The relative of species pools in determining plant species richness: an alternative explanation of species coexistence?

Explanations of the pattern of species have traditionally relied on small-scale, local processes occurring in ecological time. Differences in species richness have associated with different mechanisms avoiding competition, such as spatiotemporal heterogeneity (weaker competitors may find a more favourable place or time) or environmental stress (competition is assumed to be less intensive under difficult conditions). More recently, large-scale process have been taken into account, raising such questions as: which plant species may potentially grow in a certain community? Are evolutionary processes and species dispersal responsible for the differences between communities? The species-pool theory attempts to answer these general questions, and information about species pools is needed for the design of experiments where the number of species in a community is manipulated.     

Recent records of steppe species in Belarus,first indications of a steppe species invasion?

BELARUS IS SITUATED AT A CROSSROAD OF NATURAL BORDERS OF SPECIES DISTRIBUTIONS: the NE part is situated in a taiga zone, whereas the other part of terrain is in the European forest zone. The distance of Belarus to the steppe zone is about 330 kilometers. This geographical position and the extensive knowledge of its fauna can be used to monitor changes in the distribution of different species. An intensive study of open habitat ground beetles was carried out from 1975-2008 in Belarus, using pitfall traps, quadrate-sampling methods, hand collecting, netting and light traps. In total, more than 130 000 specimens of ground beetles belonging to 169 species were collected from 62 fields and 11 meadows of different types. 217 specimens of Calosoma investigator (Illiger 1798), 2 specimens of Calosoma denticolle (Gebler 1833), and one specimen of Harpalus subcylindricus (Dejean, 1829), Harpalus honestus (Duftschmid 1812) and Zabrus tenebrioides (Goeze 1777) were present in this material. All specimens were macropterous and exclusively caught at fields and waste grounds on sandy soil. Nowadays Belarus is the northernmost location for these species in Eastern Europe. Steppe species most probably migrated to SE Belarus from NE Ukraine, using Dnieper and its river valleys. The shift in the geographic distribution of steppe species during the last thirty years in Belarus have been attributed to a higher frequency of warmer and wetter summers in the last few decades.     

Dominance of Δ5-sterols in eight species of the cactaceae

The sterols from eight species in seven genera of the Cactaceae are 24-alkyl-Δ⁵-sterols. In all eight species, Echinopsis tubiflora, Pereskia aculeata, Hylocereus undatus, Notocactus scopa, Epiphyllum sp., Schlumbergera bridgesii, Opuntia comonduensis and O. humifusa, the dominant sterol is sitosterol (24α-ethylcholest-5-en-3β-ol) at 66–87% of the total sterol composition with the 24ξ-methylcholest-5-en-3β-ol present at 8–33%. Stigmasterol (24α-ethylcholesta-5,22E-dien-3β-ol) is present at 2–8% of the total sterol in P. aculeata, H. undatus, N. scopa and Epiphyllum sp. whereas cholesterol (cholest-5-en-3β-ol) is present in six species at levels of <0.1–5.0%. Avenasterol (24-ethylcholesta-7,24(28)Z-dien-3/gb-ol) and sitostanol (24α-ethyl-5α-cholestan-3β-ol) are each present in two species.     

Alien plant species distribution in the European Alps: influence of species’ climatic requirements

The paper provides the first estimate of the role of abiotic and anthropogenic variables driving both alien plant species richness and composition covering the whole region of the European Alps. To establish and spread in a new area, alien plants must be able to tolerate the prevailing climatic conditions. We therefore tested the hypothesis that climatic requirements modified by bioclimatic origin and elevational distribution influence the distribution of alien plants in the Alps. Despite most alien plant species showing a relatively restricted distribution in the Alps, some regions, however, were already more strongly invaded. Most of these species were adapted to warmer conditions, probably constrained by climatic factors. Environmental heterogeneity was the most important predictor of alien plant species richness, followed by anthropogenic disturbance. Due to the political/artificial delineation of the administrative districts in the Alps (i.e., ignoring ecological conditions) we did not find a direct influence of climatic constraints on alien distribution. Anyway, northern Holarctic alien species showed a broader climatic tolerance and the capability to grow across a wide environmental range. Our results also reveal a strong influence of human pressure on warmer tropical species, despite their low adaptability to anthropogenic habitats. To this aim, managers would profit from early warnings to prevent future invasions. Considering bioclimatic origin, our study can aid in identifying potentially invasive species in a more regional setting.     

Is vascular plant species diversity a predictor of bryophyte species diversity in Mediterranean forests?

This study aimed to (i) investigate the congruence among the species composition and diversity of bryophytes and vascular plants in forests; (ii) test if site prioritization for conservation aims by the maximization of the pooled number of vascular plant species is effective to maximize the pooled number of bryophyte species. The study was performed in six forests in Tuscany, Italy. Four-hundred and twenty vascular plant species (61 of which were woody) and 128 bryophyte species were recorded in 109 plots. Despite the good predictive value of the compositional patterns of both woody plants and total vascular with respect to the compositional pattern of bryophytes, the species richness of the latter was only marginally related to the species richness of the former two. Bryophyte rare species were not spatially related to rare plant species and neither coincided with the sites of highest plant species richness. The species accumulation curves of bryophytes behaved differently with respect to those of woody plants or total vascular plants. Reserve selection analysis based on the maximization of the pooled species richness of either woody plants or total vascular plants were not effective in maximizing the pooled species richness of bryophytes. This study indicates that species diversity of vascular plants is not likely to be a good indicator of the bryophyte species diversity in Mediterranean forests.     

Occurrence and expression of β-galactosidase in dextran-producing Leuconostoc species

The occurrence and expression of -galactosidase among various dextran-producing Leuconostoc strains was determined. -Galactosidase was detected from four of twelve Leuconostoc strains tested. -Galactosidase in L. mesenteroides was induced by lactose and was repressed by glucose. Growth curves of L. mesenteroides on lactose indicated extended lag and late growth phases that were shortened when the inoculum was preexposed to lactose.     

A genetic mechanism of species replacement in European waterfrogs?

Introduced Rana ridibunda currentlyreplace the native waterfrogs R. lessonaeand R. esculenta in several areas ofcentral Europe. The unusual reproductive systemin waterfrogs of the Rana esculentacomplex suggests that this replacement may bedriven by a genetic mechanism: Ranaesculenta, a hybrid between R. ridibundaand R. lessonae, eliminates the lessonae genome from the germline and clonallytransmits the ridibunda genome(hybridogenesis). Hybrids form mixedpopulations with R. lessonae (L-E-system)in which they persist by backcrossing with theparental species. Matings between hybrids areunsuccessful, because their ridibundagenomes contain fixed recessive deleteriousmutations. When introduced into a L-E-system,R. ridibunda can mate with both nativetaxa, producing R. ridibunda offspringwith R. esculenta, and R. esculentaoffspring with R. lessonae (primaryhybridizations). If primary hybrids arehybridogenetic, they produce viable R.ridibunda offspring in matings with otherhybrids, because their clonal genomes areunlikely to share the deleterious allelespresent in the ancient clones. Thus, R.ridibunda will increase in the population atthe expense of both native taxa, eventuallyleaving a pure R. ridibunda population.We provide three lines of evidence for thisprocess from a currently invaded population inSwitzerland: (1) Primary hybridizations takeplace, as roughly 10% of hybrids in thepopulation possess ridibunda genomesderived from the introduced frogs. (2)Hybridogenesis occurs in primary hybrids,although at a low frequency. (3) Many hybrid ×hybrid matings in the population indeed produceviable offspring. Hence, the proposed geneticmechanism appears to contribute to the speciesreplacement, although its importance may belimited.     

Co-variation and indicators of species diversity: Can richness of forest-dwelling species be predicted in northern boreal forests?

Design and establishment of ecologically good networks of conservation areas often requires quick assessments of their biodiversity. Reliable indicators would be useful when doing such assessments. In order to explore the potential indicators for species richness in boreal forests, we studied (1) the co-variation of species richness and composition of species assemblages among beetles, polypores, birds and vascular plants, (2) the relationships between species richness and four boreal forest site types, (3) the relationship between species richness and forest physical structure and (4) the suitability of potential indicator groups within the four taxa to predict the species richness generally. The data show that there are probably not a single taxonomic or forest structural characteristic to be used as a general biodiversity indicator or surrogate for all the species. The correlations in species richness among the four taxa studied were low. However, group-specific indicators were obvious: forest site type was a good surrogate for vascular plant richness, and quantity and quality of dead wood predicted the species richness of polypores. The results support the view that different indicators shall be used for different forest types and taxonomic groups. These indicators should facilitate relatively rapid methods to assess biodiversity patterns at the forest stand level.     

The shape of things to come in the study of the origin of species?

Perhaps Darwin would agree that speciation is no longer the mystery of mysteries that it used to be. It is now generally accepted that evolution by natural selection can contribute to ecological adaptation, resulting in the evolution of reproductive barriers and, hence, to the evolution of new species (Schluter & Conte 2009 ; Meyer 2011 ; Nosil 2012 ). From genes that encode silencing proteins that cause infertility in hybrid mice (Mihola et al. 2009 ), to segregation distorters linked to speciation in fruit flies (Phadnis & Orr 2009 ), or pollinator‐mediated selection on flower colour alleles driving reinforcement in Texan wildflowers (Hopkins & Rausher 2012 ), characterization of the genes that drive speciation is providing clues to the origin of species (Nosil & Schluter 2011 ). It is becoming apparent that, while recent work continues to overturn historical ideas about sympatric speciation (e.g. Barluenga et al. 2006 ), ecological circumstances strongly influence patterns of genomic divergence, and ultimately the establishment of reproductive isolation when gene flow is present (Elmer & Meyer 2011 ). Less clear, however, are the genetic mechanisms that cause speciation, particularly when ongoing gene flow is occurring. Now, in this issue, Franchini et al. ( 2014 ) employ a classic genetic mapping approach augmented with new genomic tools to elucidate the genomic architecture of ecologically divergent body shapes in a pair of sympatric crater lake cichlid fishes. From over 450 segregating SNPs in an F2 cross, 72 SNPs were linked to 11 QTL associated with external morphology measured by means of traditional and geometric morphometrics. Annotation of two highly supported QTL further pointed to genes that might contribute to ecological divergence in body shape in Midas cichlids, overall supporting the hypothesis that genomic regions of large phenotypic effect may be contributing to early‐stage divergence in Midas cichlids.     

On the function of the various quinone species in Escherichia coli

The respiratory chain of Escherichia?coli contains three quinones. Menaquinone and demethylmenaquinone have low midpoint potentials and are involved in anaerobic respiration, while ubiquinone, which has a high midpoint potential, is involved in aerobic and nitrate respiration. Here, we report that demethylmenaquinone plays a role not only in trimethylaminooxide-, dimethylsulfoxide- and fumarate-dependent respiration, but also in aerobic respiration. Furthermore, we demonstrate that demethylmenaquinone serves as an electron acceptor for oxidation of succinate to fumarate, and that all three quinol oxidases of E.?coli accept electrons from this naphtoquinone derivative.     

Distribution of diurnal primate species in Togo and Bénin

The Dahomey Gap, a strip of forest-savanna mosaic that interrupts the lowland rainforests of West Africa, is supposed to have acted as a natural barrier to the distribution of forest-dwelling mammals. However, few thorough mammal surveys have been conducted in this region. This study intended to gather distributional data and help clarify the distribution limits of diurnal primates occurring within this 'Gap'. Southern Togo and Bénin were surveyed between June and November 2003. The surveys consisted of interviews with hunters and guards from parks and reserves, and walking surveys of forests. As a result, seven diurnal primate species are listed for Togo and Bénin.     

Are periodic (intra-annual) tangential bands of vessels in diffuse-porous tree species the equivalent of flood rings in ring-porous species? Reproducibility and cause

Tree rings from ring-porous species have often been used as flood proxy. Many ring-porous species produce characteristic flood rings in response to stem submersion during vessel formation. Flood rings have earlywood vessels that are more numerous and/or of smaller cross-sectional area than “normal” rings. This study aimed at determining if diffuse-porous balsam poplar and trembling aspen, like ring-porous black ash, produce anatomically distinct annual tree rings in response to flooding. More specifically, we asked (i) if periodic tangential bands of vessels (hereafter PTBV) could be as easily identified/quantified as flood rings and (ii) if PTBV could be associated with spring flooding. Sampling of black ash, balsam poplar and trembling aspen trees took place along a flood exposure gradient in the floodplain of Lake Duparquet in northwestern Québec. Two observers recorded flood rings and PTBV. Consistency between observers was greatest when identifying flood rings. In both diffuse-porous species, PTBV occurred less abundantly than flood rings in black ash. They also occurred less often in balsam poplar than in trembling aspen. Years in which PTBV were initiated early in the growing season were associated with years in which flood rings occurred. Like flood rings, early occurring PTBV were more abundant in springs characterized by high mean river discharge, extensive snow cover, cold temperatures and heavy precipitation. Early-occurring PTBV dominated in flooded sites and late-occurring ones dominated in the control site. However, PTBV of the late-types were also observed in both flood exposures indicating that spring flood may not be the only factor modulating their formation. While flood rings seem to be associated with a change in the transport of growth regulators resulting from stem submergence and excess water, PTBV may be reflective of rhythmic alterations in the transport of growth regulators resulting from either water excess or deficit. Despite promising findings, many questions remain before PTBV in riparian diffuse-porous species can be widely used as a flood proxy. Why do species and individual trees differ in their ability to record them? What is the full range of environmental conditions triggering PTBV’s formation especially in unflooded sites and in the late growing season?     

Do species of Crataegus sect. Sanguineae occur in Iran?

Results of a revision of Iranian species of Crataegus section Sanguineae are presented here. Previously, two species of this section, C. sanguinea Pall. and C. babakhanloui Khat., were reported from Iran. However, detailed analyses of morphological and micro‐morphological characteristics, as well as phytogeographical data, could not confirm this information; herbarium specimens recognised as C. sanguinea appeared to be C. pentagyna Waldst. & Kit. (C. sect. Pentagynae), while C. babakhanloui should be included in the C. section Crataegus. The section Sanguineae is represented in Iran only by C. wattiana Hemsl. & Lace, the presence of which is reported here for the first time.     

Allometry of aboveground biomasses in mangrove species in Itamaracá, Pernambuco, Brazil

Allometric equations to estimate aboveground biomass (AGB) and plant part biomasses (PPB) of three mangrove species, Rhizophora mangle, Avicennia schaueriana, and Laguncularia racemosa, were determined in Itamaracá, Pernambuco, Brazil (7°48′44″S and 34°49′39″W). Twenty-three to thirty-six trees of each species, ranging in height (H) from 1.6 to 11.8 m and in diameter, at breast height or above prop roots (D), from 2 to 21 cm, were measured, cut, and separated into stems, branches, leaves, and prop roots. Biomass proportions in each tree part were similar among species, excluding prop roots: stems 37–47%, branches 41–46%, and leaves 11–17%. Prop roots represented 37% of AGB in R. mangle. Tree size had a significant but not large influence on biomass distribution among plant parts: as stem diameters increased the proportions allocated to leaves decreased and those to stems and branches increased. AGB and PPB were significantly related to D and D² × H and the best fittings were obtained with power equations. A few equations from literature fitted the data reasonably well for AGB of one or two of the species but resulted in large errors for the others. Applying the equations to previous measurements of tree diameters in a sample area, AGB for the mangrove site was estimated at 105 Mg ha⁻¹, with 78, 19, and 3% corresponding to biomasses of R. mangle, L. racemosa, and A. schaeuriana trees, respectively.     

A study of the metabolism of l-αγ-diaminobutyric acid in a Xanthomonas species

1. l-αγ-Diaminobutyric acid is metabolized in Xanthomonas sp. to aspartic β-semialdehyde, aspartic acid and oxaloacetic acid. 2. Aspartic β-semialdehyde is formed from diaminobutyric acid by a pyruvate-dependent γ-transamination. 3. The transaminase has a pH optimum of 9 and exhibits a high degree of substrate specificity, as analogues of diaminobutyric acid and pyruvate are inert in the system. The transaminase is inhibited by carbonyl-binding agents such as hydroxylamine. 4. Aspartic acid is formed from aspartic β-semialdehyde by an NAD⁺-dependent dehydrogenation. 5. The dehydrogenase has a pH optimum of 8·5 and is a thiol enzyme. It is specific for aspartic β-semialdehyde but analogues of NAD⁺ such as 3-acetylpyridine–adenine dinucleotide and deamino-NAD are partly active in the system. 6. The significance of these reactions is discussed in relation to diaminobutyric acid metabolism in plants and mammalian systems.     

Are allozymes differing in substrate specificity involved in the evolution of Silene species?

Summary The concerted action of two flavone-skeleton modifying genes, P and Me, and the alleles of three independently segregating loci g, gl and fg involved in flavone-glycosylation lead to the 33 different flavones so far identified in Silene. The alleles of the different loci involved in flavone-glycosylation control enzymes which differ in substrate specificity, a phenomenon not often described in higher organisms. The alleles of the different loci are variously distributed over the different species. The possible evolutionary implications of these distributions are discussed.     

Are active oxygen species involved in induction of β-carotene in Dunaliella bardawil?

The purpose of this work was to test whether induction of massive -carotene synthesis in the alga Dunaliella bardawil is triggered by oxygen radicals. The following results were obtained: (i) The induction of -carotene synthesis is preceded by a lag period of about 4 h during which the cells swell and photosynthesis is partially inhibited, (ii) Addition of promoters of oxygen radicals or of azide (an inhibitor of catalase and superoxide dismutase) during the induction period, under conditions which are suboptimal for massive -carotene accumulation, greatly enhances -carotene synthesis, photodegradation of chlorophyll and inhibition of photosynthesis, (iii) High irradiance, which induces massive -carotene accumulation, also induces a high catalase activity. It is suggested that photosynthetically produced oxygen radicals are involved in triggering massive -carotene accumulation in D. bardawil.     

Is parasitism of numerically dominant species in macrolepidopteran assemblages independent of their abundance?

Refuge theory proposes that a determinant of species richness (and percent parasitism) is the presence of host refuges. Plant structural refuges are good predictors of species richness for endophytic herbivores, but not for exophytic herbivores. For exophytic herbivores other traits such as relative abundance may provide refuge from parasitism. Using unbiased data on both relative abundance and larval parasitism of species in macrolepidopteran assemblages we tested the null hypothesis that percent parasitism was independent of abundance. Numerically subdominant species do not gain refuge from parasitism by persisting at low abundance. Parasitism was not different from what would be expected based on their numbers. Among numerically dominant species there was, nevertheless, a significant positive association between abundance and parasitism rate. However, dominant herbivores displayed high levels of parasitism even in the years when their abundance was low relative to other years. This suggests that dominant species may possess other traits that enhance their susceptibility to parasitoids.     

Importance of species diversity in the revegetation of Alberta’s northern fescue prairies

Restoration of grassland ecosystems is critical to the provision of ecosystem services, however, legacies of historic disturbances pose a challenge to grassland restoration. In the northern Great Plains of North America, continued fragmentation and disturbance of northern fescue prairies has prompted more stringent criteria to regulate the revegetation of native prairies disturbed by industrial activities. Here, we evaluate methods of revegetating northern fescue prairies, disturbed by energy development, and test the hypothesis that higher richness of species seeded within disturbed areas improves the structure, diversity, and composition of revegetated communities. Our results demonstrate that disturbed northern fescue prairies are able to recover their structural elements, including vegetative and ground cover and plant litter, irrespective of the number of species in the seed mixes, even though revegetated areas remained similar in all measures of community diversity. Despite this, revegetated areas remained compositionally different from adjacent native prairies, 7 years following seeding treatments. Based on our observations, the persistent differences in the species composition of disturbed and undisturbed prairies highlight that all efforts should be practiced to minimize the scale of disturbance of northern fescue prairies through energy development.