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1.
Shigehiro Hirano Tomikazu Nishio Tatsuro Ito 《Bioscience, biotechnology, and biochemistry》2013,77(10):1963-1967
The action of P2O5 in DMSO on methyl α-d-glucopyranoside, sucrose and trehalose afforded nondializable, phosphorylated glycans in 6~34% yields. Polysucrose has a molecular weight of ~9,500. The synthetic glycans consist of carbohydrate (46~59%) and P (11.4~13.1%) and show reducing sugar values (5.0~30.8%). The alkaline hydrolysis of polysucrose was accompanied with a depolymerization and afforded sugar phosphates and oligosaccharides. The periodate oxidation gave formic acid (0.15~0.34 mole) and formaldehyde (0.07~0.17 mole/monosaccharide residue). The methylation study indicated their variously branched structures. 2,3,4,6-Tetra-O-methyl-d-glucose was found in only 0.7 ~3.2% yields, and this is in agreement with their weak precipitation reactions with Con A. It is considered that the glycans are produced from nonreducing mono- and oligosaccharides by dehydration, transglycosidation and esterification with phosphate. 相似文献
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研究了表油菜素内酯(epi-BR)对拟南芥细胞体外分化的影响.表明epi-BR不仅能促进愈伤组织的增殖,而且还能有效地诱导愈伤组织转绿,继而分化绿芽和长成小植株,其诱导频率高达70%以上。电镜观察表明,epi-BR诱导的转绿细胞中的叶绿体发育正常。 相似文献
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The plant-metabolic response to amphipathic peptides produced by the soil fungi of the genus Trichoderma remains largely unknown. The present investigation was undertaken to examine the death process in alamethicin-treated Arabidopsis thaliana plantlets. The rapid death triggered by alamethicin (at 50 microM) was shown to be associated with protein-synthesis arrest and with specific cleavage of 18S and 25S ribosomal RNA. The use of an inhibitor of nitric oxide (NO) synthases and of an NO scavenger suggested that rRNA cleavage was suppressed by NO. Experiments conducted with a synthetic alamethicin analogue, in which all alpha-aminoisobutyric acid (Aib) residues have been replaced by leucine moieties, showed that the non-coded residues are essential for the ability of the peptaibol to induce rRNA cleavage in Arabidopsis. Our data indicate that further investigations on the mode of action of alamethicin in planta could be of great interest to study the death-signaling pathway associated with rRNA degradation in plants. 相似文献
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《Bioscience, biotechnology, and biochemistry》2013,77(12):2674-2677
Double-stranded RNA (dsRNA) induces sequence-specific gene silencing in eukaryotes through a process known as RNA interference (RNAi). RNAi is now used as a powerful tool for functional genomics in many eukaryotes, including plants. We herein report a dsRNA-mediated transient RNAi assay system using protoplasts from Arabidopsis mesophyll cells and suspension-cultured cells (cell line T87). Introduction of dsRNA into protoplasts led to marked silencing of target transgenes. Our assay system would provide a convenient and efficient way to induce RNAi in protoplasts of the model plant Arabidopsis thaliana. 相似文献
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利用激光扫描共聚焦显微镜研究植物细胞发育形态学变化 总被引:2,自引:0,他引:2
通过激光扫描共聚焦显微镜,利用不同种类(波长)的激光研究植物细胞发育形态学变化。结果表明,利用紫外激光(351 nm)扫描可以清楚地观察到拟南芥叶片表皮细胞的形态及其变化,在已分化的叶片表皮上可观察到包括“铺垫”表皮细胞(epidermal pavement cells)、气孔保卫细胞(guard cell)、气孔伴胞(subsidiarycells)、表皮毛细胞(trichomes)和表皮毛的足细胞(socket cells)等多种形态不同的细胞种类;利用蓝光激光(488nm)辅助曙红浅染,可清晰地显示出拟南芥根生长区内部的各种原始细胞,包括静止区(quiescent center)细胞、皮层/内皮层原始细胞(cortex/endodermal initial cell)、表皮/根冠原始细胞(epidermal/root cap initial cell)和中柱/根冠原始细胞(columella/root cap initial cell)等。利用双光子激光(800 nm)连续扫描30 s可以诱发叶绿体产生自发荧光,并可观察到叶绿体在叶肉细胞中的运动轨迹。结果说明激光扫描共聚焦显微镜在植物细胞形态及发育研究上具有独特的功能。 相似文献
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Cryptic population genetic structure: the number of inferred clusters depends on sample size 总被引:1,自引:0,他引:1
Fogelqvist J Niittyvuopio A Agren J Savolainen O Lascoux M 《Molecular ecology resources》2010,10(2):314-323
Clustering methods have been used extensively to unravel cryptic population genetic structure. We investigated the effect of the number of individuals sampled in each location on the resulting number of clusters. Our study was motivated by recent results in Arabidopsis thaliana: studies in which more than one individual was sampled per location apparently have led to a much higher number of clusters than studies where only one individual was sampled in each location, as is generally done in this species. We show, using computer simulations and microsatellite data in A. thaliana, that the number of sampled individuals indeed has a strong impact on the number of resulting clusters. This effect is smaller if the sampled populations have a hierarchical structure. In most cases, sampling 5–10 individuals per population should be enough. The results argue for abandoning the concept of ‘accessions’ in partially selfing organisms. 相似文献
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Horiguchi G Fujikura U Ferjani A Ishikawa N Tsukaya H 《The Plant journal : for cell and molecular biology》2006,48(4):638-644
Observations of cellular organization are essential in understanding the mechanisms underlying leaf morphogenesis. These observations require several preparative steps, such as fixation and clearing of organs, and such procedures are time-consuming and labor-intensive for large-scale analyses. Thus, we have developed simple methods for the observation of leaf epidermal and mesophyll cells. To visualize the epidermis, a gel cast was made of the leaf surface, which was then observed under a light microscope. To visualize the leaf mesophyll cells, leaves were immersed in a solution containing Triton X-100, briefly centrifuged, and then viewed under a light microscope. These methods allowed us to conduct a histological phenome analysis for a large number of known and newly isolated leaf-shape/size mutants of Arabidopsis thaliana by measuring various parameters, including cell number, size, and distribution of cells within a leaf blade. Mutants showed changes in leaf size caused by specific increases or decreases in the number and/or size of cells. In addition, altered cell distributions in the leaf blade were observed, resulting from increases or decreases in the number of cells along the proximo-distal or medio-lateral axis, or recruitment of cells along a particular axis at the expense of other leaf parts. These results provide a phenomic view of the cellular behavior involved in organ size control and leaf-shape patterning. 相似文献
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Simple Identification of Transgenic Arabidopsis Plants Carrying a Single Copy of the Integrated Gene
《Bioscience, biotechnology, and biochemistry》2013,77(7):1780-1783
Transgenic Arabidopsis thaliana plants carrying a single copy of integrated DNA can be identified by single-step genomic polymerase chain reaction. The reaction employs two sets of primer pairs with the same melting temperature that amplify the amplicons derived from the integrated T-DNA together with those from an endogenous single-copy gene as a reference. When the band intensity ratio is one, this means that the transgenic plants are carrying a single copy of the integrated gene per haploid. 相似文献
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转RNAi-SPS5.1拟南芥的获得及表型分析 总被引:1,自引:0,他引:1
在克隆了拟南芥蔗糖磷酸合成酶AtSPS5.1的基础上,选择其中特异性的188 bp片段,以正反两个方向插入克隆载体pKANNIBAL中,再将该克隆载体连接入具有NPTⅡ筛选标记的表达载体pART-27中,构建成RNAi-SPS5.1干涉载体.采用农杆菌介导的真空渗透法转化拟南芥,得到T0代的种子,筛选阳性植株,并进行RT-PCR检测,结果表明:RNAi技术能够有效抑制SPS5.1基因的表达,且SPS5.1被干涉后植株的生长发育明显较野生型差,说明该基因的表达对拟南芥生长发育具有重要作用. 相似文献
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在RNA代谢过程中,需要许多蛋白和核酸的参与,其中一类蛋白就是RNA解旋酶。RNA解旋酶通过水解ATP获得能量来参与RNA代谢的多个方面,包括核内转录、pre-mRNA的剪切、核糖体发生、核质运输、蛋白质翻译、RNA降解、细胞器内基因的表达。DEAD-box蛋白家族是RNA解旋酶中最大的亚家族,它具有9个保守结构域,因motifyⅡ的保守氨基酸序列Asp-Glu-Ala-Asp(DEAD)而命名。该家族在酵母、拟南芥(Arabidopsis thaliana Heynh.)和人类基因组中都有较多的家庭成员。近年来,研究者对拟南芥DEAD-box蛋白家族的结构和功能进行了一些研究,本文着重总结DEAD-box基因家族对拟南芥生长发育的影响。 相似文献
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Yan An Yongfeng Lou Yingwu Xu 《Acta Crystallographica. Section F, Structural Biology Communications》2013,69(11):1295-1298
Peptide release factor 1 (RF1) regulates the termination of translation in protein synthesis by recognizing the stop codons. The eukaryotic RF1s (eRF1s) from Arabidopsis thaliana and human have different stop‐codon preferences even though they share high sequence similarity. Based on known RF1 structures, it has been suggested that the specificity depends on both the local structure and the domain arrangement, but the lack of a structure of Arabidopsis eRF1 hinders a detailed comparison. To reveal the mechanism of stop‐codon recognition and compare it with that of human eRF1, one of the three Arabidopsis eRF1s, AteRF1‐1, was studied and a preliminary X‐ray crystallographic analysis is reported here. The protein was overexpressed in Escherichia coli and crystallized at room temperature using the vapour‐diffusion method. Crystals were grown from 1.6 M lithium sulfate, 0.1 M Tris–HCl pH 8.0, 2%(v/v) PEG 400 and diffracted to 3.77 Å resolution. The data were processed in point group 622, with unit‐cell parameters a = b = 136.6, c = 325.7 Å. 相似文献
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Hubert Mayerhofer Jochen Mueller‐Dieckmann 《Acta Crystallographica. Section F, Structural Biology Communications》2013,69(9):1029-1032
Ethylene signalling is initiated by a group of membrane‐bound receptors with similarity to two‐component systems. ERS1 belongs, together with ETR1, to subfamily 1, which plays a predominant role in ethylene signalling. The dimerization domain of ERS1 was crystallized in space groups C2221 and P21212, with two and four molecules per asymmetric unit, respectively. The crystals diffracted X‐ray radiation to 1.9 Å resolution. 相似文献
14.
Endonuclease V is highly conserved, both structurally and functionally, from bacteria to humans, and it cleaves the deoxyinosine-containing double-stranded DNA in Escherichia coli, whereas in Homo sapiens it catalyses the inosine-containing single-stranded RNA. Thus, deoxyinosine and inosine are unexpectedly produced by the deamination reactions of adenine in DNA and RNA, respectively. Moreover, adenosine-to-inosine (A-to-I) RNA editing is carried out by adenosine deaminase acting on dsRNA (ADARs). We focused on Arabidopsis thaliana endonuclease V (AtEndoV) activity exhibiting variations in DNA or RNA substrate specificities. Since no ADAR was observed for A-to-I editing in A. thaliana, the possibility of inosine generation by A-to-I editing can be ruled out. Purified AtEndoV protein cleaved the second and third phosphodiester bonds, 3′ to inosine in single-strand RNA, at a low reaction temperature of 20–25°C, whereas the AtEndoV (Y100A) protein bearing a mutation in substrate recognition sites did not cleave these bonds. Furthermore, AtEndoV, similar to human EndoV, prefers RNA substrates over DNA substrates, and it could not cleave the inosine-containing double-stranded RNA. Thus, we propose the possibility that AtEndoV functions as an RNA substrate containing inosine induced by RNA damage, and not by A-to-I RNA editing in vivo. 相似文献
15.
花粉发育的转录组研究进展 总被引:2,自引:1,他引:2
在受精过程中花粉通过其极性生长的花粉管将精细胞运送到胚囊启动双受精,除了在有性生殖过程中的重要作用外,花粉及其极性生长的花粉管也是研究植物生长发育的重要模式材料。随着模式植物拟南芥和水稻基因组测序的完成,在基因组水平上揭示花粉发育以及花粉管极性生长的分子基础已成为可能。经过最近几年的研究已初步明确了花粉转录组特征。本文主要讨论了拟南芥花粉转录组学的研究进展,以期帮助读者对花粉发育的研究有全面了解。 相似文献
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拟南芥紫色酸性磷酸酶基因(AtPAPs)对磷饥饿的响应 总被引:2,自引:0,他引:2
根据拟南芥基因组测序所获得的信息,对拟南芥2号染色 7个可能的紫色酸性磷酸酶基因进行了cDNA克隆、测序及生物信息学分析,并对其在磷饥饿状态下转录水平的表达模式进行了研究,发现大部分的AtPAPs都是组成性表达的,只有AtPAP9,AtPAP10是诱导表达的,其中AtPAP9的转录产物是磷饥饿重新诱导的,而AtPAP10是磷饥饿诱导增加的。 相似文献
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Zun Wang Xiaohua Li Junxiao Yang Yun Gong Huixi Zhang Xiang Qiu Ying Liu Cui Zhou Yu Chen Jonathan Greenbaum Liang Cheng Yihe Hu Jie Xie Xucheng Yang Yusheng Li Martin R. Schiller Yiping Chen Lijun Tan Si-Yuan Tang Hui Shen Hong-Mei Xiao Hong-Wen Deng 《International journal of biological sciences》2021,17(15):4192