Holocene paleoclimate change in the Antarctic Peninsula: evidence from the diatom,sedimentary and geochemical record

Holocene, marine deposition in Lallemand Fjord, Antarctic Peninsula, is reinterpreted using statistical analyses (cluster analysis, analysis of variance, nonmetric multidimensional scaling and multiple regression) to compare diatom assemblages and the primary sedimentological proxies. The assemblages have been deposited in a variable sea ice zone over the last ca. 10,500 yr BP in response to a climate change. In the Late Pleistocene/early Holocene (10,580–7890 yr BP), a sea ice diatom assemblage was deposited in the presence of a retreating ice shelf at the head of the fjord. In the mid Holocene (7890–3850 yr BP), an open water assemblage was deposited and sea ice cover was at a minimum. We associate the assemblage with climatic warming, which characterizes much of the Antarctic Peninsula during this time. A second sea ice assemblage, different from that deposited in the early Holocene, has been deposited in Lallemand Fjord since the late Holocene (<3850 yr BP). The assemblage reflects Neoglacial cooling, an increase in sea ice extent and/or an advance of the Müller Ice Shelf.     

Holocene foraminiferal assemblages from Firth of Tay,Antarctic Peninsula: Paleoclimate implications

The 77 m sediment core from Firth of Tay provides complete record of glacial retreat and Holocene climate change on the Weddell Sea side of the Antarctic Peninsula that began ~ 9400 yr BP. Benthic foraminiferal data indicate significant environmental changes as recorded at ~ 600 m water depth at the drill site. Three foraminiferal assemblages (FAs): Globocassidulina spp.–Fursenkoina fusiformis FA, Miliammina arenacea FA, and Paratrochammina bartrami–Portatrochammina antarctica FA reflect increasingly glacier-distal conditions. They started with most glacier-proximal conditions that lasted until ~ 8800 yr BP, which is indicated by Cribroelphidium cf. webbi, and continued with elevated input of coarse glacial sediment until ~ 7750 yr BP. The Mid-Holocene Climatic Optimum between 7750 and 6000 yr BP appears to be the time of highest primary production, which led to higher corrosiveness of bottom waters, and biased species composition of the M. arenacea FA. It was terminated by minor cooling. The Neoglacial, that took place after ~ 3500 yr BP, is marked by an increase in P. bartrami and P. antarctica, the major constituents of the P. bartrami–P. antarctica FA. This FA became periodically dominant after ~ 900 yr BP indicating increasingly glacier-distal conditions due to cooling coinciding with increasing aridity, rising altitude of the glacial equilibrium line, and less glacial influence on marine biota. Episodic high-abundances of a fourth foraminiferal assemblage (Globocassidulina biora FA) that occurs practically throughout the core is difficult to interpret explicitly. Although there are some concerns if G. biora FA represents in situ fauna, it appears to be an opportunistic fauna that dominated during periods of more glacial sediment input and sediment remobilization leading to better carbonate preservation.     

Foraminiferal assemblage indices: A comparison of sediment and reef rubble samples from Conch Reef,Florida, USA

Benthic foraminiferal assemblages are increasingly utilized as indicators of water and sediment quality in coastal-marine environments. Most reef-dwelling foraminifers live on firm substrata such as reef or phytal surfaces, while most assessments have examined assemblages from sediments. This case study compared relative abundances of total foraminiferal-shell assemblages between sediment and phytal/rubble samples collected from one reef within one week. A total of 117 species within 72 genera were identified, with the same taxa in both sample sets in different proportions. Larger benthic foraminifers and some agglutinated taxa were concentrated about 1.5–3 fold in sediment samples, while nearly two-thirds of small, fragile shells were lost. Several common indices were compared, including Taxonomic Richness (number of genera), Shannon (H), Simpson's (D) and Fisher (α) diversity indices, Evenness (E), and the FORAM Index (FI). Highly significant differences (p < 0.001) between shell assemblages from 13 sets of phytal/rubble substrata and sediments were found in mean number (± standard deviation) of genera (49 ± 4 vs. 34 ± 10) and mean FI (5.6 ± 0.8 vs. 3.6 ± 0.4); both reflecting greater relative abundances of smaller foraminifers in the rubble samples. Fisher diversity was marginally significant (p = 0.05); other indices showed no significant differences between sample types. Although assessment of total assemblages is substantially less costly than distinguishing between specimens that were live or dead when collected, many researchers report those distinctions. The results of our study provide insight that can assist interpretations of studies that use live assemblages to calculate the FI, rather than total assemblages for which it was originally developed.     

Diatoms are better indicators of urban stream conditions: A case study in Beijing,China

Urbanization dramatically affects hydrology, water quality and aquatic ecosystem composition. Here we characterized changes in diatom assemblages along an urban-to-rural gradient to assess impacts of urbanization on stream conditions in Beijing, China. Diatoms, water chemistry, and physical variables were measured at 22 urban (6 in upstream and 16 in downstream) and 7 rural reference stream sites during July and August of 2013. One-way ANOVA showed that water physical and chemical variables were significantly different (p < 0.05) between urban downstream and both reference and urban upstream sites, but not between reference and urban upstream sites (p > 0.05). Similarly, structural metrics, including species richness (S), Shannon diversity (H′), species evenness (J′) and Simpson diversity (D′), were significantly different (p < 0.05) between urban downstream and both reference and urban upstream sites, but not (p > 0.05) between reference and urban upstream sites. However, diatom assemblages were very different among all sites. Achnanthidium minutissima was a consistent dominant species in reference sites; Staurosira construens var. venter and Pseudostaurosira brevistriata were the dominant species in urban upstream sites; and Nitzschia palea was the dominant species in urban downstream sites. Clustering analyses based on the relative abundance of diatom species, showed all the samples fit into three groups: reference sites, urban upstream sites, and urban downstream sites. Canonical correspondence analysis (CCA) and Monte Carlo permutation tests showed that concentration of K⁺, EC, TN, Cl⁻ and pH were positively correlated with relative abundance of dominant diatom species in urban downstream samples; WT and F⁻ were correlated with reference and urban stream diatom composition. Our results demonstrate that the composition of diatom species was more sensitive to urbanization than the water physical and chemical parameters, and that diatom assemblage structure metrics more accurately assessed water quality. Some species, such as Amphora pediculus and Cocconeis placentula were among the dominant species in low nutrients stream sites; however, they were considered to be high nutrient indicators in some streams in USA. We suggest using caution in applying indicator indices based on species composition from other regions. It is necessary to build a complete set of diatom species data and their co-ordinate environment data for specific regions.     

Establishing expectations for pan-European diatom based ecological status assessments

The European Union (EU) Water Framework Directive depends, for effective implementation, on Member States (MSs) agreeing to a concept of the unimpacted “reference” state, which will then provide the “expected” value in Ecological Quality Ratio (EQR) calculations. Reference assemblages of organism groups will, in turn, vary, due to geological, hydrological, climatic, physicochemical and biological factors. Member States tackle this by establishing “types” which share common characteristics. However, for the purposes of ensuring consistent application, broad transboundary types were also established within five Geographical Intercalibration Groups (GIGs, referred to here as “regions”) as part of the EU's intercalibration exercise. In this paper, we evaluate these types using river diatom assemblages and also provide reference threshold values for two common metrics used in pan-European diatom assessments. A database was assembled, representing 14 EU Member States from Ireland and Portugal in the West, to Estonia and Cyprus in the East, in order to explore biogeographical patterns in assemblages unaffected by anthropogenic pressures. Multivariate analyses were used to examine this pattern and its relationship with geographic, typological and abiotic parameters. After taxonomic harmonisation, NMDS ordination of samples indicated weak differences in assemblage composition among regions. ANOSIM analyses, in turn, indicated that MS was the best factor to group similar samples whereas alkalinity, recognised as the primary environmental variable structuring diatom communities, although significant, explained less variability in the dataset. This, we believe, reflects the importance of methodological factors other than taxonomy (e.g. counting protocol, sample season) that may be constant within a MS but which vary between MSs. When two diatom metrics, the TI and IPS, were applied to the data, differences in the distribution of the metric scores between MS were generally not statistically significant even though some differences between regions were apparent. A trend of increasing values of TI (decreasing values of IPS) was observed in the sequence: Nordic < Alpine < Mediterranean < Central-Baltic < Eastern Continental regions. Additionally, some differences were observed among types within the Mediterranean and Nordic regions, though not for other regions. The data used in this exercise provides us with a region and, in some cases, a type specific benchmark dataset against which national reference data can be compared.     

Spatial factors contribute to benthic diatom structure in streams across spatial scales: Considerations for biomonitoring

Diatoms are widely used in the biological monitoring of streams because they are strong responders to environmental change, but dispersal and spatial factors can play important and potentially confounding roles in the presence, absence, and abundance of species along with characterizing species–environment relationships. To examine how spatial factors affect diatom community structure and biomonitoring, multiple scales were sampled including the Western Allegheny Plateau (n = 58), Leading Creek watershed (n = 18), and the adjacent Shade River watershed (n = 21) in southeast Ohio. Partitioning of spatial, environmental, and spatially-structured environmental variation was conducted on diatom assemblages and on diatom metrics used in biomonitoring. At the regional scale, diatom assemblages and metrics had strong relationships with agricultural (e.g., significant correlations with nutrients, conductivity, and pasture/row crops in the watershed) and alkalinity gradients. Diatom assemblages and metrics in both watersheds were strongly associated with acid mine drainage (AMD) impacts, and when spatial factors were set as covariables in CCAs, relationships with AMD gradients became even stronger, indicating the need to consider how spatial factors could reduce the strength of diatom-environment relationships. Metrics calculated at all scales had very little variation explained exclusively by spatial factors, likely because multiple species are combined into a simplified metric that reduces the effects of species dispersal. Local environmental variables accounted for 57, 42, and 42% of the total variation explained (TVE), and spatial variables accounted for 28, 31, and 37% of the TVE in the regional, Leading Creek, and Shade River datasets, respectively. The amounts of variation in diatom assemblages explained solely by spatial factors at these scales were substantial and similar to what has been reported at continental, national, and large regional (Level I Omernik ecoregions) scales (approximately 1/3 of TVE). Although amounts of variation explained are similar across scales, processes underlying the spatial structure likely differ. In addition to describing ecological patterns, recognizing the potential influence of spatial factors could improve the identification and management of environmental problems at a range of scales, as well as aid in the development of new research questions and hypotheses aimed at exploring factors that could explain portions of the spatially explicit variation.     

Diatom taxa and assemblages for establishing nutrient criteria of lakes with anthropogenic hydrologic alteration

Stressor-response models offer guidance for concentration-based nutrient criteria in lakes under human intervention. Diatom-based statistics from biological responses were incorporated to derive taxon-specific and community-level change points (thresholds) of phosphorous and nitrogen in 77 Yangtze floodplain lakes. Diatom metrics relating with conductivity were adopted as response variables, since conductivity explained the maximum variation (38.1%) in diatom assemblages via Bootstrapped regression trees. Nonparametric change-point analysis and Threshold Indicator Taxa ANalysis showed threshold responses of diatom community structure at 0.05–0.08 mg TP/L in connected lakes and 0.02–0.04 mg TP/L in isolated lakes. Distinct community change points of sensitive diatoms occurred at 0.96–1.63 mg TN/L in connected lakes and 0.52–0.63 mg TN/L in isolated lakes. Diatom community structures of tolerant taxa were substantially altered beyond 0.22–0.23 mg/L in connected lakes and 0.52–0.69 mg NO_x/L in isolated lakes. Hydrological river-lake connectivity differed significantly in ecological nutrient criteria with more TN/TP criteria and less NO_x criteria in connected lakes. Given the ecological significance and biological integrity, diatom-based statistics can provide more reliable change points (thresholds) for nutrient criteria than Chl a-nutrient relationships.     

Ecology and distribution of diatoms in Biscayne Bay,Florida (USA): Implications for bioassessment and paleoenvironmental studies

The spatial and temporal distribution of planktonic, sediment-associated and epiphytic diatoms among 58 sites in Biscayne Bay, Florida was examined in order to identify diatom taxa indicative of different salinity and water quality conditions, geographic locations and habitat types. Assessments were made in contrasting wet and dry seasons in order to develop robust assessment models for salinity and water quality for this region. We found that diatom assemblages differed between nearshore and offshore locations, especially during the wet season when salinity and nutrient gradients were steepest. In the dry season, habitat structure was primary determinant of diatom assemblage composition. Among a suite of physicochemical variables, water depth and sediment total phosphorus (STP) were most strongly associated with diatom assemblage composition in the dry season, while salinity and water total phosphorus (TP) were more important in the wet season. We used indicator species analysis (ISA) to identify taxa that were most abundant and frequent at nearshore and offshore locations, in planktonic, epiphytic and benthic habitats and in contrasting salinity and water quality regimes. Because surface water concentrations of salts, total phosphorus, nitrogen (TN) and organic carbon (TOC) are partly controlled by water management in this region, diatom-based models were produced to infer these variables in modern and retrospective assessments of management-driven changes. Weighted averaging (WA) and weighted averaging partial least squares (WA-PLS) regressions produced reliable estimates of salinity, TP, TN and TOC from diatoms (r² = 0.92, 0.77, 0.77 and 0.71, respectively). Because of their sensitivity to salinity, nutrient and TOC concentrations diatom assemblages should be useful in developing protective nutrient criteria for estuaries and coastal waters of Florida.     

Late Eocene sea retreat from the Tarim Basin (west China) and concomitant Asian paleoenvironmental change

The Paleogene sediments of the southwest Tarim Basin along the West Kunlun Shan in western China include the remnants of the easternmost extent of a large epicontinental sea. This shallow sea once extended across the Eurasian continent before it retreated westward and eventually separated as the Paratethys Sea. Climate modeling results suggest that this sea retreat is an equally important forcing mechanism as the Tibetan plateau uplift in the aridification of the Asian continental interior and the intensification of the Asian monsoon system. The age and paleogeography of the retreat are poorly constrained, hindering the understanding of its cause and paleoenvironmental impacts. This study reports litho- and biostratigraphic results from two sections recording the last major regression out of the Tarim Basin that is expressed by a regional transition from marine clastics and limestones to continental red-beds. Rich micro- and macrofossil assemblages, including benthic foraminifera, ostracods, bivalves, calcareous nannofossils and organic walled dinoflagellate cysts (dinocysts), indicate a shallow, proximal and marine environment. Strong similarity to assemblages known from Central Asia and Europe confirms that surface–ocean connections extended across Eurasia from the Tarim Basin to the western Tethys during the latest Eocene. Moreover, the recovered fossil associations date the last marine sediments as earliest Priabonian in age (~ 37 Ma; overlap between dinoflagellate Mps Interval Zone and calcareous nannofossil Zone CP 14). The retreat of the sea from the Tarim Basin is time-equivalent with the sea level lowstand at the Bartonian–Priabonian boundary but pre-dates both the Oligocene–Miocene regional uplift of the Pamir mountains and Kunlun Shan and the major eustatic sea-level falls of the Eocene–Oligocene Transition (~ 34 Ma) and mid-Oligocene (~ 30 Ma), which are usually held responsible for the sea retreat. Furthermore, a concomitant and significant aridification step occurs at ~ 36.6 Ma (top of chron C17n.1n) as recorded by regional sedimentary records of the Xining Basin along the northeastern Tibetan Plateau, suggesting that the Tarim Sea served as a significant moisture contributor for the Asian interior.     

Diatom biomonitoring of streams: Reliability of reference sites and the response of metrics to environmental variations across temporal scales

Benthic diatoms are widely used indicators of human impacts on stream ecosystems because they are very responsive to changing environmental conditions. However, little research has explicitly focused on their reliability with regards to temporal variation in assemblage structure and environmental conditions. We examined variability in diatom-environment relationships at bi-weekly, monthly, and yearly time scales from 7 reference, 7 agricultural, and 2 acid mine drainage (AMD)-impacted streams, and how nutrient and pH fluctuations may affect the interpretation of diatom metrics and the Diatom Model Affinity (DMA) index. Reference streams had less bi-weekly variability in NO₃-N concentrations than non-reference streams. The % eutraphentic diatoms and DMA scores were more strongly correlated with seasonal means of NO₃-N and PO₄-P concentrations than with same day concentrations. Most nutrient indicator metrics had strong correlations with watershed land use. All 14 non-AMD streams experienced substantial increases in NO₃-N and decreases in temperature from November to May, which were associated with high species turnover, substantial changes in community structure, reduced diversity and richness, increased relative abundances of high nutrient diatoms, and decreases in low nutrient diatoms and DMA scores. The % acidophilic diatoms and DMA scores were significantly correlated with increased pH associated with greater precipitation at AMD sites from December to April (r = ?0.77, r = 0.62, respectively; P < 0.01). Yearly, DMA scores for all reference streams were consistently in the minimally impaired category, whereas scores for non-reference streams varied among impairment categories. Reference sites serve as reliable benchmarks for diatom ecological integrity during the summer. In this region, June to October is a recommended time period for diatom sampling in monitoring programs because subsequent shifts in hydrologic regimes, nutrients, and diatom assemblages occurred, affecting all sites and masking among stream differences attributable to agricultural land uses.     

Response in root morphology and nutrient contents of Myriophyllum spicatum to sediment type

Sediment may play an important role during the submerged macrophyte decline in the eutrophication progress. In order to investigate the response in root morphology and nutrient contents of submerged macrophytes Myriophyllum spicatum to sediment, five sediment types were treated and used (five types of sediment were used in the experiment: treatment 1 was nature sediment + sand, a 50:50 (v/v) mixture, treatment 2 was the studied sediment only, treatment 3 was sediment + nitrogen (N, NH₄Cl 400 mg kg^?1), treatment 4 was sediment + phosphorus (P, NaH₂PO₄ 300 mg kg^?1); treatment 5 was sediment + phosphorus (P, NaH₂PO₄ 600 mg kg^?1)). The results show that the root N content was only significantly affected by adding N in sediments and P was elevated by adding N and P. The root mass and its percentage increased at first, the peak values were reached at 35 d, and then decreased. The root growth was restrained by adding sand and N in sediments, root senescence process was delayed at the later experimental time by adding P in sediments. The increase of root volume showed a similar trend to that of root growth, except for plant with P addition where root volume remained high after 35 d. The root volume decreased while the main root number increased significantly by adding sand in sediments. The mean root length and main root diameter were reduced by adding P in sediments. The compatible sediment nutrient condition is necessary to restore submerged macrophytes in a degraded shallow lake ecosystem, and the effect of sediment on the root morphology and nutrient content is one of the important aspects restricting the restoration of submerged macrophytes.     

Marine sediments from southeastern Brazilian continental shelf: A 1200 year record of upwelling productivity

A sediment core from the Cabo Frio coastal shelf (?23.19 S, ?41.8 W; 117 m depth), was analyzed for TOC, C/N ratio, organic petrography and planktonic foraminiferal content to evaluate variations in local productivity caused by changes in upwelling intensity and its relation to regional and global climatic variations during the last millennium. The Cabo Frio core recorded the last 1200 years of sedimentation, with rates varying from 0.11 to 0.32 mm yr^?1. Foraminiferal and organic geochemical analyses indicate the occurrence of three distinct periods of productivity. From 850 AD until 1070 AD, foraminifera fluxes consisting primarily of Turborotalita quinqueloba indicate stronger South Atlantic Central Water (SACW) transport onto the shelf, which induced high biological productivity that was also recorded by high TOC and marine palynomorphs content and a low C/N atomic ratio. This period coincided with a northward displacement of the atmospheric Intertropical Convergence Zone (ITCZ) and South Atlantic High (SAH) systems driven by positive temperature anomalies in the North Atlantic Ocean during the Medieval Climate Anomaly (MCA). From 1070 until 1500 AD, low TOC flux and planktonic foraminifera fluxes and high C/N atomic ratios suggest a reduction in marine productivity, probably driven by reduced transport of SACW associated with the southward displacement of the SAH and weakening of northeasterly winds. The period between 1500 and 1830 AD, which corresponds to the Little Ice Age, is marked by increased fluxes of planktonic foraminifera, principally of Globigerina bulloides and Globigerinita glutinata. These species mark an increase in productivity linked to SACW upwelling, supported by the enhancement of northeasterly winds and southward displacement of the ITCZ and SAH.     

Inorganic and organic nitrogen uptake by the toxigenic diatom Pseudo-nitzschia australis (Bacillariophyceae)

The nitrogen uptake capabilities of the toxigenic diatom Pseudo-nitzschia australis (Frenguelli), freshly isolated from Monterey Bay California, were examined in unialgal laboratory cultures at saturating photosynthetic photon flux densities (100 μmol photons m⁻² s⁻¹) and 15 °C. The kinetics of nitrogen (nitrate, ammonium, urea and glutamine) uptake as a function of substrate concentration were estimated from short (20.5 min) incubations using the ¹⁵N-tracer technique. Based on the estimated maximum specific uptake rates and measures of N affinity (the initial slope of the uptake versus nutrient concentration curve), nitrate is the preferred nitrogen substrate, followed by glutamine and ammonium, which are equivalent. Rates of urea uptake by P. australis did not saturate at concentrations as high as 36 μg-at N L⁻¹, and urea uptake as a function of concentration could not be described by Michaelis–Menten kinetics over the concentration gradient tested. Although there is a clear preference for nitrate at equivalent concentrations (compared to ammonium, urea, and glutamine), these laboratory results demonstrate the capability of this pennate diatom to utilize both inorganic and organic forms of nitrogen, supporting field observations that P. australis blooms during both upwelling and non-upwelling conditions off the west coast of North America. Substantial differences in the nitrogenous nutrition of P. australis can be expected in these environments, and anthropogenic inputs of N substrates such as ammonium and urea can support its growth, and may contribute significantly to both harmful diatom blooms and the maintenance of seed populations at non-bloom abundances, particularly during periods of reduced or absent upwelling.     

Community congruence of plants,invertebrates and birds in natural and constructed shallow open-water wetlands: Do we need to monitor multiple assemblages?

Biomonitoring is a common means of evaluating wetlands. It is based on the premise that the community composition of one taxonomic group is indicative of overall biology and the underlying environmental conditions at a wetland. To be a good bioindicator, there must be adequate concordance between the indicator group and other biotic assemblages. Otherwise, multi-assemblage monitoring is necessary to glean a complete picture of wetland condition. In 32 sites ranging from reference wetlands to stormwater retention ponds, we evaluated concordance in community composition among the six most commonly monitored wetland assemblages: waterfowl, wetland dependent songbirds, aquatic macroinvertebrates, and plants in the wet meadow, emergent, and open-water vegetation zones. We also assessed agreement in environmental correlates among these six assemblages and investigated the impact of human disturbance on cross-assemblage concordance. We found that cross-assemblage concordance was positive (p < 0.03 in 14 of 15 pair-wise comparisons, p = 0.06 in 15th case), but relatively low (Mantel R values 0.11–0.37), suggesting that the assemblages are mediocre surrogates for one another. Yet, we found very strong agreement among environmental correlates of the six assemblages, especially along the first axis of assemblage-specific ordinations (mean Spearman rho = 0.923), indicating that despite low concordance, the six assemblages are likely responding to the same environmental gradients. Thus, while a single assemblage may not serve as a surrogate for the other assemblages, it should yield an adequate estimate of underlying environmental conditions and the degree of disturbance. Most important among the environmental correlates were sediment and water nutrient levels, shoreline slope, and the size of wet meadow and emergent vegetation zones. Perhaps most interestingly, we found that the strength of cross-assemblage concordance was greatest in reference wetlands and was lower (p ≤ 0.05) in constructed wetlands. This implies that cross-assemblage concordance present in undisturbed sites may not persist in disturbed wetlands where several of these cross-assemblage relationships deteriorate. Furthermore, a general change in cross-assemblage concordance may itself be indicative of human disturbance in wetlands.     

A multi-proxy reconstruction and comparison of Holocene palaeoenvironmental changes in the Alvor and Alcantarilha estuaries (southern Portugal)

The present study investigates the history of two estuaries on the Algarve coast, southern Portugal, through a multi-proxy approach that links sedimentology, geochemistry, palynology, microfaunal analyses and radiocarbon dating. These analyses provide an overview of the development of these estuaries over the last ～7500 years. Palynological data reveal climate-driven vegetational shifts over the whole period. Microfauna, which is composed predominantly of foraminifers and ostracods, provides evidence for periods of marine and brackish water conditions, observed in both estuaries. Whereas the sediment record from the Alvor estuary shows a clear, nearly continuous silting-up sequence, the development of the Alcantarilha estuary is characterised by fluvial sedimentation, replaced by a marine environment at about 7300 yr cal BP. Marine transgression is indicated by marine-brackish foraminifera and ostracod assemblages, while upper-marsh pollen decreased and wetland communities increased at the same time. A continuous shallowing of the estuaries followed between ～6700 yr cal BP and ～5700 yr cal BP in Alvor and 4500 yr cal BP in Alcantarilha. This was interrupted by a distinct high-energy event, possibly a storm or tsunami, between 6400 and 5800 yr cal BP in Alvor; the event was not recorded in the Alcantarilha estuary. Afterwards, the silting-up restarted with clear similarities to the pre-event situation and continued until ～3500/2000 yr cal BP. This process was influenced by the build-up of sand barriers in front of the estuaries. This is also documented by a higher percentage of upper-marsh vegetation. The core from Alcantarilha estuary shows another layer of high-energy deposits, with mainly marine foraminifers and ostracods after 4500 yr cal BP. The youngest parts of the two records are characterised by decreasing tidal influence and increasing anthropogenic impact, indicated by increasing values of cultivated plants and other human-induced changes of vegetation cover.     

Long-term decline of brown algal assemblages from southern Brazil under the influence of a nuclear power plant

We investigated long-term trends in brown macroalgal assemblages inhabiting shallow subtidal rocky bottoms under the influence of thermal effluent discharge from the Brazilian nuclear power plant (BNPP). Three operational periods based on the units of the BNPP were analysed: T0 = pre-operational, between the years 1980 and 1983; T1 = operational period of unit 1, between 1988 and 1999; and T2 = operational period of units 1 and 2, between 2005 and 2012. Using generalized linear mixed models (GLMMs), we found significant declines in the numbers of genera and species over time. More than half of the species of brown macroalgae disappeared during T2. In addition, the numbers of macroalgal genera and species were inversely related to the local surface seawater temperatures. Multivariate analyses revealed a clear separation between the years of T2 and those of T0, indicating long-term changes in the community assemblages. Among the most common species in the area, the frequencies of Canistrocarpus cervicornis, Dictyopteris delicatula, Hincksia mitchelliae, Sargassum spp. and Sphacelaria tribuloides decreased during T2, while Padina gymnospora maintained rather high yearly frequencies during T2 (>40%). Our data suggest that seawater temperatures consistently higher than 30 °C together with peaks higher than 35 °C may have triggered the decline in the brown algae on rocky bottoms under the influence of the BNPP discharge. These results from southern Brazil are consistent with studies from other locations that ascribe changes in seaweed diversity to increasing seawater temperatures, highlighting the sensitivity of brown macroalgae to thermal stress and demonstrating their effectiveness as an ecological indicator for monitoring the effects of nuclear power plant effluents on coastal environments.     

Calibration-in-time versus calibration-in-space (transfer function) to quantitatively infer July air temperature using biological indicators (chironomids) preserved in lake sediments

Calibration-in-space (i.e. modern taxonomic assemblages of biota from many lakes located along a wide temperature gradient calibrated against meteorological data) is generally used to derive species-specific optima and tolerances. This results in transfer functions which then are applied to subfossil assemblages to quantitatively reconstruct environmental variables such as air/water temperature. Developing such transfer functions is time- and money-consuming, thus many biota-inferred temperature records are either based on transfer functions from other regions which might not take into account local characteristics or are only used qualitatively. In varved Lake Silvaplana (Engadine, Switzerland), another way of obtaining quantitative climate reconstructions from taxonomical assemblages preserved in lake sediments was assessed for the past 1000 years. A calibration-in-time (i.e. taxonomic-assemblage-of-biota time series calibrated against meteorological data covering the same time period) was developed for chironomids (non-biting midges) using a weighted-average-partial-least-square (WAPLS) model and compared with a calibration-in-space model. The calibration-in-time had a weaker correlation coefficient (r² = 0.71) than the calibration-in-space (r² = 0.86), but the error of prediction (RMSEP = 0.58 °C) and the maximum bias (Max Bias = 0.73 °C) outperformed the statistics of the calibration-in-space (RMSEP = 1.5 °C; Max Bias = 1.72). This result is probably due to the smaller temperature gradient of the calibration-in-time (6.5 °C) than the calibration-in-space (11.5 °C). For the last 150 years, the Pearson correlation coefficient was significant between the two reconstructions (r_Pearson = 0.52; p < 0.01) suggesting that both models recorded a similar pattern of temperature changes. On the millennium time-scale, both models showed a warm “Medieval Climate Anomaly”, a cold “Little Ice Age” and a warming through the present with significant correlations (rPearson corrected for autocorrelation (corr) = 0.61, p < 0.01) until ca. 1780 AD and between ca. 1937 and 2000 AD (r_{Pearson corr} = 0.90, p < 0.01). The reconstructions using both models significantly diverged between ca. 1780 and 1937 AD (r_{Pearson corr} = ?0.47, p < 0.01). The results of both reconstruction methods were compared with four independent local and regional records of early instrumental and documentary data during the period of divergence. Both reconstructions showed similarities with the early instrumental/documentary records, thus it was inconclusive which of the reconstruction models provides the better estimates. However, these results suggest that a calibration-in-time can be used to reconstruct climate over the last 1000 years when no calibration-in-space is available.     

Palynofacies analysis of the late Holocene San Nicolás terrace of the Cauca paleolake and paleohydrology of northern South America

The detailed palynofacies analysis of the late Holocene laminated succession of the San Nicolás terrace in the middle Cauca Valley, northern Colombia, is interpreted as the product of sedimentation in a lacustrine to fluvial dominated setting. Radiocarbon analyses reveal that the succession was deposited between ~ 3500 and a few hundreds of years with sedimentary rates in excess of ~ 600 cm/ka. The milimetric laminae and the high frequency fluctuations in the content of the palynodebris of terrestrial origin, i.e., the high altered ligno-cellulosic debris/amorphous organic matter ratio, together with diatoms typical of fluvial conditions, such as Aulacoseira granulata do suggest an intermittent and continuous hydrological and biological connectivity with the Cauca River, akin to a varzea lacustrine environment. Drier to wetter conditions appear to occur, moving upward in the succession. This might reflect regional precipitation conditions all along the Cauca Valley and the southern migration of the intertropical convergence zone.