油菜种子发育早期的油体发生与调控

以甘蓝型油菜（Brassica napus L.）品种‘Westar’和‘Topas’为材料,通过超微结构观察和荧光定量PCR技术对油菜胚胎发育早期油体的发生、油体蛋白及脂肪酸合成转录因子基因的表达情况进行分析。结果显示：油体出现在油菜胚胎发育早期,在授粉9~11 d后（球形胚时期）的胚体和胚柄中均存在直径小于0.5 μm的油体;荧光定量实验结果表明,除BnCLO3的表达量在整个胚胎发育阶段无明显变化外,其他油体蛋白基因Oleosins、Steroleosins和BnCLO1的表达量在心形胚时期就明显增多并持续增长;脂肪酸合成转录因子BnLEC1、BnL1L、BnWRI1和BnFUS3在胚胎发育阶段,基因表达规律均呈先上升再下降的趋势,但达到最高值的时间存在差异,其中BnLEC1最早,BnL1L其次,BnWRI1和BnFUS3较晚。研究结果表明甘蓝型油菜在球形胚时期出现油体,其结构蛋白和转录调控因子基因的表达自心形胚开始明显增多。     

甘蓝型油菜扩展蛋白家族的全基因组鉴定及其对缺硼胁迫响应的差异分析

以甘蓝型油菜(Brassica napus L.)硼高效品种‘青油10号’和硼低效品种‘Westar 10’为研究对象,采用生物信息学分析、转录组测序和实时荧光定量PCR技术,鉴定其基因组中扩展蛋白的家族成员,并对该基因家族响应缺硼胁迫的表达差异进行分析。结果显示,甘蓝型油菜基因组中包含109个扩展蛋白,可分为4个亚家族,包括:79个扩展蛋白A(BnaEXPAs)、21个扩展蛋白B(BnaEXPBs)、5个类扩展蛋白A(BnaEXLAs)和4个类扩展蛋白B(BnaEXLBs)。同一亚家族中的扩展蛋白具有相对保守的基因结构和蛋白质基序组成。这些扩展蛋白基因分布在19条染色体上,其中10个位于硼高效QTL区间内。转录组测序分析结果表明,缺硼胁迫时‘青油10号’的根、幼叶和老叶中分别有40、18和30个扩展蛋白基因显著上调或下调表达;而‘Westar10’中分别有27、24和41个扩展蛋白基因显著上调或下调表达。其中‘青油10号’根中的BnaC04.EXPA6a,幼叶中的BnaA09.EXPA5以及老叶中的BnaA09.EXPA16、BnaC04.EXPA3、BnaCnn.EXPA5b和BnaA03.EXPA8基因的表达水平均显著高于‘Westar10’。研究结果说明甘蓝型油菜基因组中扩展蛋白基因家族数量庞大,其中高、低效品种间和不同硼水平中差异表达的扩展蛋白可能在甘蓝型油菜低硼适应性中发挥重要作用。     

甘蓝型油菜扩展蛋白家族的全基因组鉴定及其对缺硼胁迫响应的差异分析（英文）

以甘蓝型油菜(Brassica napus L.)硼高效品种‘青油10号’和硼低效品种‘Westar 10’为研究对象,采用生物信息学分析、转录组测序和实时荧光定量PCR技术,鉴定其基因组中扩展蛋白的家族成员,并对该基因家族响应缺硼胁迫的表达差异进行分析。结果显示,甘蓝型油菜基因组中包含109个扩展蛋白,可分为4个亚家族,包括:79个扩展蛋白A(Bna EXPAs)、21个扩展蛋白B(Bna EXPBs)、5个类扩展蛋白A(Bna EXLAs)和4个类扩展蛋白B(Bna EXLBs)。同一亚家族中的扩展蛋白具有相对保守的基因结构和蛋白质基序组成。这些扩展蛋白基因分布在19条染色体上,其中10个位于硼高效QTL区间内。转录组测序分析结果表明,缺硼胁迫时‘青油10号’的根、幼叶和老叶中分别有40、18和30个扩展蛋白基因显著上调或下调表达;而‘Westar10’中分别有27、24和41个扩展蛋白基因显著上调或下调表达。其中‘青油10号’根中的Bna C04.EXPA6a,幼叶中的Bna A09.EXPA5以及老叶中的Bna A09.EXPA16、Bna C04.EXPA3、Bna Cnn.EXPA5b和Bna A03.EXPA8基因的表达水平均显著高于‘Westar10’。研究结果说明甘蓝型油菜基因组中扩展蛋白基因家族数量庞大,其中高、低效品种间和不同硼水平中差异表达的扩展蛋白可能在甘蓝型油菜低硼适应性中发挥重要作用。     

海岛棉WOX9基因(GbWOX9)的克隆及表达模式分析

[目的]WOX9基因在植物的胚胎发育过程中发挥一定作用。[方法]根据已公布的雷蒙德氏棉WOX9基因序列的CDS设计一对引物,从海岛棉‘新海16’中克隆一个同源基因GbWOX9。通过实时荧光定量分析其在棉花体细胞胚不同阶段的表达模式。[结果]获得了1 038 bp的GbWOX9基因的开放阅读框(ORF),编码345个氨基酸,预测蛋白分子量约为38 264.54 k Da,等电点为6.7。通过结构域分析,发现GbWOX9中含有一个由65个氨基酸组成的保守同源异型结构域。系统进化树分析结果表明GbWOX9与亚洲棉Ga WOX9亲缘关系较近。亚细胞定位预测该基因可能定位于细胞核。qRT-PCR表明,GbWOX9基因的表达量在‘新海16’胚胎发育阶段的球形胚鱼雷胚心形胚胚性愈伤。[结论]根据相对表达量数值估算,GbWOX9在球形胚的表达量是鱼雷胚的1.3倍,是心形胚的3.1倍,是胚性愈伤的5.2倍。故该基因在‘新海16’体细胞胚阶段的球形胚中表达量最高。     

应用基因芯片分析甘蓝型油菜柱头特异表达基因

以甘蓝型油菜(Brassica napus)野生型(宁油10号)及其柱头授粉功能缺失突变体FS-M1为材料,使用油菜基因表达谱芯片筛选甘蓝型油菜柱头特异表达基因。在含有16 540个基因的油菜基因表达谱芯片中(43 803探针),获得了4 410条差异表达探针,选择部分差异表达基因进行实时定量PCR,所得结果与芯片检测结果相吻合。其中,野生型较FS-M1显著上调且获得209个功能注释的探针,对应198个基因,这些特异表达的基因主要富集在水解酶、转移酶、氧化还原酶和转录因子中;涉及较大的基因家族包括:细胞色素P450基因、GDSL脂肪酶/水解酶基因、ABC转运蛋白基因、myb转录因子基因、bHLH转录因子基因、过氧化物酶家族和受体激酶基因等。推测这些基因与甘蓝型油菜柱头发育及授粉功能有关。     

油菜AP2/ERF-B4类转录因子克隆及表达载体的构建

利用油菜UniGene数据库,以拟南芥转录因子保守序列为探针,通过电子克隆方法分离得到一个UniGene库Bna.17538,进一步序列拼接得到一个油菜AP2/ERF-B4亚族的转录因子BnaERFB4-1,长度为672 bp,并进行了相关的生物信息学分析.结果显示BnaERFB4-1是亲水性蛋白,蛋白质三级结构与拟南芥RAP2.6L非常相似,蛋白质无序化程度大于拟南芥RAP2.6L.设计引物通过PCR和RT-PCR方法分别从甘蓝型油菜沪油15幼苗的DNA和cDNA中分离了BnaERFB4-1基因,命名为BnaERFB4-1-Hy15.序列测定和分析显示,来源于沪油15的BnaERFB4-1-Hy15基因与电子克隆的基因序列差异很小,有3个氨基酸位点不同,存在一个内含子.将BnaERFB4-1-Hy15基因通过BamHⅠ和SacⅠ酶切后分别插入酵母表达载体YK3302和植物双元表达载体pYF1404的相应位置,构建了BnaERFB4-1-Hy15基因的酵母体内结合和植物转化载体,为深入研究该基因在油菜抗逆调控中的作用奠定了基础.     

龙眼体胚发生相关未知蛋白DlUP-3基因的克隆与表达分析

在龙眼体胚发生早期的蛋白质组学研究中,发现1个体胚发生相关未知蛋白DlUP-3,通过简并引物结合RACE技术进行其基因全长序列克隆。结果显示:(1)克隆到的龙眼体胚发生相关未知蛋白基因DlUP-3的全长cDNA序列为1 681bp,开放阅读框由1 017个核苷酸组成,编码338个氨基酸(GenBank登录号为GQ167202)。(2)生物信息学分析发现,该基因推导蛋白分子量为36 854.2Da,pI为9.05;该蛋白为Ras蛋白质家族成员,具有ATP/GTP-binding site motif A(P-loop)结合位点和1个典型的Ras_like_GTPase superfamily组件,无典型信号肽结构,但有跨膜螺旋的亲水性蛋白;不规则卷曲是其最大量的结构元件,散布于整个蛋白质中。(3)实时荧光定量PCR分析显示,该基因在龙眼体胚发生过程中均有表达,其中以胚性愈伤组织阶段表达量最低,而球形胚阶段最高。研究表明,DlUP-3基因在龙眼体胚发生过程尤其是球形胚阶段有重要的作用,为进一步研究该基因在龙眼体胚发生过程中的功能奠定了基础。     

甘蓝型油菜小孢子胚状体发生的细胞学观察

应用甘蓝型油菜ＤＨ系保６０４为材料研究小孢子胚发生过程,结果表明,在小孢子离体培养１～５ｄ内,随培养天数增加,小孢子的存活率迅速下降,部分小孢子培养后出现细胞膨大和分裂,并沿２－细胞。“ｆ”形３细胞,多细胞原体,胚柄球形胚,心形胚最终发育成鱼雷形胚,一般在心形胚阶段,胚柄脱离胚主体部分游离到培养基中,大多数膨大的细胞不能分裂或分裂后停止发育或发育异常。     

甘蓝型油菜小孢子胚状体发生的细胞学观察

应用甘蓝型油菜ＤＨ系保６０４为材料研究小孢子胚发生过程,结果表明,在小孢子离体培养１～５ｄ内,随培养天数增加,小孢子的存活率迅速下降,部分小孢子培养后出现细胞膨大和分裂,并沿２－细胞。“ｆ”形３细胞,多细胞原体,胚柄球形胚,心形胚最终发育成鱼雷形胚,一般在心形胚阶段,胚柄脱离胚主体部分游离到培养基中,大多数膨大的细胞不能分裂或分裂后停止发育或发育异常。     

甘蓝型油菜种子中油体的超微结构及蛋白质组分析

以甘蓝型油菜（Brassica napus L.）含油量较高的品种‘ZS11’、含油量中等的品种‘Westar’和‘Topas’以及含油量较低的品种‘ZS10’为实验材料,通过超微结构观察和统计,比较分析不同品种种子中油体形态、大小和数量的差异。研究结果显示,品种‘ZS11’种子子叶细胞油体排列致密,形态较小,大部分油体的直径低于1 μm;而在含油量中等或较低的品种中,种子子叶细胞油体排列均显疏松,其中‘Westar’和‘Topas’的油体较大,而‘ZS10’的油体大小不一。本研究还通过双向电泳分析进一步检测了‘Westar’和‘ZS11’种子中总蛋白和油体蛋白的差异表达情况。结果显示,‘Westar’和‘ZS11’种子总蛋白双向电泳图谱中,表达量具有2倍以上差异的蛋白质点共有57个;其中在‘Westar’中特异表达的种子总蛋白质点有24个,在‘ZS11’中有23个。在上述2个品种油体蛋白双向电泳图谱中,表达量具有2倍以上差异的蛋白质点共有52个,在品种‘Westar’中特异表达的有2个,‘ZS11’中有13个。表明不同含油量的油菜品种种子在油体的结构和蛋白组份上均存在差异。     

Enhanced seed oil production in canola by conditional expression of Brassica napus LEAFY COTYLEDON1 and LEC1-LIKE in developing seeds

The seed oil content in oilseed crops is a major selection trait to breeders. In Arabidopsis (Arabidopsis thaliana), LEAFY COTYLEDON1 (LEC1) and LEC1-LIKE (L1L) are key regulators of fatty acid biosynthesis. Overexpression of AtLEC1 and its orthologs in canola (Brassica napus), BnLEC1 and BnL1L, causes an increased fatty acid level in transgenic Arabidopsis plants, which, however, also show severe developmental abnormalities. Here, we use truncated napin A promoters, which retain the seed-specific expression pattern but with a reduced expression level, to drive the expression of BnLEC1 and BnL1L in transgenic canola. Conditional expression of BnLEC1 and BnL1L increases the seed oil content by 2% to 20% and has no detrimental effects on major agronomic traits. In the transgenic canola, expression of a subset of genes involved in fatty acid biosynthesis and glycolysis is up-regulated in developing seeds. Moreover, the BnLEC1 transgene enhances the expression of several genes involved in Suc synthesis and transport in developing seeds and the silique wall. Consistently, the accumulation of Suc and Fru is increased in developing seeds of the transgenic rapeseed, suggesting the increased carbon flux to fatty acid biosynthesis. These results demonstrate that BnLEC1 and BnL1L are reliable targets for genetic improvement of rapeseed in seed oil production.     

Protein and lipid composition analysis of oil bodies from two Brassica napus cultivars

Oil bodies were purified from mature seed of two Brassica napus crop cultivars, Reston and Westar. Purified oil body proteins were subjected to both 2-DE followed by LC-MS/MS and multidimensional protein identification technology. Besides previously known oil body proteins oleosin, putative embryo specific protein ATS1, (similar to caleosin), and 11-beta-hydroxysteroid dehydrogenase-like protein (steroleosin), several new proteins were identified in this study. One of the identified proteins, a short chain dehydrogenase/reductase, is similar to a triacylglycerol-associated factor from narrow-leafed lupin while the other, a protein annotated as a myrosinase associated protein, shows high similarity to the lipase/hydrolase family of enzymes with GDSL-motifs. These similarities suggest these two proteins could be involved in oil body degradation. Detailed analysis of the two other oil body components, polar lipids (lipid monolayer) and neutral lipids (triacylglycerol matrix) was also performed. Major differences were observed in the fatty acid composition of polar lipid fractions between the two B. napus cultivars. Neutral lipid composition confirmed erucic acid and oleic acid accumulation in Reston and Westar seed oil, respectively.     

Oil Body Biogenesis during Brassica napus Embryogenesis

Although the oil body is known to be an important membrane enclosed compartment for oil storage in seeds, we have little understanding about its biogenesis during embryogenesis. In the present study we investigated the oil body emergence and variations in Brassica napus cv. Topas. The results demonstrate that the oil bodies could be detected already at the heart stage, at the same time as the embryos began to turn green, and the starch grains accumulated in the chloroplast stroma. In comparison, we have studied the development of oil bodies between Arabidopsis thaliana wild type (Col) and the low-seed-oil mutant wrinkled1–3 . We observed that the oil body development in the embryos of Col is similar to that of B. napus cv. Topas, and that the size of the oil bodies was obviously smaller in the embryos of wrinkled1–3 . Our results suggest that the oil body biogenesis might be coupled with the embryo chloroplast.     

Fusion of oil bodies in endosperm of oat grains

Few microscopical studies have been made on lipid storage in oat grains, with variable results as to the extent of lipid accumulation in the starchy endosperm. Grains of medium- and high-lipid oat (Avena sativa L.) were studied at two developmental stages and at maturity, by light microscopy using different staining methods, and by scanning and transmission electron microscopy. Discrete oil bodies occurred in the aleurone layer, scutellum and embryo. In contrast, oil bodies in the starchy endosperm often had diffuse boundaries and fused with each other and with protein vacuoles during grain development, forming a continuous oil matrix between the protein and starch components. The different microscopical methods were confirmative to each other regarding the coalescence of oil bodies, a phenomenon probably correlated with the reduced amount of oil-body associated proteins in the endosperm. This was supported experimentally by SDS-PAGE separation of oil-body proteins and immunoblotting and immunolocalization with antibodies against a 16 kD oil-body protein. Much more oil-body proteins per amount of oil occurred in the embryo and scutellum than in the endosperm. Immunolocalization of 14 and 16 kD oil-body associated proteins on sectioned grains resulted in more heavy labeling of the embryo, scutellum and aleurone layer than the rest of the endosperm. Observations on the appearance of oil bodies at an early stage of development pertain to the prevailing hypotheses of oil-body biogenesis.     

Differential,temporal and spatial expression of genes involved in storage oil and oleosin accumulation in developing rapeseed embryos: implications for the role of oleosins and the mechanisms of oil-body formation

The temporal and spatial expression of oleosin and ₉-stearoyl-ACP desaturase genes and their products has been examined in developing embryos of rapeseed, Brassica napus L. var. Topas. Expression of oleosin and stearate desaturase genes was measured by in situ hybridisation at five different stages of development ranging from the torpedo stage to a mature-desiccating embryo. The temporal pattern of gene expression varied dramatically between the two classes of gene. Stearate desaturase gene expression was relatively high, even at the torpedo stage, whereas oleosin gene expression was barely detectable at this stage. By the stage of maximum embryo fresh weight, stearate desaturase gene expression had declined considerably while oleosin gene expression was at its height.In contrast to their differential temporal expression, the in situ labelling of both classes of embryo-specific gene showed similar, relatively uniform patterns of spatial expression throughout the embryo sections. Immunogold labelling of ultra-thin sections from radicle tissue with anti-oleosin antibodies showed similar patterns to sections from cotyledon tissue. However, whereas at least three oleosin isoforms were detectable on western blots of homogenates from cotyledons, only one isoform was found in radicles. This suggests that some of the oleosin isoforms may be expressed differentially in the various types of embryo tissue. The differential timing of stearate desaturase and oleosin gene expression was mirrored by similar differences in the timing of the accumulation of their ultimate products, i.e. storage oil and oleosin proteins. Oil-body fractions prepared from young (2.5 mg) embryos contained very little oleosin protein, as examined by SDS-PAGE and western blotting, whereas identically prepared fractions from dry seeds contained over 10% (w/w) oleosin. Dehydration of oil bodies from young embryos resulted in their breakdown and coalescence into large clumps of oil which could not be re-emulsified, even after rehydration. In contrast, the oleosin-rich oil bodies from mature embryos were stable to dehydration and subsequent rehydration. It is suggested that, in developing rapeseed embryos, the accumulation of storage oil and oleosins is not concomitant but that the eventual deposition of oleosins onto the surfaces of storage oil bodies is essential for their stability during seed desiccation.Abbreviations ABA abscisic acid - ACP acyl carrier protein - GLC gas-liquid chromatography - PBS phosphate-buffered saline