Conservation status of parrot populations in an Atlantic rainforest area of southeastern Brazil

A census of four species of syntopic parrots was carried out using distance sampling methods on São Sebastião island, SE Brazil. Most of the 33593 ha island is covered by mature and secondary Atlantic rainforest. Almost 80% of these forests are within the Ilhabela Park. Although the species counted have marked differences in size and weight, density (individuals/km²) and estimated population size in 23500 ha of well-preserved forests were similar: Amazona farinosa (13.82±5.94; 3247±1395), Pionus maximiliani (15.79±7.04; 3712±1654), Brotogeris tirica (15.05±4.87; 3537±1143) and Pyrrhura frontalis (13.06±5.53; 3068±1298). Encounter rates of Forpus crassirostris and Pionopsitta pileata were very low, which suggests that there is only a small population of these species on the island. The São Sebastião forests still support healthy populations of parrots. Although woodpecker population estimates on the island are large enough to provide nesting sites for parrots, competition for holes with other secondary cavity nesters such as toucans, flycatchers and tytiras, and the selective cutting of dead trees for canoe construction, which is a common practice on the island, may limit hole availability for parrots.     

Richness and diversity of sand flies (Diptera,Psychodidae) in an Atlantic rainforest reserve in southeastern Brazil

Our objective was to study and evaluate the richness and diversity of Phlebotominae fauna in the Duas Bocas Biological Reserve (DBBR) in the state of Espírito Santo, in southeastern Brazil. Sand fly collections were carried out during four consecutive nights each month between August 2007 and July 2008 at DBBR by using CDC automatic light traps and an illuminated Shannon trap. Specific richness (S) and Shannon diversity index (H) was calculated for each trap. We collected 18,868 sand flies belonging to 29 species and 13 genera. Nyssomyia yuilli yuilli was the most abundant species followed by Psychodopygus ayrozai, Ps. hirsutus, Psathyromyia pascalei, and Ps. matosi. We recorded Brumptomyia cardosoi, Br. troglodytes, and Ps. geniculatus for the first time in the state of Espírito Santo. We discuss the differences in diversity and richness of the sand flies in both traps and in relation to other Brazilian localities and biomes. We also discuss the possibility of wild transmission of Leishmania in the DBBR and the influence of the sand fly species in leishmaniasis transmission to the adjacent areas of the reserve.     

Small mammal populations of an agroecosystem in the Atlantic Forest domain, southeastern Brazil.

This study reports 2 years of the population dynamics and reproduction of a small mammal community using the removal method. The study was conducted in a rural area of the Atlantic Forest, in Sumidouro, Rio de Janeiro State, Brazil. The population sizes, age structure and reproduction were studied for the four most common species in the study area. The overall diversity was 1.67 and ranged between 0.8 to 1.67. The species richness was 13 considering the whole study. The most abundant species were the rodents Nectomys squamipes (n = 133), Akodon cursor (n = 74), Oligoryzomys nigripes (n = 25) and the marsupials Didelphis aurita (n = 58) and Philander frenatus (n = 50). Seven other rodents were captured once: Necromys lasiurus, Akodon montensis, Sooretamys angouya, Oecomys catherine, Oxymycterus judex, Euryzygomatomys spinosus and Trinomys iheringi. There were higher peaks for diversity and species richness during the winter (dry) months, probably due to higher food availability. The marsupials had a seasonal reproduction with highest population sizes at the end of the rainy seasons. Nectomys squamipes reproduced mostly during rainy periods. Akodon cursor reproduced predominantly in the winter with the highest population peaks occurring during this season. The analysis of the population dynamics of the rodent species indicated that no species behaved as an agricultural pest, probably due to the heterogeneous landscape of high rotativity of vegetable cultivation. Rodent populations were more susceptible to the removal procedure than marsupial ones.     

Habitat structure and disturbance affect small mammal populations in Mediterranean forests

Habitat structure, the physical arrangement of objects in space, affects animal populations, ecological interactions, species diversity, and ecosystem functioning. Conventional forest management practices that reduce habitat structural complexity are thus under reappraisal, and there are increasing efforts to understand how habitat structure affects functionally important species. We investigate here the effect of habitat structures on small mammal dens and their interactions with widespread antagonistic species (wild boars). Among habitat structures we considered tree dimension (diameter), shrub cover, rock cover, dead wood volume, and stump area. Ground cover with rooting signs measured wild boar disturbance. The number of small mammal dens was related positively to rock cover and tree diameter, and negatively to wild boar disturbance. Additionally, a positive interaction between wild boar disturbance and tree diameter emerged, showing that the effect of big trees on small mammal nesting was more evident with higher levels of disturbance. This study suggests that habitat structures that can be affected by forest management provide effective refuges for functionally important species. The effect of habitat structure on species survival and interactions thus needs to be addressed to understand ecosystem management and functioning.     

Reproductive cycle of Pitcairnia flammea Lindl. (Bromeliaceae/Pitcairnioideae) in an insular Atlantic rainforest area in southeastern Brazil

We studied for 6 years the reproductive cycle of the bromeliad Pitcairnia flammea in the Atlantic Rainforest of Ilha Grande, an island located in the south of Rio de Janeiro state, southeastern Brazil. We marked 150 adult individuals of the species, for which we monthly observed the occurrence of reproductive characteristics. The phenological attributes were related to environmental factors such as photoperiod, rainfall and temperature. Additionally, we estimated a mortality rate that was related to the rainfall in the area. P. flammea possesses a seasonal reproduction pattern, with a relatively fixed and well-defined time span during the winter dry period; flowering precedes fruiting by approx. 1 month. Due to the occurrence of P. flammea preferably on boulders of river channels and banks mortality of the plants is highest when floods from strong rainfall remove the plants mechanically from their growing places.     

Composition and trophic structure of a fish community of a clear water Atlantic rainforest stream in southeastern Brazil

As part of a larger project that aimed to determine the factors that regulate fish productivity in a clear water river of the Atlantic rainforest, São Paulo State, Brazil, composition and the trophic structure of the fish community of the middle course of the river were studied from January 1995 to May 1996. Of the 17 species collected, Mimagoniates microlepis, Schizolecis guentheri, Phalloceros caudimaculatus and Kronichthys heylandi accounted for 83.2% of the total fish abundance. Most of the species were insectivorous (35.7%), followed by detritivores (21.4%), benthivores (14.2%), omnivores (14.2%), herbivores (7.1%), and piscivores (7.1%). Results of food overlap analysis as calculated by the Index of Morisita showed that 17.5% of the species pairs overlapped. Habitat segregation, however was observed among most of the species, suggesting some degree of food partitioning. Despite the characteristics of this escarpment river, which produces spates year round, no seasonal variation in diet was observed, suggesting that although food abundance may fluctuate throughout the year, most items are in constant supply. The importance of allochthonous food was considered and it appears that, though only a few species feed on this source (including detritivores), they make up 87.2% of the total fish abundance. The low abundance of most of the fishes, the high number of endemic species and the strong dependence of the species on a few food resources suggest that these systems are sensitive to anthropogenic impacts and require future studies.     

A methodological approach to assess the small mammal community diversity in the temperate rainforest of Patagonia

Assessing small mammal diversity is a common procedure, which usually employs widespread standard techniques, for gathering information for a wide range of studies. Traditional methods, however, may be biased against capturing arboreal marsupials, such as Dromiciops gliroides, an endemic marsupial currently considered a rare species in the Patagonian temperate rainforest due to the low abundances reported previously. I tested a new capturing methodology to assess the small mammal diversity of an old-growth forest in Patagonia, based on a randomized and balanced design, which incorporated a combination of different trap types, bait types, and placement heights. The proposed methodology included four trap types (two for live-capturing: wire-mesh and Sherman traps, and two sign-recording traps for tracks and hair), two types of bait (banana and rolled oats), and two trap placements (ground level and 1.5–2.5 m above the ground). Trap type, bait type, and height of placement all had significantly different effects on capturing and detecting rodents or marsupials; environmental variables at the trap location also affected the ability to detect rodents and marsupials. Traditional methods used for sampling small mammals performed well for rodents but are not effective for capturing marsupials and vice versa, showing species-specific sampling protocols. There is no single combination of trap-bait-height capable to assess the entire small mammal community, but the combination of the most effective protocol for rodents and the most effective protocol for marsupials guarantee better results.     

Host-ectoparasite specificity in a small mammal community in an area of Atlantic Rain Forest (Ilha Grande, State of Rio de Janeiro), Southeastern Brazil

The analyses of the ectoparasite species associated with a small mammal community on Ilha Grande, a coastal island in southern of the state of Rio de Janeiro, Brazil, evaluated the level of host-ectoparasite specificity. Was used the Jaccard index for qualitative data to analyse the similarity. The lowest value of similarity occurred between Proechimys iheringi and Marmosops incanus and between Sciurus aestuans and Nectomys squamipes (Cj=0.08) and the highest between P. iheringi and Oxymycterus sp. (Cj=0.33). This index showed a low value of similarity across the ectoparasite community. The only exception from this pattern of high host specificity occurred with P. iheringi and Oxymycterus sp., which shared five species of ectoparasites. The similarity values, for most of the cases, is smaller than 0.2.     

Efficiency of sampling methods for accurate estimation of species richness of corticolous microlichens in the Atlantic rainforest of northeastern Brazil

Three different sampling methods were compared with regard to accurate estimation of species richness of crustose and microfoliose lichens in Atlantic rainforest remnants of northeastern Brazil. Quantitative transect sampling yielded three times as many species as non-quantitative opportunistic sampling, even if the number of sampled phorophyte trees was higher on average for the latter method. Repetitive non-quantitative opportunistic sampling of a single site resulted in twice the number of species than one-time sampling, but only two thirds of the number recovered by means of quantitative transect sampling, even of the number of sampled phorophyte trees was highest for this method. The analysis showed that opportunistic sampling fails to detect rare, inconspicuous, sterile, and/or cryptic species, usually neglected or overlooked even by the experienced collector upon visual inspection in the field. On the other hand, quantitative sampling forces even the inexperienced collector to sample lichen thalli or pieces of bark which only after detailed morphological, anatomical, and chemical study in the laboratory reveal themselves as distinct species. Accordingly, of the 456 lichen species collected and identified across the 22 studied localities, no less than 76 were unique to the quantitatively sampled transect, and the lichen species sampled with this method had a significantly higher proportion of rare, inconspicuous, sterile, and/or cryptic species. It is also apparent that it is not the higher number of specimens collected via quantitative sampling that results in a higher number of species, but the method of selection of the specimens, which is subjective and biased towards abundant, conspicuous, fertile and/or distinctive species in opportunistic sampling, but objective and unbiased in quantitative sampling.     

Plant and small mammal richness correlate positively in a biodiversity hotspot

Hotspots of biodiversity are important areas in facilitating an understanding of species richness and its maintenance. Herbivores can increase plant richness by reducing dominant plant species thus providing space for subdominant species. As small mammals are abundant in the Succulent Karoo and therefore might affect plant richness by means of herbivory, we tested if this mechanism might exist in the Succulent Karoo in southern Africa, a biodiversity hotspot due to its extraordinary plant richness. At ten ecologically different study sites we measured plant and small mammal richness and diversity and determined 11 abiotic factors including soil composition, altitude and rainfall. We found positive correlations between plant richness and the number of small mammal species. A general linear model revealed that the number of small mammal species was more important than abiotic factors in explaining variation in plant richness. To test whether small mammals might directly influence plant richness, we studied the influence of the bush-Karoo rat Otomys unisulcatus, a central place forager, on the plant community. The immediate surroundings of occupied O. unisulcatus nests showed significantly higher plant richness than control areas. We conclude that small mammals can have a positive effect on plant richness in the Succulent Karoo. While experimental data are needed to support these correlative results, the results of our study indicate that areas of high small mammal richness should be included in conservation programs of the Succulent Karoo.     

Lower richness of small wild mammal species and chagas disease risk

A new epidemiological scenario involving the oral transmission of Chagas disease, mainly in the Amazon basin, requires innovative control measures. Geospatial analyses of the Trypanosoma cruzi transmission cycle in the wild mammals have been scarce. We applied interpolation and map algebra methods to evaluate mammalian fauna variables related to small wild mammals and the T. cruzi infection pattern in dogs to identify hotspot areas of transmission. We also evaluated the use of dogs as sentinels of epidemiological risk of Chagas disease. Dogs (n = 649) were examined by two parasitological and three distinct serological assays. kDNA amplification was performed in patent infections, although the infection was mainly sub-patent in dogs. The distribution of T. cruzi infection in dogs was not homogeneous, ranging from 11–89% in different localities. The interpolation method and map algebra were employed to test the associations between the lower richness in mammal species and the risk of exposure of dogs to T. cruzi infection. Geospatial analysis indicated that the reduction of the mammal fauna (richness and abundance) was associated with higher parasitemia in small wild mammals and higher exposure of dogs to infection. A Generalized Linear Model (GLM) demonstrated that species richness and positive hemocultures in wild mammals were associated with T. cruzi infection in dogs. Domestic canine infection rates differed significantly between areas with and without Chagas disease outbreaks (Chi-squared test). Geospatial analysis by interpolation and map algebra methods proved to be a powerful tool in the evaluation of areas of T. cruzi transmission. Dog infection was shown to not only be an efficient indicator of reduction of wild mammalian fauna richness but to also act as a signal for the presence of small wild mammals with high parasitemia. The lower richness of small mammal species is discussed as a risk factor for the re-emergence of Chagas disease.     

Occasional intraguild predation structuring small mammal assemblages: the marsupial Didelphis aurita in the Atlantic Forest of Brazil

The didelphid marsupial, Didelphis aurita, is suggested as an intraguild predator and as key‐species in small mammal assemblages of the Atlantic Forest of Brazil. The field experiments required to test this hypothesis are complex to implement, but the recent revival of regression methods offers a viable alternative. Here we use the dynamic and static regression methods to determine the importance of D. aurita as a competitor and intraguild predator. Capture–recapture data from two localities in the Rio de Janeiro State were used, Garrafão (municipality of Guapimirim), a coastal forest of the Serra do Mar, and Barra de Maricá, a costal sand dune vegetation. Population and microhabitat variables were monitored from April 1997 to April 2003 in Garrafão, and from January 1986 to July 1990 in Barra de Maricá. Microhabitat variables were related to Canopy, Plant, Litter and Rock covers, Obstruction from 0 to 1.5 m, and Number of logs. Exploitation competition was tested by the dynamic method, which models the effects of D. aurita on the per capita growth rate of a species. Interference by predation or competition was tested by the static method, where the abundance of D. aurita at trap stations was regressed against the abundance of other small mammals, after removal of any variation associated with microhabitat factors. Exploitation competition was not detected, but the interference of D. aurita was pervasive, affecting all small mammals studied in the two localities. The clear avoidance of D. aurita by all small mammals tested in two localities of different physiognomies indicates that it functions as an intraguild predator, even if actual predation by D. aurita is an occasional event.     

Meta‐analysis of the effects of small mammal disturbances on species diversity,richness and plant biomass

The disturbance activities of many small mammals, including building burrows, mounds, trails and tunnels, and herbivory, can have significant impacts on their ecosystems, both through trophic and non‐trophic interactions. Some species have large enough impacts through their disturbances to be classed as ecosystem engineers and/or keystone species. Others have negative or null effects. However, at present it is difficult to predict whether the disturbances created by a given species will have significant effects on common measures of ecosystem response such as species richness, diversity and biomass. We ask whether variables characterizing disturbance type, responding species, disturbance‐making species and the environment can predict changes in magnitude and direction of effects on biomass, richness and diversity. We test these predictions with a meta‐analysis of 106 data entries in a database derived from 63 papers, representing 40 small mammal species. We find that small mammal disturbances in general increase biomass, and both increase and decrease richness and diversity. We also identify individual environmental, disturbance‐related, and species‐related variables associated with these changes in magnitude and direction. We discuss the likely interactions between these variables, and how current proxy measures of disturbance impact could be replaced by more accurate direct measures. We recommend that future studies focus on conditions characterized by combinations of variables we identify as significant, in order to understand how these variable interactions (which cannot be analysed through meta‐analysis) affect disturbance outcomes. Based on the gaps in our database and results, we also recommend that future studies directly measure disturbance impact, measure disturbance effects on animal and well as plant taxa, and take measurements on multiple scales.     

Orchid bee fauna (Hymenoptera: Apidae: Euglossina) of Atlantic Forest fragments inside an urban area in southeastern Brazil

Male orchid bees were collected by chemical baiting in four forest fragments in parks of the city of Belo Horizonte, Minas Gerais, southeastern Brazil. One thousand three hundred and twenty-five males belonging to 14 species were captured within one year. The capture data were compared through correlation tests. The data suggest that abundance of orchid bees tend to increase with fragment size, although no correlation between species richness and fragment size was obtained. The results presented herein suggest that forest fragments in a large city may be of importance concerning conservation of orchid-bee faunas.     

Understanding the threats to biological diversity in southeastern Brazil

Habitat destruction and the over-exploitation of species are perhaps thetwo most important processes threatening biodiversity. Whilst the growing humanpopulation puts considerable pressure on biological resources, a number ofsocial and economic factors tend to augment over-exploitation of theseresources. Here we show that the over-exploitation of the tropical palm treeEuterpe edulis Mart., as a consequence of social problems,has contributed significantly to its extinction in several forest fragments andalso to the disappearance of many wild animal species which used to be found inareas of the Atlantic Rain Forest (Brazil). Some of these species have been lostas a direct result of people hunting the animals when they went harvestingE. edulis while others disappeared as a consequence of thedecrease in food availability or by alterations in the trophic structure.     

Factors determining mammal species richness on habitat islands and isolates: habitat diversity, disturbance, species interactions and guild assembly rules

• 1 For over three decades the equilibrium theory of island biogeography has galvanized studies in ecological biogeography. Studies of oceanic islands and of natural habitat islands share some similarities to continental studies, particularly in developed regions where habitat fragmentation results from many land uses. Increasingly, remnant habitat is in the form of isolates created by the clearing and destruction of natural areas. Future evolution of a theory to predict patterns of species abundance may well come from the application of island biogeography to habitat fragments or isolates.
• 2 In this paper we consider four factors other than area and isolation that influence the number and type of mammal species coexisting in one place: habitat diversity, habitat disturbance, species interactions and guild assembly rules. In all examples our data derive from mainland habitat, fragmented to differing degrees, with different levels of isolation.
• 3 Habitat diversity is seen to be a good predictor of species richness. Increased levels of disturbance produce a relatively greater decrease in species richness on smaller than on larger isolates. Species interactions in the recolonization of highly disturbed sites, such as regenerating mined sites, is analogous to island colonization. Species replacement sequences in secondary successions indicate not just how many, but which species are included. Lastly, the complement of species established on islands, or in insular habitats, may be governed by guild assembly rules. These contributions may assist in taking a renewed theory into the new millennium.

     

Habitat loss and anthropogenic disturbance in Jamaica's Hellshire Hills area

This study provides empirical assessments of the magnitude of human pressures on forest habitat in Jamaica's Hellshire Hills. The Hellshire Hills represents an outstanding example of the Caribbean region's dry limestone forests. Approximately 160 km² in area, the Hellshire Hills is home to a unique and rich biodiversity, including the critically endangered Jamaican Iguana (Cylcura collei). The area's biodiversity is under increasing threat from deforestation from subsistence driven encroachment. Using deforestation as a spatial indicator of habitat loss, the study derives satellite based estimates of the rate of habitat destruction within and immediately outside the area. The underlying human driving forces in this destruction are analyzed in a regression analysis of key socio-economic indicators that adusts for these locational differences. Results suggest that immiserating pressures on species habitat, particularly outside the area, are greater than anywhere else on the island. Simulations of species loss and edge-induced disturbances to species habitat also indicate that the potential impacts of forest conversion may be substantial and extend well beyond the area's boundaries. Together, the study's results highlight the intrinsic vulnerablity of the Hellshire Hills to outside disturbance. In particular, they raise doubts about the potential of the area (which has been accorded protected status within the recently established Portland Bight Protected Area) to provide for the long-term preservation and viability of the area's species. It is concluded that appropriate reserve design and species protection will require the collection of detailed empirical data on species diversity, numbers, habitat requirements, and spatial distribution. However, before this information can be collected priorities for biodiversity conservation must be set. Costs and benefits of conversation must also be assessed within the overall context of an integrated rural development plan for the area.