CRISPR-Cas系统在植物基因组编辑中的研究进展

基因组定点编辑技术是研究基因功能和生物体改造的重要工具。CRISPR-Cas(Clustered regularly interspaced short palindromic repeats and CRISPR-associated proteins)系统是近年来发展的一种新型基因组编辑技术,该技术通过一段向导RNA和配套的核酸酶就可对特定的基因组序列进行定点编辑,具有简单高效、应用广泛的特点,受到了生物学家的广泛关注。本文着重介绍CRISPR-Cas系统在植物中的研究进展,包括CRISPR-Cas9系统在植物中的应用与完善、扩大基因组编辑范围的研究、Cas9切口酶和失活酶的拓展、特异性单碱基突变编辑系统的研究、无外源DNA污染的植物基因编辑技术的发展以及基因组编辑技术在作物育种上的应用等方面。同时也提出了还需解决的问题,并展望了基因组编辑系统在作物育种中的应用前景,为开展这一领域的研究工作提供参考。     

Some Aspects of the Pollination Ecology of Wild Leek, Allium tricoccum Ait.

Abstract Some aspects of the pollination ecology of a wild leek ( Allium tricoccum Ait.) population were studied in Gatineau Park, Southern Québec, Canada. Self-compatibility was determined by a pollinator exclusion experiment. Pollinator limitation of seed production was tested by comparing naturally pollinated plants with hand cross-pollinated plants. The insects observed on the umbels were collected for identification. Wild leek was found to be self-compatible. Seed production does not seem to be limited by pollinator activity. An important year to year variability of pollinator activity was observed according to the flowering intensity within the population.     

Anaerobic digestion and co-digestion processes of vegetable and fruit residues: process and microbial ecology

This study evaluated the feasibility of methane production from fruit and vegetable waste (FVW) obtained from the central food distribution market in Mexico City using an anaerobic digestion (AD) process. Batch systems showed that pH control and nitrogen addition had significant effects on biogas production, methane yield, and volatile solids (VS) removal from the FVW (0.42 m(biogas)(3)/kg VS, 50%, and 80%, respectively). Co-digestion of the FVW with meat residues (MR) enhanced the process performance and was also evaluated in a 30 L AD system. When the system reached stable operation, its methane yield was 0.25 (m(3)/kg TS), and the removal of the organic matter measured as the total chemical demand (tCOD) was 65%. The microbial population (general Bacteria and Archaea) in the 30 L system was also determined and characterized and was closely correlated with its potential function in the AD system.     

南充金腰燕、家燕繁殖生态比较及易卵易雏实验

2004年3～10月对四川南充地区家燕、金腰燕的繁殖生态进行了观察,比较了其繁殖生态习性及雏鸟的生长特性,进行了家燕、金腰燕之间的易卵易雏实验.结果表明,家燕于2月中旬迁入南充,9月中旬开始迁离;金腰燕迁来较家燕晚,2月底～3月初迁入,9月中旬迁离.家燕于4月初产卵;金腰燕在4月上旬产卵.金腰燕卵的各项量衡度均较家燕的大,出壳时金腰燕雏鸟体重也比家燕雏鸟稍重.金腰燕雏鸟的体长、翅长、尾长、外部器官及体重的增长较家燕的快.而易卵、易雏的金腰燕雏鸟增长曲线则在金腰燕和家燕的雏鸟之间.易卵易雏的实验表明,在孵卵和育雏过程中,金腰燕与家燕之间彼此互换卵可以接受,易换雏鸟也可以接受.     

Sparing land for nature: exploring the potential impact of changes in agricultural yield on the area needed for crop production

How can rapidly growing food demands be met with least adverse impact on nature? Two very different sorts of suggestions predominate in the literature: wildlife‐friendly farming, whereby on‐farm practices are made as benign to wildlife as possible (at the potential cost of decreasing yields); and land‐sparing, in which farm yields are increased and pressure to convert land for agriculture thereby reduced (at the potential cost of decreasing wildlife populations on farmland). This paper is about one important aspect of the land‐sparing idea – the sensitivity of future requirements for cropland to plausible variation in yield increases, relative to other variables. Focusing on the 23 most energetically important food crops, we use data from the Food and Agriculture Organisation (FAO) and the United Nations Population Division (UNPD) to project plausible values for 2050 for population size, diet, yield, and trade, and then look at their effect on the area needed to meet demand for the 23 crops, for the developing and developed worlds in turn. Our calculations suggest that across developing countries, the area under those crops will need to increase very considerably by 2050 (by 23% under intermediate projections), and that plausible variation in average yield has as much bearing on the extent of that expansion as does variation in population size or per capita consumption; future cropland area varies far less under foreseeable variation in the net import of food from the rest of the world. By contrast, cropland area in developed countries is likely to decrease slightly by 2050 (by 4% under intermediate projections for those 23 crops), and will be less sensitive to variation in population growth, diet, yield, or trade. Other contentious aspects of the land‐sparing idea require further scrutiny, but these results confirm its potential significance and suggest that conservationists should be as concerned about future agricultural yields as they are about population growth and rising per capita consumption.     

Cooperative breeding in birds: the role of ecology

Theory predicts that cooperative breeding should only occurin species in which certain individuals are constrained frombreeding independently by some peculiarity of the species' ecology.Here, we use comparative methods to examine the role of variationin ecology in explaining differences between taxa in the frequencyof cooperative breeding. We address three questions. First,does the frequency of cooperative breeding vary at just one phylogeneticlevel, or across several levels? Second, are differences inthe frequency of cooperative breeding among closely-relatedspecies correlated with ecology? Last, are ecological differencesbetween ancient lineages important in predisposing certain lineagesto cooperative breeding? We find that variation in the frequencyof cooperative breeding occurs across all phylogenetic levels,with 40% among families and 60% within families. Also, variationin the frequency of cooperative breeding between closely related speciesis associated with ecological differences. However, differencesin the frequency of cooperative breeding among more ancientlineages are not correlated with differences in ecology. Together,our results suggest that cooperative breeding is not due toany single factor, but is a two step-process: life-history predispositionand ecological facilitation. Low annual mortality predisposescertain lineages to cooperative breeding. Subsequently, changesin ecology facilitate the evolution of cooperative breedingwithin these predisposed lineages. The key ecological changesappear to be sedentariness and living in a relatively invariableand warm climate. Thus, although ecological variation is notthe most important factor in predisposing lineages to cooperativebreeding, it is important in determining exactly which speciesor populations in a predisposed lineage will adopt cooperativebreeding.     

Intensification through diversified resource use: The human ecology of a successful agricultural industry in Indonesian Borneo

The success of an agricultural industry in commercial duck egg production in the swamplands of South Kalimantan (Borneo) is examined through the utilization of a human ecology framework. Seasonality of resource availability and human population growth are identified as two major constraints to production faced by farmers. Population increases in the urban sectors of southeastern Borneo also present economic opportunities for farmers because of the growing demand for poultry products. Farmers have responded by developing an intensification strategy in egg production based on the use of diversified resources for duck feed. The long-term consequences of these and other innovations in duck farming are discussed; and diversity-stability theory is examined for its applicability to this case of agricultural development and for rural development theory and practice.The research that this paper is based upon was funded by the National Science Foundation under Grant No. BNS-8107626, Cathay Pacific Airlines, and The Graduate School, Rutgers University, New Brunswick, New jersey. In Indonesia, the research was sponsored by Universitas Lambung Mangkurat, Banjarmasin, and Lembaga Ilmu Pengetahuan Indonesia (LIPI), Jakarta.     

Pollination ecology of Isoglossa woodii,a long‐lived,synchronously monocarpic herb from coastal forests in South Africa

Synchronous monocarpy in long‐lived plants is often associated with pollination by wind, in part because infrequent mass flowering may satiate pollinators. Selfing in synchronous monocarps may provide reproductive assurance but conflict with the benefits of outcrossing, a key evolutionary driver of synchrony. We predicted that animal‐pollinated species with synchronous flowering would have unspecialised flowers and attract abundant generalised pollinators, but predictions for selfing and outcrossing frequencies were not obvious. We examined the pollination biology of Isoglossa woodii (Acanthaceae), an insect‐pollinated, monocarpic herb that flowers synchronously at 4–7‐year intervals. The most frequent visitor to I. woodii flowers was the African honeybee, Apis mellifera adansonii. Hand‐pollination failed to enhance seed production, indicating that the pollinators were not saturated. No seed was set in the absence of pollinators. Seed set was similar among selfed and outcrossed flowers, demonstrating a geitonogamous mixed‐mating strategy with no direct evidence of preferential outcrossing. Flowers contained four ovules, but most fruits only developed one seed, raising the possibility that preferential outcrossing occurs by post‐pollination processes. We argue that a number of the theoretical concerns about geitonogamous selfing as a form of reproductive assurance do not apply to a long‐lived synchronous monocarp such as I. woodii.     

Breeding systems in two species of the genus Helleborus (Ranunculaceae)

ABSTRACT

The results of various types of manual and free pollination are reported in Helleborus bocconei and Helleborus foetidus, two sympatric species of the understorey of submediterranean woods that flower in January–March and are pollinated by bumble-bees of the genus Bombus. Both species were found to be partially self-compatible even if at different rates; geitonogamy seems to be more frequent in H. foetidus and spontaneous self-pollination does not usually occur for morphological reasons, and the species are not apomictic. Efficiency in seed production after free pollination was very high indicating that in spite of harsh climatic condition, there were no limitations imposed by pollen or pollinators.