The role of prey stratification in the predation pressure by the cydippid ctenophore Mertensia ovum in the Barents Sea

The cydippid ctenophore Mertensia ovum occurs throughout the Norwegian arctic regions at least from the ice edge to the Arctic Circle. Using new data from the Barents and Greenland Seas, a simple model is constructed in which the upper boundary conditions for the trophic impact of Mertensia on populations of Calanus in this area are explored. Based on abundance data from MOCNESS and vertical net samples, experimental data on feeding and a range of typical values for the abundance of the principal copepod species, the range of probable predation pressure on copepods is calculated. Using typical abundances of the copepods and ctenophores in the Barents Sea, M. ovum appears to be capable of consuming a maximum of ca 1–5% d^–1 of the copepods in the water where it occurs. Vertical and horizontal spatial coupling probably plays a significant role in determining the extent of predation for this predator. Predation by other ctenophores may be a significant factor in its own biology.     

Biofilm formation in laminar flow usingPseudomonas fluorescens EX101

The relationship between biofilm formation and Reynolds number in laminar flow has been investigated usingPseudomonas fluorescens EX101. It was shown using a Modified Robbins Device that in laminar flow, numbers of viable cells in a developed biofilm increased with Reynolds number (Re 2, 17 and 51.5), as would be expected in a system where molecular transport to the wall is limited by diffusion. By monitoring fluorescent beads in a flowcell with a scanning confocal laser microscope at similar low Reynolds numbers, the velocity profile close to the solid surface was determined. It was shown that the presence of a thin bacterial film (up to 12 m) displaced the flow profile away from the wall by a distance equivalent to the film thickness. Total cell counts from the Modified Robbins Device samples were not significantly different at the different flow rates but were higher than viable counts. Interruption of the flow had no significant effect on colonisation by the bacteria through the Modified Robbins Device in the first few hours. However, viable numbers were reduced when the flow was stopped at 7 h after initial colonisation.     

Cilia and the life of ctenophores

Ctenophores, or comb jellies, are a distinct phylum of marine zooplankton with eight meridional rows of giant locomotory comb plates. Comb plates are the largest ciliary structures known, and provide unique experimental advantages for investigating the biology of cilia. Here, I review published and unpublished work on how ctenophores exploit both motile and sensory functions of cilia for much of their behavior. The long‐standing problem of ciliary coordination has been elucidated by experiments on a variety of ctenophores. The statocyst of ctenophores is an example of how mechanosensory properties of motile cilia orient animals to the direction of gravity. Excitation or inhibition of comb row beating provides adaptive locomotory responses, and global reversal of beat direction causes escape swimming. The diverse types of prey and feeding mechanisms of ctenophores are related to radiation in body form and morphology. The cydippid Pleurobrachia catches copepods on tentacles and undergoes unilateral ciliary reversal to sweep prey into its mouth. Mnemiopsis uses broad muscular lobes and ciliated auricles to capture and ingest prey. Beroë has giant smooth muscles and toothed macrocilia to rapidly engulf or bite through ctenophore prey, and uses reversible tissue adhesion to keep its mouth closed while swimming. Ciliary motor responses are calcium‐dependent, triggered by voltage‐activated calcium channels located along the length (reversed beating) or at the base (activation of beating) of ciliary membranes. Ciliary and muscular responses to stimuli are regulated by epithelial and mesogleal nerve nets with ultrastructurally identifiable synapses onto effector cells. Post‐embryonic patterns of comb row development in larval and adult stages are described and compared with regeneration of comb plates after surgical removal. Truly, cilia and ctenophores, like love and marriage, go together like a horse and carriage.     

Biotechnology at low Reynolds numbers.

The shrinking of liquid handling systems to the micron and submicron size range entails moving into the area of small Reynolds numbers. The fluid dynamics in this regime are very different from the macroscale. We present an intuitive explanation of how the different physics of small Reynolds numbers flow, along with microscopic sizes, can influence device design, and give examples from our own work using fluid flow in microfabricated devices designed for biological processing.     

Near-coronal fluid flow patterns and food cell manipulation in the rotifer Brachionus calyciflorus

Brachionus calyciflorus is able to differentially capture or deflect potential food cells depending on the overall density (numbers µl^–1) and size of suspended particles the rotifer encounters while feeding. This has been shown to correlate with behavioral regulation of pseudotrochal structures, and primarily by large medial tufts of compound cilia (cirri). When pseudotrochal cirri are extended laterally, inferred fluid flow pathlines show that only cells in the central 25 µm of the coronal disk are subject to ingestion. When pseudotrochal cirri form medially-oriented screens, fluid flow is directed away from the pseudotrochas and central corona, an effect apparent up to 70 µm in front of a restrained animal. Fluid flow in all areas of the B. calyciflorus corona is at very low Reynolds Number (Re), with calculated values always less than 10^–1. Accordingly, removal of cells from feeding currents probably is not due to sieving but is more likely due to direct interception of particles by individual ciliary elements. Certain large cells — such as Euglena gracilis — are retained in the inner pseudotrochal space for up to 500 msec, ample time for B. calyciflorus to assess the physical and chemical characteristics of this or other potential foods.     

Primary inhibition: a mechanism for sudden stoppage of metachrony in ctenophores

The ctenophores Beroë cucumis and Pleurobrachia pileus exhibit rapid stoppage of comb plate beating, without accompanying muscular contraction, in response to an orally applied mechanical stimulus. This phenomenon, termed ‘primary inhibition’ by Göthlin, was re-examined by high-speed video microscopy and intracellular recording. The most remarkable features of this event were that (1) inhibition was associated with only one or two comb plates in the row, (2) inhibition occurred nearly anywhere in the ciliary beat cycle, (3) the inhibited plate acted as a mechanical blockade to the propagation of additional metachronal waves, and (4) a single depolarizing post-synaptic potential occurred nearly simultaneously with comb plate inhibition. B. cucumis and P. pileus have evolved a neurally controlled behavior to rapidly stop comb plate metachrony.

     

Pollen flow of cultivated rice measured under experimental conditions

The pollen flow pattern of a cultivated rice variety, Minghui-63, was studied at horizontal and vertical levels under experimental conditions. Data obtained from pollen traps for six designed populations (as pollen sources) at different intervals showed that the dispersal of rice pollen decreased with the increase of distance from pollen sources and that the rice pollen flow was significantly influenced by weather conditions, particularly by wind direction and speed. For a mean wind speed of 2.52 m/s in a downwind direction, the observed distance of rice pollen dispersal was 38.4 m, indicating that rice pollen grains normally disperse at a relatively small range. However, the maximum distance of rice pollen flow could be up to 110 m, using regression analysis of pollen flow and wind speed, when the wind speed reached 10 m/s in this study. The frequency of pollen flow was positively correlated with pollen source size within a given range, suggesting that pollen flow will occur effectively at a considerable rate in rice fields with sufficiently large pollen sources. In addition, many more pollen grains were detected at the height of 1.0–1.5 m than at 2.0 m, indicating that rice pollen mainly disperses at relatively low heights. Results from this study are useful both for minimizing transgene escape from transgenic rice and in situ conservation of wild relatives of rice, as well as for hybrid seed production, where an effective isolation buffer zone needs to be established.     

Interfacial feeding behavior and particle flow patterns ofAnopheles quadrimaculatus larvae (Diptera: Culicidae)

The interfacial feeding behavior, mouthpart movements, and particle flow patterns of Anopheles quadrimaculatuslarvae were investigated, using videotape recordings, high-speed microcinematography, SEM, and laboratory experiments. While positioned at the water surface, larvae demonstrated 12 behaviors associated with movements of the head. In one of these, a larva rotated its head 180° and directed its mouthparts against the air-water interface. The larva rapidly extended and retracted its lateral palatal brushes (LPBs) at a rate of 5 cycles/s (5 Hz), creating currents and allowing for the collection of particles. Particles moved toward the head at a velocity of 4.31 mm/s, in discrete stops and starts, as the LPBs beat. Our analyses determined that particle movement toward the mouth was governed by very low Reynolds numbers (0.002–0.009). This finding indicated that viscous forces predominated in Anophelesfeeding and no inertial movement of particles occurred. According to this model, the LPBs cannot intercept particles directly, but function as paddles for particle entrainment. We did not observe the pharynx to function in particle filtration but, rather, in food bolus formation. We propose that the maxillary pilose area and midpalatal brush function as interception structures. It appeared that the LPBs do not break the surface film to feed, but collect particles from the surface microlayers. A plume of uningested particles emerged from the sides of the cibarium and descended into the water column. The plume consisted of alternately clear and dark, lenticular laminae formed beneath the larval head during the collecting filtering feeding mode. A comparison of particle sizes from surface microlayers and gut contents of fourth instars showed that larvae ingested mainly small particles in the range of 1.5 to 4.5 pm in diameter. The potential significance of interfacial feeding by anopheline larvae in their aquatic environment is discussed.     

Low Reynolds number turbulence modeling of blood flow in arterial stenoses.

Moderate and severe arterial stenoses can produce highly disturbed flow regions with transitional and or turbulent flow characteristics. Neither laminar flow modeling nor standard two-equation models such as the kappa-epsilon turbulence ones are suitable for this kind of blood flow. In order to analyze the transitional or turbulent flow distal to an arterial stenosis, authors of this study have used the Wilcox low-Re turbulence model. Flow simulations were carried out on stenoses with 50, 75 and 86% reductions in cross-sectional area over a range of physiologically relevant Reynolds numbers. The results obtained with this low-Re turbulence model were compared with experimental measurements and with the results obtained by the standard kappa-epsilon model in terms of velocity profile, vortex length, wall shear stress, wall static pressure, and turbulence intensity. The comparisons show that results predicted by the low-Re model are in good agreement with the experimental measurements. This model accurately predicts the critical Reynolds number at which blood flow becomes transitional or turbulent distal an arterial stenosis. Most interestingly, over the Re range of laminar flow, the vortex length calculated with the low-Re model also closely matches the vortex length predicted by laminar flow modeling. In conclusion, the study strongly suggests that the proposed model is suitable for blood flow studies in certain areas of the arterial tree where both laminar and transitional/turbulent flows coexist.     

Evaluation of Adult White Sturgeon Swimming Capabilities and Applications to Fishway Design

Concern over passage of sturgeon barriers, has focused attention on fishway design that accommodates its swimming performance. In order to evaluate swimming performance, regarding fish ladder type partial barriers, wild adult sturgeons, Acipenser transmontanus; 121–76m fork length, were captured in the San Francisco Bay Estuary and Yolo Bypass toe drain. Hydrodynamic forces and kinematic parameters for swimming performance data were collected in a laboratory flume under three flow conditions through barriers and ramp. The experiments were conducted in a 24.4 m long, 2.1 m wide, and 1.62 m deep aluminum channel. Two geometric configurations of the laboratory model were designed based on channel characteristics that have been identified in natural river systems. At a given swimming speed and fish size, the highest guidance efficiencies of successful white sturgeon passage as a function of flow depth, flow velocity, turbulence intensity, Reynolds number, Froude number and shear velocity observed in the steady flow condition, tested with the horizontal ramp structure, occurred at an approach velocity of 0.33 ms^-1. The guidance efficiency of successful sturgeon passage increased both with increasing flow velocity and Froude number, and decreased both with the flow depth and the turbulence intensity. This study also provides evidence that tail beat frequency increases significantly with swimming speed, but tail beat frequency decreases with fish total length. Stride length increases both with swimming speed and fish total length. The importance of unsteady forces is expressed by the reduced frequency both with swimming speed and fish total length. Regression analysis indicates that swimming kinematic variables are explained by the swimming speed, the reduced frequency and the fish total length. The results emphasize the importance of fish ladder type patchiness when a fishway is designed for the passage of sturgeon.     

Effect of flow regimes on the presence of Legionella within the biofilm of a model plumbing system

AIMS: Stagnation is widely believed to predispose water systems to colonization by Legionella. A model plumbing system was constructed to determine the effect of flow regimes on the presence of Legionella within microbial biofilms. METHODS AND RESULTS: The plumbing model contained three parallel pipes where turbulent, laminar and stagnant flow regimes were established. Four sets of experiments were carried out with Reynolds number from 10,000 to 40,000 and from 355 to 2,000 in turbulent and laminar pipes, respectively. Legionella counts recovered from biofilm and planktonic water samples of the three sampling pipes were compared with to determine the effect of flow regime on the presence of Legionella. Significantly higher colony counts of Legionella were recovered from the biofilm of the pipe with turbulent flow compared with the pipe with laminar flow. The lowest counts were in the pipe with stagnant flow. CONCLUSIONS: We were unable to demonstrate that stagnant conditions promoted Legionella colonization. SIGNIFICANCE AND IMPACT OF THE STUDY: Plumbing modifications to remove areas of stagnation including deadlegs are widely recommended, but these modifications are tedious and expensive to perform. Controlled studies in large buildings are needed to validate this unproved hypothesis.     

Synchrony of Seed Dispersal, Hydrology and Local Climate in a Semi-arid River Reach in California

The temporal availability of propagules is a critical factor in sustaining pioneer riparian tree populations along snowmelt-driven rivers because seedling establishment is strongly linked to seasonal hydrology. River regulation in semi-arid regions threatens to decouple seed development and dispersal from the discharge regime to which they evolved. Using the lower Tuolumne River as a model system, we quantified and modeled propagule availability for Populus fremontii (POFR), Salix gooddingii (SAGO), and Salix exigua (SAEX), the tree and shrub species that dominate near-channel riparian stands in the San Joaquin Basin, CA. A degree-day model was fit to field data of seasonal seed density and local temperature from three sites in 2002–2004 to predict the onset of the peak dispersal period. To evaluate historical synchrony of seed dispersal and seasonal river hydrology, we compared peak spring runoff timing to modeled peak seed release periods for the last 75 years. The peak seed release period began on May 15 for POFR (range April 23–June 10), May 30 for SAGO (range May 19–June 11) and May 31 for SAEX (range May 8–June 30). Degree-day models for the onset of seed release reduced prediction error by 40–67% over day-of-year means; the models predicted best the interannual, versus site-to-site, variation in timing. The historical analysis suggests that POFR seed release coincided with peak runoff in almost all years, whereas SAGO and SAEX dispersal occurred during the spring flood recession. The degree-day modeling approach reduce uncertainty in dispersal timing and shows potential for guiding flow releases on regulated rivers to increase riparian tree recruitment at the lowest water cost.     

Effects of helium-oxygen mixtures on endotracheal tubes: an in vitro study

QUESTION: To determine flow pattern and critical Reynolds numbers in endotracheal tubes submitted to different helium-oxygen mixtures under laboratory conditions. MATERIALS AND METHODS: Flow-pressure relationships were performed for seven endotracheal tubes (rectilinear position, entry length applied) with distal end open to atmosphere (predicted internal diameters: 6-9 mm). Nine helium-oxygen mixtures were tested, with FIHe varying from zero to 0.78 (increment: 10%). Nine flows were tested, with rates varying from 0.25 to 1.60 l s(-1) (increment: 0.15 l s(-1)). Gas flow resistance was calculated, and for each endotracheal tube, a Moody diagram was realised. Flow regime and critical Reynolds numbers were then determined (fully established laminar, nonestablished laminar, smooth turbulent, or rough). RESULTS: Even low concentration of helium in inspiratory mixture reduces endotracheal tubes resistance. Effect is maximal for high flows, small tube and high FIHe. Critical Reynolds numbers are inversely correlated to tube diameter. ANSWER: Under laboratory conditions, flow pattern in endotracheal tubes varies from fully established laminar to rough. Knowledge of the critical Reynolds numbers allows correct application of fluid mechanic formula when studying tube or gaseous mixture effects on respiratory mechanisms.     

Morphological and Physiological Acclimation Responses to Contrasting Light and Water Regimes in <Emphasis Type="Italic">Primula sieboldii</Emphasis>

The effects of the availability of light (high, medium and low) and soil water (wet and dry) on morphological and physiological traits responsible for whole plant carbon gain and ramet biomass accumulation were examined in a splitter-type clonal herbaceous species Primula sieboldii, a spring plant inhabiting broad range of light environments including open grassland and oak forest understory. Growth experiments were conducted for three genets originated from natural microhabitats differing in light and soil water availability. Ramets of a genet from high light and wet microhabitat, which were grown in low light (relative photon flux density: R-PPFD of 5%) showed 41% less light-saturated photosynthetic rate, 50% less dark respiration rate and earlier defoliation than the ramets in high light (R-PPFD of 61%). The estimation of daily photosynthesis revealed that the light acclimation response in leaf gas exchange contributes to efficient carbon gain of whole plants, irrespective of experimental light conditions. Water stress increased root weight ratio, decreased ramet leaf area, petiole length and photosynthetic capacity. These morphological effects of water stress were larger in high and medium light regimes than in low light regime. The consequence of the above responses was recognized in the relative growth rate of the ramets. The relative growth rate of the ramets in high light with wet regime was four-fold of that in low light plus wet regime, and was 1.5-fold of that in high light plus dry regime. However, even in low light and/or dry regimes, ramets kept positive relative growth rates and produced gemma successfully. We could not detect significant variation in growth responses among genets. The high photosynthetic plasticity revealed in the present study should enable Primula sieboldii to inhabit in a broad range of light and soil water availability.     

Flow Visualization and Performance Measurements of a Flagellar Propeller

A new type of propeller that is optimized for low Reynolds numbers is required to propel a small object in a medium where the flow is dominated by viscous rather than inertial forces.A propeller in the shape of a bacterial flagellum seems an appropriate choice for driving a small object.Accordingly,in this study,we visualized the velocity field induced by a spring-like propeller inspired by the Escherichia coli flagellum,using a macroscopic model and applying stereoscopic particle image velocimetry.We also experimentally evaluated the effect of pitch and rotational speed on the performance of this flagellar propeller.Silicone oil,which has a kinematic viscosity 100,000 times that of water,was used as the working fluid to generate a low Reynolds number for the macroscopic model.Thrust,torque,and velocity were measured as functions of pitch and rotational speed,and the efficiency of the propeller was calculated from the measured results.We found that the flagellar propeller reached a maximum efficiency when the pitch angle was approximately 53°.Compared to pitch,rotational speed had a relatively small effect on the efficiency,and the pitch altered the flow pattern behind the rotating propeller.     

The presence of rabbits adjacent to roads increases polecat road mortality

Road mortality is an increasing problem for terrestrial vertebrate conservation due to the increase of both road numbers and vehicle flow. We hypothesize that the probability of a predator being killed on the road is related to the presence of its prey adjacent to the road, which is likely to be related to the use that these predators make of road verges. We aim to identify the features of specific stretches of road where road-kills of a predator (European polecat) occur in Mediterranean landscapes, including the presence of its main prey (European rabbit) and landscape and road features. We compared 85 100 m long stretches of road where at least one road-kill was recorded with 104 stretches without any road-kill in a dry agricultural landscape in central Spain. We used regression analysis to investigate the relationship between road-kill occurrence and the features in the 67% of the cases. Road-kill stretches were characterised by greater numbers of rabbit burrows in the road verges and by higher traffic flow and speed (i.e. higher speed limit, lower proportion of heavy vehicles, wider road and lower proportion of unbroken central lines). Road-kill stretches also had more metres built over bridges and lower densities of people. We validated our best model with a dataset (the 33% of the cases) not included in its development, which correctly classified 82% of road-kill stretches and 89% of non-road kill stretches. Our results highlight the need for taking into account food resource distribution when studying causes of animal road-kills.     

Life cycles and distribution of the aquatic gastropod molluscs Bithynia tentaculata (L.), Gyraulus albus (Muller), Planorbis planorbis (L.) and Lymnaea peregra (Muller) in relation to water chemistry

The ecology of the aquatic gastropods Bithynia tentaculata, Gyraulus albus, Planorbis planorbis and Lymnaea peregra in North West England was investigated over 13 months at sites chosen for their wide range of water chemistry. Multiple regression analysis was used to determine the significance to the mollusc distributions of a variety of physico-chemical factors. Biotic factors were not considered. The species had similar life cycles, with little difference between populations within a species. B. tentaculata could live for over a year, and the major water chemistry variable was potassium (+), where the sign is that of the regression coefficient. G. albus could also survive into a second year and the major variable was mud substratum type (+). Rock substratum type (-) was the most important factor for P. planorbis. There was a slight difference in the life cycles of L. peregra in hard and medium compared with soft waters and the major water chemistry variable was magnesium (-).     

Novel bridge of axon-like processes of epithelial cells in the aboral sense organ of ctenophores

We describe by light and electron microscopy a novel structure in the aboral sense organ (apical organ) of cydippid (Pleurobrachia) and lobate (Mnemiopsis) ctenophores. An elevated bundle of long, thin, microtubule-filled processes arises from the apical ends of two groups of epithelial cells located on opposite sides of the apical organ along the tentacular plane of the body. This bundle of axon-like processes arches over the epithelial floor like a bridge, with branches at both ends running toward opposing pairs of ciliary balancers that are motile pacemakers for the rows of locomotory ciliary comb plates. The bridge in Pleurobrachia is approximately 40 microm long and 3-4 microm wide and consists of approximately 60 closely packed processes, 0.2-0.8 microm thick, containing vesicles and numerous microtubules running parallel to their long axes. There are approximately 30 epithelial cells in each of the two groups giving rise to the bridge and each cell forms a single process, so roughly half of the processes in the bridge must originate from cells on one side and diverge into branches to a pair of balancers on the opposite side of the apical organ. The 150-200 cilia in each balancer arise from morphologically complex cellular projections with asymmetric lateral extensions directed towards a fork of the bridge. Presynaptic triad structures and vesicles are found in this region but clear examples of synaptic contacts between bridge processes and balancer cells have not yet been traced. Cydippid larvae of Mnemiopsis have a conspicuous bridge along the tentacular plane of the apical organ. Beroid ctenophores that lack tentacles at all stages do not have a bridge. We discuss the possibility that the bridge is an electrical conduction pathway to balancers that coordinates tentacle-evoked swimming responses of ctenophores, such as global ciliary excitation.     

Environmental Flow Regimes for <Emphasis Type="Italic">Dysidea avara</Emphasis> Sponges

The aim of our research is to design tank systems to culture Dysidea avara for the production of avarol. Flow information was needed to design culture tanks suitable for effective production. Water flow regimes were characterized over a 1-year period for a shallow rocky sublittoral environment in the Northwestern Mediterranean where D. avara sponges are particularly abundant. Three-dimensional Doppler current velocities at 8-10-m depths ranged from 5 to 15 cm/s over most seasons, occasionally spiking to 30-66 cm/s. A thermistor flow sensor was used to map flow fields in close proximity ( approximately 2 cm) to individual sponges at 4.5-, 8.8-, and 14.3-m depths. These "proximal flows" averaged 1.6 cm/s in calm seas and 5.9 cm/s during a storm, when the highest proximal flow (32.9 cm/s) was recorded next to a sponge at the shallowest station. Proximal flows diminished exponentially with depth, averaging 2.6 cm/s +/- 0.15 SE over the entire study. Flow visualization studies showed that oscillatory flow (0.20-0.33 Hz) was the most common regime around individual sponges. Sponges at the 4.5-m site maintained a compact morphology with large oscula year-around despite only seasonally high flows. Sponges at 8.8 m were more erect with large oscula on tall protuberances. At the lowest-flow 14.3-m site, sponges were more branched and heavily conulated, with small oscula. The relationship between sponge morphology and ambient flow regime is discussed.