Seasonal expression patterns of clock-associated genes in the blue mussel Mytilus edulis

Environmental cues allow organisms to synchronise their internal biological rhythms with external environmental cycles. These rhythms are regulated on a molecular level by oscillating interactions between clock genes and their proteins. Light is a particularly relevant environmental cue, provisioning daily information via light/dark cycles as well as seasonal information via day-length (photoperiod). Despite the ecological and commercial importance of bivalves, little is known about the interactions comprising their molecular clock mechanism. This study investigates the link between the annual seasonal progression and reproductive development in the blue mussel (Mytilus edulis), using mRNA expression patterns of clock-associated genes: Clock, Cry1¸ ARNT, Timeout-like, ROR/HR3 and aaNAT, in the gonads of both sexes, sampled over three daily time-points on a tidal beach during the winter and summer solstices. Significant differences in mRNA expression levels, including some seasonal differences at comparable time-points, were detected for all genes with the exception of Timeout-like. These differences occurred seasonally within sex (Clock, Cry1, ROR/HR3), seasonally between sexes (Clock, Cry1, ARNT, ROR/HR3, aaNAT) and daily between sexes (Cry1), although no significant daily differences were detected in summer or winter for either sex for any of the genes. This study reveals that clock-associated genes show seasonal responses in this species of bivalve. Understanding the mechanisms by which environmental cues drive biological rhythms is critical to understanding the seasonal sensitivity of this keystone species to environmental changes.     

Observations on egg production rates and seasonal changes in the internal morphology of Mediterranean populations of Acartia clausi and Centropages typicus

Egg production rates in wild populations of Acartia clausi and Centropages typicus, sampled biweekly in the Gulf of Naples from October 1985 to July 1987, showed marked seasonal fluctuations with maximum values in early spring that proceeded the annual maxima for adult female densities in summer. A positive correlation between chlorophyll a concentrations and egg production was evident only during the early spring phytoplankton bloom. A strong diminution in egg deposition occurred later in spring and continued throughout the summer notwithstanding high chlorophyll concentrations. In winter, when population abundances for adult females were lowest, egg production rates were always higher than in summer. Differences in egg production rates coincided with pronounced morphological changes between summer and winter populations of both species. The most striking of these changes consisted, in winter, in the presence of a dark brown fluid-like mass of granular material that seemed to freely bathe the gonads. The presence of this substance only during periods of elevated egg production suggests that it may enhance egg production rates when the adult population reaches minimum annual levels. Such a mechanism of self-regulation may operate to dampen the effects of environmental variability thereby contributing to maintain a conservative structure in coastal copepod communities.     

Interseasonal movements of greater sage-grouse,migratory behavior,and an assessment of the core regions concept in Wyoming

Animals can require different habitat types throughout their annual cycles. When considering habitat prioritization, we need to explicitly consider habitat requirements throughout the annual cycle, particularly for species of conservation concern. Understanding annual habitat requirements begins with quantifying how far individuals move across landscapes between key life stages to access required habitats. We quantified individual interseasonal movements for greater sage-grouse (Centrocercus urophasianus; hereafter sage-grouse) using radio-telemetry spanning the majority of the species distribution in Wyoming. Sage-grouse are currently a candidate for listing under the United States Endangered Species Act and Wyoming is predicted to remain a stronghold for the species. Sage-grouse use distinct seasonal habitats throughout their annual cycle for breeding, brood rearing, and wintering. Average movement distances in Wyoming from nest sites to summer-late brood-rearing locations were 8.1 km (SE = 0.3 km; n = 828 individuals) and the average subsequent distances moved from summer sites to winter locations were 17.3 km (SE = 0.5 km; n = 607 individuals). Average nest-to-winter movements were 14.4 km (SE = 0.6 km; n = 434 individuals). We documented remarkable variation in the extent of movement distances both within and among sites across Wyoming, with some individuals remaining year-round in the same vicinity and others moving over 50 km between life stages. Our results suggest defining any of our populations as migratory or non-migratory is innappropriate as individual strategies vary widely. We compared movement distances of birds marked using Global Positioning System (GPS) and very high frequency (VHF) radio marking techniques and found no evidence that the heavier GPS radios limited movement. Furthermore, we examined the capacity of the sage-grouse core regions concept to capture seasonal locations. As expected, we found the core regions approach, which was developed based on lek data, was generally better at capturing the nesting locations than summer or winter locations. However, across Wyoming the sage-grouse breeding core regions still contained a relatively high percentage of summer and winter locations and seem to be a reasonable surrogate for non-breeding habitat when no other information exists. We suggest that conservation efforts for greater sage-grouse implicitly incorporate seasonal habitat needs because of high variation in the amount of overlap among breeding core regions and non-breeding habitat. © 2012 The Wildlife Society.     

The effect of oilseed rape occurrence on main prey abundance and breeding success of the Common Buzzard Buteo buteo

Capsule The occurrence of oilseed rape increased main prey abundance and breeding success of Common Buzzards.

Aims We tested whether the occurrence of oilseed rape influences the abundance of Common Voles, i.e. the main prey of Common Buzzards and so also nesting activity and breeding success of Common Buzzards.

Methods The study was carried out in 2005–2012 in a 38?km² area in western Poland, where oilseed rape plantations (12–106?ha) covered 18% of the agricultural land. The number of active burrow entrances was used as an index of vole abundance in various crops, and Buzzard breeding performance, i.e. the occurrence of annual nesting attempts in individual long-term nesting sites as well as the presence and number of fledglings, was estimated by observations of their nests.

Results The index of vole abundance was highest in oilseed rape, and judging by the proportion of active burrow entrances (33–77%), the plantations of rape typically supported a larger portion of the local vole population than other crops. The acreage of oilseed rape fields around individual nesting sites of Buzzards did not affect the probability of nesting attempts in these sites. However, the probability of successful nesting and the number of fledglings per successful nest increased with the area of oilseed rape around the Buzzard nesting sites.

Conclusion The occurrence of oilseed rape may positively affect prey availability and in turn the breeding success of Buzzards. The spread of oilseed rape may therefore also be beneficial for other vole-eating raptors hunting in the agricultural landscapes.     

On the seasonal distribution of sunspot frequency

Abstract

Using the Zürich sunspot data, the seasonal distribution of all sunspot‐groups and of all new‐formed groups from 1938 to the last solar minimum in 1976 was investigated.

It is shown that there exist different distributions for the northern and southern solar hemisphere with maxima in the third and second quarter of the years, respectively, and seasonal differences in the north‐south asymmetry.

These results confirm the presumption of an influence of interstellar matter on solar activity.     

Disrupted seasonal biology impacts health,food security and ecosystems

The rhythm of life on earth is shaped by seasonal changes in the environment. Plants and animals show profound annual cycles in physiology, health, morphology, behaviour and demography in response to environmental cues. Seasonal biology impacts ecosystems and agriculture, with consequences for humans and biodiversity. Human populations show robust annual rhythms in health and well-being, and the birth month can have lasting effects that persist throughout life. This review emphasizes the need for a better understanding of seasonal biology against the backdrop of its rapidly progressing disruption through climate change, human lifestyles and other anthropogenic impact. Climate change is modifying annual rhythms to which numerous organisms have adapted, with potential consequences for industries relating to health, ecosystems and food security. Disconcertingly, human lifestyles under artificial conditions of eternal summer provide the most extreme example for disconnect from natural seasons, making humans vulnerable to increased morbidity and mortality. In this review, we introduce scenarios of seasonal disruption, highlight key aspects of seasonal biology and summarize from biomedical, anthropological, veterinary, agricultural and environmental perspectives the recent evidence for seasonal desynchronization between environmental factors and internal rhythms. Because annual rhythms are pervasive across biological systems, they provide a common framework for trans-disciplinary research.     

Photoperiod affects the diurnal rhythm of hippocampal neuronal morphology of siberian hamsters

Individuals of many species can regulate their physiology, morphology, and behavior in response to annual changes of day length (photoperiod). In mammals, the photoperiodic signal is mediated by a change in the duration of melatonin, leading to alterations in gene expressions, neuronal circuits, and hormonal secretion. The hippocampus is one of the most plastic structures in the adult brain and hippocampal neuronal morphology displays photoperiod-induced differences. Because the hippocampus is important for emotional and cognitive behaviors, photoperiod-driven remodeling of hippocampal neurons is implicated in seasonal differences of affect, including seasonal affective disorder (SAD) in humans. Because neuronal architecture is also affected by the day-night cycle in several brain areas, we hypothesized that hippocampal neuronal morphology would display a diurnal rhythm and that day length would influence that rhythm. In the present study, we examined diurnal and seasonal differences in hippocampal neuronal morphology, as well as mRNA expression of the neurotrophic factors (i.e., brain-derived neurotrophic factor [Bdnf], tropomyosin receptor kinase B [trkB; a receptor for BDNF], and vascular endothelial growth factor [Vegf]) and a circadian clock gene, Bmal1, in the hippocampus of Siberian hamsters. Diurnal rhythms in total length of dendrites, the number of primary dendrites, dendritic complexity, and distance of the furthest intersection from the cell body were observed only in long-day animals; however, diurnal rhythms in the number of branch points and mean length of segments were observed only in short-day animals. Spine density of dendrites displayed diurnal rhythmicity with different peak times between the CA1 and DG subregions and between long and short days. These results indicate that photoperiod affects daily morphological changes of hippocampal neurons and the daily rhythm of spine density, suggesting the possibility that photoperiod-induced adjustments of hippocampal neuronal dynamics might underlie seasonal difference of affective responses. Bmal1 mRNA showed a diurnal rhythm and different expression levels between long and short days were observed. However, there were no strong effects of day length on Bdnf. trkb, and Vegf gene expression, suggesting that these genes are not involved in the photoperiodic effects on hippocampal neurons.     

Seasonal changes in general activity, body mass and reproduction of two small nocturnal primates: a comparison of the golden brown mouse lemur ( Microcebus ravelobensis) in Northwestern Madagascar and the brown mouse lemur ( Microcebus rufus) in Eastern Madagascar

To investigate for the first time the relationship between contrasting patterns of seasonal changes of the environment and activity, body mass and reproduction for small nocturnal primates in nature, we compared a population of golden brown mouse lemur (Microcebus ravelobensis) in a dry deciduous forest of northwestern Madagascar and of the brown mouse lemur (Microcebus rufus) in an evergreen rain forest of eastern Madagascar. Both species live under similar photoperiodic conditions. Golden brown mouse lemurs (GBML) were active during the whole period (May to December) irrespective of changing environmental conditions. In contrast, a part of the population of brown mouse lemurs (BML) showed prolonged seasonal torpor, related to body mass during periods of short day length and low ambient temperatures. Differences between species might be due to differences in ambient temperature and food supply. Body weight and tail thickness (adipose tissue reserve) did not show prominent differences between short and long photoperiods in GBML, whereas both differ significantly in BML, suggesting species-specific differences in the photoperiodically driven control of metabolism. Both species showed a seasonal reproduction. The rate of growth and size of the testes were similar and preceded estrous onset in both species suggesting a photoperiodic control of reproduction in males. The estrous onset in females occurred earlier in GBML than in BML. Estrous females were observed over at least 4 months in the former, but in only 1 month in the latter species. Intraspecific variation of estrous onset in GBML may be explained by body mass. Interspecific variation of female reproduction indicates species-specific differences in the control of reproduction. Thus, environmentally related differences in annual rhythms between closely related small nocturnal lemurs emerged that allow them to cope with contrasting patterns of seasonal changes in their habitats.     

Daily and Seasonal Rhythms in Immune Responses of Splenocytes in the Freshwater Snake,Natrix piscator

Present study was designed to examine daily and seasonal variability in the innate immune responses of splenocytes in the fresh water snake, Natrix piscator. Animals were mildly anesthetized and spleen was aseptically isolated and processed for macrophage phagocytosis, NBT reduction, nitrite production, splenocyte proliferation and serum lysozyme activity. Samples were collected at seven time points, viz., 0000, 0400, 0800, 1200, 1600, 2000 and 0000 h during three different seasons, namely summer, winter and spring. Cosinor analysis revealed that percent phagocytosis had a significant 24-h rhythm during summer and spring seasons. The peaks of rhythms in NBT reduction and nitrite release occurred in the morning hours at 10.88 h and 8.31 h, respectively, in winter. A significant 24-h rhythm was also observed in lysozyme concentration and splenocyte proliferation (both Basal and Concanavalin A stimulated) in all three seasons. A significant phase shift in splenocyte proliferation was obtained with a trend of delayed phase shift from winter to spring and from spring to summer. Of the nine variables, significant annual (seasonal) rhythms were detected in almost all variables, excluding phagocytic and splenosomatic indices. All rhythmic variables, except spleen cellularity, exhibited tightly synchronized peaks coinciding with the progressive and recrudescence phases of annual reproductive cycle. It is concluded that the snake synchronizes its daily and seasonal immune activity with the corresponding external time cues. The enhancement of immune function coinciding with one of its crucial reproductive phases might be helping it to cope with the seasonal stressors, including abundance of pathogens, which would otherwise jeopardize the successful reproduction and eventual survival of the species.     

The influence of seasonal changes in light on hormones in normal cats and in cats with lesions of the superior colliculi and pretectum

Abstract

Two groups of cats with lesions of the superior colliculi and adjacent pretectal nuclei and two groups of sham‐operated cats were subjected simultaneously to artificial “bright winter” and “dim summer” lighting conditions and their endocrine state determined. Urinary excretion of 11‐hydroxycorticoids, adrenalin, and norad‐renalin were specified with fluorometric techniques, and thyroid function was assessed with an uptake measure of radioiodide and with a rate of release measure of radioiodide‐labelled hormones from the thyroid gland. The results indicated that the cats in the bright winter condition had much higher indices of thyroid and glucocorticoid function. No effect of the lighting schedules on the catecholamines, urinary volume or body weight was detected, and no effect of the lesion was detected. A comparison of these data with our previous longitudinal studies in cats, as well as with the literature on other species, indicates that (1) light is the Zeitgeber for the annual glucocorticoid rhythm; (2) even though light influences the activity of the thyroid gland, it is difficult to consider it as the Zeitgeber because thyroid rhythms do not exhibit annual rhythms; (3) with regard to the role of light in entraining the catecholamines, the results were equivocal, possibly because of the sampling times. The raison d'etre of biological rhythms is considered, and it is suggested that their provision of order to the temporal milieu may be viewed as a higher order aspect of homeostasis.     

Seasonal Changes in the Quantity and Nitrogen Content of Coarse Detritus in a Southern Ontario Stream

Seasonal changes in standing crop of coarse, benthic detritus at five locations across a second-order stream were studied between May 1971 and May 1972. Standing crop near the banks varied seasonally with highest quantities in the autumn and winter, whereas near midstream seasonal changes in standing crop were negligible. Mean annual standing crop was 747 g/m² (ash-free dry weight) near the banks and 225 g/m² (AFDW) at midstream. Deposition experiments showed that standing crops of detritus came to equilibrium in 2–3 days at midstream and in about one week near the banks. Nitrogen content of coarse detritus, which ranged between 0.65 and 3.51% (AFDW), did not vary seasonally but was significantly greater near the banks than at midstream.     

Effects of the winter beechmast crop on bird occurrence in British gardens

Capsule Woodland birds were significantly less likely to occur in gardens in years of high beechmast crop.

Aim To test the hypothesis that woodland species that feed on beechmast will have significantly lower occurrence rates at garden feeders in mast years.

Methods Weekly winter occurrence rates at garden feeders between 1970/71 and 1999/2000 for 40 species were analysed in relation to annual beechmast abundance, classified into low, medium and high years. A repeated-measures logistic regression model was used to assess whether beechmast abundance explained further significant variation additional to underlying seasonal and annual trends.

Results Seven species that commonly feed on beechmast showed significantly lower occurrence in gardens in years of highest beechmast abundance: Great Spotted Woodpecker Dendrocopos major, Woodpigeon Columba palumbus, Great Tit Parus major, Coal Tit Periparus ater, Nuthatch Sitta europaea, Jay Garrulus glandarius and Chaffinch Fringilla coelebs. Blackbird Turdus merula and Siskin Carduelis spinus, which showed similar significant patterns, are likely to take beechmast as elements of their diet. Pied Wagtail Motacilla alba was the only insectivorous species to show significant effects, but occurrence was lowest in years of intermediate beechmast abundance. For the latter species, this may have been due to confounding effects of temperature, but there were no such confounding effects of either temperature, or the number of bird feeders provided in gardens, for the other nine species.

Conclusion Use of artificial food sources by birds in gardens is influenced by resources in the surrounding countryside, suggesting that food provided in gardens may play a significant part in the population dynamics of these species, that population monitoring without consideration of the garden habitat may be deficient, and that volunteer-based garden bird recording may provide data that can be used as an indicator of changes in the wider countryside.     

Seasonal variations of diatoms and dinoflagellates in a shallow,temperate estuary,with emphasis on neritic assemblages

Seasonal changes in the diatom and dinoflagellate assemblages were examined in the neritic zone of the Urdaibai estuary (north Spain) with regard to some major physical and chemical variables during an annual cycle. A total of 81 diatoms and 38 dinoflagellates were identified and quantified during the study period. Both groups displayed a distinctive pattern of seasonal succession. The seasonal distribution of the Shannon index showed a trend of increasing values from the upper estuary to the lower neritic segment. The diatom diversity maxima were observed in February, April and September, and dinoflagellate maxima in April–May, July and October. Diatoms dominated the assemblages, reaching 1×10⁶ cells l^–1 from April to September. A shift from large diatoms and dinoflagellates to small bloom-forming taxa was observed during winter–early spring. A spring diatom bloom composed of Rhizosolenia spp. was observed in April, while small chain-forming taxa (chiefly Chaetoceros spp.) dominated from June to September. Cell maxima for both groups in late summer were produced by the diatoms Chaetoceros salsugineum and Skeletonema costatum, and by the dinoflagellates Heterocapsa pygmaea and Peridinium quinquecorne. Silicate availability by river supply and strong tidal-mixing of the water column seem to determine the year-round dominance of diatoms over dinoflagellates.     

Photoperiodic diapause under the control of circadian clock genes in an insect

Background  

Most organisms have evolved a circadian clock in order to anticipate daily environmental changes and many of these organisms are also capable of sophisticated measurement of daylength (photoperiodism) that is used to regulate seasonal events such as diapause, migration and polymorphism. It has been generally accepted that the same elements are involved in both circadian (daily) and seasonal (annual) rhythms because both rely upon daily light-dark cycles. However, as reasonable as this sounds, there remains no conclusive evidence of such a molecular machinery in insects. We have approached this issue by using RNA interference (RNAi) in Riptortus pedestris.     

Seasonal effects on the freerunning rhythm of circadian activity of longnose dace (Rhinichthys cataractae)

Synopsis Freerunning circadian rhythms of locomotor activity in individual longnose dace sampled from a population at 41°N latitude were recorded under constant darkness throughout the year. There was an annual cycle in the length of the circadian period, with maximum and minimum lengths of mean period of 23.6 and 21.6 h recorded during summer (June) and winter (December), respectively. These annual changes in period length may have resulted from seasonal changes in entrainment by natural light-dark cycles and their after-effects on endogenous circadian rhythms. The possibility of an endogenous circannual rhythm was also considered.     

Modelling the effect of temperature variation on the seasonal dynamics of Ixodes ricinus tick populations

Seasonal variation in temperature is known to drive annual patterns of tick activity and can influence the dynamics of tick-borne diseases. An age-structured model of the dynamics of Ixodes ricinus populations was developed to explore how changes in average temperature and different levels of temperature variability affect seasonal patterns of tick activity and the transmission of tick-borne diseases. The model produced seasonal patterns of tick emergence that are consistent with those observed throughout Great Britain. Varying average temperature across a continuous spectrum produced a systematic pattern in the times of peak emergence of questing ticks which depends on cumulative temperature over the year. Examination of the effects of between-year stochastic temperature variation on this pattern indicated that peak emergence times are more strongly affected by temperature stochasticity at certain levels of average temperature. Finally the model was extended to give a simple representation of the dynamics of a tick-borne disease. A threshold level of annual cumulative temperature was identified at which disease persistence is sensitive to stochastic temperature variation. In conclusion, the effect of changing patterns of temperature variation on the dynamics of I. ricinus ticks and the diseases they transmit may depend on the cumulative temperature over the year and will therefore vary across different locations. The results also indicate that diapause mechanisms have an important influence on seasonal patterns of tick activity and require further study.     

Overcrowding as one of the causes of dispersal of young Tree Sparrows

Capsule Low and variable encounter rates of birds in fragmented arctic‐alpine habitats add difficulty to monitoring their breeding populations.

Aims To quantify seasonal variation in the encounter rates (apparent abundance) of breeding birds in arctic‐alpine habitats in Scotland.

Methods Birds were sampled from 15 repeated linear transects between April and August in 2005 and 2006. glmms (and for scarcer species glms) were used to investigate how the apparent abundance of different species varied between months and years.

Results Three arctic‐alpine specialists (Rock Ptarmigan, Eurasian Dotterel and Snow Bunting) were recorded. The 24 other species recorded included more widely distributed upland species, generalists that also used arctic‐alpine habitats and also some transient species from lower altitude. Overall encounter rates were low (only exceeding 1 bird km^?1 in any month for one species; Meadow Pipits) with marked variation between months. The pattern of seasonal variation in encounter rates varied markedly between species.

Conclusions Low encounter rates and marked variation in apparent abundance will render more difficult efforts to monitor birds in marginal and fragmented areas of arctic‐alpine habitats. Particularly relevant is the potential for changes in the timing of breeding and seasonal movements to influence encounter rates and be falsely interpreted as changes in actual abundance. Monitoring in arctic‐alpine habitats should include both specialist and non‐specialist birds of that habitat, as the latter may be more numerous and, therefore, provide supplementary evidence of temporal or seasonal change.     

A method to estimate phenological variation using data from large‐scale abundance monitoring programmes

Capsule Large‐scale abundance monitoring programmes can be used to estimate annual phenological shifts.

Aims Phenology refers to the timing of any annually repeated biological event. The method developed here aims at measuring phenological variation in an indirect way by modelling seasonal abundance variations. Thus, it provides the opportunity to use a large number of datasets which have rarely been used in phenological studies. Phenological variations computed using this standardized method are comparable between species.

Methods The data used for the development of this method originates from the French Breeding Bird Survey, a large‐scale abundance monitoring programme launched in 2001. For each species, the phenological shift between two seasonal abundance trends is computed using maximum likelihood.

Results Phenological shifts relative to the year 2005 (reference year) were estimated for 46 species over a 5‐year period (2001–6). The standard deviations of the shifts do not differ significantly between species with different migratory status. Moreover, at the species level, the computed phenological shifts relate to the shifts of the mean date weighted by abundance. However, mean date, cannot be used in studies incorporating species with different migratory status (e.g. trans‐Saharan migrant, sedentary) because of ambiguous changes for the same biological shift in timing.

Conclusions The method described here is of particular value in determining how the phenology of common bird species changes in relation to climate. It offers the opportunity to increase the spatial scale of phenological studies and to include multi‐species analyses. This method could be applied to any abundance or constant effort site programme to study the timing of any biological process for which a seasonal distribution is available.     

麦积山石窟赋存环境中空气细菌的时空分布特征

【目的】空气微生物沉降及污染与文化遗产的微生物退化密切相关,本文对世界文化遗产地麦积山石窟赋存环境空气中细菌浓度和群落结构的季节性变化特征进行了系统研究,为石窟环境监测预警和文物预防性保护提供依据。【方法】利用生物气溶胶采样器,在2016年春、夏、秋和冬季分别采集空气样品;基于传统培养方法获得空气中细菌浓度及纯培养菌株;通过提取基因组DNA、扩增细菌16S rRNA、测序和系统发生树等分子技术研究细菌群落时空动态变化规律;结合环境监测数据,分析影响遗产地空气细菌变化的主要因素。【结果】监测期内,空气细菌浓度在(281.20–1409.20)CFU/m3之间,最高浓度出现在MJ4处的夏季,最低浓度出现在MJO处的春季;具有明显季节性变化特征,在空间层位分布上有所差异,但不显著(P0.05)。培养的细菌菌株经鉴定属于4个门11个属;芽孢杆菌属(Bacillus)、Paenarthrobacter、节杆菌属(Arthrobacter)、薄层菌属(Hymenobacter)和考克氏菌属(Kocuria)等为优势属。【结论】麦积山石窟空气细菌群落结构具有明显的季节性和空间分布动态变化特征;在石窟不同层位,空气中细菌群落分布与相对湿度、温度与降雨量相关;部分细菌种属如芽孢杆菌属、微球菌属(Micrococcus),为壁画及彩塑生物腐蚀的潜在病害菌;麦积山石窟及周边环境空气细菌的监测可为石窟保护和旅游开放管理提供重要参考。