Methane seeps on an Early Jurassic dysoxic seafloor

The rhythmically bedded limestone–marl–shale succession of the Blue Lias Formation (Lias Group, Early Jurassic age) of Kilve in Somerset (SW England) preserves a suite of large conical concretions that formed around methane seeps. These are 1–2 m high, and elliptical in plan (axes 2–4 m), with an outer limestone shell forming the flanks of the cone. The cone flank is composed of micritic carbonate (20–30 cm thick), which locally includes sheets and pods of intraclasts and bioclasts. The cycle-forming limestone beds of the host strata are composed of dark grey micrite with carbon-isotope values (δ¹³C = 0.6 to 0.8‰) consistent with carbon sourced from a mixture of seawater and by sulphate reduction, and oxygen-isotope values (δ¹⁸O = − 6‰) suggesting some degree of later diagenesis. The pale grey micrite that forms the sides of the mounds includes three-dimensional ammonites and intraclasts, and thus cemented close to the sediment–water interface prior to compaction. The mound-forming carbonate is markedly isotopically light with respect to carbon, but not with respect to oxygen (δ¹³C = − 24.3 to − 26.4; δ¹⁸O = − 2 to − 3.5‰). The isotope signature indicates that cements were probably derived from a mixture of sources that included biogenic methane. The intraclasts within the limestone suggest that syn-depositional physical brecciation and mixing of cements had occurred, and thus mixing of methane rich-fluids with the overlying surface waters is likely also to have occurred. The relatively heavy oxygen-isotope values may be indicative of anaerobic oxidation of methane. The mound-bearing interval of the Blue Lias Formation is benthos-poor and comprises predominantly laminated black shales, characteristic of poor bottom water oxygenation. The largest of the mounds is however, capped with fossiliferous breccias. Thus the mounds either formed benthic islands that elevated the biota into an oxic zone or, alternatively, they may have supported a chemotrophic community. Although cold seep deposits have been documented previously they are still comparatively rare. This example is one of the oldest in Europe, and is unusual amongst described ancient seeps in preserving relief that extended above the ancient seafloor.     

Depleted methane-derived carbon in waters of Lake Baikal,Siberia

Results of hydrochemical and stable isotope measurements during the ice-breaking period on Lake Baikal indicate an apparent lack of relationship between measured δ¹³C of dissolved inorganic carbon (DIC) and phytoplankton below the trophogenic layer. While planktonic values of −31.7 to −33.5‰ are within a typical lacustrine range, the δ¹³C values of DIC turned out to be very negative, from −28.9 to −35.6‰. These isotopic values of DIC appear to be associated with oxidation of methane that accumulated during winter ice cover period. At the time of sampling, however, the observed depletion did not affect the phytoplankton/DIC fractionation relationship, because the difference between phytoplankton and DIC (−20 to −22‰ in surface waters) lies within the expected range of the fractionation coefficient. By analogy with small lakes, we explain this lack of relationship by the time lag between peak productivity and peak methane oxidation. Our interpretation of the Baikal DIC isotopic signature is consistent with methanogenesis in bottom sediments and with the known presence of widespread unstable gas hydrates and active methane seeps on the lake floor. Our findings suggest that methane is an important component of the Baikal carbon cycle, that late winter concentrations of methane in Baikal under ice may be 3–4 orders of magnitude higher than previously reported values for summer, and that the lake may be emitting a significant amount of methane to the atmosphere.     

Specific growth rate as a determinant of the carbon isotope composition of the temperate seagrass Zostera marina

The seasonal variability of specific growth rate and the carbon stable isotope ratio (δ¹³C) of leaf blades (δ¹³C_leaf) of a temperate seagrass, Zostera marina (within 10 days old) were measured simultaneously, together with the δ¹³C of dissolved inorganic carbon (δ¹³C_DIC) at three sites in the semi-closed Akkeshi estuary system, northeastern Japan, in June, September, and November 2004. The δ¹³C_leaf ranged from −16.2 to −6.3‰ and decreased from summer to winter. The simultaneous measurement of the δ¹³C_leaf, growth rate, and morphological parameters (mean leaf length and width, mean number of leaves per shoot, and sheath length) of the seagrass and δ¹³C_DIC in the surrounding water allowed us to compare directly the δ¹³C_leaf and specific growth rate of seagrass. The difference in the δ¹³C of seagrass leaves relative to the source DIC (Δδ¹³C_{leaf − DIC}) was the least negative (−11 to −7‰) in June at all three sites and became more negative (−17 to −8‰) as the specific growth rate decreased. This positive correlation between Δδ¹³C_{leaf − DIC} and specific growth rate can be used to diagnose the growth of seagrasses. Δδ¹³C_{leaf − DIC} changed by −1.7 ± 0.2‰ when the leaf specific growth rate decreased by 1% d⁻¹.     

Climatic and local effects on stalagmite δC values at Lianhua Cave, China

Carbon isotopes in speleothems may serve as indicators of vegetative change, climatic conditions, and karst processes. In many recent studies of Chinese stalagmites, however, carbon isotopes have often been neglected or underutilized in interpreting paleoenvironments. Here, we present a continuous decadal-scale δ¹³C record (819 measurements) of the mid- to late-Holocene from a precisely-dated (10 ²³⁰Th dates) aragonite stalagmite from Lianhua Cave, Hunan Province, China. Compared to coeval stalagmites from other Chinese caves, the average δ¹³C value (− 3.6‰) of stalagmite A1 is higher by ~ 2–7‰. Variations in the δ¹³C values (0.1‰ to − 6.0‰) reflect changes in both vegetative productivity and inorganic processes, which respond to climatic processes. The δ¹³C record of stalagmite A1 can be subdivided into three intervals: 1) warm–humid stage (6.6 to 3.8 ka); 2) transitional stage (3.8 to 1.6 ka); and 3) cool–arid stage (1.6 ka to present). Comparisons with other stalagmite and paleoclimatic records demonstrate that these intervals are generally consistent with changes in regional vegetation and climatic conditions.     

Trophic structure of macro- and meso-invertebrates in Japanese coniferous forest: Carbon and nitrogen stable isotopes analyses

Few studies have been published on the feeding ecology of Japanese soil fauna based on stable isotope analysis. Therefore, the present work aims to use this technique for studying the trophic structure of Japanese soil fauna at two coniferous forests. Significant differences were observed between investigated sites (Arahama and Gamo) in genus richness and abundance, while for Shannon diversity indexes the difference was non-significant. The isotopic signatures (δ¹³C and δ¹⁵N) of the invertebrates collected at Arahama ranged from 0.3 to 6.3‰ for δ¹⁵N and from −27.3 to −23.3‰ for δ¹³C. At Gamo, invertebrates δ¹³C values ranged from −26.1 to −23.5‰ and δ¹⁵N values ranged from 1.6 to 6.8‰. At both sites, invertebrates formed two distinct groups on the basis of combined C and N stable isotope ratios. The locations of these groups related to δ¹³C values. The less enriched group (δ¹³C < −25‰) and the more enriched one (δ¹³C > −25‰). The range of δ¹⁵N for the present animals exceeded two trophic levels. While, the gradual ¹⁵N enrichment within the invertebrates species may indicate the dominance of omnivory in soil food webs. The differences between sites in δ¹⁵N confirm the importance of studying the trophic structure of soil fauna locally.     

δC, δN, carbon, nitrogen and phosphorus as indicators of plant ecophysiology and organic matter pathways in Everglades deep slough, Florida, USA

Historically, the Florida Everglades was characterized by a corrugated landscape of shorter hydroperiod, elevated sawgrass (Cladium jamaicense) ridges and longer hydroperiod, deep water slough communities. Drainage and compartmentalization of the Everglades have fundamentally altered this pattern, and sawgrass ridge communities have expanded at the expense of deep water slough communities throughout much of the landscape. In this study we provide a simple isotopic and nutrient characterization of major components of the slough ecosystem to elucidate physiological and nutrient differences among species and to suggest pathways for organic matter decomposition that contribute to peat development in deep water sloughs. We examined carbon (C) and nitrogen (N) isotopes and C, N and phosphorus (P) concentrations of the floating-leaved macrophytes Nymphaea odorata and Nymphoides aquatica, the emergent macrophyte Eleocharis elongata, and the submerged species Utricularia foliosa and Utricularia purpurea, as well as soil and flocculent material from the southern Water Conservation Area 3-A. Flocculent material and soils had the highest N content (4.5 ± 0.2%) and U. foliosa and N. odorata had the highest P content (0.13 ± 0.01% to 0.12 ± 0.01%). The range for δ¹⁵N average ± SE values was 5.81 ± 0.29‰ (U. foliosa) to −1.84 ± 0.63‰ (N. odorata), while the range for δ¹³C values was −23.83 ± 0.12‰ (N. odorata) to −29.28 ± 0.34‰ (U. purpurea). Differences of up to 10‰ in C isotopic values of U. foliosa and N. odorata suggest fundamental physiological differences between these species. Along a degradation continuum, enrichment of ¹³C and ¹⁵N and extent of decomposition was negatively related to phosphorus concentrations. A two end-member ¹³C mixing model suggested that Utricularia species were the primary organic source for flocculent materials, whereas organic matter derived from root decomposition of N. odorata contributed to the progressively enriched δ¹³C values found with depth in soils. These results illustrate the fundamentally important roles of Nymphaea and Utricularia species in ecosystem dynamics of deep water sloughs.     

Stable carbon and nitrogen isotope discrimination in soft tissues of the leatherback turtle (Dermochelys coriacea): Insights for trophic studies of marine turtles

The trophic ecology of marine vertebrates has been increasingly studied via stable isotope analysis of body tissues. However, the theoretical basis for using stable isotopes to elucidate consumer–prey relationships remains poorly validated for most taxa despite numerous studies using this technique in natural systems. In this study, we measured stable carbon and stable nitrogen diet-tissue discrimination (Δ_dt) in whole blood, red blood cells, blood plasma solutes, and skin of leatherback sea turtles (Dermochelys coriacea; N = 7) maintained in captivity for up to 424 days and fed an isotopically consistent control diet with a mean C:N ratio of 2.94:1.00 and an energetic content of 20.16 ± 0.39 kJ g^− 1 Dry Mass. We used a random-effect repeated measure model to evaluate isotopic consistency among tissue samples collected on days 276, 348, and 424. Both δ¹³C and δ¹⁵N remained consistent among sampling events in all tissues (all 95% posterior intervals for the slopes of a linear model included zero), indicating that all tissues had fully integrated diet-derived stable isotope compositions. Mean tissue-specific δ¹³C ranged from − 18.30 ± 0.16‰ (plasma solutes) to − 15.54 ± 0.14‰ (skin), whereas mean δ¹⁵N was from 10.06 ± 0.22‰ (whole blood) to 11.46 ± 0.10‰ (plasma solutes). The computed Δ_dt factors for carbon ranged from − 0.58‰ (plasma solutes) to + 2.25‰ (skin), whereas Δ_dt for nitrogen was from + 1.49 (red blood cells) to + 2.85 (plasma solutes). As the only discrimination factors available for leatherback turtles, our data will be useful for future interpretations of field-derived stable isotope data for this species. The inherent variability in Δ_dt values among individuals was low, which supports the value of these data for dietary reconstructions. However, it is important to note that tissue-specific discrimination factors for leatherbacks contrast with the widely accepted values for endothermic species (0–1‰ for C, 3–5‰ for N), and are also different from values established for hard-shelled turtles. This underscores the need for species- and tissue-specific discrimination factors before interpreting trophic studies of wild animals, including marine turtles.     

Variation in δC values for the seagrass Thalassia testudinum and its relations to mangrove carbon

Carbon isotope ratios (¹³C/¹²C) were measured for the leaves of the seagrass Thalassia testudinum Banks ex König and carbonates of shells collected at the seagrass beds from seven sites along the coast of southern Florida, U.S.A. The δ¹³C values of seagrass leaves ranged from −7.3 to −16.3‰ among different study sites, with a significantly lower mean value for seagrass leaves from those sites near mangrove forests (−12.8 ± 1.1‰) than those far from mangrove forests (−8.3 ± 0.9‰; P < 0.05). Furthermore, seagrass leaves from a shallow water area had significantly lower δ¹³C values than those found in a deep water area (P < 0.01). There was no significant variation in δ¹³C values between young and mature leaves (P = 0.59) or between the tip and base of a leaf blade (P = 0.46). Carbonates of shells also showed a significantly lower mean δ¹³C value in the mangrove areas (−2.3 ± 0.6‰) than in the non-mangrove areas (0.6 ± 0.3‰; P <0.025). In addition, the δ¹³C values of seagrass leaves were significantly correlated with those of shell carbonates (δ¹³C seagrass leaf = −9.1 + 1.3δ¹³C shell carbonate (R² = 0.83, P < 0.01)). These results indicated that the input of carbon dioxide from the mineralization of mangrove detritus caused the variation in carbon isotope ratios of seagrass leaves among different sites in this study.     

Mangrove ecosystem changes during the Holocene at Spanish Lookout Cay, Belize

Mangroves are halophytic plants living at the land–sea interface and are therefore natural trackers of sea-level. Multiple proxies of a continuous (8 m) mangrove peat core (BT-79) from Spanish Lookout Cay, Belize illustrate mangrove ecosystem changes during the Holocene. Radiocarbon measurements show this site was colonized by mangroves ~ 8000 cal. yrs BP, with a significant decrease in the peat accumulation rate from ~ 6000 to 1000 cal. yrs BP. Stratigraphic characteristics of this peat core such as bulk density, magnetic susceptibility, and loss on ignition show relative uniformity, inferring an uninterrupted mangrove ecosystem during a majority of the Holocene. This is supported by pollen data from BT-79 that show that the site has been consistently dominated by Rhizophora mangle (red mangrove), with Avicennia germinans (black mangrove) and Laguncularia racemosa (white mangrove) present as well. Subfossil R. mangle leaves are used for stable nitrogen, carbon, and oxygen isotope (δ¹⁵N, δ¹³C, and δ¹⁸O) analyses. δ¹⁵N and δ¹³C values provide a proxy of this plant's past physiology and stand structure showing that dwarf (δ¹⁵N < − 3‰) and tall (δ¹³C < − 27‰) R. mangle stands were previously present at the site, which are a result of nutrient limitations that we equate with seawater inundation. δ¹⁸O values show differences in source water of R. mangle, with higher values attributed to the source water being composed of a greater proportion of seawater relative to precipitation. A decrease in inundation at the site is shown by lower δ¹⁸O values (< 19‰) from ~ 7000 to ~ 1000 cal. yrs BP that covary with the decreased sedimentation rate. Existing Caribbean sea-level data do not show evidence of a decrease in the rate of relative sea-level rise or fluctuations that we take to be the major causes of environmental changes at site BT-79.     

Organic matter rain rates, oxygen availability, and vital effects from benthic foraminiferal δC in the historic Skagerrak, North Sea

The sediment cores 225514 and 225510 were recovered from 420 and 285 m water depth, respectively. They were investigated for their benthic foraminiferal δ¹³C during the last 500 years. Both cores were recovered from the southern flank of the Skagerrak. The δ¹³C values of Uvigerina mediterranea and other shallow infaunal species in both cores indicate that organic matter rain rates to the seafloor varied around a mean value until approximately AD 1950 after which they increased. This increase might result from changes in the North Atlantic Current System and a co-occurring persistently high North Atlantic Oscillation index state in the 1980s to 1990s, rather than from anthropogenic eutrophication. Using δ¹³C mean values of multiple species, we reconstruct δ¹³C gradients of dissolved inorganic carbon (DIC) within pore waters for the time periods AD 1500 to 1950 and AD 1950 to 2000. The calculated δ¹³C_DIC ranges, interpreted as indicating total organic matter remineralization due to respiration, are generally bigger in Core 225514 than in Core 225510. Since mean δ¹³C values of U. mediterranea suggest that organic matter rain rates were similar at both locations, differences in total organic matter remineralization are attributed to differing oxygen availability. However, oxygen concentrations in the overlying bottom water masses are not likely to have differed significantly. Thus, we suggest that organic matter remineralization was controlled by oxygen availability within the sediments, reflecting strong differences in sedimentation rates at the two investigated core sites. Based on the assumptions that tests of benthic foraminiferal species inhabiting the same microhabitat depth should show equal δ¹³C values unless they are affected by vital effects and that Globobulimina turgida records pore water δ¹³C_DIC, we estimate microhabitat-corrected vital effects for several species with respect to G. turgida: > 0.7‰ for Cassidulina laevigata, > 1.3‰ for Hyalinea balthica, and > 0.7‰ for Melonis barleeanus. Melonis zaandami seems to closely record pore water δ¹³C_DIC.     

Comparison of stable-carbon isotope composition in the growth rings of Isorberlinia doka, Daniella oliveri, and Tamarindus indica and West African climate

Inter-ring variations in stable-carbon isotope composition of cellulose in Daniella oliveri, Isoberlinia doka, and Tamarindus indica stumps were analyzed for nine trees in the Soudan-Sahel zone of West Africa. This pioneer isotopic study is a contribution to on-going efforts to evaluate the feasibility of extracting proxy climatic records from tree-rings in this area. Our aim is to investigate trends in individual floating δ¹³C time series to assess if patterns in variability within and between rings are consistent with those in other climatically sensitive tree-ring δ¹³C series. Samples were collected primarily from tree stumps but kill dates were unknown. Tree age was estimated from stump condition and shoot regrowth. This approach, combined with low sample replication, hindered the establishment of absolute dates. Nevertheless, δ¹³C and discrimination (Δ¹³C), absolute values and variability in the time series are similar to those often seen in tree-rings. Average δ¹³C values for individual series range from −25.90‰ to −23.72‰ and average Δ¹³C values from 16.56‰ to 18.99‰. It is well known that seasonal rainfall is inversely related to the δ¹³C in growth-season-dry environments and positively covaries with Δ. We investigate the possibility of using this relationship to temporally anchor the time series and to identify missing and false rings in wood segments with indistinct growth. The variability in these time series is consistent with expected patterns and shows promise for facilitating the development of stable carbon isotope tree-ring chronologies for West Africa.     

Foraminiferal oxygen and carbon isotopes during the last 34 kyr off northern Japan, northwestern Pacific

Oxygen and carbon isotopes of foraminifera were analyzed in core PC4, water depth 1366 m, off northern Japan, near the east side of the Tsugaru Strait (130 m depth) between the open northwestern Pacific Ocean and the Japan Sea. At present, the site is at the confluence of the Tsugaru Warm Current which flows eastwards out of the Sea of Japan through the Tsugaru Strait, the subarctic Oyashio Current and the subtropic Kuroshio Current. During the Last Glacial Maximum (LGM), the Oyashio Current penetrated further to the South and outflow from the Japan Sea was restricted by glacio-eustatic sea level lowering.The isotopic values of the planktic foraminifer Neogloboquadrina pachyderma (sinistral) and the benthic foraminifer Uvigerina akitaensis reflect rapid millennial-scale paleoceanographic changes between 34 and 6 ka. Hydrographic changes during deglaciation were related to events at high northern latitudes, but Holocene hydrographic changes were dominated by local effects, such as the development of the outflow of the Tsugaru Warm Current. High values of planktic δ¹⁸O during the LGM reflect the southward advance of the Oyashio Current. These values decreased by 0.3‰ from 19.4 to 18.9 ka, then increased by 0.5‰ at 18 ka, with highest values between 17.5 and 15 ka. The δ¹⁸O oscillations between 19.4 and 15 ka may reflect millennial-scale warm–cold oscillations during Heinrich event 1. Planktic microfossil data indicate that cold Oyashio waters flowed from the northwestern Pacific into the Japan Sea via the Tsugaru Strait between 17 and 16 ka, consistent with the occurrence of the highest planktic δ¹⁸O values in core PC4. Planktic δ¹⁸O values rapidly decreased by 0.9‰ at 15 ka, possibly reflecting the effects of both a rapid increase in fresh water flux and rising temperatures in the subarctic North Pacific. During the Younger Dryas, cold event planktic δ¹⁸O values increased by 0.5‰, followed by a gradual decrease by 1‰ from the early to middle Holocene, reflecting a gradual increase in eastward outflow via the Tsugaru Strait with sea level rise. Both planktic and benthic foraminiferal δ¹³C values oscillated between 34 and 10 ka, at relatively large amplitudes (about 0.5‰), then remained relatively stable during the last 10 kyr. Several negative planktic and benthic ( − 0.7‰) δ¹³C excursions were present in sediment dated between the precipitation of secondary carbonates during episodic methane release possibly associated with methane release from continental margin sediments.     

Diet and physiological responses of Spondyliosoma cantharus (Linnaeus, 1758) to the Caulerpa racemosa var. cylindracea invasion

Marine invasions are a worldwide problem that involves changes in communities and the acclimation of organisms to them. The invasive Chlorophyte Caulerpa racemosa var. cylindracea is widespread in the Mediterranean and colonises large areas from 0 to 70 m in depth. The omnivorous fish Spondyliosoma cantharus presents a high frequency of occurrence of C. racemosa in the stomach contents at invaded areas (76.3%) while no presence of C. racemosa was detected in control areas. The isotopic composition of muscle differed significantly between invaded and non-invaded sites for δ¹³C (− 16.67‰ ± 0.09 and − 17.67‰ ± 0.08, respectively), δ¹⁵N (10.22‰ ± 0.22 and 9.32‰ ± 0.18, respectively) and the C:N ratio (2.01 ± 0.0002 and 1.96 ± 0.009, respectively). Despite the high frequency of occurrence of C. racemosa in the stomach contents of S. cantharus and its important contribution to the δ¹³C source (20.7% ± 16.2), the contribution of C. racemosa to the δ¹⁵N in S. cantharus food sources was very low (6.6% ± 5.8). Other invertebrate prey such as decapods and polychaetes were more important contributors to the δ¹⁵N source at both invaded and non-invaded sites. Activation of enzymatic pathways (catalase, superoxide dismutase, glutathione-s-tranferase, 7-ethoxy resorufin O-de-ethylase) but not a significant increase in lipid peroxidation MDA (0.49 ± 0.01 nmol/mg prot at non-invaded and 0.53 ± 0.01 nmol/mg prot at invaded sites) was observed in S. cantharus individuals living in C. racemosa-invaded sites compared with control specimens. The low δ¹⁵N contribution values of C. racemosa by S. cantharus together with the toxicity demonstrated by the activation of the antioxidant defences and the important contribution of invertebrate prey to the δ¹⁵N could mean that the ingestion of C. racemosa by S. cantharus might be unintentional during the predation of invertebrate preys living underneath the entanglement of the C. racemosa fronds and stolons mats.     

Fatty acid composition of aquatic insect larvae Stictochironomus pictulus (Diptera: Chironomidae): evidence of feeding upon methanotrophic bacteria

Larvae of the chironomid Stictochironomus pictulus were collected from Lake Biwa, central Japan. Both the fatty acid composition of the total lipid fraction and the carbon stable isotope ratios of whole larvae were determined. Larvae showed δ¹³C values of −57.4‰ to −62.4‰, similar to the values of methane recorded from the lake sediments. A high level of monounsaturated fatty acids (MUFAs; approximately 50% of total fatty acids) and an extremely low level of n-3 series polyunsaturated fatty acids (PUFAs) in the total lipids of S. pictulus indicated a predominantly bacterial nutrition for this species. Moreover, chironomid tissues contained large amounts of the Type I methanotroph group-specific fatty acid, 16:1(n-8) (approximately 8% of total fatty acids). This is the first time such a fatty acid biomarker has been described from freshwater invertebrates. The data suggest that S. pictulus larvae directly feed upon methanotrophic bacteria.     

Stable carbon isotope variations in surface bloom scum and subsurface seston among shallow eutrophic lakes

Carbon stable isotope analysis of surface bloom scum and subsurface seston samples was conducted in shallow eutrophic lakes in China during warm seasons from 2003 to 2004. δ¹³C values of bloom scum were always higher (averaged 5‰) than those of seston in this study, and the possible reasons were attributed to (i) direct use of atmospheric CO₂ at the air–water interface, (ii) decrease in ¹³C fractionation due to higher carbon fixation, (iii) active CO₂ transport, and/or (iv) HCO₃⁻ accumulation. Negative correlation between δ¹³C_scum − δ¹³C_seston and pH in the test lakes indicated that phytoplankton at the subsurface water column increased isotopic enrichment under the carbon limitation along with the increase of pH, which might in turn decreased the differences in δ¹³C between the subsurface seston and the surface scums. Significant positive correlations of seston δ¹³C with total concentrations of nitrogen and phosphorus in water column suggested that the increase in δ¹³C of seston with trophic state was depending on nutrient (N or P, or both) supply. Our study showed that δ¹³C of phytoplankton was indicative of carbon utilization, primary productivity, and nutrient supply among the eutrophic lakes.     

Long-term exposure of the freshwater shrimp Macrobrachium olfersii to elevated salinity: Effects on gill (Na,K)-ATPase α-subunit expression and K-phosphatase activity

The kinetic properties of a microsomal gill (Na⁺,K⁺)-ATPase from the freshwater shrimp, Macrobrachium olfersii, acclimated to 21‰ salinity for 10 days were investigated using the substrate p-nitrophenylphosphate. The enzyme hydrolyzed this substrate obeying cooperative kinetics at a rate of 123.6 ± 4.9 U mg^− 1 and K_0.5 = 1.31 ± 0.05 mmol L^− 1. Stimulation of K⁺-phosphatase activity by magnesium (V_max = 125.3 ± 7.5 U mg^− 1; K_0.5 = 2.09 ± 0.06 mmol L^− 1), potassium (V_max = 134.2 ± 6.7 U mg^− 1; K_0.5 = 1.33 ± 0.06 mmol L^− 1) and ammonium ions (V_max = 130.1 ± 5.9 U mg^− 1; K_0.5 = 11.4 ± 0.5 mmol L^− 1) was also cooperative. While orthovanadate abolished p-nitrophenylphosphatase activity, ouabain inhibition reached 80% (K_I = 304.9 ± 18.3 μmol L^− 1). The kinetic parameters estimated differ significantly from those for freshwater-acclimated shrimps, suggesting expression of different isoenzymes during salinity adaptation. Despite the ≈2-fold reduction in K⁺-phosphatase specific activity, Western blotting analysis revealed similar α-subunit expression in gill tissue from shrimps acclimated to 21‰ salinity or fresh water, although expression of phosphate-hydrolyzing enzymes other than (Na⁺,K⁺)-ATPase was stimulated by high salinity acclimation.     

Resource use by salmonids in riverine,lacustrine and marine environments: Evidence from stable isotope analysis

Synopsis We measured stable isotope ratios (δ¹³C and δ¹⁵N) of invertebrates, Atlantic salmon, Salmo salar, and brook trout, Salvelinus fontinalis, in three distinct freshwater environments (headwater tributary, ultra-oligotrophic lake, and main-stem river) in the Western Brook system, Newfoundland, Canada. Large differences in the stable carbon signatures of invertebrates allowed the identification of organic matter assimilation from each environment by resident parr and migrating smolts. Brook trout captured in the headwater tributary in June had a carbon signature characteristic of the tributary, while those collected in August had enriched ¹³C (maximum = −15.6‰) and ¹⁵N (maximum = 12.8‰) values. These enriched carbon and nitrogen signatures were indicative of foraging at sea. There was a low correlation between δ¹³C and δ¹⁵N (r² = 0.198) for individual fish that was likely due to the confounding influence of trout feeding in the lake and the lower main-stem of the river, where δ¹³C of food sources was high but δ¹⁵N was low. Smolts emigrating from Western Brook Pond where they had been foraging (based on lacustrine carbon signatures) were significantly larger than those emigrating from a nursery brook and the main river in the same basin, despite having the same median age. These results suggest better growth opportunities in the lake environment. Trout fork length was positively correlated with δ¹³C and δ¹⁵N, demonstrating that larger individuals had been feeding outside the brook. These results support previous studies that found increased growth potential for salmonids in lacustrine and marine environments, and further, indicate possible adaptive advantages for salmonid movement away from natal brooks.     

Carbon and oxygen isotopic disequilibria of recent deep-sea benthic foraminifera

The carbon and oxygen isotopic compositions of 149 samples of benthic foraminifera from deep-sea core tops indicate that none of the nine species studied secrete calcium carbonate in isotopic equilibrium with ambient bottom water. Uvigerina, Pyrgo murrhina, and Oridorsalis tener are the closest to ¹⁸O equilibrium (with average deviations about −0.4‰), while Planulina wuellerstorfi and P. murrhina are the closest to ¹³C equilibrium (with average deviations about −1‰). P. wuellerstorfi shows the most systematic relationship between δ ¹³C and bottom water apparent oxygen utilization. The intraspecific variabilities in δ ¹⁸O and δ ¹³C suggest that estimates of bottom water paleotemperatures can be made to a precision of ± 0.7°C, while estimates of past apparent oxygen utilization (AOU) can be made to ± 35 μmol/kg. Based on intraspecific comparisons of the Recent samples with fossils, no temporal changes in the degree of either ¹⁸O or ¹³C disequilibrium have been detected for Planulina wuellerstorfi, Uvigerina, Oridorsalis tener and Globocassidulina subglobosa.     

Isotopic composition and morphology of living Globorotalia scitula: a new proxy of sub-intermediate ocean carbonate chemistry?

Abundance, isotopic composition and morphological imprints of the planktonic foraminifera Globorotalia scitula (Brady) were closely examined for possible use as a novel reconstruction tool of chemical environments in sub-intermediate depth seawater in the past. Based on the MOCNES plankton tow observation of dwelling depths of G. scitula and the isotopic compositions together with hydrochemistry data, the empirical relations between isotopic disequilibria in carbon (Δδ¹³C=δ¹³C_{G. scitula}−δ¹³C_DIC) and oxygen (Δδ¹⁸O=δ¹⁸O_{G. scitula}−δ¹⁸O_w) isotopes in the carbonate tests and the seawater δ¹⁸O and δ¹³C of dissolved inorganic carbon (DIC), respectively, are introduced. The morphological information such as pore density and porosity is also examined for significant relations to carbonate chemistry. Shell porosity is strongly correlated saturation state of calcite. The dissolution of living G. scitula tests may promote the observed isotopic differences as well as the increases in porosity. Δδ¹⁸O of G. scitula is found effectively to be linear function of both water temperature and calcite saturation state (Ω), and thereby temperature equation for G. scitula is provided, while Δδ¹³C of G. scitula is a linear function of only calcite saturation state.The equation was validated by using Globorotalia scitula collected by a sediment trap in intermediate water depths. Satisfactory agreements were found between observed and calculated Δδ¹⁸O from the empirical equations based on temperature and hydrochemistry data at sediment trap deployment site, indicating that the equation may be useful in paleo-environmental reconstruction of sub-intermediate water. The sediment trap observation further suggests that the abundance of G. scitula does not necessarily correspond to surface water productivity and to POC flux, but instead, it correlates well with the supply of fine organic matter, which appears to be a result of water convection. Thus, G. scitula may be an unambiguous and excellent paleo-environmental recorder for carbonate chemistry and for fine organic matter transport to the depths, if isotopic and morphological observations are combined.     

In Vitro Study of Lipid Biosynthesis in an Anaerobically Methane-Oxidizing Microbial Mat

The anaerobic oxidation of methane (AOM) is a key process in the global methane cycle, and the majority of methane formed in marine sediments is oxidized in this way. Here we present results of an in vitro ¹³CH₄ labeling study (δ¹³CH₄, ~5,400‰) in which microorganisms that perform AOM in a microbial mat from the Black Sea were used. During 316 days of incubation, the ¹³C uptake into the mat biomass increased steadily, and there were remarkable differences for individual bacterial and archaeal lipid compounds. The greatest shifts were observed for bacterial fatty acids (e.g., hexadec-11-enoic acid [16:1Δ11]; difference between the δ¹³C at the start and the end of the experiment [Δδ¹³C_start-end], ~160‰). In contrast, bacterial glycerol diethers exhibited only slight changes in δ¹³C (Δδ¹³C_start-end, ~10‰). Differences were also found for individual archaeal lipids. Relatively high uptake of methane-derived carbon was observed for archaeol (Δδ¹³C_start-end, ~25‰), a monounsaturated archaeol, and biphytanes, whereas for sn-2-hydroxyarchaeol there was considerably less change in the δ¹³C (Δδ¹³C_start-end, ~2‰). Moreover, an increase in the uptake of ¹³C for compounds with a higher number of double bonds within a suite of polyunsaturated 2,6,10,15,19-pentamethyleicosenes indicated that in methanotrophic archaea there is a biosynthetic pathway similar to that proposed for methanogenic archaea. The presence of group-specific biomarkers (for ANME-1 and ANME-2 associations) and the observation that there were differences in ¹³C uptake into specific lipid compounds confirmed that multiple phylogenetically distinct microorganisms participate to various extents in biomass formation linked to AOM. However, the greater ¹³C uptake into the lipids of the sulfate-reducing bacteria (SRB) than into the lipids of archaea supports the hypothesis that there is autotrophic growth of SRB on small methane-derived carbon compounds supplied by the methane oxidizers.