The position of the rotation center of the glenohumeral joint

To validate the assumption that the center of rotation in the glenohumeral (GH) joint can be described based on the geometry of the joint, two methods for calculation of the GH rotation center were compared. These are a kinematic estimation based on the calculation of instantaneous helical axes, and a geometric estimation based on a spherical fit through the surface of the glenoid. Four fresh cadaver arms were fixed at the scapula and fitted with electromagnetic sensors. Each arm was moved in different directions while at the same time the orientation of the humerus was recorded. Subsequently, each specimen was dissected and its glenoid and humeral head surfaces were digitized. Results indicate no differences between the methods. It is concluded that the method to estimate the GH center of rotation as the center of a sphere through the glenoid surface, with the radius of the humeral head, appears to be valid.     

Molecular mechanisms underlying the memory-enhancing effects of estradiol

This article is part of a Special Issue “Estradiol and cognition”.Since the publication of the 1998 special issue of Hormones and Behavior on estrogens and cognition, substantial progress has been made towards understanding the molecular mechanisms through which 17β-estradiol (E₂) regulates hippocampal plasticity and memory. Recent research has demonstrated that rapid effects of E₂ on hippocampal cell signaling, epigenetic processes, and local protein synthesis are necessary for E₂ to facilitate the consolidation of object recognition and spatial memories in ovariectomized female rodents. These effects appear to be mediated by non-classical actions of the intracellular estrogen receptors ERα and ERβ, and possibly by membrane-bound ERs such as the G-protein-coupled estrogen receptor (GPER). New findings also suggest a key role of hippocampally-synthesized E₂ in regulating hippocampal memory formation. The present review discusses these findings in detail and suggests avenues for future study.     

Visualizing neuromodulation in vivo: TANGO-mapping of dopamine signaling reveals appetite control of sugar sensing

Behavior cannot be predicted from a "connectome" because the brain contains a chemical "map" of neuromodulation superimposed upon its synaptic connectivity map. Neuromodulation changes how neural circuits process information in different states, such as hunger or arousal. Here we describe a genetically based method to map, in an unbiased and brain-wide manner, sites of neuromodulation under different conditions in the Drosophila brain. This method, and genetic perturbations, reveal that the well-known effect of hunger to enhance behavioral sensitivity to sugar is mediated, at least in part, by the release of dopamine onto primary gustatory sensory neurons, which enhances sugar-evoked calcium influx. These data reinforce the concept that sensory neurons constitute an important locus for state-dependent gain control of behavior and introduce a methodology that can be extended to other neuromodulators and model organisms.     

Spectroscopic Determinants in the Reaction Center of Rhodopseudomonas Viridis

Assignments are proposed for the long wavelength absorption bands observed in the reaction center of Rhodopseudomonas viridis. The assignments are based on a theoretical treatment in which quantum mechanical calculations are first carried out on the individual chromophores of the reaction center. The energies and wave functions that are obtained are then introduced into an exciton-type perturbation treatment in which extensive configuration interaction is carried out between the excited states of the four bacteriochlorophylls and two bacteriopheophytins of the reaction center. Calculated values for absorption maxima, transition moments, linear dichroism, and rotational strength are compared with experiments in an attempt to distinguish among different assignments. The calculations alone do not lead to unambiguous assignments; indeed it is difficult to account for the reaction center spectra without introducing assumptions as to the effects of the protein on the energy levels of the individual molecules. Even if these effects are treated as free parameters, the experimental spectra still provide useful constraints that restrict the models that are possible. The major result of this work is that the weak 850-nm absorption band is due, primarily, to the higher energy exciton state of the bacteriochlorophyll special pair. Accounting for the 960-nm absorption band of the low energy exciton state of the special pair requires either that a large spectroscopic effect of the protein be introduced, or possibly, that charge transfer states play a major spectroscopic role. The difference in spectra seen in the formation of oxidized or triplet state reaction centers can be understood in terms of a combination of electrochromic effects and modified exciton interactions.     

基因表达谱信息分析软件IDEA与WebGEA

基因芯片具有高通量快速并行检测基因表达水平的功能,是功能基因组研究的有力工具。针对基因芯片常规的信息分析需要,我们初步设计开发了基因表达谱的信息学分析平台,包括基于单机的软件IDKA(Information Digger for Experiments of microArray)与网络应用程序WebGEA(WEB GeneChip Expression Analysis),分别支持用户运行独立程序与在因特网上提交数据运行服务器程序来完成数据采掘分析任务。该平台得到良好的应用,是解决基因芯片常规的信息分析问题的一个方便工具。     

Nucleolar fibrillar centers in mouse spermatid nucleoli

The nucleoli of young spermatids of mice are described. They exhibit a very special shape resembling a "padlock" in which three different areas can be distinguished: (a) a compact zone corresponding to the fibrillar component, (b) the granular component and (c) a fibrillar center of low density. Fibrillar and granular components usually appear segregated. This nucleolus has been reconstructed based on serial sectioning. When the silver impregnation technique is employed, both fibrillar and granular components show a positive reaction, although the fibrillar center is free of granules. The morphology of the fibrillar center seems to be similar to that reported in other cells. The possibility that these fibrillar centers correspond to the nucleolar organizer is discussed.     

The effect of activation versus inhibition of feedback on perceived control of EEG activity

This study explores a model in which perceived control is affected by multiple sources of feedback at three different stages of the control sequence — person, response, and outcome. Behavior that enhances feedback is termedactivation, while behavior that diminishes feedback is termedinhibition. The study tests the hypothesis that activation at any stage of the sequence leads to greater perceived control than inhibition. Eighty subjects increased or decreased their brain-wave activity (EEG) by making a tone go either on or off, using either an active or a passive strategy. Following 10 60-second trials, subjects rated their perception of control over their EEG activity. The hypothesis that making a tone go on (activation of the outcome) leads to a greater perception of control than making the tone go off (inhibition of the outcome) was confirmed only when subjects decreased their EEG activity. Perceived control was not significantly correlated with actual control, supporting the expectation that they are separately mediated. The results did not support the hypothesis that increasing EEG activity or using an activity strategy would lead to a greater perception of control than decreasing EEG or using a passive strategy. These findings are interpreted as evidence that attention to feedback may be necessary for the predicted bias in perceived control to occur, and that activation and inhibition should be operationalized as the absolute presence versus absence of feedback in testing the hypothesis for the first two stages of control.This article is based on a dissertation submitted to Yale University in partial fulfillment of the requirements for the doctoral degree.     

Multiple RNA structure alignment

Ribonucleic Acid (RNA) structures can be viewed as a special kind of strings where characters in a string can bond with each other. The question of aligning two RNA structures has been studied for a while, and there are several successful algorithms that are based upon different models. In this paper, by adopting the model introduced in Wang and Zhang,(19) we propose two algorithms to attack the question of aligning multiple RNA structures. Our methods are to reduce the multiple RNA structure alignment problem to the problem of aligning two RNA structure alignments. Meanwhile, we will show that the framework of sequence center star alignment algorithm can be applied to the problem of multiple RNA structure alignment, and if the triangle inequality is met in the scoring matrix, the approximation ratio of the algorithm remains to be 2-2(over)n, where n is the total number of structures.     

The pro-dependent folding of microbial proteolytic enzymes

Modern published data on the folding of microbial proteolytic enzymes mediated through their pro-parts, or on a so-called pro-dependent folding, are surveyed. Various aspects related with the functioning of pro-sequences are under discussion. The possibility to build up, on the basis of one and the same amino-acid sequence, the special protein conformers involving different pro-peptides is in the focus of attention.     

Centriole behavior in early mitosis of rat kangaroo cells (PTK2)

Behavior of the centriolar duplexes during early mitosis was investigated. In general, both duplexes are capable of migrating about the cell as a unit with little change in their center to center spacing prior to separation to form the spindle poles. This duplex separation may occur at any point within the mid-prophase-prometaphase period. If it is delayed to prometaphase, transitory monopolar spindles were observed.     

Specializations in the lumbosacral vertebral canal and spinal cord of birds: evidence of a function as a sense organ which is involved in the control of walking

Birds are bipedal animals with a center of gravity rostral to the insertion of the hindlimbs. This imposes special demands on keeping balance when moving on the ground. Recently, specializations in the lumbosacral region have been suggested to function as a sense organ of equilibrium which is involved in the control of walking. Morphological, electrophysiological, behavioral and embryological evidence for such a function is reviewed. Birds have two nearly independent kinds of locomotion and it is suggested that two different sense organs play an important role in their respective control: the vestibular organ during flight and the lumbosacral system during walking.     

Transmission of vibrations in funnel and sheet spider webs.

Behavior of the funnel web building spider, Hololena curta, was observed. The spider is dependent on vibratory signals transmitted through the web. Prey localization usually necessitates two to four pauses and reorientation, and cannot proceed if the prey ceases to struggle. Treating the web as a stretched membrane, we calculated fundamental and overtone normal frequencies and transmission velocities. Unlike the results reported for orb webs, resonance does appear to be a significant factor in the funnel web.     

Vasorelaxant effects of macrocyclic bis(bibenzyls) from liverworts

Vasorelaxant effects of a series of bis(bibenzyls) from liverworts such as Marchantia polymorpha and Marchantia paleacea on rat aorta demonstrated that they relaxed phenylephrine (PE)-induced contractions, which may be mediated through the increased release of NO from endothelial cells as well as opening of K(+) channels, and inhibition of Ca(2+) influx through voltage-dependent Ca(2+) channels (VDCs) and/or receptor-operated Ca(2+) channels (ROCs). Structure-activity relationship based on their structures was discussed. The presence of two aromatic rings which can be connected through two atoms bridge spacer may play an important role for vasorelaxant effect.     

Free immunoglobulin light chains: A role in minimal change disease

Immunoglobulins are tetrameric molecules consisting of two heavy and two light chains linked by disulfide bonds. Single light chains are normally secreted in the plasma under soluble form. These immunoglobulin free light chains circulating in the blood may hold unexpected roles in diseases.Minimal change disease is defined as a renal disease with massive proteinuria and no obvious damage on light microscopy. We hypothesize that minimal change disease is not a primary renal disease but an immune disease due to a defect in B cells mediated by a special immunoglobulin chain. The efficiency of drugs targeting the immune system and the association to Hodgkin disease as well as: (1) the efficiency of B cell depletion to prevent relapse; (2) the association with B leukemia; and (3) the activation of CD23 during relapse point up a primary involvement of B cells. We hypothesize that an immunoglobulin chain with special polymorphism might be the link between the immune system and the dysfunction of the glomerular wall while immunoglobulin depletion leads to a transient remission of proteinuria in graft recurrence of the disease and nephropathy mediated by a monoclonal immunoglobulin chain may feature minimal change disease.Other diseases where free light chains may be involved include atopy, thromboembolism, glomerular inflammatory diseases and autoimmune diseases. We conclude that free circulating light chains, through infinite possibilities of polymorphisms determined by the variable domain are potential disturbing agents of many biological cascades or structures and could likely play the first role in multiple diseases.     

Modelling two possible mechanisms for the regulation of the germinal center dynamics

Research on the germinal center has tried to unravel the mechanisms that control its dynamics. In this study we focus on the termination of the germinal center reaction, which is still an open problem. We propose two hypothetical biological mechanisms that may be responsible for the control of germinal center dynamics and analyze them through mathematical models. The first one is based on the differentiation of follicular dendritic cells and/or T cells. Interaction of these cells in the differentiated state with germinal center B cells would promote B cell differentiation into memory B cells and Ab-forming cells, ending the germinal center reaction. The second mechanism applies only to a scenario without recycling and consists of the decay of a hypothetical proliferation signal for centroblasts that limits the number of cell divisions. Each of the models makes predictions that can be experimentally tested.     

Observation of One Pheophytin a Molecule Not Associated with Primary Photochemistry in the Isolated Photosystem Ⅱ Reaction Center D1/D2/Cyt b559 Complex

Photodamage of pheophytin a (pheo a) in the isolated photosystem Ⅱ (PSⅡ ) reaction center D1/D2/Cyt b559 complex from spinach has been investigated by high performance liquid chromatographic method in detail. The results showed that: (1) There is one pheo a molecule which is not associated with the primary photochemistry in the PS Ⅱ reaction center complex. It may be considered that there are two different electron transfer branches in the PS Ⅱ reaction center just as in the purple bacterium photosynthetic reaction center. (2) The damaged pheo a may be attributed to the one bonding to the D2 protein comparing the D2 subunit in the PS Ⅱ reaction center with M subunit in the purple bacterium photosynthetic reaction center. (3) A possible arrangement model of redox cofactors in the PS Ⅱ reaction center was proposed based on our experiment.     

Experimental evaluation of environmental enrichment of sea turtles

Although behavioral studies have been conducted at zoos and aquaria for years, documentation concerning the effectiveness of environmental enrichment has dealt primarily with terrestrial animals and marine mammals. Few enrichment studies have been conducted on reptiles. For this study, behavioral observations were made on four captive sea turtles (three loggerhead, Caretta caretta, and one blind green, Chelonia mydas) with enrichment present and absent. Enrichment devices were modified for the special needs of the blind turtle. Behaviors were classified as Resting, Pattern Swimming, Random Swimming, Focused Behavior, Aggression, Hiding, Orientation, and Noncategorized Behavior. It was hypothesized that, when enrichment was present, a decrease in Resting and stereotypic Pattern Swimming would be seen along with an increase in Random Swimming and Focused Behavior. It was found that, when no enrichment devices were present, 77% of the turtles' time was spent in Resting and Pattern Swimming. When enrichment devices were provided, 88% of their time was spent in Random Swimming and Focused Behavior with only 8% spent in Pattern Swimming and Resting. Statistically, there were significant increases in Random Swimming (three of the four turtles) and Focused Behavior (4/4) and significant decreases in Resting (3/4) and Pattern Swimming (3/4) when enrichment devices were present. These results suggest that environmental enrichment is as effective with marine reptiles as has been found with other animals and should be encouraged for all captive sea turtles. Zoo Biol 26:407–416, 2007. © 2007 Wiley‐Liss, Inc.     

The effect of activation versus inhibition of feedback on perceived control of EEG activity

This study explores a model in which perceived control is affected by multiple sources of feedback at three different stages of the control sequence--person, response, and outcome. Behavior that enhances feedback is termed activation, while behavior that diminishes feedback is termed inhibition. The study tests the hypothesis that activation at any stage of the sequence leads to greater perceived control than inhibition. Eighty subjects increased or decreased their brain-wave activity (EEG) by making a tone go either on or off, using either an active or a passive strategy. Following 10 60-second trials, subjects rated their perception of control over their EEG activity. The hypothesis that making a tone go on (activation of the outcome) leads to a greater perception of control than making the tone go off (inhibition of the outcome) was confirmed only when subjects decreased their EEG activity. Perceived control was not significantly correlated with actual control, supporting the expectation that they are separately mediated. The results did not support the hypothesis that increasing EEG activity or using an activity strategy would lead to a greater perception of control than decreasing EEG or using a passive strategy. These findings are interpreted as evidence that attention to feedback may be necessary for the predicted bias in perceived control to occur, and that activation and inhibition should be operationalized as the absolute presence versus absence of feedback in testing the hypothesis for the first two stages of control.     

Protein accumulation in aleurone cells,sub-aleurone cells and the center starch endosperm of cereals

There are mainly three endosperm storage tissues in the cereal endosperm: aleurone cells, sub-aleurone cells and the center starch endosperm. The protein accumulation is very different in the three endosperm storage tissues. The aleurone cells accumulate protein in aleurone granules. The sub-aleurone cells and the center starch endosperm accumulate protein in endoplasmic reticulum-derived protein bodies and vacuolar protein bodies. Proteins are deposited in different patterns within different endosperm storage tissues probably because of the special storage properties of these tissues. There are several special genes and other molecular factors to mediate the protein accumulation in these tissues. Different proteins have distinct functions in the protein body formation and the protein interactions determine protein body assembly. There are both cooperation and competition relationships between protein, starch and lipid in the cereal endosperm. This paper reviews the latest investigations on protein accumulation in aleurone cells, sub-aleurone cells and the center starch endosperm. Useful information will be supplied for future investigations on the cereal endosperm development.