副溶血弧菌VP2918基因缺失株的构建及功能研究

[目的] 以副溶血弧菌VP2918为研究对象,研究其对副溶血弧菌的生物学特性和致病性的影响。[方法] 利用同源重组技术构建了vp2918基因的基因缺失株（Δvp2918）和互补株（CΔvp2918）,并对野生株、缺失株和互补株的细菌生长曲线、运动性、生物被膜形成能力、对HeLa细胞的黏附能力、细胞毒性、对小鼠的致死率和组织载菌量进行分析。[结果] 缺失vp2918基因不影响副溶血弧菌的生长特性、运动性、生物被膜形成能力以及对HeLa细胞的黏附能力。但与野生株相比,Δvp2918对HeLa细胞的毒性作用显著降低;感染Δvp2918的小鼠症状明显减轻,存活率更高;Δvp2918在小鼠脾脏和肝脏中的载菌量显著低于野生株,互补株毒力基本恢复至野生株水平。[结论] vp2918不参与副溶血弧菌的运动性和生物被膜形成能力等过程,但与该菌的致病性相关,为潜在的毒力因子。     

外膜蛋白OmpR对副溶血弧菌致病特性的影响

[目的]探究OmpR在副溶血弧菌生物学特性和致病性中发挥的作用。[方法]利用同源重组技术构建了副溶血弧菌ompR基因缺失株(ΔompR)和互补株(CΔompR),分析各菌株的生长特性、运动性和生物被膜形成能力的差异;比较各菌株对细胞黏附、细胞毒性和小鼠致病性的影响。[结果]ompR基因缺失对副溶血弧菌的生长特性、运动性以及细胞毒性无显著影响。但与野生株相比,ΔompR的生物被膜的形成能力显著降低;感染ΔompR的小鼠存活率升高了25%,病变程度更低;ΔompR在小鼠心脏、肝脏和肾脏中的载菌量显著低于野生株,互补株毒力基本恢复至野生株水平。[结论]OmpR参与副溶血弧菌生物被膜形成和致病过程,是副溶血弧菌潜在的毒力因子。     

单核细胞增多性李斯特菌谷胱甘肽合成酶调控鞭毛形成研究

[目的] 本试验旨在构建单核细胞增多性李斯特菌谷胱甘肽合成酶基因gshF缺失株和互补株并研究其在细菌运动和鞭毛形成中的调控作用。[方法] 采用同源重组的方法构建得到gshF缺失株后,测定野生株及缺失株的运动性和体外生长能力;同时利用荧光定量PCR方法检测gshF缺失株中鞭毛相关基因转录水平的变化。[结果] 缺失gshF后细菌在体外培养基中的生长能力未受影响,但缺失株的运动性及鞭毛形成能力显著降低。此外,缺失株中鞭毛形成重要调控基因gmaR以及鞭毛结构元件基因flaA的转录水平显著低于野生株,而其他鞭毛相关基因的转录水平变化不明显。[结论] 研究首次表明单增李斯特菌谷胱甘肽合成酶通过调控鞭毛重要基因的转录进而影响细菌的运动性和鞭毛形成,研究有助于深入理解重要食源性胞内菌通过精确调控鞭毛形成以适应外界和宿主环境的分子机制。     

溶藻弧菌VcrV基因缺失株的构建及生物学特性

为研究溶藻弧菌Ⅲ型分泌系统VcrV基因的功能和生物学特性,采用同源重组技术成功构建了溶藻弧菌缺失株ΔVcrV,并用PCR检测其遗传稳定性。结果显示,缺失株遗传稳定;与野生株相比,生长和自凝集能力无显著变化;但生物膜形成能力降低,半致死剂量升高16.5倍;游动性和涌动性极显著升高,细胞粘附能力极显著降低(P<0.01),对H₂O₂和NaCl的耐受性降低;对头孢呋辛、麦迪霉素、克林霉素抗生素敏感度上升,对丁胺卡那、多粘菌素B抗生素敏感度降低;活性氧含量极显著降低(P<0.01),脯氨酸、肽聚糖、β-内酰胺酶、过氧化氢酶、超氧化物歧化酶、谷胱甘肽过氧化物酶指标均极显著升高(P<0.01)。缺失株生物学特性表明,VcrV基因参与溶藻弧菌Ⅲ型分泌系统性的致病性和多种生物学功能。     

拟态弧菌金属蛋白酶基因PrtV缺失株的构建及生物学特性分析

【背景】研究发现PrtV基因编码含多囊肾病(polycystic kidney disease)结构域的金属蛋白酶,其在多种细菌的致病过程中具有重要作用。拟态弧菌是一种感染多种水生动物的重要病原菌,PrtV基因在拟态弧菌致病中的作用尚不清楚。【目的】探究PrtV基因对拟态弧菌致病相关生物学特性的影响。【方法】采用自然转化的方法构建拟态弧菌PrtV基因缺失株(ΔPrtV),同时通过基因与质粒重组后电转化导入缺失株构建回补株(ΔPrtV/pPrtV),对突变株的生长特性、生化特征、生物被膜形成、自聚集能力、胞外产物卵磷脂酶和蛋白酶活性,以及致病性和细胞毒性等进行分析。【结果】与野生株相比,缺失株的生长特性、生物被膜形成、自聚集能力和卵磷脂酶活性无变化,但分解尿素、甘氨酸、香豆酸盐、鸟氨酸和赖氨酸的理化特性改变;胞外产物蛋白酶活性显著降低(P<0.05),细胞毒性显著下降(P<0.05),对杂交鲇的致病力下降10倍。【结论】PrtV基因与拟态弧菌的细胞毒性及致病性等多种生物学特性有关。该结果为进一步解析拟态弧菌PrtV基因功能及其致病机制提供了依据。     

核桃细菌性黑斑病菌rpfG基因的功能分析

[目的] 本研究旨在揭示核桃细菌性黑斑病菌（Xanthomonas arboricola pv.juglandis,Xaj） DW3F3中rpfG基因的生物学功能,从而为核桃细菌性黑斑病防治药剂的开发提供作用靶点。[方法] 以野油菜黄单胞菌（Xanthomonas campestris pv.campestris,Xcc）8004菌株以及水稻白叶枯病菌（Xanthomonas oryzae pv.oryzae,Xoo） PXO99^A的rpfG基因为模板序列,对Xaj野生型菌株DW3F3的基因组序列进行检索。利用同源重组技术,对Xaj中rpfG基因进行敲除,并用生物化学方法对基因缺失菌株的相关毒力因子、抗逆性进行检测。[结果] 通过同源比对,在XajDW3F3的基因组中发现了与XccrpfG、XoorpfG同源的基因,并成功获得rpfG的缺失突变株ΔrpfG。与野生型相比,突变株ΔrpfG的生物被膜形成能力仅为野生型XajDW3F3的44.58%;胞外多糖产量也由野生型的8.47 mg/mL降为5.23 mg/mL;ΔrpfG的絮凝活性增加,能使菌液变澄清;运动性实验显示ΔrpfG的运动直径比野生型增加了12.38%;胞外酶的分泌也发生了不同程度的改变,突变株分泌纤维素酶的能力极显著降低,淀粉酶活性有所提高,而分泌蛋白酶的能力未发生变化;此外rpfG缺失后,Xaj对逆境（盐、酸、SDS、硫酸铜）的耐受力降低。[结论] 结果表明rpfG基因能影响核桃细菌性黑斑病菌的致病相关性状,并赋予了细菌一定的抗逆性。     

低温下阻遏蛋白MogR对单增李斯特菌鞭毛形成的影响

【目的】单核细胞增生李斯特菌(简称单增李斯特菌) (Listeria monocytogenes, Lm)是食源性病原菌,可以引发李斯特菌病(listeriosis)。Lm能在低温下生长,对冷藏食品的安全构成严重威胁,并对人类健康造成潜在的危害。Lm能低温生长与抑制鞭毛基因表达以减少鞭毛的合成有关。MogR是Lm鞭毛基因转录的阻遏蛋白,在机体里或37 ℃环境下具有阻遏作用,Lm不产生鞭毛;然而,当Lm处于20-0 ℃时MogR无阻遏作用,Lm产生鞭毛。我们研究发现在4 ℃生长条件下Lm鞭毛合成减少,但具体的分子机制尚未明确。本文探究在4 ℃下Lm鞭毛合成少与MogR起阻遏作用的关系。【方法】以Lm ATCC 19115为亲本株,分别构建了MogR和鞭毛丝蛋白FlaA的缺失株ΔmogR和ΔflaA (作为无鞭毛对照株)及其回补株cΔmogR和cΔflaA,测定了菌株在4、28、37 ℃时的运动性、鞭毛产生情况和鞭毛基因表达量,并对所构建的菌株进行了4、28、37 ℃时生长曲线的测定。【结果】在4 ℃时,mogR缺失后,菌株运动性显著强于亲本株(P<0.01),鞭毛合成量显著多于亲本株(P<0.001),鞭毛基因转录水平显著高于亲本株(P<0.001);缺失株ΔmogR的生长能力显著弱于亲本株(P<0.05)。回补株cΔmogR的运动能力、鞭毛合成量和鞭毛基因转录水平与亲本株相比,无显著性差异。【结论】在4 ℃时,Lm鞭毛产量少与MogR对鞭毛基因起转录抑制作用有关,低温条件下Lm能生长繁殖与MogR对鞭毛基因表达的抑制作用有关。本研究结果为揭示Lm低温生长机制提供了新的信息。     

肽酶PepT参与副溶血弧菌的浮游运动和生物被膜形成

pepT基因编码一种金属依赖性肽酶T (peptidase T,PepT),能特异性催化三肽N端氨基酸,因此也称为氨肽酶T。研究发现大多数氨肽酶参与细菌蛋白质新陈代谢和调节三肽活性,但关于PepT在细菌毒力及致病性方面的报道较少。[目的]本文选取PepT为研究对象,研究其对副溶血弧菌生物学特性及致病性的影响。[方法]通过构建缺失株ΔpepT和回补株CΔpepT,比较菌株在运动性、生物被膜、环境耐受、细胞毒性等方面的差异。[结果]与野生株相比,ΔpepT缺失株的极性鞭毛转录水平极显著下降,浮游运动能力降低;同时生物被膜形成能力减弱,而细菌群集运动及环境耐受能力无显著差异。此外,缺失pepT基因会导致副溶血弧菌的细胞毒性和小鼠毒力作用显著下降。[结论]pepT基因与副溶血弧菌浮游运动和生物被膜形成能力相关,并且影响其致病性。     

内毒素休克大鼠肝线粒体质子跨膜转运的改变

用稳态荧光探针标记技术动态观察内毒素休克大鼠肝亚线粒体质子跨膜转运的变化.发现,休克5 h ATP、NADH和琥珀酸钠所致的9-氨基-6-氯-2-甲氧基吖啶(ACMA）最大荧光淬灭值（ΔA_max）显著低于对照组(P＜0.05)、最大荧光淬灭时间（T_ΔAmax）、半数荧光淬灭时间（T_1/2ΔAmax）非常显著延长(P＜0.01),肝线粒体质子跨膜转运能力下降;膜脂分子烃链和膜脂深层次流动性下降;线粒体膜PLA₂活性增加;血浆脂质过氧化产物MDA和线粒体MDA含量均显著增加.可能膜脂质过氧化和磷脂酶A₂的水解是引起内毒素休克肝线粒体质子转运功能改变的重要因素.     

mapZ基因缺失对变异链球菌生长分裂及氯己定作用下生物膜形成能力的影响

探究变异链球菌（Streptococcus mutans）分裂调控基因mapZ缺失对变异链球菌生长分裂、氯己定（Chlorhexidine, CHX）作用下生物膜形成能力的影响。针对前期课题组成功构建的变异链球菌的mapZ基因缺失突变株（ΔsmmapZ）,通过扫描电镜（SEM）观察细菌细胞生长形态及分裂隔膜的位置变化;通过实时定量PCR技术检测mapZ基因缺失对分裂基因ftsZ相对表达含量的影响;通过检测氯己定最小抑菌浓度（MIC）并在不同药物浓度下培养生物膜来探究mapZ基因缺失对变异链球菌生物膜形成能力的影响。结果表明：与野生株相比,ΔsmmapZ突变株形态发生改变（变为短圆球状）,分裂隔膜位置错乱;ΔsmmapZ突变株分裂基因ftsZ相对表达含量较UA159下降四分之一,具有统计学差异;ΔsmmapZ突变株MIC值为0.125 00 μg/mL,UA159野生株MIC值为0.250 00 μg/mL,且在药物浓度为0.125 00 μg/mL的氯已定作用下,野生株可以形成生物膜,而ΔsmmapZ则无生物膜形成。变异链球菌缺失mapZ基因影响细菌细胞的胞质分裂,降低分裂基因ftsZ的表达和氯己定下变异链球菌生物膜的形成能力。mapZ可作为潜在的抗菌药物研发靶点。     

The phylogenetic placement of Ostropales within Lecanoromycetes (Ascomycota) revisited

Results of molecular studies regarding the phylogenetic placement of the order Ostropales and related taxa within Lecanoromycetes were thus far inconclusive. Some analyses placed the order as sister to the rest of Lecanoromycetes, while others inferred a position nested within Lecanoromycetes. We assembled a data set of 101 species including sequences from nuLSU rDNA, mtSSU rDNA, and the nuclear protein-coding RPB1 for each species to examine the cause of incongruencies in previously published phylogenies. MP, minimum evolution, and Bayesian analyses were performed using the combined three-region data set and the single-gene data sets. The position of Ostropales nested in Lecanoromycetes is confirmed in all single-gene and concatenated analyses, and a placement as sister to the rest of Lecanoromycetes is significantly rejected using two independent methods of alternative topology testing. Acarosporales and related taxa (Acarosporaceae group) are basal in Lecanoromycetes. However, if the these basal taxa are excluded from the analyses, Ostropales appear to be sister to the rest of Lecanoromycetes, suggesting different ingroup rooting as the cause for deviating topologies in previously published phylogenies.     

Genome Analysis inNeurospora crassa;Cloning of Four Lociarginine-1(arg-1),methionine-6(met-6),unknown-7(un-7), andribosome production-1(rip-1) and Associated Chromosome Walking

We have cloned fourNeurospora crassagenes by complementation analysis. Cloned genes include thearginine-1(arg-1),methionine-6(met-6),unknown-7(un-7), andribosome production-1(rip-1) loci. Chromosome walks were initiated in ordered cosmid libraries from the cloned loci. A total of about 700 kb of theNeurosporagenome is covered in these walks.     

The phylogenetic placement of the Leucogastrales, including Mycolevis siccigleba (Cribbeaceae), in the Albatrellaceae using morphological and molecular data

The morphology of many hypogeous fungi converges on a homogeneous reduced form, suggesting that disparate lineages are subject to a uniform selection pressure. The primary goal of this study was to evaluate the morphology and infer the phylogeny of the Leucogastrales with Mycolevis siccigleba using a Bayesian methodology. A comprehensive morphological assessment was used for an a priori phylogenetic inference to guide the sequencing effort. All structures except spore ornamentation pointed to the Albatrellaceae as the most likely sister taxon. Polyporoletus sublividus, a close relative of Albatrellus, produces ornamented basidiospores with a similar structure to M. siccigleba basidiospores. The ITS from 30 taxa was used for the molecular phylogenetic analysis. P. sublividus was found sister to Mycolevis. Leucophleps spinispora and L. magnata formed a group sister to the Polyporoletus/Mycolevis group, whereas Leucogaster was polyphyletic with respect to the core of the Leucogastrales and sister to A. caeruleoporus. This relationship was expected as previously undescribed chlamydospores produced by members of Albatrellus had a similar morphology to the basidiospores of L. rubescens.     

下延叉蕨和芽胞叉蕨配子体发育的研究

利用光学显微镜详细观察了叉蕨属(Tectaria)下延叉蕨(Tectaria decurrens)和芽胞叉蕨(T.fauriei)的配子体发育过程,记录了配子体各发育阶段的特征。结果表明:(1)下延叉蕨和芽胞叉蕨的孢子均为单裂缝,具周壁,由周壁形成纹饰,孢子极面观椭圆形,赤道面观豆形或肾形。(2)孢子萌发方式为向心型。(3)原叶体发育方式为三叉蕨型。(4)成熟原叶体心脏形,两翼向斜上方扩展。(5)均具单细胞和多细胞毛状体,在丝状体或片状体阶段出现。研究认为,从配子体发育角度看,叉蕨属是较进化的陆生真蕨类;毛状体的类型、位置和出现时间等特征在叉蕨属种间存在差异,可作为该属种间分类的特征。     

Evolutionary relationships among aquatic anamorphs and teleomorphs: Lemonniera, Margaritispora, and Goniopila

The hypothesis that similar conidial morphologies in aquatic hyphomycetes are a result of convergent evolution was tested using molecular sequence data. Cladistic analyses were performed on partial sequences of 28S rDNA of seven species of Lemonniera, one species of Margaritispora and one species of Goniopila. Lemonniera has tetraradiate conidia with long arms, whereas Margaritispora and Goniopila have typically globose (isodiametric) conidia, with short conical protuberances in a stellate or quadrangular arrangement. Lemonniera and Margaritispora have phialidic conidiogenesis and both produce dark, minute sclerotia in culture whereas Goniopila has holoblastic conidiogenesis and does not produce sclerotia in culture. Goniopila produces a microconidial phialidic synanamorph in culture. All three genera have schizolytic conidial secession. Molecular analyses demonstrate that Lemonniera species are placed in two distinct clades: one within Leotiomycetes; the other within Pleosporales, Dothideomycetes. Margaritispora is placed with Lemonniera species within Leotiomycetes. Goniopila and Lemonniera pseudofloscula are placed within Dothideomycetes. No morphological character was entirely congruent with the molecular derived phylogeny. This suggests that for the group of species studied, conidial shape is not a reliable indicator of phylogeny but more likely the result of convergent evolution in response to the aquatic environment.     

甘菊ClHSP70与ClHSP90基因的克隆及表达分析

该研究以甘菊(Chrysanthemum lavandulifolium)为实验材料,通过RT-PCR方法从甘菊转录组数据中分离出热激蛋白合成相关基因,命名为ClHSP70和ClHSP90。序列分析表明,ClHSP70基因ORF全长为2 559bp,编码852个氨基酸,蛋白功能区预测表明含有典型的HSP70蛋白NBD和SBD保守结构域;ClHSP90基因ORF全长为2 094bp,编码697个氨基酸,含有HATPase结构域和HSP90保守结构域。生物信息学分析表明,甘菊ClHSP70与大豆(Glycine max)和烟草(Nicotiana tomentosiformis)HSP70蛋白有较高的一致性,ClHSP90基因编码的氨基酸序列与紫茎泽兰(Ageratina adenophora)HSP90高度相似;实时荧光定量表达分析表明,在42℃处理不同时间,甘菊叶片中ClHSP70和ClHSP90基因表达均在0.5h时显著增加,1h达到最大值,2h后缓慢下降;不同组织表达分析表明,甘菊在42℃处理1h后,ClHSP70在成熟叶中的表达量显著高于嫩叶和根等其他组织;ClHSP90在成熟茎中的表达量最高。研究说明,ClHSP70和ClHSP90基因具有热激蛋白特征,参与了甘菊热胁迫应答过程,该研究结果为以后深入研究其基因功能奠定了基础。     

Molecular and morphological characterization of Leveillula (Ascomycota: Erysiphales) on monocotyledonous plants

Leveillula on monocotyledonous plants have been recorded as L. taurica by several authors, whereas the fungus on Allium has been described as an independent species, namely L. allii, by some authors. We sequenced ca 600 bp of the rDNA ITS region for two Leveillula specimens from Allium and Polianthes (both from monocotyledons) and compared them with several already published sequences from Leveillula isolates from dicotyledons. Pair-wise percentages of sequence divergences were calculated for all Leveillula isolates. The ITS sequence of the Polianthes isolate was identical to L. taurica on Helianthus and Vicia. The sequence of the Allium isolate was 99.5 % identical to L. taurica on Euphorbia, Haplophylum, Peganum, etc. These results suggest close relationships between monocot and dicot pathogenic Leveillula species. The identity between two monocot isolates was 98.4 %. Phylogenetic analysis revealed that the two monocot isolates do not group into a clade together. This result suggests that Leveillula acquired parasitism to monocots at least twice independently.     

New species of Phaeoramularia, Pseudocercospora and Stenella from Western Ghats of India

Four new species of the hyphomycete genera Phaeoramularia viz. Ph. caesalpinae, Pseudocercospora viz., Ps. tiliacearum, Stenella, viz. S. argyreiae and S. grewiae occurring on Caesalpinia bonducella Fleming (Caesalpiniaceae), Grewia sp. (Tiliaceae), Argyrea sp. Lour (Convolvulaceae) and Grewia sp. L. (Tiliaceae), respectively are described and illustrated here. All these fungi were collected from Western Ghats of India.     

Characterisation of cell wall polysaccharides, arabinogalactans-proteins (AGPs) and phenolics of Cola nitida, Cola acuminata and Garcinia kola seeds

Many Cola plant species are endemic to West and Central Africa. Cola acuminata and Cola nitida are used as masticatory when fresh, while the dried nuts are used for beverages and pharmaceutical purposes in Europe and North America. Garcinia kola seeds, that serve as a substitute for the true kola nuts, are used in African traditional medicine for the treatment of various diseases, including colic, headache and liver cirrhosis. Seeds extracts of G. kola are also known for their anti-inflammatory, antimicrobial and antiviral properties. To gain information on the chemical properties of the kolas, we have isolated and analyzed cell wall polysaccharides, arabinogalactan-proteins and phenolic substances from the seeds of the three kola species. The sugar composition of cell wall material of C. acuminata, C. nitida and G. kola revealed that Gal (up to 30%), Ara, GalA and Glc as the predominant monosaccharides, representing approximately 90% by mol of the total hydrolysable sugar present in this material. In Ammonium oxalate cell wall fraction, GalA was found to be the major sugar present in all kola species. In the alkali-soluble fraction, there were significant differences in the level of Glc and Gal. The level of Glc was high in C. acuminata and C. nitida while the level of Gal and Xyl were high in C. nitida and G. cola. Isolation and quantification of arabinogalactan-proteins demonstrate that G. kola seeds contained four to eight times more of these proteoglycans than the seeds of the other two species. Finally, analysis of soluble phenolic substances shows that caffeine and catechin were largely represented in C. acumina and C. nitida seeds, with caffeine accounting for 50% of all soluble phenolics. These findings indicate that the three Kola seeds are highly enriched in pectins and proteoglycans and that C. acuminata and C. nitida can be used as a possible source of caffeine and catechin.