Monosaccharide composition of exopolymer complex in Thiobacillus thioparus and Stenotrophomonas maltophilia

The bacteria of Thiobacillus thioparus and Stenotrophomonas maltophilia are capable to form a thick biofilm complicated as to its structure on the surface of low-carbon steel. This biofilm formation on any surface occurs under the adhesion of the cells of the plankton growth model with the help of synthesis of muciferous exopolymers with adhesive properties. Hence the monosaccharide composition of the exopolymer complex in the form of polyol acetates was studied by chromate-mass-spectrum method. A significant difference in the composition of exopolymer monosaccharides with the presence of steel model in the medium and without it was established; a change in the monosaccharide composition of mono- and binary culture in the conditions of plankton and biofilm growth was also observed.     

Increasing prevalence of the marine cladoceran Penilia avirostris (Dana, 1852) in the North Sea

Rising sea surface temperatures in the North Sea have had consequential effects on not only indigenous plankton species, but also on the possibility of successful colonisation of the area by invasive plankton species. Previous studies have noted the introduction and integration into the plankton community of various phytoplankton species, but establishment of zooplankton organisms in the North Sea is less well-documented. Examining continuous plankton recorder (CPR) survey data and zooplankton results from the Helgoland Roads study, the autumn of 1999 witnessed the occurrence of the marine cladoceran Penilia avirostris in large numbers in the North Sea. The rapid appearance of the species corresponded with exceptionally warm sea surface temperatures (SSTs). Since 1999, the species has become a regular feature of the autumnal zooplankton community of the North Sea. In 2002 and 2003, the species occurred in greater abundance than recorded before. It is suggested that increased autumn SSTs have proved favourable to P. avirostris, with warmer conditions contributing to the success of the species resting eggs and aiding colonisation.Communicated by H.-D. Franke     

The co-evolution of phytoplankton and trace element cycles in the oceans

The composition of the oceans and of its biota have influenced each other through Earth's history. Of all the biologically essential elements, nitrogen is the only one whose seawater concentration is clearly controlled biologically; this is presumably the main reason why the stoichiometry of nitrogen (defined as its mol ratio to phosphorus), but not that of the trace nutrients manganese, iron, cobalt, nickel, copper, zinc and cadmium, is the same in seawater and in the plankton. Like the major nutrients, the trace nutrients are depleted in surface seawater as a result of quasi-complete utilization by the biota. This is made possible in part by the ability of marine phytoplankton to replace one trace metal by another in various biochemical functions. This replacement also results in an equalization of the availability of most essential trace metals in surface seawater. The difference in the stoichiometric composition of the plankton and of deep seawater, which is the dominant source of new nutrients to the surface, indicates that some nutrients are likely recycled with different efficiencies in the photic zone. The difference in the composition of the ocean and its biota provides insight into the coupling of biochemistry and biogeochemistry in seawater.     

Diel patterns of UVBR-induced DNA damage in picoplankton size fractions from the Gulf of Aqaba,Red Sea

This study focuses on the impact of natural levels of UVBR (ultraviolet-B radiation: 280 to 315 nm) on bacterio- and phytoplankton (<10 mm) from the Gulf of Aqaba, Red Sea. Incident biologically effective doses (BEDs) and attenuation of biologically effective radiation in the water column were measured using a DNA biodosimeter. UVBR-induced DNA damage was measured as cyclobutane pyrimidine dimers (CPDs), using an antibody directed to CPDs followed by chemiluminescent detection. Depth profiles of DNA damage were determined in two plankton size fractions (0.2 to 0.8 mm and 0.8 to 10 mm) collected down to 50 m depth. Furthermore, accumulation and removal of CPDs were monitored in surface plankton samples during several daily cycles. Small plankton (plankton <10 mm) composition was determined by flow cytometry. The plankton community in the Gulf of Aqaba was dominated by nonphototrophic bacteria and the free-living prochlorophyte Prochlorococcus spp. (<0.8 mm). In general, no DNA damage could be detected in dosimeter DNA below 15 m. In contrast, DNA damage (up to 124 CPD Mnucl-1) could be detected in all bacterio- and phytoplankton samples. DNA damage accumulated throughout the day, indicating that plankton in the Gulf of Aqaba undergo UVBR stress via CPD induction. Although the numbers of CPDs decreased during darkness, both size fractions showed some residual DNA damage at the end of the night. This suggests that dark repair processes did not remove all CPDs, or that part of the plankton community was incapable of repair at all. CPD levels in the two size fractions showed no significant differences in situ. During full solar radiation exposures (samples incubated in bags), more CPDs were detected in the smaller (0.2 to 0.8 mm) size fraction as compared to the larger (0.8 to 10 mm) size fraction. In these experiments, initial plankton composition was significantly different from the field samples. This implies that a shift in the population structure or irradiance conditions can lead to a significant change in UVBR sensitivity. In conclusion, the results show that the picoplankton-dominated phyto- and bacterioplankton communities in the clear surface waters from the Gulf of Aqaba undergo UVBR stress. Repair pathways are not sufficient to eliminate damage during or after UVBR exposure hours, suggesting photomortality as a potential loss parameter of the plankton community.     

Field and laboratory studies of the feeding behaviour of the piper Hyporhamphus ihi with reference to the role of the lateral line in feeding

Piper school in large groups close to the water surface during daylight hours, whereas at night the schools break up and individual fish can be observed swimming slowly through the water. Analysis of gut contents indicates that during the day piper feed primarily on copepods, and terrestrial insects trapped on the water surface; after dark the demersal zooplankton which enter the water column form the major dietary component. Prey selectivity is evident in that certain groups present in the plankton are not found in the stomach contents of piper, and that the size of prey taken is biased towards the larger size classes of plankton. Laboratory experiments establish that piper are capable of locating prey in total darkness, and that under these conditions live prey are consumed in a higher proportion, and much more quickly than dead prey. These results strengthen the hypothesis that piper use their anterior lateral line to feed on zooplankton at night.     

Comparative metagenomics of bathypelagic plankton and bottom sediment from the Sea of Marmara

To extend comparative metagenomic analyses of the deep-sea, we produced metagenomic data by direct 454 pyrosequencing from bathypelagic plankton (1000 m depth) and bottom sediment of the Sea of Marmara, the gateway between the Eastern Mediterranean and the Black Seas. Data from small subunit ribosomal RNA (SSU rRNA) gene libraries and direct pyrosequencing of the same samples indicated that Gamma- and Alpha-proteobacteria, followed by Bacteroidetes, dominated the bacterial fraction in Marmara deep-sea plankton, whereas Planctomycetes, Delta- and Gamma-proteobacteria were the most abundant groups in high bacterial-diversity sediment. Group I Crenarchaeota/Thaumarchaeota dominated the archaeal plankton fraction, although group II and III Euryarchaeota were also present. Eukaryotes were highly diverse in SSU rRNA gene libraries, with group I (Duboscquellida) and II (Syndiniales) alveolates and Radiozoa dominating plankton, and Opisthokonta and Alveolates, sediment. However, eukaryotic sequences were scarce in pyrosequence data. Archaeal amo genes were abundant in plankton, suggesting that Marmara planktonic Thaumarchaeota are ammonia oxidizers. Genes involved in sulfate reduction, carbon monoxide oxidation, anammox and sulfatases were over-represented in sediment. Genome recruitment analyses showed that Alteromonas macleodii ‘surface ecotype'', Pelagibacter ubique and Nitrosopumilus maritimus were highly represented in 1000 m-deep plankton. A comparative analysis of Marmara metagenomes with ALOHA deep-sea and surface plankton, whale carcasses, Peru subsurface sediment and soil metagenomes clustered deep-sea Marmara plankton with deep-ALOHA plankton and whale carcasses, likely because of the suboxic conditions in the deep Marmara water column. The Marmara sediment clustered with the soil metagenome, highlighting the common ecological role of both types of microbial communities in the degradation of organic matter and the completion of biogeochemical cycles.     

The Diatom Flora of Bethany Boǵ

The results of these studies indicate that the first diatom flora developed at the 13-meter level. The flora at 12 meters increased. At the 11- and 9-meter levels the lake became increasingly eutrophic. Both plankton and benthic forms were present. At the 8- and 7-meter levels the lake was in a transitional stage from lake to bog conditions. From 6 meters to the surface bog conditions were present.     

Global microbial ecology: biogeography and diversity of Vibrios as a model

An environmental source of cholera was hypothesized as early as the late nineteenth century by Robert Koch, but not proven because of the ability of Vibrio cholera, the causative agent of cholera, to enter a dormant phase between epidemics. Standard bacteriological procedures for isolation of the vibrios from the environmental samples, including water, between epidemics generally were unsuccessful. Vibrio cholera, a marine vibrio requiring salt for growth, enters into a dormant 'viable but non-culturable' stage when conditions are unfavourable for growth and reproduction. The association of V. cholera with plankton, notably copepods, provides evidence for the environmental origin of cholera, as well as an explanation for the sporadic and erratic nature of cholera epidemics. Thus, the association of V. cholera with plankton was established only recently, allowing analysis of epidemic patterns of cholera, especially in those countries where cholera is endemic. The sporadic and erratic nature of cholera epidemics can now be related to climate and climate events, such as El Ni?o. Since zooplankton have been shown to harbour the bacterium and zooplankton blooms follow phytoplankton blooms, remote sensing can be employed to determine the relationship of cases of cholera with chlorophyll, as well as sea surface temperature (SST), ocean height, and turbidity. Cholera occurs seasonally in Bangladesh with two annual peaks in the number of cases occurring each year. From the data obtained and analysed to date, when the height of the ocean is high and sea surface temperature is also elevated, cholera cases are numerous. When the height is low and sea surface temperature is also low, little or no cholera is recorded. From the examination of data for the 1992-1993 cholera epidemic in India, preliminary comparisons of cholera data for Calcutta show a similar relationship between cholera cases, ocean height and SST. In conclusion, from results of studies of SST, phytoplankton and zooplankton, and their relationships to incidence of cholera, correlation of selected climatological factors and incidence of V. cholera appears to be significant, bringing the potential of predicting conditions conducive to cholera outbreaks closer to reality.     

In situ UVA exposure modulates change in the uptake of radiophosphate in size-fractionated plankton assemblages following UVR exposure

We investigated the effect of ultraviolet radiation (UVR) on the uptake and partitioning of radiophosphate ((33)PO (4) (3-) ) in size-fractionated plankton assemblages (0.2-0.8, 0.8-2.0 and >2.0?μm) collected from nine freshwater lakes located in Saskatchewan, Canada. A significant (p?2.0?μm were generally unaffected by UVR, whereas the 0.2-0.8?μm size fraction exhibited severe photoinhibition. The effect of UVR on the 0.8-2.0?μm size fraction was variable, ranging from significant reductions to significant increases in (33)PO (4) (3-) uptake. The >2.0?μm size fraction was composed of a diversity of phytoplankton genera, suggesting that P uptake mechanisms for a range of phytoplankton are resistant to UVR. Our ability to detect a UVR effect on specific plankton size fractions was confounded by the resolution of the analysis. That is, only examining the <2.0 and >2.0?μm size fractions concealed the effect of UVR on plankton <0.8?μm. The magnitude of decrease in P uptake by plankton <0.8?μm was significantly and negatively correlated with in situ UVA exposure. Our results underscore the need for studies to consider both the size resolution of their analysis (i.e., the size of target organisms) and the ambient light conditions under which organisms may have acclimated before generalizing results across limnetic systems.     

The mannose-sensitive hemagglutinin of Vibrio cholerae promotes adherence to zooplankton.

The bacterium Vibrio cholerae, the etiological agent of cholera, is often found attached to plankton, a property that is thought to contribute to its environmental persistence in aquatic habitats. The V. cholerae O1 El Tor biotype and V. cholerae O139 strains produce a surface pilus termed the mannose-sensitive hemagglutinin (MSHA), whereas V. cholerae O1 classical biotype strains do not. Although V. cholerae O1 classical does not elaborate MSHA, the gene is present and expressed at a level comparable to that of the other strains. Since V. cholerae O1 El Tor and V. cholerae O139 have displaced V. cholerae O1 classical as the major epidemic strains over the last fifteen years, we investigated the potential role of MSHA in mediating adherence to plankton. We found that mutation of mshA in V. cholerae O1 El Tor significantly diminished, but did not eliminate, adherence to exoskeletons of the planktonic crustacean Daphnia pulex. The effect of the mutation was more pronounced for V. cholerae O139, essentially eliminating adherence. Adherence of the V. cholerae O1 classical mshA mutant was unaffected. The results suggest that MSHA is a factor contributing to the ability of V. cholerae to adhere to plankton. The results also showed that both biotypes of V. cholerae O1 utilize factors in addition to MSHA for zooplankton adherence. The expression of MSHA and these additional, yet to be defined, adherence factors differ in a serogroup- and biotype-specific manner.     

Paleoenvironmental conditions preceding the Messinian Salinity Crisis in the Central Mediterranean: Integrated data from the Upper Miocene Trave section (Italy)

Integrated data of calcareous plankton and benthic foraminifers from the pre-evaporitic interval of Trave section (Central Italy) allowed the reconstruction of surface and bottom-water conditions in the Central Mediterranean during the interval from 7.61 to 6.33 Ma, preceding the Messinian Salinity Crisis.Our data point out a three-step paleoenvironmental evolution. During the first stage (7.61-7.02 Ma) benthic foraminiferal assemblages depict stable, well-oxygenated and ventilated bottom-water conditions, while the surface water records variable temperature and high nutrient conditions, probably associated with strong seasonality. The second stage (7.02-6.70 Ma) points to unfavourable bottom-water condition, triggered by deep-sea stagnation. This is witnessed by a significant decrease in oxygen concentration and biotic diversity, and by the presence of stress-tolerant taxa. A general warming of the surface water and a strongly stratified water column, characterized by an expanded mixed layer, are also recorded.From 6.70 Ma onwards (third stage), a prominent change to more restricted, low-oxygenated, hypersaline conditions at the sea floor is testified by the total disappearance of deep-dwelling planktonic foraminifers and the increasing abundance of stress-tolerant species. Calcareous plankton reflects high instability of the surface water in terms of nutrients, temperature and salinity. During this stage the environmental deterioration reaches intermediate depths in the water column.The initial change toward a step-wise isolation of the Central Mediterranean bottom-waters is probably related to a general warming, responsible for a first slowing-down of the vertical circulation, favouring stratification of surface and intermediate waters and stagnation of bottom-waters. This warming is related to the restricted connection between the Mediterranean Sea and the Atlantic Ocean, which occurred since 7.146 Ma.In the Trave section, the isolation of bottom-waters most likely occurred at the same time as in other Mediterranean sections. However, due to the presence of a hiatus it cannot be excluded that it occurred with a delay of ~ 100 kyr, probably related to the shallower paleodepth of the basin.     

Radiolarian distribution in the water column,southern Gulf of California,and its implication in thanatocoenose constitution

The geographical and depth distributions of five radiolarian plankton assemblages, defined through Q-mode Factor Analysis of 24 plankton samples, demonstrate a direct correspondence to the distribution of oceanographic water masses in the southern Gulf of California. Two assemblages are associated exclusively with water masses of the mixed-layer, two represent only subsurface water masses, and one is important in both surface and subsurface environments. The Lithomelissa thoracites group and Peridium spinipes are predominant species in water that is formed at the surface of the Guaymas Basin and subsequently is subducted southward into the Carmen Basin. Plagiocantha panarium is the predominant species in upwelled surface water at the Carmen Basin, while Tetrapyle octhacanta and Botryostrobus scutum follow the incursion of the Subtropical Water Mass into the Gulf of California through the Pescadero and Farallon Basins. Druppatractus variabilis and Porodiscus sp. B occur conspicuously in the upper layer of the Pacific Intermediate Water between approximately 400 and 700 m water depth. Statistical correlation between plankton and sediment assemblages supports previous evidence that the radiolarian thanatocoenose in the Gulf of California is composed primarily of species from the surface mixed-layer. Two exceptions to this are observed in the data. First, the upwelling plankton assemblage was not well correlated to the sediment assemblage, and second, input to the sediment during glacial stages appears to be dominated by subsurface forms.     

Changes in Microbial Plankton Assemblages Induced by Mesoscale Oceanographic Features in the Northern Gulf of Mexico

Mesoscale circulation generated by the Loop Current in the Northern Gulf of Mexico (NGOM) delivers growth-limiting nutrients to the microbial plankton of the euphotic zone. Consequences of physicochemically driven community shifts on higher order consumers and subsequent impacts on the biological carbon pump remain poorly understood. This study evaluates microbial plankton <10 μm abundance and community structure across both cyclonic and anti-cyclonic circulation features in the NGOM using flow cytometry (SYBR Green I and autofluorescence parameters). Non-parametric multivariate hierarchical cluster analyses indicated that significant spatial variability in community structure exists such that stations that clustered together were defined as having a specific ‘microbial signature’ (i.e. statistically homogeneous community structure profiles based on relative abundance of microbial groups). Salinity and a combination of sea surface height anomaly and sea surface temperature were determined by distance based linear modeling to be abiotic predictor variables significantly correlated to changes in microbial signatures. Correlations between increased microbial abundance and availability of nitrogen suggest nitrogen-limitation of microbial plankton in this open ocean area. Regions of combined coastal water entrainment and mesoscale convergence corresponded to increased heterotrophic prokaryote abundance relative to autotrophic plankton. The results provide an initial assessment of how mesoscale circulation potentially influences microbial plankton abundance and community structure in the NGOM.     

Distribution fields for aquatic ecosystem components: method of identification of correlation zones

1. Data from the two multidisciplinary surveys of Lake Kinneret (Israel), including acoustic surveys of fish concentrations and concurrent sampling of plankton at stations, were used to reconstruct fish and plankton distributions. No significant lake-wide correlations for the distribution fields were found. With respect to patchiness of the fish and plankton distributions, we hypothesized that they might be correlated in localized zones. 2. A method is suggested for the identification of areas where there are strong correlations of two distribution fields. The method is based on outlining zones where the gradients of the two fields of interest are in the same direction (or are opposite). Only areas larger than the autocorrelation circles (or ellipses) for the fields are considered. The correlation of the fields is calculated for each of the zones selected. 3. The method was used in analysing data from the multidisciplinary surveys. We were able to detect areas of the lake where there were correlations for fish and plankton distributions. Analysis of specific conditions inside the correlation zones made it possible to construct hypotheses concerning the causes for the observed patterns of fish and plankton distributions.     

Biological activity in the wake of an island close to a coastal upwelling

Hydrodynamic forcing plays an important role in shaping the dynamics of marine organisms, in particular of plankton. In this work we study the planktonic biological activity in the wake of an island which is close to an upwelling region. Our research is based on numerical analysis of a kinematic flow mimicking the hydrodynamics in the wake, coupled to a three-component plankton model.We use parameter values relevant for the Canary wake, and the main results for a realistic range of parameters in this area are as follows: (a) Primary production is enhanced in the region of the wake opposite to the upwelling zone. (b) There is a strong dependence of the productivity on the inflow conditions of biological material entering the wake transported by the main current. Finally (c) we show that under certain conditions the interplay between wake structures and biological growth leads to plankton blooms inside mesoscale hydrodynamic vortices that act as incubators of primary production.     

The Adaptation of Plankton Algae

A survey of the adaptation of plankton algae in Nature to different light intensities and temperatures is given. The adaptation is always important for the plankton populations at all depths. However, the shade adaptation of the algae in the lower part of the photic zone is often of relatively little importance for the integral primary production per unit of surface, except on the by no means rare occasions when the bulk of the algae is found in this lower part. It is shown that the I_k of surface plankton during summer in the Arctic is high despite the low temperatures present. This is due to an increase of the enzyme quantities per cell. Daily fluctuations in I_k are due partly to photooxidation, partly to the fact that the periods for the production of chlorophyll and photosynthetic enzymes are mutually displaced. Despite the daily fluctuations in I_k the difference between “sun” pbytoplankton and “shade” pbytoplankton is distinct.     

Observations on the incidence and seasonal fluctuations of certain crustacean larvae in the plankton of the South-West Coast of India

The seasonal fluctuations in the incidence of planktonic organisms and the larval forms of certain crustaceans such as crabs, barnacles and post larvae of prawns in the plankton of the south-west coast of India have been followed for a period of three years from 1963. South-west monsoon period is the least productive period for zooplankton in this area. Brachyuran zoeae, post larvae of prawns and barnacle nauplii occur in the plankton throughout the year with distinct peaks for different groups. The zoeae ofUca annulipes occur in the plankton from September to May with a peak during November–December. The zoeae ofPortunus pelagicus are present in the plankton from September to June and their abundance is in February–March. The post larvae ofMetapenaeus affinis are found in the inshore plankton from November to June with the peak in March. The nauplii ofBalanus amphitrite communis occur in the plankton in all the months of the year, the peak incidence has been during November January. The zoeae ofU. annulipes are found to tolerate better the medium saline conditions. Of the ecological factors, salinity of the ambient water and the availability of planktonic food for the larvae seem to influence the seasonal fluctuations of these crustacean larvae in this locality.     

Global stability in chemostat-type plankton models with delayed nutrient recycling

 In this paper, we consider chemostat-type plankton models in which plankton feeds on a limiting nutrient and the nutrient is supplied at a constant rate and is partially recycled after the death of plankton by bacterial decomposition. We use a distributed delay to describe nutrient recycling and a discrete delay to model the planktonic growth response to nutrient uptake. When one or both delays occur, by constructing Liapunov functionals, we obtain some sufficient conditions for the global attractivity of the positive equilibrium, which can be regarded as estimates of the delays for persistence of global attractivity. Received: 9 January 1996 / Revised version: 1 October 1997     

Comparison of plankton intake by Indian carp fingerlings under different feeding conditions

The influence of different culture systems on the amount of plankton consumed by fingerlings of three carp species (Labeo rohita, Catla catla and Cirrhinus mrigala) was examined in outdoor culture tanks during a 90 day growing period. The fish were raised under two basically different feeding conditions: (a) fed with allochthonous live plankton; (b) fed with plankton grown autochthonously in the fish growing tanks fertilized with manures. Both feeding regimes were compared with control groups. It was found that the plankton intake for carp held in the live food system was significantly higher than with the manured and control systems. Related to maximum intake, maximum abundance of plankton in the live food system was a consequence of improved water quality expressed in terms of lower values of BOD and COD and higher values of DO and pH; this was conducive to fast reproduction of some of the zooplankton which constituted the major food items for the test carp, as well as to the regular exogenous introduction of live plankton. The ingestion of plankton was found to be related to carp body weight raised to the power b. The exponent b ranged from 0.29 to 0.93 during the 90-day growing period.     

The biological and physico-chemical uptake of radiocesium by particulate matter of natural origin (Baltic Sea)

The kinetics of radiocesium (¹³⁷Cs) uptake by natural suspended matter collected from coastal waters in the southern Baltic has been studied under laboratory conditions. The uptake of radiocesium from seawater by the suspended matter took place immediately after introduction of the isotope and attained equilibrium within a few hours. Summer and winter suspended matter displayed equal K_d values, indicating similar sorption characteristics of radiocesium. The amounts of radiocesium sorbed from sea water were proportional to the suspended matter concentration studied,i.e. up to 312 mg dry wt dm^–3. The relative uptake of radiocesium by live and dead plankton appeared to be the same. The desorption of radiocesium from dead plankton proceeded more rapidly and more intensively than sorption. There are no significant differences between the K_d values for plankton determined in laboratory experiments and those found for plankton populations under field conditions.