从多角度分析SARS-CoV-2和SARS冠状病毒(SARS-CoV)差异

新型冠状病毒肺炎(COVID-19)在全球范围内持续肆虐,感染人数与日俱增.COVID-19的病毒SARS-CoV-2与2003年发生的严重急性呼吸系统综合症冠状病毒(SARS coronavirus,SARS-CoV)同属冠状病毒.本研究就COVID-19与SARS冠状病毒的差异以及两种冠状病毒的中间宿主进行分析和探...     

抗SARS-CoV N蛋白单克隆抗体的特异性及其识别抗原表位的初步鉴定

为了明确抗SARS-CoVN蛋白单克隆抗体的特异性,并鉴定其识别表位,首先在E.coli中表达了人类冠状病毒229E(HCoV-229E)和OC43(HCoV-OC4)N蛋白,用Westernblotting和间接免疫荧光方法分别检测了4株抗SARS-CoVN蛋白单克隆抗体(1-1C2、1-1D6、2-8F11和2-2E5)与HCoV-OC43和HCoV-229E及其N蛋白的交叉反应情况,而后应用12种重组截短型SARS-CoVN蛋白对上述4种单克隆抗体的识别表位进行了初步定位。结果显示:(1)在4株抗N蛋白单克隆抗体中,1-1C2、1-1D6和2-2E5不与HCoV-OC43和HCoV-229E及其N蛋白发生交叉反应,为SARS-CoVN蛋白特异性抗体;(2)2-8F11、1-1D6和2-2E5针对的抗原表位位于SARS-CoVN蛋白的aa30-60,1-1C2针对的抗原表位则位于SARS-CoVN蛋白的aa170-184。这一研究为阐明SARS-CoVN蛋白的免疫学特征,建立特异性免疫诊断技术和研究其致病机制提供了必要的依据和材料。     

抗SARS-CoV N蛋白单克隆抗体的特异性及其识别抗原表位的初步鉴定

为了明确抗SARS-CoV N蛋白单克隆抗体的特异性,并鉴定其识别表位,首先在E.coli中表达了人类冠状病毒229E(HCoV-229E)和OC43(HCoV-OC4)N蛋白,用Western blotting和间接免疫荧光方法分别检测了4株抗SARS-CoV N蛋白单克隆抗体(1-1C2、1-1D6、2-8F11和2-2E5)与HCoV-OC43和HCoV-229E及其N蛋白的交叉反应情况,而后应用12种重组截短型SARS-CoV N蛋白对上述4种单克隆抗体的识别表位进行了初步定位.结果显示(1)在4株抗N蛋白单克隆抗体中,1-1C2、1-1D6和2-2E5不与HCoV-OC43和HCoV-229E及其N蛋白发生交叉反应,为SARS-CoV N蛋白特异性抗体;(2)2-8F11、1-1D6和2-2E5针对的抗原表位位于SARS-CoV N蛋白的aa 30-60,1-1C2针对的抗原表位则位于SARS-CoV N蛋白的aa 170-184.这一研究为阐明SARS-CoVN蛋白的免疫学特征,建立特异性免疫诊断技术和研究其致病机制提供了必要的依据和材料.     

用SARS冠状病毒全基因组芯片杂交方法分析SARS-CoV

为从临床样品中检测和分析SARSCoV病毒打基础,并为分析SARSCoV病毒的复制和转录等机理提供一种有效方法。以SARS冠状病毒TOR2株序列作为标准设计和制备一种覆盖SARS冠状病毒全基因组的寡聚核苷酸芯片,探针长度为70nt,每相邻的探针序列重复25nt,共660条。用该芯片分析了细胞培养的SARSCoV病毒总RNA、7个SARSCoV病毒的基因克隆片段。对RNA样品用随机引物进行反转录PCR获得cDNA。对DNA用随机引物扩增和dUTPcy3标记。结果用这种芯片杂交检测SARSCoV病毒RNA可见阳性信号呈全基因组分布,并且有多处连续的阳性信号点;用正常人的白细胞RNA为对照,杂交未出现明显阳性信号。检测7个SARSCoV病毒基因克隆片段,在该片段相应的探针区段出现连续阳性信号点。这种方法可有效地检测和分析样品中SARS冠状病毒全基因组的信息。     

SARS冠状病毒基因结构中未知蛋白Orf7的研究

为探讨SARS-CoV未知蛋白在基因表达调控中的作用,本研究以鉴定的SARS-CoV BJ01毒株cDNA为材料,采用PCR方法扩增SARS-CoV未知蛋白基因Orf7,Orf8,Orf9,引入GFP和pDsRed作为报告基因,构建出5种表达质粒pEGFP-Orf7,pEGFP-Orf8,pEGFP-Orf79,pcDNA3-Orf7,pcDNA3-Orf8.进行体外转染实验后,采用荧光酶标仪测量其细胞中荧光蛋白的表达量,再采用流式细胞仪进一步进行瞬时表达的分析比较.结果发现,pcDNA3-Orf7与pEGFP共转染时,pcDNA3-Orf7能够增强绿色荧光蛋白(GFP)的表达,pEGFP-Orf7与pDsRed共转染时pEGFP-Orf7可以增强红色荧光蛋白(RFP)的表达,且同时表达红色和绿色荧光的细胞数增加.本文首次证明了ORF7编码的63个氨基酸的蛋白具有反式激活作用,即为SARS-CoV自身的反式激活因子.     

SARS-CoV感染Vero E6细胞诱导细胞凋亡

为了确定SARS冠状病毒(SARS-CoV)感染Vero E6是否引起细胞凋亡,我们利用细胞DNA琼脂糖电泳,感染细胞的间接荧光染色和Hoechst 33258细胞核染色,以及流式细胞仪分析等方法证明了SARS-CoV感染的Vero E6具有典型的凋亡细胞学和生物化学特征.实验证明具有细胞凋亡特征的所有细胞均为处于感染晚期的细胞.表现明显细胞病变(CPE)的细胞大多已经出现核质凝缩或形成凋亡小体进入细胞凋亡的过程.可以断定SARS-CoV感染Vero E6细胞诱发了细胞凋亡.     

SARS-CoV-2与SARS-CoV:病原学、流行病学、临床与病理

2019年12月在武汉暴发了由SARS-CoV-2感染引起的新型冠状病毒肺炎(Coronavirus disease 2019,COVID-19),并迅速扩散至全国.SARS-CoV-2和SARS冠状病毒(SARS-CoV)都属于套式病毒目、冠状病毒科、冠状病毒属中的SARS相关冠状病毒种,本文总结了两者在来源、病毒结构、流行病学、临床表现和病理学特征等方面的差异,以期更全面认识SARS-CoV和SARS-CoV-2,为COVID-19的防治研究提供帮助.     

SARS病毒与其他冠状病毒的基因组比较

本文利用生物信息学方法比较SARS病毒和其他冠状病毒基因组.通过数据库搜索,找出与SARS病毒基因组相似的核酸或蛋白质序列,并对相似序列进行比对,分析它们的共性和差异.结果表明,SARS病毒在基因组的组织上及结构蛋白质方面与现有冠状病毒有比较大的相似性,SARS病毒基因组与冠状病毒基因组相关.但是,SARS病毒基因组还存在一些特异性序列,ORF1a和S蛋白(特别是S1)的变化以及SARS-CoV特异性的非结构蛋白可能是SARS发病机理与传染特性区别于其他冠状病毒的分子基础.在全基因组水平上进行核酸单词出现频率分析,结果表明,SARS病毒远离已知的其他冠状病毒,单独成为一类.     

马抗SARS-CoV免疫球蛋白对SARS-CoV GZ-01株中和作用的研究

观察马抗SARS-CoV免疫球蛋白对SARS-CoV GZ-01毒株的中和作用,为马抗SARS-CoV免疫球蛋白用于SARS的治疗提供科学的依据。采用CPE、MTT测定马抗SARS-CoV免疫球蛋白对SARS-CoV GZ-01株的中和作用。结果显示,马抗SARS-CoV免疫球蛋白F(ab’)2治疗性抗体对SARS-CoV GZ-01株具有很好的中和作用,三批马抗SARS-CoV免疫球蛋白的CPE和MTT中和效价分别达到1:6400、1:6400、1:12800,且两种方法测得结果一致。     

SARS冠状病毒的分离培养与鉴定

采集急性期病人的咽拭子或漱口液,用Vero 、Vero E6、MDCK、Hela 、Hep-2等传代细胞,人胚肺二倍体细胞(HEL)和人胚肺(HP)细胞分离培养严重急性呼吸系统综合症(SARS)的病原体.结果用Vero、Vero E6、MDCK和HP细胞从标本中分离到一株病毒.间接免疫荧光试验发现,恢复期病人血清可与所分离的病毒起反应,在胞膜和胞浆中出现翠绿色荧光;中和试验结果表明,恢复期病人血清能中和病毒对细胞的致细胞病变作用;电镜下可观察到冠状病毒样颗粒;RT-PCR法可扩增到冠状病毒特异性基因片段,且其核苷酸序列与国内外发表的SARS冠状病毒(SARS-Cov)相应的基因序列相符,同源性达到100%.从传染性非典型肺炎病人的漱口液中分离到SARS冠状病毒,这种病毒与传染性非典型肺炎密切相关.     

细胞密度和感染复数对SARS病毒在Vero细胞中增殖的影响

阐明宿主细胞密度和病毒感染复数(MOI)对SARS冠状病毒增殖的影响,为SARS灭活疫苗的研究奠定基础。采用析因设计方法,考虑MOI(0.01、0.05和0.1)与细胞密度(2×104、4×104和8×104/cm2)2个3水平实验因素,在各水平组合条件下培养SARS病毒,以组织培养半数感染量(TCID50)作为观测指标,分析SARS冠状病毒滴度在不同增殖条件下的差异。结果表明,MOI、宿主细胞密度和二者之间的交互作用对SARS病毒滴度的影响分别具有非常显著性差异(F=12.70,P<0.01)、显著性差异(F=6.94,P<0.05)和非常显著性差异(F=8.22,P<0.01)。在0.01MOI和8×104/cm2条件下,病毒滴度达5.57×105TCID50/mL。说明SARS冠状病毒在培养细胞中的增殖能力显著依赖于宿主细胞密度、病毒感染复数和二者的交互作用。     

SARS病毒基因组的多态性

对SARS病人粪便样本直接测序,得到SRAS—CoV BJ202全基因组序列（AY864806）。应用比较基因组研究方法对GenBank中公布的115株SARS—CoV基因组序列以及BJ202进行分析。以GZ02序列为参照,发现2个以上基因组中同时存在单核苷酸多态（SNP）位点共278个。多态位点在SARS—CoV基因组中呈偏态分布,大约一半突变位点（50．4％,140／278）发生在基因组3’末端1／3区域。编码Orf10-11、Orf3／4、E蛋白、M蛋白和S蛋白区域突变率较高。克隆并测序含有BJ202基因组12个多态位点的11个cDNA以及4个不含已知多态位点的cDNA片段（15个片段总长度为6．0kb）,结果显示：BJ202特有的3个多态位点（13804、1503l和20792）以及另外3个多态位点（26428、26477和27243）均检出两种不同核苷酸;位点18379虽在已公布的115株SARS—CoV基因组中未发现突变,实际上也是多态位点。14个克隆中有8个克隆该位点为A,6个克隆为G。全部116个SARS—CoV基因组中共有18种缺失类型和2种插入类型。大部分缺失发生在编码ORF9和ORF10-11区域（基因组序列27700—28000bp处）。以邻位连接法（Neighbor-Joining）构建了116株SARS—CoV系统发育树,BJ202与BJ01和LLJ-2004等SARS—CoV的亲缘关系较接近。     

SARS病毒的形态结构及其在体外培养细胞中的感染装配

人冠状病毒1965年由Tyrrell等从人胎儿器官培养(HET-OC)中最初分离.其后Hamre和Kapikian等从组织培养中分离了病毒[4].     

狂犬病毒CTN—1株在Vero细胞上的适应传代研究

本文报导了用我国狂犬病毒固定毒人二倍体细胞适应株（ＣＴＮ－１）进行Ｖｅｒｏ细胞适应传代研究。通过连续传代培养,滴度可达８．０１ｏｇＬＤ５０／ｍｌ,达到了ＷＨＯ规定的不需浓缩的标准。病毒用０．０１ＭＯＩ感染细胞其产量与１Ｍｏｌ感染量相仿。病毒增殖高峰在４－５天,维持达１５天无明显下降,且可连续收获４－５次。因此,该毒种符合ＷＨＯ提出的疫苗生产毒种要求,可用于狂犬病疫苗生产。     

Marine Invertebrate Cell Cultures: New Millennium Trends

This review analyzes activities in the field of marine invertebrate cell culture during the years 1999 to 2004 and compares the outcomes with those of the preceding decade (1988 to 1998). During the last 5 years, 90 reports of primary cell culture studies of marine organisms belonging to only 6 taxa (Porifera, Cnidaria, Crustacea, Mollusca, Echinodermata, and Urochordata) have been published. This figure represents a 2-fold increase in the annual number of publications over the decade 1988 to 1998. Three other trends distinguish the two reviewed periods. First, in recent years studies attempting to improve cell culture methodologies have decreased, while interest in applications of already existing methodologies has increased. This reflects the effects of short-term cultures in attracting new researchers and scientific disciplines to the field. Second, only 17.8% of the recent publications used long-term cultures, compared with 30.0% of the publications in the previous decade. Third, during recent years research in cell cultures has studied fewer model species more extensively (mainly, Botryllus schlosseri, Crassostrea, Mytilus, Penaeus, and Suberites domuncula), signifying a shift from previous investigations that had studied a more diverse range of organisms. From 1988 to 1998 the phylum Mollusca was the most studied taxon (34.4%), but recent years have seen more studies of Porifera and Crustacea (30.0% and 32.2% of publications) than of Mollusca (21.1%). Still, not even a single established cell line from any marine invertebrate has yet been made available. However, the use of new cellular, genomic, and proteomic tools may fundamentally change our strategy for the development of cell cultures from marine invertebrates.     

SARS病毒的形态结构及其在体外培养细胞中的感染装配

Morphological characterization of purified SARS-associated virus(SARS-CoV) from Hubei patient was carried out by negative stain and ultrathin section electronmicroscopy. The spike of isolated SARS-CoV virus is shorter and smaller than Human coronavirus. A large quantity of SARS-CoV particles could be observed in the infected Vero cells. The process of infection, assembly and morphogenesis was observed.     

Morphological variety of intracellular microcolonies of Legionella species in Vero cells

Intracellular microcolonies of six Legionella species growing in Vero cells showed distinctly varied morphologies. The varieties were observed by light microscopy of Gimenez-stained, Legionella-infected Vero cells and by electron microscopy (EM). Legionella pneumophila Philadelphia-1 formed needle-shaped crystal-like microcolonies. Legionella bozemanii WIGA formed microcolonies like wool balls containing filamentous cells. In EM, these organisms proliferated in endosomes, which were adjacent to swollen rough endoplasmic reticula. Legionella oakridgensis OR-10 showed serpentine chains. Many mitochondria were observed around the microcolonies. Legionella jordanis BL-540 formed spherical moss-like microcolonies which were or were not surrounded by endoplasmic membranes. Legionella feeleii WO-44C spread throughout the cytoplasm without making clusters. Legionella dumoffii Tex-KL made big clusters that spread in the cytoplasm, a portion of which was outside the endosome membranes. These different morphologies imply diversity in modes of intracellular multiplication of Legionella spp.     

Effect of Halothane in Cortical Cell Cultures Exposed to N-Methyl-D-Aspartate

In vivo studies have shown potent protection by volatile anesthetic agents against cerebral ischemic insults. Volatile agents have also been shown to antagonize glutamatergic neurotransmission at the N-methyl-D-aspartate (NMDA) receptor. This study examined the potential for halothane to reduce neuronal excitotoxic lesions caused by NMDA. Fetal rat cortical cell cultures were allowed to mature 13–16 d. Culture wells (n = 13–16) were treated with 0 mM – 3.96 mM halothane in the presence/absence of 30 M NMDA. Additional cultures were exposed to 30 M NMDA in the presence/absence of 10 M MK-801 or 10 ACEA 1021. Cellular lethality was assessed by measurement of lactate dehydrogenase (LDH) 24 hrs later. A maximal effect of halothane was observed at 0.70 mM (2.1 vol%) wherein a 36% reduction in NMDA-stimulated LDH release occurred relative to untreated controls. Both MK-801 and ACEA 1021 caused complete inhibition of NMDA-stimulated LDH release. These data confirm that halothane has modulatory effects at the NMDA receptor but potency of this drug is less than that of specific antagonists of either glutamate or glycine. These findings suggest that halothane protection in vivo can be partially explained by anti-excitotoxic properties although other mechanisms of action are probably also important.