flooding. Planktonic nitrogen fixation rates were high (0.5–0.8 mmol N₂-N·m^–2·d^–1) during the high-water and drainage phases of the annual hydrograph when the floodplain waters were draining towards the river (low NO₃ ^–), but rates were undetectable (< 0.05 mmol N₂-N·m^–2·d^–1) when there was river flooding (high NO₃ ^–). Nitrogen fixation by periphyton and plankton in 1989–1990 accounted for approximately 8% of previously reported total annual nitrogen inputs to the floodplain at Lake Calado.     

Transport of larval fish in the Amazon

In the Amazon near Manaus, larvae of Characiformes, Clupeiformes, Tetraodontiformes, Pleuronectiformes, Gymnotiformes, Belonidae and Sciaenidae were sampled in the river during most of the year, except in June and July, when the water level was at its maximum. Characiformes, Tetraodontiformes and Siluriformes were found in the ichthyoplankton mostly during the rising waters, but Clupeiformes and Sciaenidae drifted in the river almost all year around. Egg abundance was extremely low, suggesting that they do not drift or have a very short residence time. Two types of larval drift seemed to occur: a rising water drift and a lowering water drift. Characiformes, Tetraodontiformes and some Clupeiformes drifted mostly during the rising waters and were more abundant near the banks. Their strategy seemed to be a passive dispersion towards the floodplain with the flood pulse. The high densities near the banks optimized their chances of reaching a floodplain inlet. The groups that drifted during the lowering waters showed an alternative strategy. They were flushed from the floodplain lakes and may have stayed in the main river channel for a few months before returning to the floodplain. Predation in the lakes during the period when water level decline was probably the force behind this drift.     

High rates of net primary production and turnover of floating grasses on the Amazon floodplain: implications for aquatic respiration and regional CO2 flux

We investigated whether rates of net primary production (NPP) and biomass turnover of floating grasses in a central Amazon floodplain lake (Lake Calado) are consistent with published evidence that CO₂ emissions from Amazon rivers and floodplains are largely supplied by carbon from C4 plants. Ground‐based measurements of species composition, plant growth rates, plant densities, and areal biomass were combined with low altitude videography to estimate community NPP and compare expected versus observed biomass at monthly intervals during the aquatic growth phase (January–August). Principal species at the site were Oryza perennis (a C3 grass), Echinochloa polystachya, and Paspalum repens (both C4 grasses). Monthly mean daily NPP of the mixed species community varied from 50 to 96 g dry mass m^?2 day^?1, with a seasonal average (±1SD) of 64±12 g dry mass m^?2 day^?1. Mean daily NPP (±1SE) for P. repens and E. polystachya was 77±3 and 34±2 g dry mass m^?2 day^?1, respectively. Monthly loss rates of combined above‐ and below‐water biomass ranged from 31% to 75%, and averaged 49%. Organic carbon losses from aquatic grasses ranged from 30 to 34 g C m^?2 day^?1 from February to August. A regional extrapolation indicated that respiration of this carbon potentially accounts for about half (46%) of annual CO₂ emissions from surface waters in the central Amazon, or about 44% of gaseous carbon emissions, if methane flux is included.     

Methane and oxygen dynamics in a shallow floodplain lake: the significance of periodic stratification

Temperature, dissolved oxygen and dissolved methane profiles were measured during autumn and summer, in a shallow floodplain lake in south-eastern Australia to determine the effects of water-column stability on methane and oxygen dynamics. The water column was well mixed in autumn. Strong thermal stratification developed in the late afternoon in summer, with top-to-bottom temperature differences of up to 6 °C. Methane concentrations in surface waters varied over a daily cycle by an 18-fold range in summer, but only by a 2-fold range in autumn. The implication of short-term temporal variation is that static chambers deployed on the water surface for short times (less than a day) in summer will significantly underestimate the diffusive component of methane emissions across the water–atmosphere interface. There was a marked diel variation in dissolved oxygen concentrations in summer, with the highest oxygen values (commonly 5–8 mg l^–1) occurring in the surface waters in late afternoon; the bottom waters were then devoid of oxygen (< 0.2 mg l^–1). Because of high respiratory demands, even the surface water layers could be nearly anoxic by morning in summer. The concentration of dissolved oxygen in the surface waters was always less than the equilibrium value. When the water column became thermally stratified in summer, the dissolved oxygen and methane maxima were spatially separated, and planktonic methanotrophy would be limited to a moving zone, at variable depth, in the water column. In summer the whole-wetland rates of oxygen production and respiration, calculated from long-term (5 h) shifts in dissolved oxygen concentrations over a diel period, were approximately 6–10 and 3–6 mmol m^–3 h^–1, respectively. These values correspond to net and gross primary production rates of 0.7–1.2 and 1.0–1.9 g C m^–3 day^–1, respectively.     

Factors affecting growth rates of young tropical floodplain fishes: seasonality and density-dependence

Synopsis Deviations of growth increments from a model describing average growth of 12 common fish species, mostly juveniles, were compared with hydrological variables and biomass density (ranging from 1 gm^-2 to 83 gm^-2 of potentially competing species of similar size ranges (guilds). Seasonal effects on growth were highly significant for omnivores but not for detritivores. Omnivores exhibited faster growth during the rising water season, and higher growth rates were associated with periods of increased rates of flooding during this season, which could be associated with increased availability of food. No species exhibited density-dependent growth when all seasons were considered together. During the rising-water-level season, no inverse relationship between growth and biomass density was found in any of the 11 species tested at p = 0.05. During the short falling-water season, 2 of 8 species tested did exhibit density-dependent growth but a sign test of correlation coefficients from all species was not significant. These two significant results were from four omnivores tested. However, density-dependent growth was not indicated when the data were pooled within either detritivore or omnivore guilds by hydrological season. It was concluded that with the possible exception of juvenile omnivores during the limited falling-water season, density-dependent growth, and by implication interspecific competition, had no effect in regulating the species' populations investigated in the floodplain environment. Conversely, the importance of a seasonal hydrological regime in maintaining growth rates, at least for omnivores, was evident.     

Methane emissions from an Amazon floodplain lake: Enhanced release during episodic mixing and during falling water

Soil respiration rates vary significantly among major plant biomes, suggesting that vegetation type influences the rate of soil respiration. However, correlations among climatic factors, vegetation distributions, and soil respiration rates make cause-effect arguments difficult. Vegetation may affect soil respiration by influencing soil microclimate and structure, the quantity of detritus supplied to the soil, the quality of that detritus, and the overall rate of root respiration. At the global scale, soil respiration rates correlate positively with litterfall rates in forests, as previously reported, and with aboveground net primary productivity in grasslands, providing evidence of the importance of detritus supply. To determine the direction and magnitude of the effect of vegetation type on soil respiration, we collated data from published studies where soil respiration rates were measured simultaneously in two or more plant communities. We found no predictable differences in soil respiration between cropped and vegetation-free soils, between forested and cropped soils, or between grassland and cropped soils, possibly due to the diversity of crops and cropping systems included. Factors such as temperature, moisture availability, and substrate properties that simultaneously influence the production and consumption of organic matter are more important in controlling the overall rate of soil respiration than is vegetation type in most cases. However, coniferous forests had 10% lower rates of soil respiration than did adjacent broad-leaved forests growing on the same soil type, and grasslands had, on average, 20% higher soil respiration rates than did comparable forest stands, demonstrating that vegetation type does in some cases significantly affect rates of soil respiration.     

Trophic opportunism of central Amazon floodplain fish

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Responses of the fish community to the flood pulse and siltation in a floodplain lake of the Trombetas River,Brazil

The distributions of the fish species were examined in relation to environmental variables, to evaluate the effects of environmental degradation on the fish community of Batata Lake, a typical Amazonian clearwater lake. From 1979 to 1989, tailings composed of water and clay, extracted from bauxite by water jets, were discharged into Batata Lake. The tailings spread into about 30% of the lake’s area, where the level of the lake bottom rose and turbidity increased. In the present study, multivariate analyses were performed on data for environmental parameters and fish density and biomass. Fish were collected with gillnets during the annual hydrological cycle (filling, flood, drawdown and dry periods), in the silted area, the partly silted area (intermediate) and the natural area. Values of the Shannon index, density and biomass were compared among areas and periods to evaluate the effects of the tailings on community structure. Sediment resuspension, which reduces transparency, is accentuated in shallow water, and was the main factor regulating differences in the community structure between the natural and silted areas. The decrease in transparency occurs mainly during the filling period in the silted area and during the low-water period in the silted and intermediate areas, when sediment resuspension increases concentrations of nutrients and chlorophyll-a. The strong influence of migratory and piscivore species in low-transparency waters is likely associated with the greater bacterioplankton productivity and turnover rate observed by other authors in the silted area, increasing the importance of the heterotrophic food chain in Batata Lake. Reduction of transparency in the silted area was a selective factor for fish species. The death of part of the flooded forest vegetation was decisive in lowering densities of the igapó-associated species in the silted area. The unconsolidated substrate, the death of part of the igapó forest and the negative effects of low transparency – inhibiting resident visually oriented species in the affected areas – are the main factors causing the low diversity in the silted area as a whole. The correlations between CPUEs, conductivity and nutrients and chlorophyll-a concentrations do not appear to reflect cause–effect relationships, indicating that these environmental parameters are poor predictors of fish density in Batata Lake.     

Ammonium and phosphate regenerationby the zooplankton of an Amazon floodplain lake

SUMMARY. 1. Regeneration of ammonium and phosphate by macro-zooplankton (Cladocera. adult copepods. and copepodites) was measured in Lake Calado. an Amazon floodplain lake, Macrozooplanktonabundances ranged between 1×10⁴ and 3×10⁵ individuals m⁻².
2. Phosphate regeneration ranged from 0.2 to 1.3 μ mol PO₄ m⁻² b⁻¹at station 1. located 2 km from the Solimoes River, and from 1.6 to8.3 μ mol PO₄ m⁻² h ⁻¹ at station 3, located 7 km from the SolimoesRiver. Ammonium regeneration at stations 1 and 3 ranged from 1.7 to11.9 and from 13.4 to 77.2 μ mol NH₄ m⁻² h⁻¹. respectively.
3. Zooplankton regenerated ammonium and phosphate at similarrates during rising and falling waier. Regeneration by macrozooplankton was low compared to other tropical lakes and compared to microbesand microzooplankton in Lake Calado.     

Regeneration and uptake of ammonium by plankton in an Amazon floodplain lake

Planktonic regeneration and uptake of ammonium was measuredin Lake Calado on the floodplain of the Amazon River (Brazil).In the epilimnion of the lake, regeneration and uptake averaged0.86 ± 0.15 and 1.9 ± 0.4 µmol NH₄1^–1h^–1 respectively. Uptake exceeded regeneration under theammonium-enriched conditions of our experimental incubations,but uptake and regeneration are in near-balance at in situ ammoniumconcentrations of <1 µM. In experiments that simulatedlake overturn, samples from the meta- and hypolimnion had higherrates of regeneration (1.4 ± 0.6) and lower rates ofuptake (0.89 ± 0.53) than epilimnetic samples. Duringinflow of water from the Amazon River and a local stream, ammoniumregeneration rates were similar to those measured in the epilimnion(0.84 ± 0.22), but the uptake rates were lower (0.49± 0.13). Although regeneration always exceeded uptakein the overturn and inflow experiments, ammonium did not accumulate.Rapid isotope dilution of the ammonium pool occurred in theincubations, and the effect of not accounting for isotope dilutioncould result in underestimating uptake rates by a factor of2–5 in the epilimnion of this tropical lake.     

Nitrogen dynamics in seasonally flooded soils in the Amazon floodplain

Large areas of the Amazon are subject to seasonal flooding due to water level changes of the river. This flood pulse causes rapidly changing conditions for microorganisms living in the soils which affects the cycling of nitrogen in the ecosystem. An understanding of the nitrogen dynamics in the seasonally flooded soils is essential for the development of productive and sustainable management concepts. We measured nitrogen concentrations, denitrifier enzyme activity (DEA), cell numbers of nitrifying and denitrifying bacteria, respiration, pH and total carbon in the seasonally flooded soils over one entire annual hydrological cycle. By comparing three sites with different vegetation (forest, aquatic macrophyte stand and bare sediment with annual herbs) we assessed the effect of vegetation on soil nitrogen dynamics. Inorganic nitrogen was always dominated by ammonium indicating reduced conditions in the soil even during the terrestrial phase. Although conditions were generally poor for nitrification we observed high numbers of nitrifying bacteria between 10⁴ and 10⁷cells g^–1. Pulses of ammonium as well as high DEA were observed during the transition periods between aquatic and terrestrial phase. Thus the alternation between aquatic and terrestrial phase promotes nitrogen mineralization and denitrification in the soils. There were no plausible correlations between microbial activities and numbers with soil physical or chemical parameters except a relation between the numbers of nitrate reducing bacteria and soil moisture (R² = 0.81) and ammonium (R² = 0.92) at one site. This shows the complex regulation patterns in this habitat. Different vegetation did not alter the general patterns of nitrogen dynamics but the absolute extend of fluctuations. We conclude that both the soil physical and chemical changes directly caused by the flood pulse and the vegetation have a great impact on microbial nitrogen turnover in the soils. The effects of the flood pulse can be buffered by a fine soil texture or a litter layer which prevents desiccation of the soil during the terrestrial phase.     

Nitrate and ammonium uptake by plankton in an Amazon River floodplain lake

Uptake of ammonium and nitrate by plankton was measured in tropicalLake Calado, Brazil. Nitrate uptake was strongly influencedby light and was light saturated at {small tilde}340 µEm^–2 s^–1. In contrast, uptake of ammonium was lessinfluenced by light, and saturated at {small tilde}250 µEm^–2 s^–1. Uptake rates of both forms of nitrogenwere inhibited by up to 80% at light intensities higher thanthose required for saturation. Concentrations of ammonium andnitrate also had a strong influence on uptake rates. Half-saturationconstants (0.3–5 µM) were usually greater than ambientconcentrations (0.1–0.6 µM), indicating that uptakerates at ambient concentrations were less than one-half of thesaturated rates. Ammonium is the more important type of inorganicnitrogen for plankton of Lake Calado because nitrate concentrationsremain low to undetectable except during periodic inputs ofnitrate-rich water from the Amazon River. Using the observeddependence of uptake on concentration and light, maximum uptakerates per unit chlorophyll were computed to be in reasonableagreement with rates derived from P^B_m values for carbon uptake. ¹ Present address: Florida Department of Natural Resources,Marine Research Laboratory, St Petersburg, FL 33701, USA