Buoyant density of Escherichia coli is determined solely by the osmolarity of the culture medium

In previous studies, we had shown that the buoyant density ofEscherichia coli is determined by the osmolarity of the growth medium by varying the osmolarity of the medium with NaCl or sucrose. However, the buoyant density of the cells always exceeded that of the growth medium. Here we determined the effect of medium with a buoyant density greater than the expected buoyant density of cells by adding Nycodenz to Luria broth. Percoll gradients of cells were analyzed by laser light scattering. The buoyant density for 125- and 375-mOsM-grown cells was 0.002 g/ml and 0.003 g/ml more, respectively, for cells grown in the presence of Nycodenz than those grown without Nycodenz, while the buoyant density of 250-mOsM-grown cells was 0.005 g/ml less for cells grown in the presence of Nycodenz than those grown without Nycodenz. Cells grown in 500-mOsM medium with or without Nycodenz had the same buoyant density. the buoyant density of cultures grown in defined medium was the same as those grown in rich medium, with only the medium osmolarity correlating to buoyant density. We conclude from these experiments that neither buoyant density nor chemical make-up of the medium determines the buoyant density of cells grown in that medium. Only the medium osmolarity determines cell buoyant density, suggesting thatE. coli has no mechanisms to sense buoyant density.     

Flotation characteristics of cyanobacterium Anabaena flos-aquae for gas vesicle production

Cyanobacterium Anabaena flos-aquae was cultivated in photobioreactors for production of intracellular gas vesicles (GVs), as potential oxygen microcarriers. Natural flotation of the buoyant culture was investigated as a potential means of cell harvesting, because filtration and centrifugation tended to destroy the vesicles. Best flotation was found with actively growing culture and when conducted in the dark. The flotation-related cell properties, including the specific GV content, vesicle-collapsed filament density, and intracellular carbohydrate content, were measured to understand the phenomena. During the batch culture, the specific GV content remained relatively constant at 370 microL/(g dry cells) but the filament density (ranging 1.02 to 1.08 g/cm3) showed a decrease-then-increase profile. The increase began when the growth slowed down because of the reduced light availability at high cell concentrations. The dark flotation was studied with both actively growing (mu approximately 0.2 day-1) and stationary-phase cultures. The specific GV content of the stationary-phase culture remained relatively constant while that of the growing culture increased slightly. The intracellular carbohydrate content of the growing culture decreased much faster and more significantly, from 57 to 10 mg/(g dry cells) in 相似文献   

Molecular fractionation of starch by density-gradient ultracentrifugation

Amylose and amylopectin in corn and potato starches were fractionated by centrifugation at 124,000g for 3-72 h at 40 degrees C in a gradient media, Nycodenz, based on their sedimentation rate differences. The fractions were collected from a centrifuge tube, and then analyzed by the phenol-sulfuric acid method and iodine-binding test. Amylopectin, a large and highly branched starch molecule, migrated faster than amylose and quickly reached its isopycnic point with a buoyant density of about 1.25 g/mL, exhibiting a sharp and stable carbohydrate peak. Amylose, which is a relatively small and linear molecule, however, migrated slowly in a broad density range and continued moving to higher density regions, eventually overlapping with amylopectin peak as the centrifugation continued. This could indicate that the buoyant density of amylose is similar to that of amylopectin. Under centrifugal conditions of 3 h and 124,000g, amylose and amylopectin molecules were clearly separated, and the presence of intermediate starch molecules (11.5 and 7.7% for corn and potato starch, respectively) was also observed between amylose and amylopectin fractions. The amylose content of corn and potato starches was 22.6 and 21.1%, respectively, based on the total carbohydrate analysis after the ultracentrifugation for 3 h. In alkaline gradients (pH 11 or 12.5), the sedimentation rate of starch molecules and the buoyant density of amylopectin were reduced, possibly due to the structural changes induced by alkali.     

Seasonal changes in the amount of carbohydrate and crude protein in the rhizome ofMiscanthus sacchariflorus

In the herbaceous perennials, seasonal changes in the amount of reserve substances play an important role in the production processes of whole plants. Mutohet al. (1968) indirectly estimated the amount of reserve substances stored in the rhizome ofMiscanthus sacchariflorus by measuring the bulk density of the rhizome, and found aarked seasonal changes. In the present study seasonal changes in the carbohydrate and crude protein content of the rhizome were determined and the results obtained were compared with the changes in the total amount of reserve substances estimated by means of changes in the bulk density. A good parallel seasonal relationship was confirmed between the amount of consumable carbohydrate determined chemically and the quantity of reserve substances estimated from the changes in bulk density. The total yields of carbohydrate and crude protein were ca. 75% of the available reserve substances estimated from the changes of bulk density for the old rhizomes and ca. 65% for the new rhizomes in the middle of December.     

Water and ion balance in rat thymocytes under apoptosis induced with dexamethasone or etoposide. Ion-osmotic model of cell volume decrease

Cell ion and water balance was studied with respect to analysis of the osmotic model of apoptotic volume decrease (AVD) in rat thymocytes under dexamethasone (1 microM, 4-6 h) or etoposide (50 microM, 5 h) treatment. Intracellular water content was determined by measurement of cell buoyant density in continuous Percoll gradient, while intracellular potassium and sodium contents were determined by flame emission analysis. Apoptosis was verified by an increase in cell buoyant density, fluorescence of cells stained with Acridine orange and Ethidium bromide (flow cytometry), by changes in the cell cycle and the appearance of sub-diploid peak in the DNA histogram (flow cytometry), and by a decrease in cell size examined with light microscope. A separate fraction of dense cells with reduced size was found to appear after dexamethasone or etoposide treatment. This fraction was considered as apoptotic. An increase in buoyant density of apoptotic cells corresponded to a decrease in cell water content. In apoptotic cells vs. cells with normal buoyant density, the intracellular potassium content was lower, but sodium content was higher. The sum of potassium and sodium contents was lower in apoptotic cells. Taken into account the loss of anions, associated with the loss of cations, the bulk decrease in ions content has been sufficient to be accounted for cell volume decrease on the basis of the ion-osmotic model.     

Seasonal changes in shoot regrowth potential in Calamagrostis canadensis

Summary A series of laboratory experiments was conducted to examine seasonal change in shoot regrowth potential following disturbance in Calamagrostis canadensis. On several dates during the 1988 and 1989 growing seasons, soil cores were collected from field sites dominated by this grass. Shoot regrowth from cores after clipping at the soil surface was monitored under dark or light laboratory conditions at 20°C. seasonal changes in field concentrations of total nonstructural carbohydrate and nitrogen in rhizomes largely accounted for the observed seasonal change in etiolated regrowth potential of shoots in laboratory experiments. In contrast, shoot regrowth potential in the light showed a very different seasonal pattern. The ratio of shoot biomass regrowth 20 d after clipping in the light versus dark treatment showed a gradual seasonal decrease from 12:1 in the early May experiment to near 1:1 in the September experiment. However, the rate of photosynthesis of regrowing shoots in the light was highest in experiments conducted late in the growing season. This may indicate a strong seasonal decrease in the proportion of current photosynthate of regrowing shoots that is allocated to new shoot growth. Alternatively, mobilization of rhizome carbohydrate reserves for shoot regrowth may have been inhibited during the re-establishment of photosynthesis in the light treatment. Either mechanism would explain why shoot regrowth in the light is poorly correlated with levels of belowground carbohydrate reserves, even under controlled laboratory conditions.     

Density comparisons of heavy chains of membrane and secreted immunoglobulins of mouse.

In order to explore structural differences between membrane and secreted immunoglobulins the buoyant densities of mouse immunoglobulin (Ig) heavy (H) chains were compared by isopycnic centrifugation in CsCl containing guanidine hydrochloride. The buoyant densities, under denaturing conditions, of mouse myeloma protein MOPC 21 IgG, MOPC 315 IgA and MOPC 104E IgM H chains were consistent with their carbohydrate contents. Mouse membrane IgM and MOPC 104E-secreted IgM H chains were of equal density. The buoyant densities of MOPC 104E-secreted IgM and spleen-cell-secreted IgM H chains were indistinguishable. The IgD-like membrane H chain was denser than membrane IgM H chain, and its carbohydrate content was calculated to be 15.5%. The resolution of the technique was sufficient to conclude that the apparent 1500 mol.wt. difference, as determined by sodium dodecyl sulphate/polyacrylamide-gel electrophoresis, between membrane and secreted IgM H chains was due to peptide rather than to carbohydrate. The results also imply that intact membrane IgM and IgD bind detergent and are thus integral membrane proteins.     

Replication of bromodeoxyuridylate-substituted mitochondrial DNA in yeast.

The DNA of several strains of Saccharomyces cerevisiae was labeled by growing the culture in medium supplemented with thymidylate and bromodeoxyuridylate. It was thus possible to follow the course of mitochondrial DNA replication in density shift experiments by determining the buoyant density distribution of unreplicated and replicated DNAs in analytical CsCl gradients. DNA replication was followed for three generations after transfer of cultures from light medium to heavy medium and heavy medium to light medium. Under both conditions, the density shifts observed for mitochondrial DNA were those expected for semiconservative, nondispersive replication. This was further confirmed by analysis of the buoyant density of alkali-denatured hybrid mitochondrial DNA. With this method, no significant recombination between replicated and unreplicated DNA was detected after three generations of growth.     

Transient state characteristics of changes in light conditions for the cyanobacterium Oscillatoria agardhii

The cyanobacterium Oscillatoria agardhii was subjected to changes in irradiance and to changes in light period. During transient states parameters as growth rate, pigment contents, photosynthetic activities and pool sizes of carbohydrate and proteins were followed. The changes in pigments and photosynthesis were similar for irradiance transitions and transitions in light period length. Carbohydrates served for the supply of carbon and energy during adaptation to low light conditions until a basal level of 125 g · mg dry wt^-1 was reached. After transfer to high light conditions excess carbon fixation led to the storage of carbohydrate reserve polymers up to 600 g · mg dry wt^-1. During adaptation to longer light periods cells showed an overcapacity for carbohydrate accumulation even in the presence of a high carbohydrate content at the start of the light period. A model for the feed back repression of photosynthesis related to carbohydrate accumulation was presented. In all cases protein synthesis was directly maximized under the given conditions. Growth rate defined as specific rate of change in carbon showed the fastest response after a shift in light conditions. It was concluded that adaptation of O. agardhii to changes in light conditions was directed to the optimization of growth. The observation that carbohydrate is used to supply carbon and/or energy during adaptation leads to the conclusion that changes on survival in low light depend on carbohydrate level, the efficiency of its conversion in cell material and the maintenance requirements. Such a survival strategy enables cyanobacteria to cope succesfully with light limiting conditions.Abbreviations HL high irradiance Em^-2s^-1 - LL low irradiance Em^-2s^-1 - L/D light-dark cycle h - specific growth rate h^-1 - _e specific maintenance coefficient h^-1 - _max maximal specific growth rate h^-1 - _c specific rate of change of carbon h^-1 - _protein specific rate of change of protein h^-1 - Chl a chlorophyll a - CPC C-phycocyanin - dry wt dry weight mg - light utilization efficiency nmol O₂ · mg dry wt^-1 · min^-1/Em^-1 s^-1 - P _max photosynthetic capacity nmol O₂ · mg dry wt^-1 · min^-1 - PSI photosystem I - PS II photosystem II - RC II reaction center of PS II - PQ plastoquinone     

The significance of promitochondrial structures in rat liver for mitochondrial biogenesis

1. The heavy, light and fluffy mitochondrial fractions obtained by differential centrifugation were further characterized with respect to their protein synthesizing ability in vitro, their nucleic acid content, buoyant density of their DNA and ultrastructure. 2. The light mitochondrial fraction synthesized proteins in vitro at a rate 4-5 times as high as heavy and fluffy mitochondria. The incorporation ability of this fraction was also maximally affected by the thyroid status of the animal. The radioactivity in leucyl-tRNA of the light mitochondrial fraction was about 3-4 times as high as that of the other two fractions. 3. The heavy, light and fluffy mitochondrial fractions contained small but consistent amounts of RNA and DNA. Although the DNA content was the same in all mitochondria fractions, the light mitochondria contained relatively more RNA. The buoyant density of DNA from all the fractions was 1.701g/cm(3). 4. Electron microscopy revealed that the heavy mitochondria have a typical mitochondrial architecture, with densely packed cristae and a well developed double membrane. Light mitochondria were also surrounded by double membranes, but were smaller in size and contained less cristae. The fluffy fraction consisted of a mixture of well formed mitochondria and those in the process of degradation. 5. The significance of these findings in relation to mammalian mitochondrial genesis is discussed.     

Changes in buoyant density and cell size of Escherichia coli in response to osmotic shocks.

The buoyant density of Escherichia coli was shown to be related to the osmolarity of the growth medium. This was true whether the osmolarity was adjusted with either NaCl or sucrose. When cells were grown at one osmolarity and shocked to another osmolarity, their buoyant density adjusted to nearly suit the new osmolarity. When cells were subjected to hyperosmotic shock, they became denser than expected. When cells were subjected to hypoosmotic shock they occasionally undershot the new projected density, but the undershoot was not as dramatic as the overshoot seen with hyperosmotic shocks. Shrinkage and swelling of the cells in response to osmotic shocks could account for the change in their buoyant density. The changes in cell size after osmotic shocks were measured by two independent methods. The first method measured cell size with a Coulter Counter, and the second method measured cell size by stereologic analysis of Nomarski light micrographs. Both methods gave qualitatively similar results and showed the cells to be flexible. The maximum swelling recorded was 23% of the original cell volume, while the maximum shrinkage observed was 33%.     

Metabolic relationship between invertase and acid phosphatase isoenzymes in Saccharomyces cerevisiae

Repressed cells of Saccharomyces cerevisiae, subjected to inhibition of both RNA and protein synthesis, showed a pattern of membrane-bound and cytosol acid phosphatase to the external enzyme which seemed to be linked through a precursor-product relationship.Gel exclusion chromatography did not indicate clear differences between the isoenzymes. Moreover, centrifugation experiments in CsCl and precipitation with concanavalin A suggested that there were no acid phosphatase molecules devoid of carbohydrate. Membrane-bound invertase displayed a molecular weight and a carbohydrate to protein ratio smaller than those of the exocellular enzyme. The values of molecular weight and buoyant density of the membrane-bound enzyme were closer to those found for the cytosol invertase. The stability of the level of the soluble invertase detected in the cytoplasm under derepression conditions, or after RNA or protein synthesis inhibition was found to be only apparent and represented the result of an equilibrium between synthesis and degradation.     

Equilibrium centrifugation studies of hepatitis C virus: evidence for circulating immune complexes.

The buoyant density of hepatitis C virus (HCV), with high in vivo infectivity (strain H) or low in vivo infectivity (strain F), was determined by sucrose gradient equilibrium centrifugation. Viral RNA of strain H was detected in fractions with densities of < or = 1.09 g/ml (principally approximately 1.06 g/ml), while that of strain F was found in fractions with densities of approximately 1.06 and approximately 1.17 g/ml. The observed difference was confirmed by differential flotation centrifugation; in NaCl solution with a density of 1.063 g/ml, most of the HCV RNA of strain H was detected in the top fraction, while that of strain F appeared in the bottom. The same relationship between buoyant density and infectivity was observed in flotation centrifugation experiments with other HCV strains. In immunoprecipitation experiments with anti-human immunoglobulin, HCV (as measured by HCV RNA) was precipitated from the samples with low infectivity and high density but not from those with high infectivity and low density. Examination of serial sera from a chimpanzee infected with HCV revealed parallel changes in the buoyant density and immunoprecipitability of HCV-associated RNA during the course of infection. These data suggest that HCV is bound to anti-HCV antibodies as antigen-antibody complexes in chronic hepatitis C.     

BUOYANCY REGULATION IN THE COLONIAL DIAZOTROPHIC CYANOBACTERIUM TRICHODESMIUM TENUE: ULTRASTRUCTURE AND STORAGE OF CARBOHYDRATE,POLYPHOSPHATE, AND NITROGEN1

Trichodesmium tenue Wille (1904) was examined using transmission electron microscopy to determine the role of carbohydrate, phosphorus, and nitrogen storage in buoyancy regulation. Carbohydrate storage area (mean = 2.06 ± 0.61 [SE] μm²; 6.62% of total cell area) in negatively buoyant colonies (NBCs) was significantly higher (P < 0.001) than in positively buoyant colonies (PBCs) (mean = 0.38 ± 0.06 μm²; 0.73%). Distinct diel periodicity of carbohydrate content was found in NBCs demonstrated by an increase from darkness to afternoon. Polyphosphate content was significantly higher (P < 0.001) in NBCs, with a mean of 0.44± 0.10 μm² (1.54%), as compared to PBCs, with a mean of 0.14 ± 0.05 μm² (0.24%). Polyphosphate content increased in NBCs from morning to evening, and PBCs had a 10% decrease from morning to afternoon. Calculations indicated that averaged effects of polyphosphate on increased cell density is approximately 20% of that from carbohydrate accumulation. Density contribution due to ballast weight of carbohydrate and polyphosphate indicated that NBCs were 12 times more dense than PBCs. Mean area of cyanophycin granules (N storage) was not significantly different between PBCs and NBCs. In conclusion, Trichodesmium tenue can regulate buoyancy by carbohydrate ballasting similar to that noted in limnetic cyanobacteria. Polyphosphate storage and possibly nitrogen storage products play a significant role in buoyancy regulation.     

Modelling vertical migration of the cyanobacterium Microcystis

Computer models can be helpful tools to provide abetter understanding of the mechanisms responsible forthe complex movements of cyanobacteria resulting fromchanges in buoyancy and mixing of the water column ina lake. Kromkamp & Walsby (1990) developed a verticalmigration model for Oscillatoria, that wasbased on the experimentally determinedrelationship between the rates of density change andphoton irradiance in this cyanobacterium. To adaptthis model to Microcystis, we determinedrelated changes in carbohydrate content in cultures ofMicrocystis. Samples were incubated at variousconstant values of photon irradiance and then placedin the dark. The changes in carbohydrate content ofthe cells during these incubations were investigated.The relationship between the ratio of carbohydrate toprotein and cell density in Microcystis wasestablished to permit conversion of the rates ofcarbohydrate change to rates of density change. Byplotting the calculated rates of density changeagainst the values of photon irradiance experiencedduring the incubations, an irradiance-response curveof density change was established. The curve showed adistinct maximum at 278 µmol photons m^-2s^-1. At higher values of photon irradiance, therate of density change was strongly inhibited. Apositive linear correlation was found between celldensity and the rates of density decrease in the dark.The validity of the use of rate equations of densitychange, which are based on short-term incubations atconstant values of photon irradiance, to predictdensity changes in Microcystis in fluctuatinglight regimes was tested. This was accomplished bymeasuring the time course of change in carbohydratecontent of two continuous cultures of Microcystis, which were submitted to fluctuatinglight regimes, and comparing the results with thechanges in the carbohydrate contents of these culturespredicted by the rate equations of carbohydratechange. The results showed good agreement: the rateequations of density change were therefore introducedinto the model to simulate vertical migration of Microcystis. The model predicts that the maximummigration depth of Microcystis will increasewith colony size up to a maximum of 200 µm radius.The effect of colony size on the net increase in celldensity during the light period was also investigatedwith the model. It predicts that small colonies havea higher net increase in cell density than largecolonies, but are inhibited at high photon irradiancesat the surface.     

The inverse correlation between growth rate and cell carbohydrate content of <Emphasis Type="Italic">Microcystis aeruginosa</Emphasis>

The cell carbohydrate content of cyanobacteria can alter buoyancy, and the ability to regulate the buoyancy is one of the most important mechanisms of cyanobacterial blooms. The net accumulation of carbohydrate in cell is affected by photosynthesis, respiration, synthesis of proteins, and other metabolisms, which are connected to the growth. The aim of this work is to seek the relationship between growth rate and intracellular carbohydrate content. The cell carbohydrate content in Microcystis aeruginosa cultures with different growth characteristics was investigated, and the relationship between growth rate and accumulated carbohydrate in cyanobacterial cells was analyzed. The result showed that the specific growth rate was inversely proportional to cell carbohydrate content. The growth rate was relatively high when the cell carbohydrate content was low. It can be indicated that high growth occurs when cells are buoyant, which favors blooms.     

Buoyant and potentiometric titrations of synthetic polypeptides. I. Six ionizable homopolypeptides in CsCl solutions

The buoyant density and potentiometric titrations of six ionizable homopolypeptides in concentrated CsCI solutions have been studied. These six homopolypeptides were chosen as models of the behavior of ionizable residues in proteins. Their buoyant and potentiometric results will be of value in interpreting the buoyant and potentiometric results observed for proteins. The buoyant densities for all six homopolypeptides were found to increase sigmoidally as the pH is increased. These density changes are interpreted in terms of changes in the hydrations and ion binding which are associated with the titration of the residues. Preferential hydrations for the homopolypeptides are calculated. The buoyant density titrations are combined with the potentiometric titrations to determine the relationship between the buoyant density and the degree of ionization. A better method of computing buoyant densities of proteins is described. The slope of β(ρ) has been computed for CsCl using least-squares curve fitting and this is used in calculating the isoconcentration position. This method has been found to be more accurate than calculating the isoconcentration position from the normalized isoconcentration ratio, which is known only under limited conditions.     

Age-related changes in chemical composition and physical properties of mucus glycoproteins from rat small intestine.

Mucus glycoproteins from newborn and adult rat small intestine were radiolabelled in vivo with Na2 35SO4 and isolated from mucosal homogenates by using Sepharose 4B column chromatography followed by CsCl-density-gradient centrifugation. Non-covalently bound proteins, lipids and nucleic acids were not detected in the purified glycoproteins. Amino acid, carbohydrate and sulphate compositions were similar to chemical compositions reported for other intestinal mucus glycoproteins, as were sedimentation properties. There were, however, important differences in the chemical and physical characteristics of the mucus glycoproteins from newborn and adult animals. The buoyant density in CsCl was higher for the glycoproteins from newborn rats (1.55 g/ml versus 1.47 g/ml). On sodium dodecyl sulphate/polyacrylamide/agarose-gel electrophoresis, the glycoprotein from newborn rats had a greater mobility than the adult-rat sample. Although both preparations had similar general amino acid compositions, variations were observed for individual amino acids. The total protein content was greater in the glycoprotein from newborn animals (27%, w/w, versus 18%, w/w). The molar ratio of carbohydrate to protein was less in the newborn, primarily owing to a decreased fucose and N-acetylgalactosamine content. Comparison of the molar ratio of fucose and sialic acid to galactose for both glycoproteins demonstrated a reciprocal relationship similar to that described by Dische [(1963) Ann. N.Y. Acad. Sci. 106, 259-270]. The sulphate content was greater in the glycoprotein from newborn rats (5.5%, w/w, versus 0.9%, w/w). Both had similar sedimentation coefficients in a dissociative solvent. These results suggest an age-related difference in the types of mucus glycoproteins synthesized by small intestine.     

Independence of buoyant cell density and growth rate in Escherichia coli

The relationship between growth rate and buoyant density was determined for cells from exponential-phase cultures of Escherichia coli B/r NC32 by equilibrium centrifugation in Percoll gradients at growth rates ranging from 0.15 to 2.3 doublings per h. The mean buoyant density did not change significantly with growth rate in any of three sets of experiments in which different gradient conditions were used. In addition, when cultures were allowed to enter the stationary phase of growth, mean cell volumes and buoyant densities usually remained unchanged for extended periods. These and earlier results support the existence of a highly regulated, discrete state of buoyant density during steady-state growth of E. coli and other cells that divide by equatorial fission.