Agrobacterium-mediated transient expression in citrus leaves: a rapid tool for gene expression and functional gene assay

In this study, we present a method for transient expression of the type III effector AvrGf1 from Xanthomonas citri subsp. citri strain A^w in grapefruit leaves (Citrus paradisi) via Agrobacterium tumefaciens. The coding sequence of avrGf1 was placed under the control of the constitutive CaMV 35S promoter in the binary vectors pGWB2 and pGWB5. Infiltration of grapefruit leaves with A. tumefaciens carrying these constructs triggered a hypersensitive response (HR) in grapefruit 4 days after inoculation. When transiently expressed in grapefruit leaves, two mutants, AvrGf1ΔN116 and AvrGf1ΔC83, failed to induce an HR. Moreover, using bioinformatics tools, a chloroplast transit signal was predicted at the N terminus of AvrGf1. We demonstrated chloroplast localization by using an AvrGf1::GFP fusion protein, where confocal images revealed that GFP fluorescence was accumulating in the stomatal cells that are abundant in chloroplasts. Transient expression in citrus has the potential for aiding in the development of new disease defense strategies in citrus.     

Towards the integrated control of Korean citrus pests

Research on Korean citrus pests has received little attention in the past. This paper describes studies suggesting that an integrated control system is feasible. Population fluctuations of citrus insects were studied intensively in 1973 and 1974. In unsprayed trees a population outbreak ofPanonychus citri (Mc Gregor) in 1973 declined sharply following the activity ofOligota yasumatsui Kistner (Staphylinidae) and other predators, to remain at low densities for the rest of the season. In 1974 a smaller outbreak was apparently again checked by predators. With negligible rates of parasitism there was a gradual rise in the numbers ofCeroplastes rubens Maskell which is probably a key pest. In a farmer's grove receiving 7–8 annual sprays,P. citri populations were higher at the end of each season than in unsprayed trees.Phyllocnistis citrella Stainton severely attacked the summer flush in sprayed and unsprayed groves equally, no parasitism being observed. Other citrus pests observed were unimportant and many were frequently parasitized. In an experiment in 1973, trunk applications of monocrotophos did not controlP. citri orP. citrella. Flushing rhythm consists of a heavy spring flush followed by a 2nd lighter flush in summer.     

Global analysis of the eukaryotic pathways and networks regulated by Salmonella typhimurium in mouse intestinal infection in vivo

Background

Citrus canker is a disease that has severe economic impact on the citrus industry worldwide. There are three types of canker, called A, B, and C. The three types have different phenotypes and affect different citrus species. The causative agent for type A is Xanthomonas citri subsp. citri, whose genome sequence was made available in 2002. Xanthomonas fuscans subsp. aurantifolii strain B causes canker B and Xanthomonas fuscans subsp. aurantifolii strain C causes canker C.

Results

We have sequenced the genomes of strains B and C to draft status. We have compared their genomic content to X. citri subsp. citri and to other Xanthomonas genomes, with special emphasis on type III secreted effector repertoires. In addition to pthA, already known to be present in all three citrus canker strains, two additional effector genes, xopE3 and xopAI, are also present in all three strains and are both located on the same putative genomic island. These two effector genes, along with one other effector-like gene in the same region, are thus good candidates for being pathogenicity factors on citrus. Numerous gene content differences also exist between the three cankers strains, which can be correlated with their different virulence and host range. Particular attention was placed on the analysis of genes involved in biofilm formation and quorum sensing, type IV secretion, flagellum synthesis and motility, lipopolysacharide synthesis, and on the gene xacPNP, which codes for a natriuretic protein.

Conclusion

We have uncovered numerous commonalities and differences in gene content between the genomes of the pathogenic agents causing citrus canker A, B, and C and other Xanthomonas genomes. Molecular genetics can now be employed to determine the role of these genes in plant-microbe interactions. The gained knowledge will be instrumental for improving citrus canker control.     

Detection of <Emphasis Type="Italic">Diaphorina citri</Emphasis> Kuwayama (Hemiptera: Liviidae) in Kenya and potential implication for the spread of Huanglongbing disease in East Africa

The Asian citrus psyllid Diaphorina citri Kuwayama (Hemiptera: Liviidae) is a damaging pest of citrus globally and has recently been detected in Tanzania. Although direct damage by the pest is seldom of economic importance, the insect is more notorious for its ability to vector the fastidious phloem-limited bacterium Candidatus Liberibacter asiaticus (CLas), the putative causal bacterium of Huanglongbing or Asian citrus greening disease. For many years, Trioza erytreae (Del Guercio) (Hemiptera: Triozidae) was known to be the main vector of the African citrus greening disease caused by Candidatus Liberibacter africanus (CLaf), but the recent arrival of D. citri on the continent adds to the dynamics of infection and spread of both diseases on mainland Africa. Following the recent report of the presence of D. citri in Tanzania, an additional delimiting survey was carried out in the region, focusing on Kenya, mainland Tanzania and Zanzibar to detect the presence and ascertain the extent of spread of D. citri. We employed molecular tools based on the use of DNA barcoding to confirm the identity of D. citri. In addition to D. citri, the occurrence of T. erytreae in the same sampling locations is also reported. Adults and nymphs of either D. citri or T. erytreae were collected from citrus at many of the surveyed sites ranging from 19 to 668 m above sea level (masl) in Tanzania, 20–1666 masl in Kenya, and 42–48 masl in Zanzibar. Diaphorina citri was sympatric with T. erytreae at the mid to higher elevations of 1375–1666 masl and no T. erytreae or its open-gall symptoms were detected below 523 masl. Sequences obtained were queried via BLAST and all linked to D. citri of different accession numbers already available on GenBank. This is the first report of the presence of D. citri in Kenya and Zanzibar. The potential implication of the detection and spread of the two pathogens, CLaf and CLas to the citrus industry in East Africa and movement of suitable host plants is discussed.     

Efficient auto-excision of a selectable marker gene from transgenic citrus by combining the Cre/loxP system and ipt selection

Key message

A highly efficient Cre-mediated deletion system, offering a good alternative for producing marker-free transgenic plants that will relieve public concerns regarding GMOs, was first developed in citrus.

Abstract

The presence of marker genes in genetically modified crops raises public concerns regarding their safety. The removal of marker genes can prevent the risk of their flow into the environment and hasten the public’s acceptance of transgenic products. In this study, a new construct based on the Cre/loxP site-recombination system was designed to delete marker genes from transgenic citrus. In the construct, the selectable marker gene isopentenyltransferase gene (ipt) from Agrobacterium tumefaciens and the Cre recombinase gene were flanked by two loxP recognition sites in the direct orientation. The green fluorescent protein (gfp) reporter gene for monitoring the transformation of foreign genes was located outside of the loxP sequences. Transformation and deletion efficiencies of the vector were investigated using nopaline synthase gene (NosP) and CaMV 35S promoters to drive expression of Cre. Analysis of GFP activity showed that 28.1 and 13.6 % transformation efficiencies could be obtained by NosP- and CaMV 35S-driven deletions, respectively. Molecular analysis demonstrated that 100 % deletion efficiency was observed in the transgenic plants. The complete excision of the marker gene was found in all deletion events driven by NosP and in 81.8 % of deletion events driven by CaMV 35S. The results showed that Cre/loxP-mediated excision was highly efficient and precise in citrus. This approach provides a reliable strategy for auto-deletion of selectable marker genes from transgenic citrus to produce marker-free transgenic plants.     

NMR-based metabolomics of transgenic and non-transgenic sweet orange reveals different responses in primary metabolism during citrus canker development

Introduction

Citrus canker, a disease caused by Xanthomonas axonopodis pv. citri (Xac) bacteria, has been responsible for extensive economic losses in citriculture. In this work, we report the metabolic responses of citrus plants during disease development. This information can be useful for understanding the natural mechanism of plant defense beyond helping design new varieties and/or genetically modified genotypes for tolerance/resistance against citrus canker.

Objectives

To understand how primary metabolism is affected in two sweet orange genotypes during citrus canker development.

Methods

¹H NMR spectroscopy together with chemometrics was used to evaluate the metabolic changes caused by Xac infection at various time points (days 4, 12 and 20) in Citrus sinensis L. Osbeck leaves from non-transgenic and transgenic plants expressing the antibacterial peptide sarcotoxin.

Results

The results revealed a high level of metabolic similarity between the studied genotypes without Xac infection. However, after Xac infection, the plants responded differently to disease development. The non-transgenic genotype showed altered early precursors of some secondary metabolites (tryptophan, tyrosine and putrescine) in addition to signaling metabolites of biotic stress (putrescine and dimethylamine), and the drastic reduction of gluconeogenesis was the overall metabolic cost for defense. The transgenic genotype suffered late metabolic changes due to the protective stoichiometric role of sarcotoxin. In addition, the oxidative stress response was more balanced in transgenic than in non-transgenic plants.

Conclusion

An NMR-based metabolomic approach was useful for understanding plant–pathogen interactions in citrus canker. Our findings provide valuable preliminary insights into different stages of citrus canker development.

     

Screening promoters for Anthurium transformation using transient expression

Key message

There are multiple publications on Anthurium transformation, yet a commercial product has not been achieved. This may be due to use of non-optimum promoters here we address this problem.

Abstract

Different promoters and tissue types were evaluated for transient β-glucuronidase (GUS) expression in Anthurium andraeanum Hort. ‘Marian Seefurth’ following microprojectile bombardment. Plasmids containing the Ubiquitin 2, Actin 1, Cytochrome C1 from rice, Ubiquitin 1 from maize and 35S promoter from Cauliflower Mosaic Virus fused to a GUS reporter gene were bombarded into in vitro grown anthurium lamina, somatic embryos and roots. The number of GUS foci and the intensity of GUS expression were evaluated for each construct. Ubiquitin promoters from rice and maize resulted in the highest number of expressing cells in all tissues examined. Due to the slow growth of anthurium plants, development of transgenic anthurium plants takes years. This research has rapidly identified multiple promoters that express in various anthurium tissues facilitating the development of transformation vectors for the expression of desirable traits in anthurium plants.     

High throughput transcriptome analysis of coffee reveals prehaustorial resistance in response to <Emphasis Type="Italic">Hemileia vastatrix</Emphasis> infection

Transgenic expression of the pepper Bs2 gene confers resistance to Xanthomonas campestris pv. vesicatoria (Xcv) pathogenic strains which contain the avrBs2 avirulence gene in susceptible pepper and tomato varieties. The avrBs2 gene is highly conserved among members of the Xanthomonas genus, and the avrBs2 of Xcv shares 96% homology with the avrBs2 of Xanthomonas citri subsp. citri (Xcc), the causal agent of citrus canker disease. A previous study showed that the transient expression of pepper Bs2 in lemon leaves reduced canker formation and induced plant defence mechanisms. In this work, the effect of the stable expression of Bs2 gene on citrus canker resistance was evaluated in transgenic plants of Citrus sinensis cv. Pineapple. Interestingly, Agrobacterium-mediated transformation of epicotyls was unsuccessful when a constitutive promoter (2× CaMV 35S) was used in the plasmid construction, but seven transgenic lines were obtained with a genetic construction harbouring Bs2 under the control of a pathogen-inducible promoter, from glutathione S-transferase gene from potato. A reduction of disease symptoms of up to 70% was observed in transgenic lines expressing Bs2 with respect to non-transformed control plants. This reduction was directly dependent on the Xcc avrBs2 gene since no effect was observed when a mutant strain of Xcc with a disruption in avrBs2 gene was used for inoculations. Additionally, a canker symptom reduction was correlated with levels of the Bs2 expression in transgenic plants, as assessed by real-time qPCR, and accompanied by the production of reactive oxygen species. These results indicate that the pepper Bs2 resistance gene is also functional in a family other than the Solanaceae, and could be considered for canker control.     

Impacts of calcium water treatment residue on the soil-water-plant system in citrus production

Background and aims

Long-term use of copper (Cu) based fungicides has accelerated Cu contamination in soils and subsequently its export to the environment. Field trials were conducted in representative commercial citrus groves in the Indian River area, South Florida to evaluate the effectiveness of calcium water treatment residue (Ca-WTR) for stabilizing Cu in soil and its subsequent influence on Cu loading in surface runoff and citrus growth.

Methods

Soil and surface runoff samples were monitored over a 3-year period on two field sites under navel orange and Ruby Red grapefruit production.

Results

Soil amendment with Ca-WTR generally raised soil pH and soil available Ca, but decreased available Cu. The mean concentrations of Cu in surface runoff water were reduced by 36 % and 28 % for the navel orange and grapefruit site, respectively. The results of species distribution of Cu in the runoff water using MINTEQ indicated that the application of Ca-WTR decreased the concentrations of free Cu²⁺ by 61 % and 39 % for the two sites. Fruit quality and yields were improved, because of the improved nutrient availability and other soil conditions.

Conclusions

The results indicate that in situ application of Ca-WTR may provide a cost-effective remediation method for the Cu-contaminated soils without affecting citrus production.     

Spraying pyrethroid and neonicotinoid insecticides can induce outbreaks of <Emphasis Type="Italic">Panonychus citri</Emphasis> (Trombidiformes: Tetranychidae) in citrus groves

Panonychus citri (McGregor) (Trombidiformes: Tetranychidae) is one of the main defoliator mites in citrus groves. In Brazil, P. citri was formerly considered a secondary pest, but in recent years, the population levels of this mite have increased in many groves, requiring additional acaricide applications for its control. The population growth of P. citri is associated with the increase in the number of applications of pyrethroid and neonicotinoid insecticides to control insect citrus pests. This study assessed the effects of pyrethroid (deltamethrin, esfenvalerate, λ-cyhalothrin) and neonicotinoid (imidacloprid and thiamethoxam) insecticides on biological, behavioral and demographic parameters of P. citri. None of the insecticides tested affected larval hatching, but deltamethrin, esfenvalerate, and λ-cyhalothrin reduced the survival of larvae and protonymphs. Deltamethrin, esfenvalerate, and λ-cyhalothrin induced a significant increase in the fecundity of surviving females. Pyrethroids also caused repellency and changed feeding and oviposition preferences. In contrast, imidacloprid and thiamethoxam did not affect the survival of immature stages, but imidacloprid significantly increased fecundity. Imidacloprid and thiamethoxam did not cause any repellent effect or changes in the feeding and oviposition preferences. Based on the demographic parameters, deltamethrin, λ-cyhalothrin, and imidacloprid increased R_o, r, and λ, whereas esfenvalerate and thiamethoxam were similar to the control. Therefore, the use of these insecticides (especially deltamethrin, λ-cyhalothrin, and imidacloprid) requires caution, such as avoiding repeated use of these compounds during the periods of P. citri incidence in citrus groves.     

The effect of arabinogalactan proteins on regeneration potential of juvenile citrus explants used for genetic transformation by Agrobacterium tumefaciens

A possible role of arabinogalactan proteins in control of shoot regeneration from stem explants of two citrus cultivars, Carrizo citrange and ‘Duncan’ grapefruit, was investigated. Treatment of explants with (β-d-Glc)₃ Yariv phenylglycoside, able to bind specifically to AGPs, led to a decrease of cumulative regeneration potential of both Carrizo citrange and ‘Duncan’ grapefruit. For Carrizo, lower cumulative regeneration potential on (β-d-Glc)₃ Yariv phenylglycoside-treated explants was the result of both lower number of shoots on the explants that had shoots (explant regeneration potential) and decreased percentage of explants with shoots. In the case of ‘Duncan’, treatment with (β-d-Glc)₃ Yariv phenylglycoside reduced cumulative regeneration potential only by lowering the percentage of explants with shoots, but it did not affect the number of shoots on the explants with shoots. Citrus explants treated with (α-d-Man)₃ Yariv phenylglycoside, which does not bind AGPs, responded similarly to untreated explants. Transformability of cells on the cut ends of explants was also lower for both cultivars following the treatment of explants with (β-d-Glc)₃ Yariv phenylglycoside. Our data suggest that arabinogalactan proteins play important role in processes controlling differentiation and genetic transformation of citrus cells by Agrobacterium.     

Seasonal and yearly change in adult abundance of a predacious ladybird <Emphasis Type="Italic">Serangium japonicum</Emphasis> (Coleoptera: Coccinellidae) and the citrus whitefly <Emphasis Type="Italic">Dialeurodes citri</Emphasis> (Hemiptera: Aleyrodidae) in citrus groves

Serangium japonicum Chapin (Coleoptera: Coccinellidae) chiefly attacks whiteflies. This study monitored the adult occurrence of the ladybird and the citrus whitefly Dialeurodes citri (Ashmead) (Hemiptera: Aleyrodidae) in citrus groves in central Japan using sticky traps, thereby examining temporal relationships in their abundance. Many S. japonicum adults were captured in a pesticide-free grove where D. citri adults were very abundant, with few adults in neighboring (organic, reduced pesticide, and conventional) groves harboring small numbers of D. citri. The whitefly adults exhibited a large peak in numbers in late May to early June. Two peaks of the ladybird adult numbers were detected in late May to early June and late June to mid-July, ?6 to 7 days, and nearly 1 month after the peak in whitefly adult numbers, respectively. The ladybird adults found during the first peak period would be those that visited citrus trees mainly for oviposition, and the adults caught during the second peak period would be those that newly emerged after consuming immature whiteflies at the larval stage. Based on a yearly change in adult numbers in the pesticide-free grove, i.e., a large increase in S. japonicum numbers followed by a rapid decline in D. citri numbers, the ladybird’s role in controlling the whitefly is discussed.     

Susceptibility of Asian citrus psyllid, <Emphasis Type="Italic">Diaphorina citri</Emphasis> (Hemiptera: Liviidae), to the insecticide afidopyropen: a new and potent modulator of insect transient receptor potential channels

A relatively new insecticide chemistry for controlling sucking insects, afidopyropen, was investigated for toxicity against Asian citrus psyllid, Diaphorina citri Kuwayama (Hemiptera: Liviidae). We evaluated the mortality of D. citri eggs, nymphs, and adults treated with afidopyropen using both laboratory-reared and field populations. We also quantified the effects of sublethal doses of afidopyropen on D. citri feeding, host choice selection, and fecundity. For laboratory susceptible adults, the contact LC₅₀, topical application LD₅₀, and leaf dip LC₅₀ were 2.13, 2.00, and 3.08 ng/µL, respectively. For adults collected from a commercially managed citrus grove in Florida, the contact LC₅₀, topical application LD₅₀, and leaf dip LC₅₀ were 1.37, 1.92, and 4.89 ng/µL, respectively. Egg hatch was significantly reduced following exposure to afidopyropen at 100 ng/µL. Furthermore, afidopyropen reduced D. citri nymph survival and adult emergence at concentrations ranging between 0.01 and 100 ng/µL. Diaphorina citri adult feeding decreased on citrus leaves treated with afidopyropen in a concentration-dependent manner as measured indirectly by honeydew excretion, and appeared almost completely inhibited after treatment with 10 and 100 ng/µL solutions of afidopyropen. In choice tests, significantly fewer D. citri adults settled on afidopyropen-treated plants than on control plants at 24, 48, and 72 h after release, with no differences in settling between males and females. Afidopyropen reduced the fecundity of D. citri in a concentration-dependent manner. Collectively, the results suggest that afidopyropen could contribute to the integrated management of D. citri and may therefore be useful in rotational programs to improve resistance management.     

柑橘内生真菌的分离鉴定及其发酵产物对柑橘溃疡病菌的抑制活性

本研究从柑橘抗病品种的健康植株不同组织中分离纯化和鉴定内生真菌,并测定其发酵产物对柑橘溃疡病菌的抑制活性,以明确柑橘抗病品种中内生真菌的组成及其产抗柑橘溃疡病菌活性代谢产物的潜力,为柑橘溃疡病抗菌剂的开发奠定基础。该研究通过组织培养法分离内生真菌,采用形态学和分子生物学方法对其进行鉴定; 基于前期的拮抗预试验结果,选取代表性菌株进行发酵培养,通过乙酸乙酯浸提、真空抽滤、旋转蒸发浓缩制备粗提物; 采用带毒平板涂布法测定不同菌株发酵产物乙酸乙酯提取物对柑橘溃疡病菌的抑制活性。结果表明:(1)共分离得到72株内生真菌,归为2门(Ascomycota、Basidiomycota)、14个属,其中优势属为刺盘孢属(Colletotrichum)、球座菌属(Guignardia)、链格孢属(Alternaria)和镰刀菌属(Fusarium)。(2)不同柑橘品种中内生真菌多样性指数为温州蜜柑(桂林)>沙糖桔(桂林)>沙糖桔(梧州)。(3)不同组织中内生真菌多样性变化因地理位置差异而有所不同,采自桂林的温州蜜柑和沙糖桔均为叶片中的内生真菌的多样性高于枝条,而采自梧州的沙糖桔为叶片中的多样性低于枝条,并且采自梧州的柑橘样品与采自桂林的柑橘样品中的内生真菌相似性低。(4)测定了30株内生真菌乙酸乙酯提取物对柑橘溃疡病菌的抑制活性,其中29株菌株表现出不同程度抑制活性。不同柑橘品种中的优势属的MIC介于0.312 5～10 mg·mL^-1之间,特有属的MIC介于0.156～5 mg·mL^-1,共有属镰刀菌属的MIC介于0.312 5～2.5 mg·mL^-1之间。研究结果表明柑橘抗病品种中内生真菌具有丰富多样性,并且其发酵提取物普遍对柑橘溃疡病菌具有抑制作用。特有属抑菌活性总体优于优势属,共有属镰刀菌属在不同柑橘抗病品种中均具有显著抑菌效果。     

Trail Chemicals of the Convergens Ladybird Beetle, <Emphasis Type="Italic">Hippodamia convergens</Emphasis>, Reduce Feeding and Oviposition by <Emphasis Type="Italic">Diaphorina citri</Emphasis> (Hemiptera: Psyllidae) on Citrus Plants

We investigated feeding and oviposition behavior of the Asian citrus psyllid, Diaphorina citri, when exposed to the foraging trails of the convergens ladybird beetle, Hippodamia convergens. Diaphorina citri females feeding on citrus leaves directly exposed to the ladybird adults or treated with trail extract excreted significantly less honeydew droplets than controls. The trail chemicals of the ladybird beetle also decreased oviposition by D. citri females on citrus. In a no-choice experiment, D. citri females preferred to oviposit on control flush and plants than those with ladybird trail-extract treatments. In two-choice experiments, 68.0% of D. citri released into cages exhibited strong selection preference for settling and eventual oviposition on control plants than plants treated with ladybird trail extract. Diaphorina citri eggs were found on all new leaf flush of control plants, whereas only 29.5% of flush on treatment plants were selected for oviposition. The trail chemical deposited by the convergens ladybird beetle elicits repellency of D. citri feeding and oviposition. Therefore, the trail chemicals my contain components that could be useful for behavior-based management of D. citri and HLB disease by reducing psyllid feeding and oviposition.     

Replacing the wild type <Emphasis Type="Italic">loxP</Emphasis> site in BACs from the public domain with <Emphasis Type="Italic">lox66</Emphasis> using a <Emphasis Type="Italic">lox66</Emphasis> transposon

Background

Chromatin adjoining the site of integration of a transgene affects expression and renders comparisons of closely related transgenes, such as those derived from a BAC deletion series retrofitted with enhancer-traps, unreliable. Gene targeting to a pre-determined site on the chromosome is likely to alleviate the problem.

Findings

A general procedure to replace the loxP site located at one end of genomic DNA inserts in BACs with lox66 is described. Truncating insert DNA from the loxP end with a Tn10 transposon carrying a lox66 site simultaneously substitutes the loxP with a lox66 sequence. The replacement occurs with high stringency, and the procedure should be applicable to all BACs in the public domain. Cre recombination of loxP with lox66 or lox71 was found to be as efficient as another loxP site during phage P1 transduction of small plasmids containing those sites. However the end-deletion of insert DNA in BACs using a lox66 transposon occurred at no more than 20% the efficiency observed with a loxP transposon. Differences in the ability of Cre protein available at different stages of the P1 life cycle to recombine identical versus non-identical lox-sites is likely responsible for this discrepancy. A possible mechanism to explain these findings is discussed.

Conclusions

The loxP/lox66 replacement procedure should allow targeting BACs to a pre-positioned lox71 site in zebrafish chromosomes; a system where homologous recombination-mediated "knock-in" technology is unavailable.