A comparison of carbon flow from pre-labelled and pulse-labelled plants

Perennial rye-grass was subjected to two different¹⁴C labelling regimes to enable a partitioning of the carbon sources contributing to rhizosphere carbon-flow. Plant/soil microcosms were designed which enabled rye-grass plants to either receive a single pulse of¹⁴C?CO₂ or to be pre-labelled using a series of¹⁴C?CO₂ pulses, allowing the fate of newly photoassimilated carbon and carbon lost by root decomposition to be followed into the soil. For young rye-grass plants grown over a short period, rhizosphere carbon flow was found to be dominated by newly photoassimilated carbon. Evidence for this came from the observed percentage of the total¹⁴C budget (i.e. total¹⁴C?CO₂ fixed by the plants) lost from the root/soil system, which was 30 times greater for the pulse labelled compared to pre-labelled plants. Root decomposition was found to be less at 10°C compared to 20–25°C, though input of¹⁴C into the soil was the same at both temperatures.     

Crop residue-derived dissolved organic matter accelerates the decomposition of native soil organic carbon in a temperate agricultural ecosystem

Crop residue-derived dissolved organic matter (DOM) plays an important role in soil carbon (C) cycling. To investigate the effects of maize residue-derived DOM and urea additions on the native soil organic carbon (SOC) decomposition and soil net C balance a pot experiment was carried out during the winter wheat growing season in the North China Plain (NCP). The results showed that adding maize residue-derived DOM alone (RDOM) or together with urea (RDOM?+?N) accelerated the decomposition of native SOC and resulted in a net SOC loss. The net loss of SOC was 3.90?±?0.61 and 3.53?±?0.48?g?C?m^?2 in RDOM and RDOM?+?N treatments, respectively. The stimulatory effect of per unit DOM-C addition on the native SOC decomposition was 0.25?±?0.05 and 0.45?±?0.07 for the RDOM and RDOM?+?N treatments, respectively. Increases in the microbial biomass and the activity of β-glucosidase, invertase and cellobiohydrolase as well as soil mineral N content were responsible for a more intense priming effect in DOM-amended soils. The positive relationship between primed soil C and soil available N (R?=?0.76, P?<?0.05) suggested that the stimulation of decomposition of native SOC by DOM addition would be enhanced by nitrogen fertilizer application.     

Biochar stimulates the decomposition of simple organic matter and suppresses the decomposition of complex organic matter in a sandy loam soil

Incorporating crop residues and biochar has received increasing attention as tools to mitigate atmospheric carbon dioxide (CO₂) emissions and promote soil carbon (C) sequestration. However, direct comparisons between biochar, torrefied biomass, and straw on both labile and recalcitrant soil organic matter (SOM) remain poorly understood. In this study, we explored the impact of biochars produced at different temperatures and torrefied biomass on the simple C substrates (glucose, amino acids), plant residues (Lolium perenne L.), and native SOM breakdown in soil using a ¹⁴C labeling approach. Torrefied biomass and biochars produced from wheat straw at four contrasting pyrolysis temperatures (250, 350, 450, and 550 °C) were incorporated into a sandy loam soil and their impact on C turnover compared to an unamended soil or one amended with unprocessed straw. Biochar, torrefied biomass, and straw application induced a shift in the soil microbial community size, activity, and structure with the greatest effects in the straw‐amended soil. In addition, they also resulted in changes in microbial carbon use efficiency (CUE) leading to more substrate C being partitioned into catabolic processes. While overall the biochar, torrefied biomass, and straw addition increased soil respiration, it reduced the turnover rate of the simple C substrates, plant residues, and native SOM and had no appreciable effect on the turnover rate of the microbial biomass. The negative SOM priming was positively correlated with biochar production temperature. We therefore ascribe the increase in soil CO₂ efflux to biochar‐derived C rather than that originating from SOM. In conclusion, the SOM priming magnitude is strongly influenced by both the soil organic C quality and the biochar properties. In comparison with straw, biochar has the greatest potential to promote soil C storage. However, straw and torrefied biomass may have other cobenefits which may make them more suitable as a CO₂ abatement strategy.     

Seasonal changes and vertical distribution of root standing biomass of graminoids and shrubs at a Siberian tundra site

Background &; aims

Elevated atmospheric CO₂ (eCO₂) can affect soil-plant systems via stimulating plant growth, rhizosphere activity and the decomposition of added (crop residues) or existing (priming) soil organic carbon (C). Increases in C inputs via root exudation, rhizodeposition and root turnover are likely to alter the decomposition of crop residues but will ultimately depend on the N content of the residues and the soil.

Methods

Two soil column experiments were conducted under ambient CO₂ (aCO₂, 390 ppm) and eCO₂ (700 ppm) in a glasshouse using dual-labelled (¹³C/¹⁵N) residues of wheat (Triticum aestivum cv. Yitpi) and field pea (Pisum sativum L. cv. PBA Twilight). The effects of eCO₂ and soil N status on wheat rhizosphere activity and residue decomposition and also N recovery from crop residues with different N status (C/N ratio 19.4–115.4) by different plant treatments (wheat, wheat + 25 mg N kg^?1 and field pea).

Results

Total belowground CO₂ efflux was enhanced under eCO₂ despite no increases in root biomass. Plants decreased residue decomposition, indicating a negative rhizosphere effect. For wheat, eCO₂ reduced the negative rhizosphere effect, resulting in greater rates of decomposition and recovery of N from field pea residues, but only when N fertiliser was added. For field pea, eCO₂ enhanced the negative rhizosphere effect resulting in lower decomposition rates and N recovery from field pea residue.

Conclusions

The effect of eCO₂ on N utilisation varied with the type of residue, enhancing N utilisation of wheat but repressing that of field pea residues, which in turn could alter the amount of N supplied to subsequent crops. Furthermore, reduced decomposition of residues under eCO₂ may slow the formation of new soil C and have implications for long-term soil fertility.

     

Belowground responses of <Emphasis Type="Italic">Picea asperata</Emphasis> seedlings to warming and nitrogen fertilization in the eastern Tibetan Plateau

The impacts of global climatic change on belowground ecological processes of terrestrial ecosystems are still not clear. We therefore conducted an experiment in the subalpine coniferous forest ecosystem of the eastern edges of the Tibetan Plateau to study roots of Picea asperata seedlings and rhizosphere soil responses to soil warming and nitrogen availability from April 2007 to December 2008. The seedlings were subjected to two levels of temperature (ambient; infrared heater warming) and two nitrogen levels (0 or 25 g m⁻²year⁻¹ N). We used a free air temperature increase from an overhead infrared heater to raise both air and soil temperature by 2.1 and 2.6°C, respectively. The results showed that warming alone significantly increased total biomass, coarse root biomass and fine root biomass of P. asperata seedlings. Both total biomass and fine root biomass were increased, but coarse root biomass was significantly decreased by nitrogen fertilization and warming combined with nitrogen fertilization. Warming induced a prominent increase in soil organic carbon (SOC) and NO₃ ⁻-N of rhizosphere soil, while nitrogen fertilization significantly decreased SOC and NH₄ ⁺-N of rhizosphere soil. The warming, fertilization and warming × N fertilization interaction decreased soil microbial C significantly, but substantially increased soil microbial N. These results suggest that nitrogen deposition combined with warmer temperatures under future climatic change possibly will have no effect on fine root production of P. asperata seedlings, but could enhance the nitrification process of their rhizosphere soils in subalpine coniferous forests.     

Aging exo-enzymes can create temporally shifting,temperature-dependent resource landscapes for microbes

The rate at which catalytic capacity of microbial exo-enzymes degrades post-exudation will influence the time during which return on microbes’ investment in exo-enzyme production can be realized. Further, if exo-enzyme degradation rates vary across exo-enzymes, microbial investment returns may vary by element across time. We quantify how aging of two soil organic matter (SOM)-decaying enzymes (β-D-cellobioside, BGase; and N-acetyl-β-D-glucosaminide, NAGase) influences enzyme-substrate V _max at multiple temperatures (5, 15, 25 °C), and compute how enzyme age influences relative availabilities of C and N. Both BGase and NAGase exhibited similar, exponential declines in catalytic rate with age at 25 °C (0.22 ± 0.02 and 0.36 ± 0.14 d^?1, respectively). At 15 °C, NAGase exhibited exponential declines in catalytic rates with age (0.79 ± 0.31 d^?1), but BGase exhibited no decline. Neither enzyme exhibited a decline in catalytic rate over 72 h at 5 °C. At 15 °C, the amount of C liberated from cellulose and chitin analogues relative to N increased, on average, by more than one order of magnitude. The ratio of C:N liberated from the two substrates remained constant across enzyme age at 25 and 5 °C, but for different reasons: no differences in decay rate across enzymes at 25 °C, and no observed decay at 5 °C. Thus, temperature-dependent decreases of catalytic activity over time may influence microbial resource allocation strategies and rates of SOM decomposition. Because the enzyme decay rates we observed differ considerably from values assumed in most models, such assumptions should be revisited when parameterizing microbial process models.     

Modelling the effect of active roots on soil organic matter turnover

The aim of this experiment was to study the effect of living roots on soil carbon metabolism at different decomposition stages during a long-term incubation. Plant material labelled with ¹⁴C and ¹⁵N was incubated in two contrasting soils under controlled laboratory conditions, over two years. Half the samples were cropped with wheat (Triticum aestivum) 11 times in succession. At earing time the wheat was harvested, the roots were extracted from the soil and a new crop was started. Thus the soils were continuously occupied by active root systems. The other half of the samples was maintained bare, without plants under the same conditions. Over the 2 years, pairs of cropped and bare soils were analysed at eight sampling occasions (total-, plant debris-, and microbial biomass-C and -¹⁴C). A five compartment (labile and recalcitrant plant residues, labile microbial metabolites, microbial biomass and stabilised humified compounds) decomposition model was fitted to the labelled and soil native organic matter data of the bare and cropped soils. Two different phases in the decomposition processes showed a different plant effect. (1) During the initial fast decomposition stage, labile ¹⁴C-material stimulated microbial activities and N immobilisation, increasing the ¹⁴C-microbial biomass. In the presence of living roots, competition between micro-organisms and plants for inorganic N weakly lowered the measured and predicted total-¹⁴C mineralisation and resulted in a lower plant productivity compared to subsequent growths. (2) In contrast, beyond 3–6 months, when the labile material was exhausted, during the slow decomposition stage, the presence of living roots stimulated the mineralisation of the recalcitrant plant residue-¹⁴C in the sandy soil and of the humified-¹⁴C in the clay soil. In the sandy soil, the presence of roots also substantially stimulated decomposition of old soil native humus compounds. During this slow decomposition stage, the measured and predicted plant induced decrease in total-¹⁴C and -C was essentially explained by the predicted decrease in humus-¹⁴C and -C. The ¹⁴C-microbial biomass (MB) partly decayed or became inactive in the bare soils, whereas in the rooted soils, the labelled MB turnover was accelerated: the MB-¹⁴C was replaced by unlabelled-C from C derived from living roots. At the end of experiment, the MB-C in the cropped soils was 2.5–3 times higher than in the bare soils. To sustain this biomass and activity, the model predicted a daily root derived C input (rhizodeposition), amounting to 5.4 and 3.2% of the plant biomass-C or estimated at 46 and 41% of the daily net assimilated C (shoot + root + rhizodeposition C) in the clay and sandy soil, respectively. This revised version was published online in June 2006 with corrections to the Cover Date.     

Quality and decomposition in soil of rhizome, root and senescent leaf from Miscanthus x giganteus, as affected by harvest date and N fertilization

To predict the environmental benefits of energy crop production and use, the nature and fate of biomass residues in the soil need to be quantified. Our objective was to quantify Miscanthus x giganteus biomass recycling to soil and to assess how harvesting time and N fertilization affect their characteristics and subsequent biodegradability. The quantification of aerial and belowground biomass and their sampling were performed on 2- and 3-year-old Miscanthus stands, either fertilized with 120 kg N ha^?1 year^?1 or not fertilized, in autumn (maximal biomass production) and winter (maturity). Plant biomass was chemically characterized (total sugars, Klason lignin, C/N) and incubated in optimum decomposition conditions (15°C, ?80 kPa) for 263 days, for C and N mineralization. Accumulation of carbon in rhizomes and roots was 7.5 to 10 t C ha^?1 and represented about 50% of total plant biomass C. Senescent leaves represented about 1.5 t C ha^?1 year^?1. All residues, especially the roots, had high lignin contents, while the rhizomes also had a high soluble content due to their nutrient storage function. The C mineralization rates were closely related to the chemical characteristics of the residue, higher sugar and lower lignin contents leading to faster decomposition, as observed for rhizomes.     

Determination ofin situ KN by the chloroform fumigation-incubation method and mineralization of biomass N under anaerobic conditions

A silt loam soil from Pakistan was incubated at 30°C with increasing levels (67, 133, 200, 267 and 333 μg N g^?1 soil) of¹⁵N-labelled (NH₄)₂SO₄ and glucose (C/N ratio of 30 for all additions). At a stage when all of the applied¹⁵N was immobilized (transformed into microbial biomass), moist soil samples were subjected to the chloroform fumigation-incubation method (CFIM) for determination of K_N and microbial biomass. Mineralization of biomass derived from the applied¹⁵N and the native soil N was studied under anaerobic conditions. In situ values of K_N varied from 0.19 to 0.42 and increased with increasing levels of amendment (N + glucose). From 10 to 18% of the native soil N was found as microbial biomass. Anaerobic incubation of the soils resulted in the mineralization (determined as NH ₄ ⁺ ) of 15.08 to 29.23% of the biomass¹⁵N at different levels of amendment; 2.90 to 4.43% of the native soil N was mineralized. From 70 to 90% of the N mineralized from native soil N was derived from microbial biomass; the rest was attributed to non-biomass N.     

C and N allocation in soil under ryegrass and alfalfa estimated by 13C and 15N labelling

Background and Aims

Below-ground translocated carbon (C) released as rhizodeposits is an important driver for microbial mobilization of nitrogen (N) for plants. We investigated how a limited substrate supply due to reduced photoassimilation alters the allocation of recently assimilated C in plant and soil pools under legume and non-legume species.

Methods

A non-legume (Lolium perenne) and a legume (Medicago sativa) were labelled with ¹⁵N before the plants were clipped or shaded, and labelled twice with ¹³CO₂ thereafter. Ten days after clipping and shading, the ¹⁵N and ¹³C in shoots, roots, soil, dissolved organic nitrogen (DON) and carbon (DOC) and in microbial biomass, as well as the ¹³C in soil CO₂ were analyzed.

Results

After clipping, about 50 % more ¹³C was allocated to regrowing shoots, resulting in a lower translocation to roots compared to the unclipped control. Clipping also reduced the total soil CO₂ efflux under both species and the ¹³C recovery of soil CO₂ under L. perenne. The ¹⁵N recovery increased in the shoots of M. sativa after clipping, because storage compounds were remobilized from the roots and/or the N uptake from the soil increased. After shading, the assimilated ¹³C was preferentially retained in the shoots of both species. This caused a decreased ¹³C recovery in the roots of M. sativa. Similarly, the total soil CO₂ efflux under M. sativa decreased more than 50 % after shading. The ¹⁵N recovery in plant and soil pools showed that shading has no effect on the N uptake and N remobilization for L. perenne, but, the ¹⁵N recovery increased in the shoot of M. sativa.

Conclusions

The experiment showed that the dominating effect on C and N allocation after clipping is the need of C and N for shoot regrowth, whereas the dominating effect after shading is the reduced substrate supply for growth and respiration. Only slight differences could be observed between L. perenne and M. sativa in the C and N distribution after clipping or shading.     

Drivers of temperature sensitivity of decomposition of soil organic matter along a mountain altitudinal gradient in the Western Carpathians

Mountain forest soils contain an important stock of carbon. Their altitudinal gradient can serve as a model for research on the potential risk of increased emission of carbon dioxide to the atmosphere, in a positive feedback of global warming. Using soil samples collected at three elevations (600, 900, and 1200 m a.s.l.) from five separate slopes of the Carpathian Mountains (Poland), we studied the effects of soil physical, chemical and microbial properties controlling the temperature sensitivity (Q₁₀ values) of organic matter decomposition in forest soils. Data of soil basal respiration rate measured in laboratory conditions at six different temperatures (5, 10, 15, 20, 25 and 30 °C) were fitted to a Gaussian function. The modelled soil respiration rates differed between altitudes at temperature exceeding 15 °C, and the respiration rate of soil from 1200 m a.s.l. was higher than in soils from the two lower elevations. Based on the modelled respiration values, we calculated Q₁₀ values in the low (Q₁₀L, 0–10 °C), medium (Q₁₀M, 10–20 °C) and high (Q₁₀H, 20–30 °C) temperature ranges. The Q₁₀ values did not differ between elevations. Q₁₀L and Q₁₀M were negatively related only with the C:N ratio. Temperature sensitivity of decomposition of soil organic matter was not affected by bacterial activity and functional diversity (assessed using Biolog^® ECO plates), microbial biomass or community structure (inferred from phospholipid fatty acid assays). Our findings support a kinetics-based theory of the higher temperature sensitivity of more chemically recalcitrant soil organic matter, put forward by other authors.     

Linking temperature sensitivity of soil organic matter decomposition to its molecular structure,accessibility, and microbial physiology

Temperature sensitivity of soil organic matter (SOM) decomposition may have a significant impact on global warming. Enzyme‐kinetic hypothesis suggests that decomposition of low‐quality substrate (recalcitrant molecular structure) requires higher activation energy and thus has greater temperature sensitivity than that of high‐quality, labile substrate. Supporting evidence, however, relies largely on indirect indices of substrate quality. Furthermore, the enzyme‐substrate reactions that drive decomposition may be regulated by microbial physiology and/or constrained by protective effects of soil mineral matrix. We thus tested the kinetic hypothesis by directly assessing the carbon molecular structure of low‐density fraction (LF) which represents readily accessible, mineral‐free SOM pool. Using five mineral soil samples of contrasting SOM concentrations, we conducted 30‐days incubations (15, 25, and 35 °C) to measure microbial respiration and quantified easily soluble C as well as microbial biomass C pools before and after the incubations. Carbon structure of LFs (<1.6 and 1.6–1.8 g cm^?3) and bulk soil was measured by solid‐state ¹³C‐NMR. Decomposition Q₁₀ was significantly correlated with the abundance of aromatic plus alkyl‐C relative to O‐alkyl‐C groups in LFs but not in bulk soil fraction or with the indirect C quality indices based on microbial respiration or biomass. The warming did not significantly change the concentration of biomass C or the three types of soluble C despite two‐ to three‐fold increase in respiration. Thus, enhanced microbial maintenance respiration (reduced C‐use efficiency) especially in the soils rich in recalcitrant LF might lead to the apparent equilibrium between SOM solubilization and microbial C uptake. Our results showed physical fractionation coupled with direct assessment of molecular structure as an effective approach and supported the enzyme‐kinetic interpretation of widely observed C quality‐temperature relationship for short‐term decomposition. Factors controlling long‐term decomposition Q₁₀ are more complex due to protective effect of mineral matrix and thus remain as a central question.     

Enhanced Mineralization of [U-14C]2,4-Dichlorophenoxyacetic Acid in Soil from the Rhizosphere of Trifolium pratense

Enhanced biodegradation in the rhizosphere has been reported for many organic xenobiotic compounds, although the mechanisms are not fully understood. The purpose of this study was to discover whether rhizosphere-enhanced biodegradation is due to selective enrichment of degraders through growth on compounds produced by rhizodeposition. We monitored the mineralization of [U-¹⁴C]2,4-dichlorophenoxyacetic acid (2,4-D) in rhizosphere soil with no history of herbicide application collected over a period of 0 to 116 days after sowing of Lolium perenne and Trifolium pratense. The relationships between the mineralization kinetics, the number of 2,4-D degraders, and the diversity of genes encoding 2,4-D/α-ketoglutarate dioxygenase (tfdA) were investigated. The rhizosphere effect on [¹⁴C]2,4-D mineralization (50 μg g⁻¹) was shown to be plant species and plant age specific. In comparison with nonplanted soil, there were significant (P < 0.05) reductions in the lag phase and enhancements of the maximum mineralization rate for 25- and 60-day T. pratense soil but not for 116-day T. pratense rhizosphere soil or for L. perenne rhizosphere soil of any age. Numbers of 2,4-D degraders in planted and nonplanted soil were low (most probable number, <100 g⁻¹) and were not related to plant species or age. Single-strand conformational polymorphism analysis showed that plant species had no impact on the diversity of α-Proteobacteria tfdA-like genes, although an impact of 2,4-D application was recorded. Our results indicate that enhanced mineralization in T. pratense rhizosphere soil is not due to enrichment of 2,4-D-degrading microorganisms by rhizodeposits. We suggest an alternative mechanism in which one or more components of the rhizodeposits induce the 2,4-D pathway.     

Biodegradation of atrazine in surface soils and subsurface sediments collected from an agricultural research farm

The purpose of the present study was to assess atrazine (2-chloro-4-ethylamino-6-isopropylamino-s-triazine) mineralization by indigenous microbial communities and to investigate constraints associated with atrazine biodegradation in environmental samples collected from surface soil and subsurface zones at an agricultural site in Ohio. Atrazine mineralization in soil and sediment samples was monitored as ¹⁴CO₂ evolution in biometers which were amended with ¹⁴C-labeled atrazine. Variables of interest were the position of the label ([U-¹⁴C-ring]-atrazine and [2-¹⁴C-ethyl]-atrazine), incubation temperature (25°C and 10°C), inoculation with a previously characterized atrazine-mineralizing bacterial isolate (M91-3), and the effect of sterilization prior to inoculation. In uninoculated biometers, mineralization rate constants declined with increasing sample depth. First-order mineralization rate constants were somewhat lower for [2-¹⁴C-ethyl]-atrazine when compared to those of [U-¹⁴C-ring]-atrazine. Moreover, the total amount of ¹⁴CO₂ released was less with [2-¹⁴C-ethyl]-atrazine. Mineralization at 10°C was slow and linear. In inoculated biometers, less ¹⁴CO₂ was released in [2-¹⁴C-ethyl]-atrazine experiments as compared with [U-¹⁴C-ring]-atrazine probably as a result of assimilatory incorporation of ¹⁴C into biomass. The mineralization rate constants (k) and overall extents of mineralization (P _max ) were higher in biometers that were not sterilized prior to inoculation, suggesting that the native microbial populations in the sediments were contributing to the overall release of ¹⁴CO₂ from [U-¹⁴C-ring]-atrazine and [2-¹⁴C-ethyl]-atrazine. A positive correlation between k and aqueous phase atrazine concentrations (C _eq ) in the biometers was observed at 25°C, suggesting that sorption of atrazine influenced mineralization rates. The sorption effect on atrazine mineralization was greatly diminished at 10°C. It was concluded that sorption can limit biodegradation rates of weakly-sorbing solutes at high solid-to-solution ratios and at ambient surface temperatures if an active degrading population is present. Under vadose zone and subsurface aquifer conditions, however, low temperatures and the lack of degrading organisms are likely to be primary factors limiting the biodegradation of atrazine.     

Spatial distribution and turnover of root-derived carbon in alfalfa rhizosphere depending on top- and subsoil properties and mycorrhization

Aims

This study analyzed the extent to which root exudates diffuse from the root surface towards the soil depending on topsoil and subsoil properties and the effect of arbuscular mycorrhizal fungal hyphae on root-derived C distribution in the rhizosphere.

Methods

Alfalfa was grown in three-compartment pots. Nylon gauze prevented either roots alone or roots and arbuscular mycorrhizal fungal hyphae from penetrating into the rhizosphere compartments. ¹⁴CO₂ pulse labeling enabled the measurement of ¹⁴C-labeled exudates in dissolved (DOC) and total organic carbon (TOC) in the rhizosphere, distributed either by diffusion alone or by diffusion, root hair and hyphal transport.

Results

Root exudation and microbial decomposition of exudates was higher in the rhizosphere with topsoil compared to subsoil properties. Exudates extended over 28 mm (DOC) and 20 mm (TOC). Different soil properties and mycorrhization, likely caused by the low arbuscular mycorrhizal colonization of roots (13?±?4 % (topsoil properties) and 18?±?5 % (subsoil properties)), had no effect.

Conclusions

Higher microbial decomposition compensated for higher root exudation into the rhizosphere with topsoil properties, which resulted in equal exudate extent when compared to the rhizosphere with subsoil properties. Higher ¹⁴C activity used for labeling compared with previous studies enabled the detection of low exudate concentrations at longer distances from the root surface.     

Decomposition of soil and plant carbon from pasture systems after 9 years of exposure to elevated CO2: impact on C cycling and modeling

Elevated atmospheric CO₂ may alter decomposition rates through changes in plant material quality and through its impact on soil microbial activity. This study examines whether plant material produced under elevated CO₂ decomposes differently from plant material produced under ambient CO₂. Moreover, a long‐term experiment offered a unique opportunity to evaluate assumptions about C cycling under elevated CO₂ made in coupled climate–soil organic matter (SOM) models. Trifolium repens and Lolium perenne plant materials, produced under elevated (60 Pa) and ambient CO₂ at two levels of N fertilizer (140 vs. 560 kg ha^?1 yr^?1), were incubated in soil for 90 days. Soils and plant materials used for the incubation had been exposed to ambient and elevated CO₂ under free air carbon dioxide enrichment conditions and had received the N fertilizer for 9 years. The rate of decomposition of L. perenne and T. repens plant materials was unaffected by elevated atmospheric CO₂ and rate of N fertilization. Increases in L. perenne plant material C : N ratio under elevated CO₂ did not affect decomposition rates of the plant material. If under prolonged elevated CO₂ changes in soil microbial dynamics had occurred, they were not reflected in the rate of decomposition of the plant material. Only soil respiration under L. perenne, with or without incorporation of plant material, from the low‐N fertilization treatment was enhanced after exposure to elevated CO₂. This increase in soil respiration was not reflected in an increase in the microbial biomass of the L. perenne soil. The contribution of old and newly sequestered C to soil respiration, as revealed by the ¹³C‐CO₂ signature, reflected the turnover times of SOM–C pools as described by multipool SOM models. The results do not confirm the assumption of a negative feedback induced in the C cycle following an increase in CO₂, as used in coupled climate–SOM models. Moreover, this study showed no evidence for a positive feedback in the C cycle following additional N fertilization.     

Dicarboxylate transport in maize mesophyll chloroplasts

Evidence is presented for high rates of carrier-mediated dicarboxylate anion transport in maize mesophyll chloroplasts. Radioactively labeled malate is transported across the chloroplast envelope leading to accumulation in the stroma. Malate in the stroma will exchange for external malate, oxaloacetate, glutamate, aspartate, and oxoglutarate. At 4 °C the V of malate uptake is 50 μmol·h^?1·mg Chl^?1 and the K_m for malate is 0.5 mm. Oxaloacetate competitively inhibits malate uptake with a K_i estimated to be 0.3 mm. The temperature dependence of malate uptake indicates an activation energy of 12 kcal/mol, and extrapolation using this value gives a rate of transport at 30 °C of approximately 300 μmol·h^?1·mg Chl^?1. This rate approximates the rates of photosynthetic malate production by these chloroplasts.     

Microbial transformations of C and N in a boreal forest floor as affected by temperature

The effects of temperature on N mineralization were studied in two organic surface horizons (LF and H) of soil from a boreal forest. The soil was incubated at 5 °C and 15 °C after adding ¹⁵ N and gross N fluxes were calculated using a numerical simulation model. The model was calibrated on microbial C and N, basal respiration, and KCl-extractable NH₄ ⁺, NO₃ ⁻, ¹⁵NH₄ ⁺ and ¹⁵ NO₃ ⁻. In the LF layer, increased temperature resulted in a faster turnover of all N pools. In both layers net N mineralization did not increase at elevated temperature because both gross NH₄ ⁺ mineralization and NH₄ ⁺ immobilization increased. In the H layer, however, both gross NH₄ ⁺ mineralization and NH₄ ⁺ immobilization were lower at 15 °C than at 5 °C and the model predicted a decrease in microbial turnover rate at higher temperature although measured microbial activity was higher. The decrease in gross N fluxes in spite of increased microbial activity in the H layer at elevated temperature may have been caused by uptake of organic N. The model predicted a decrease in pool size of labile organic matter and microbial biomass at elevated temperature whereas the amount of refractory organic matter increased. Temperature averaged microbial C/N ratio was 14.7 in the LF layer suggesting a fungi-dominated decomposer community whereas it was 7.3 in the H layer, probably due to predominance of bacteria. Respiration and microbial C were difficult to fit using the model if the microbial C/N ratio was kept constant with time. A separate ¹⁵N-enrichment study with the addition of glucose showed that glucose was metabolized faster in the LF than in the H layer. In both layers, decomposition of organic matter appeared to be limited by C availability. This revised version was published online in June 2006 with corrections to the Cover Date.     

N-ammonia assimilation, 2-oxoglutarate transport, and glutamate export in spinach chloroplasts in the presence of dicarboxylates in the light

The direct incorporation of ¹⁵NH₄Cl into amino acids in illuminated spinach (Spinacia oleracea L.) chloroplasts in the presence of 2-oxoglutarate plus malate was determined. The amido-N of glutamine was the most highly labeled N-atom during ¹⁵NH₄ assimilation in the presence of malate. In 4 minutes the ¹⁵N-label of the amido-N of glutamine was 37% enriched. In contrast, values obtained for both the N-atom of glutamate and the amino-N of glutamine were only about 20% while that of the N-atom of aspartate was only 3%. The addition of malate during the assimilation of ¹⁵NH₄Cl and Na¹⁵NO₂ greatly increased the ¹⁵N-label into glutamine but did not qualitatively change the order of the incorporation of ¹⁵N-label into all the amino acids examined. This evidence indicates the direct involvement of the glutamine synthetase/glutamate synthase pathway for ammonia and nitrite assimilation in isolated chloroplasts. The addition of malate or succinate during ammonia assimilation also led to more than 3-fold increase in [¹⁴C]2-oxoglutarate transport into the chloroplast as well as an increase in the export of [¹⁴C]glutamate out of the chloroplast. Little [¹⁴C]glutamine was detected in the medium of the chloroplast preparations. The stimulation of ¹⁵N-incorporation and [¹⁴C]glutamate export by malate could be directly attributed to the increase in 2-oxoglutarate transport activity (via the 2-oxoglutarate translocator) observed in the presence of exogenous malate.