Structural and functional variability within the canopyand its relevance for carbon gain and stress avoidance

The functional variability in leaf angle distribution within the canopy was analysed with respect to regulation of light interception and photoprotection. Leaf orientation strongly determined the maximum photochemical efficiency of PSII (F_v/F_m) during summer: horizontal leaves were highly photoinhibited whereas vertical leaf orientation protected the leaves from severe photoinhibition. The importance of leaf orientation within the canopy was analysed in two Mediterranean macchia species with distinct strategies for drought and photoinhibition avoidance during summer. The semi-deciduous species (Cistus monspeliensis) exhibited strong seasonal but minimal spatial variability in leaf orientation. Reversible structural regulation of light interception by vertical leaf orientation during summer protected the leaves from severe photoinhibition. The evergreen sclerophyll (Quercus coccifera) exhibited high spatial variability in leaf angle distribution throughout the year and was less susceptible to photoinhibition. The importance of both strategies for plant primary production was analysed with a three-dimensional canopy photoinhibition model (CANO-PI). Simulations indicated that high variability in leaf angle orientation in Q. coccifera resulted in whole-plant carbon gain during the summer, which was 94 % of the maximum rate achieved by theoretical homogeneous leaf orientations. The high spatial variability in leaf angle orientation may be an effective compromise between efficient light harvesting and avoidance of excessive radiation in evergreen plants and may optimize annual primary production. Whole plant photosynthesis was strongly reduced by water stress and photoinhibition in C. monspeliensis; however, the simulations indicated that growth-related structural regulation of light interception served as an important protection against photoinhibitory reduction in whole-plant carbon gain.     

Leaf optical properties in amphibious plant species are affected by multiple leaf traits

The amphibious plant species Sagittaria sagittifolia and Ranunculus lingua here serve as model systems to study differences in leaf optical properties of different leaf types that develop in aquatic and terrestrial environments. We aimed to determine leaf traits that explain most of the variability in the reflectance and transmittance spectra in the range from 280 to 880 nm. Comparisons of leaves of the same form revealed marked differences in their structures and particularly in the content of total methanol-soluble UV-absorbing compounds. Submerged leaves transmit radiation over the whole range measured, but emerged leaves transmit only at wavelengths from 500 to 650 nm, and above 690 nm. Redundancy analysis shows that biochemical leaf traits, namely the UV-absorbing compounds chlorophyll a and b, together with the specific leaf area (SLA), significantly affect the reflectance spectra, explaining 60% of the spectra variability. Pigment levels negatively affect reflectance, while the effect of SLA is positive. Physical traits like thickness of the palisade mesophyll, SLA, and thickness of the lower and upper epidermis, along with anthocyanin content, explain 62% of the transmittance spectra variability. This study provides new insight into the understanding of data collected for aquatic and semi-aquatic plants based on spectral analyses.     

Overexpression of a Homeobox Gene, LeT6, Reveals Indeterminate Features in the Tomato Compound Leaf

The cultivated tomato (Lycopersicon esculentum) has a unipinnate compound leaf. In the developing leaf primordium, major leaflet initiation is basipetal, and lobe formation and early vascular differentiation are acropetal. We show that engineered alterations in the expression of a tomato homeobox gene, LeT6, can cause dramatic changes in leaf morphology. The morphological states are variable and unstable and the phenotypes produced indicate that the tomato leaf has an inherent level of indeterminacy. This is manifested by the production of multiple orders of compounding in the leaf, by numerous shoot, inflorescence, and floral meristems on leaves, and by the conversion of rachis-petiolule junctions into “axillary” positions where floral buds can arise. Overexpression of a heterologous homeobox transgene, kn1, does not produce such phenotypic variability. This indicates that LeT6 may differ from the heterologous kn1 gene in the effects manifested on overexpression, and that 35S-LeT6 plants may be subject to alterations in expression of both the introduced and endogenous LeT6 genes. The expression patterns of LeT6 argue in favor of a fundamental role for LeT6 in morphogenesis of leaves in tomato and also suggest that variability in homeobox gene expression may account for some of the diversity in leaf form seen in nature.     

The potential saprotrophic capacity of foliar endophytic fungi from Quercus gambelii

Endophytic fungi occur in living tissues of terrestrial plants. Many of these fungi are primarily biotrophic, but the trophic range of endophytic fungi as a group may not be fully appreciated. In this study, our goals were (1) for the Class 3 foliar endophytic fungi isolated from Quercus gambelii, determine their potential saprotrophic capacity, which we define as the difference in growth rate in culture on Quercus gambelii leaf litter medium and control medium lacking leaf litter and (2) quantify sources of variation among isolates of these endophytic fungi in potential saprotrophic capacity, including variation due to microsite within host trees (leaves receiving full sun vs. shade) and variation within and among fungal genera. We found that 48 of the 49 tested endophytic fungal isolates have significant potential saprotrophic capacity. Contrary to expectation, the amount of solar radiation available to the leaf from which the fungi were isolated had no significant impact on potential saprotrophic capacity and there was more variability in potential saprotrophic capacity among isolates within a genus than among genera. Our results suggest that some Class 3 endophytic fungi may have the potential to function as saprotrophic fungi within plant litter, but this remains to be seen for these Quercus gambelii isolates under more natural circumstances.     

Differentiation of Diploid and Triploid Taxa within Taraxacum sect. Erythrosperma (Asteraceae) from the Pannonian Region

Six taxa of the genus Taraxacum sect. Erythrosperma were analyzed morphometrically using multivariate methods. A total of 391 specimens from Slovakia, Hungary, Czech Republic and Austria were studied. This study aimed to explore if leaf shape can be used to differentiate diploids and triploids, to verify if triploid microspecies deserve separate taxonomic status, and if the diploid plants can be divided into phenotype groups. The analysis of leaf-shape variability revealed no notable difference between diploid and triploid plants. The analysis of the triploid microspecies T. cristatum, T. danubium, T. parnassicum, T. princeps and T. proximum s.l. resulted in their differentiation into separate groups. For differentiation, the characters with a higher determination value were employed, especially the shape of a terminal leaf lobe, the position of outer bracts, the number of lateral lobes and their termination. Analyzing a very variable diploid species T. erythrospermum enabled the definition of four basic phenotypes based on leaf shape. The phenotypes differed in leaf size and shape in relation to environmental factors such as intensity of light, nutrients, moisture, or disturbance. In conclusion, to evaluate the taxonomic status of particular taxa within Taraxacum sect. Erythrosperma it is inevitable to understand the complex leaf-shape variability, being a result of both genetic variability and phenotypic plasticity.     

Intraspecific variability in functional traits matters: case study of Scots pine

Although intraspecific trait variability is an important component of species ecological plasticity and niche breadth, its implications for community and functional ecology have not been thoroughly explored. We characterized the intraspecific functional trait variability of Scots pine (Pinus sylvestris) in Catalonia (NE Spain) in order to (1) compare it to the interspecific trait variability of trees in the same region, (2) explore the relationships among functional traits and the relationships between them and stand and climatic variables, and (3) study the role of functional trait variability as a determinant of radial growth. We considered five traits: wood density (WD), maximum tree height (H _max), leaf nitrogen content (N_mass), specific leaf area (SLA), and leaf biomass-to-sapwood area ratio (B _L:A _S). A unique dataset was obtained from the Ecological and Forest Inventory of Catalonia (IEFC), including data from 406 plots. Intraspecific trait variation was substantial for all traits, with coefficients of variation ranging between 8 % for WD and 24 % for B _L:A _S. In some cases, correlations among functional traits differed from those reported across species (e.g., H _max and WD were positively related, whereas SLA and N_mass were uncorrelated). Overall, our model accounted for 47 % of the spatial variability in Scots pine radial growth. Our study emphasizes the hierarchy of factors that determine intraspecific variations in functional traits in Scots pine and their strong association with spatial variability in radial growth. We claim that intraspecific trait variation is an important determinant of responses of plants to changes in climate and other environmental factors, and should be included in predictive models of vegetation dynamics.     

Genetic Diversity of Pierce's Disease Strains and Other Pathotypes of Xylella fastidiosa

Strains of Xylella fastidiosa isolated from grape, almond, maple, and oleander were characterized by enterobacterial repetitive intergenic consensus sequence-, repetitive extragenic palindromic element (REP)-, and random amplified polymorphic DNA (RAPD)-PCR; contour-clamped homogeneous electric field (CHEF) gel electrophoresis; plasmid content; and sequencing of the 16S-23S rRNA spacer region. Combining methods gave greater resolution of strain groupings than any single method. Strains isolated from grape with Pierce's disease (PD) from California, Florida, and Georgia showed greater than previously reported genetic variability, including plasmid contents, but formed a cluster based on analysis of RAPD-PCR products, NotI and SpeI genomic DNA fingerprints, and 16S-23S rRNA spacer region sequence. Two groupings of almond leaf scorch (ALS) strains were distinguished by RAPD-PCR and CHEF gel electrophoresis, but some ALS isolates were clustered within the PD group. RAPD-PCR, CHEF gel electrophoresis, and 16S-23S rRNA sequence analysis produced the same groupings of strains, with RAPD-PCR resolving the greatest genetic differences. Oleander strains, phony peach disease (PP), and oak leaf scorch (OLS) strains were distinct from other strains. DNA profiles constructed by REP-PCR analysis were the same or very similar among all grape strains and most almond strains but different among some almond strains and all other strains tested. Eight of 12 ALS strains and 4 of 14 PD strains of X. fastidiosa isolated in California contained plasmids. All oleander strains carried the same-sized plasmid; all OLS strains carried the same-sized plasmid. A plum leaf scald strain contained three plasmids, two of which were the same sizes as those found in PP strains. These findings support a division of X. fastidiosa at the subspecies or pathovar level.     

Sesquiterpenes in leaf pocket resins of Copaifera species

Four sesquiterpene leaf resin components were isolated and identified from Copaifera leaf resin. Additional GC and mass spectrometric evidence support the close similarity of Copaifera leaf pocket resin composition with that of the related genus, Hymenaea.     

Leaf wax constituents of some myrtaceous species

Eucalyptin and 8-desmethyleucalyptin have been isolated from the leaf wax coatings of several species of Eucalyptus, from Syncarpia glomulifera, Lophostemon confertus and an Angophora hybrid indicating that C-methylated flavones may be fairly distinctive of the family Myrtaceae. Ursolic acid has been isolated from the leaf waxes of E. youmanii, S. glomulifera, Leptospermum petersonii and Melaleuca quinquenervia, friedelin from Lophostemon confertus and 4,6-dimethoxy-2-hydroxyacetophenone from E. michaeliana.     

Production of Mannitol by Fungi from Cotton Dust

Cotton dust associated with high pulmonary function decrements contains relatively high levels of mannitol. In this study, cotton leaf and bract tissue and dust isolated from cotton leaf tissue were examined by optical microscopy, scanning electron microscopy, and capillary gas chromatography. Alternaria alternata, Cladosporium herbarum, Epicoccum purpurascens, and Fusarium pallidoroseum were isolated from cotton leaf dust. The fungal samples, cotton dust, and cotton leaf contained mannitol. This study demonstrates that fungi from a late-fall harvest of cotton leaf material produce mannitol and are a probable source of the mannitol found in cotton dust.     

Genetic and leaf-trait variability of Vinca minor at ancient and recent localities in Central Europe

In Central Europe, Vinca minor has been planted for centuries as an ornamental, medicinal and ritual plant. We asked how variability in genetic and leaf traits of V. minor at ancient localities differs from that at recently established localities sampled mainly in the Czech Republic. Using selected ISSR primers, we obtained two clusters that correspond well with locality history. In the recent cluster, we identified a certain degree of genetic variability, whereas the ancient cluster exhibited none. We recorded significant differences in leaf shape between the clusters. Genotypes with narrow leaves were more characteristic of recent localities. Although the ancient cluster showed no variability in ISSR primers, it did show variability in leaf traits, indicating that some of the morphologically expressed genetic variability cannot be detected using ISSR primers. All samples were diploids (2n = 46), with an identical relative DNA content. Samples from ancient localities, such as deserted medieval settlements and castles, probably descended from a single or a few related clones. This supports the hypothesis concerning the allochthonous character of V. minor in the Czech Republic.     

Chemotaxonomic significance of leaf alkanes in species of Ficus (Moraceae)

The alkane pattern of leaf waxes from 24 tropical Ficus species in Nigeria was determined by gas chromatography and gas chromatography–mass spectrometry. Of the 12 alkanes identified, hentriacontane and tritriacontane were the major components in all the species studied. The chemosystematic significance of leaf alkanes is discussed in Ficus for the first time. There is an indication that alkane occurrence in Ficus could provide useful information to the understanding of species variability.     

Single-Leaf Resolution of the Temporal Population Dynamics of Aureobasidium pullulans on Apple Leaves

The abundance of phylloplane microorganisms typically varies over several orders of magnitude among leaves sampled concurrently. Because the methods traditionally used to sample leaves are destructive, it has remained unclear whether this high variability is due to fixed differences in habitat quality among leaves or to asynchronous temporal variation in the microbial population density on individual leaves. We developed a novel semidestructive assay to repeatedly sample the same apple leaves from orchard trees over time by removing progressively more proximal ~1-cm-wide transverse segments. Aureobasidium pullulans densities were determined by standard leaf homogenization and plating procedures and were expressed as CFU per square centimeter of segment. The A. pullulans population densities among leaves were lognormally distributed. The variability in A. pullulans population densities among subsections of a given leaf was one-third to one-ninth the variability among whole leaves harvested concurrently. Sequential harvesting of leaf segments did not result in detectable changes in A. pullulans density on residual leaf surfaces. These findings implied that we could infer whole-leaf A. pullulans densities over time by using partial leaves. When this successive sampling regimen was applied over the course of multiple 7- to 8-day experiments, the among-leaf effects were virtually always the predominant source of variance in A. pullulans density estimates. Changes in A. pullulans density tended to be synchronous among leaves, such that the rank order of leaves arrayed with respect to A. pullulans density was largely maintained through time. Occasional periods of asynchrony were observed, but idiosyncratic changes in A. pullulans density did not contribute appreciably to variation in the distribution of populations among leaves. This suggests that persistent differences in habitat (leaf) quality are primarily responsible for the variation in A. pullulans density among leaves in nature.     

Exoamylase activity in vacuoles isolated from pea and wheat leaf protoplasts

Vacuoles isolated from pea (Pisum sativum), and wheat (Triticum aestivum) leaf protoplasts contained considerable activities of electrophoretically highly mobile exoamylases. Vacuoles from spinach (Spinacia oleracea) leaf and photoautotrophic Chenopodium rubrum suspension culture cell protoplasts were devoid of amylolytic activity. Endoamylase activity was in all cases associated primarily with the chloroplast.     

Intraspecific functional trait variability across different spatial scales: a case study of two dominant trees in Korean pine broadleaved forest

Intraspecific functional trait variability plays an important role in the response of plants to environmental changes. However, it is still unclear how the variability differs across three nested spatial scales (individual, plot, and site) and which determinants (climatic, soil, and ontogenetic variables) shape the trait variability. Along a latitudinal gradient in Korean pine broadleaved forest of northeast China, we quantified the extent of intraspecific variability of four functional traits in two dominant trees Pinus koraiensis and Fraxinus mandshurica at eight sites, including specific leaf area, leaf dry matter content (morphological traits) and leaf nitrogen content, leaf phosphorus content (physiological traits). Results showed a large trait variation within and between species (coefficient variation: 6.07–23.3%). The leaf physiological traits of F. mandshurica and morphological traits of P. koraiensis were more responsive at site scale, while the morphological traits of F. mandshurica and physiological traits of P. koraiensis were more responsive at individual scale. In addition, abiotic and biotic factors explaining functional trait variation differ markedly between the two tree species, with physiological trait of F. mandshurica being more associated with climate and soil, while traits variability in P. koraiensis was not affected by climate, soil, and ontogeny, except for leaf phosphorus content. Overall, we can predict that the physiological traits of broadleaved species tend to be more sensitive to environmental changes, while pines are more sensitive to competition. It is critical to determine which spatial scale and trait type should be taken into account in predictive models of vegetation dynamics.     

Variations in leaf characteristics of six species of Sagittaria (alismataceae) caused by various water levels

Plants grown from seeds of Sagittaria falcata, S. lancifolia, S. platyphylla, S. rigida, S. isoetiformis and S. papillosa were grown in water-saturated soil or soil submerged to 4.5, 12, 19.5 or 27 cm. Length and width of leaves and petiole lengths were measured at anthesis of the first flower on the first inflorescence produced by each plant. In general, leaf width and length were decreased by submergence, and petiole length increased. The species × water depth interaction was significant for emersed leaf width, leaf length and petiole length except for S. lancifolia leaf length and S. papillosa leaf length and width. These trends indicate genetic differences among, and variability within, taxa. Leaf width, leaf length and petiole length of plants growing in seed source populations were measured. The means from these measurements, when compared to those from experimental plants, indicate that both groups of plants respond similarly to variations in water depth.     

Separation of mesophyll protoplasts and bundle sheath cells from maize leaves for photosynthetic studies

Mesophyll protoplasts and bundle sheath strands of maize (Zea mays L.) leaves have been isolated by enzymatic digestion with cellulase. Mesophyll protoplasts, enzymatically released from maize leaf segments, were further purified by use of a polyethylene glycol-dextran liquid-liquid two phase system. Bundle sheath strands released from the leaf segments were isolated using filtration techniques. Light and electron microscopy show separation of the mesophyll cell protoplasts from bundle sheath strands. Two varieties of maize isolated mesophyll protoplasts had chlorophyll a/b ratios of 3.1 and 3.3, whereas isolated bundle sheath strands had chlorophyll a/b ratios of 6.2 and 6.6. Based on the chlorophyll a/b ratios in mesophyll protoplasts, bundle sheath cells, and whole leaf extracts, approximately 60% of the chlorophyll in the maize leaves would be in mesophyll cells and 40% in bundle sheath cells. The purity of the preparations was also evident from the exclusive localization of phosphopyruvate carboxylase (EC 4.1.1.31) and NADP-dependent malate dehydrogenase (EC 1.1.1) in mesophyll cells and ribulose 1,5-diphosphate carboxylase (EC 4.1.1.39), phosphoribulokinase (EC 2.7.1.19), and “malic enzyme” (EC 1.1.1.40) in bundle sheath cells. NADP-glyceraldehyde 3-phosphate dehydrogenase (EC 1.2.1.13) was found in both mesophyll and bundle sheath cells, while ribose 5-phosphate isomerase (EC 5.3.1.6) was primarily found in bundle sheath cells. In comparison to the enzyme activities in the whole leaf extract, there was about 90% recovery of the mesophyll enzymes and 65% recovery of the bundle sheath enzymes in the cellular preparations.     

Fungi isolated from tobacco leaves and brown-spot lesions before and after flue-curing

Discs of tissue excised from ripe nonflue-cured and flue-cured tobacco leaves, harvested on six dates and cultured on three selective media, yielded 21 and 24 genera of fungi, respectively. Of 5,094 fungi isolated from 3,240 pieces of nonfluecured leaf tissue, 89.5% comprised five genera, Alternaria, Cladosporium, Epicoccum, Trichoderma, and Nigrospora. Of 2,494 fungi isolated from 3,240 pieces of flue-cured leaf tissue, 70.9% were Alternaria, Cladosporium Epicoccum, Aspergillus, and Nigrospora. Flue-cured and nonflue-cured brown-spot lesions harvested at two locations yielded 12 and 14 genera of fungi, respectively. Alternaria, Penicillium, Phoma, and Stemphyllium comprised 91.5% of the 2,245 fungi isolated from noncured and 87.1% of the 1,118 fungi isolated from the cured lesions. The number and kinds of fungi obtained from diseased and healthy tissue were reduced but not eliminated by flue-curing.     

The expression of light-related leaf functional traits depends on the location of individual leaves within the crown of isolated Olea europaea trees

Background The spatial arrangement and expression of foliar syndromes within tree crowns can reflect the coupling between crown form and function in a given environment. Isolated trees subjected to high irradiance and concomitant stress may adjust leaf phenotypes to cope with environmental gradients that are heterogeneous in space and time within the tree crown. The distinct expression of leaf phenotypes among crown positions could lead to complementary patterns in light interception at the crown scale.Methods We quantified eight light-related leaf traits across 12 crown positions of ten isolated Olea europaea trees in the field. Specifically, we investigated whether the phenotypic expression of foliar traits differed among crown sectors and layers and five periods of the day from sunrise to sunset. We investigated the consequences in terms of the exposed area of the leaves at the tree scale during a single day.Key Results All traits differed among crown positions except the length-to-width ratio of the leaves. We found a strong complementarity in the patterns of the potential exposed area of the leaves among day periods as a result of a non-random distribution of leaf angles across the crown. Leaf exposure at the outer layer was below 60 % of the displayed surface, reaching maximum interception during morning periods. Daily interception increased towards the inner layer, achieving consecutive maximization from east to west positions within the crown, matching the sun’s trajectory.Conclusions The expression of leaf traits within isolated trees of O. europaea varies continuously through the crown in a gradient of leaf morphotypes and leaf angles depending on the exposure and location of individual leaves. The distribution of light-related traits within the crown and the complementarity in the potential exposure patterns of the leaves during the day challenges the assumption of low trait variability within individuals.     

Diversity of antagonistic bacteria isolated from medicinal plant Peganum harmala L.

The antimicrobial activity of plant extract of Peganum harmala, a medicinal plant has been studied already. However, knowledge about bacterial diversity associated with different parts of host plant antagonistic to different human pathogenic bacteria is limited. In this study, bacteria were isolated from root, leaf and fruit of plant. Among 188 bacterial isolates isolated from different parts of the plant only 24 were found to be active against different pathogenic bacteria i.e. Escherichia coli, Methicillin-resistant Staphylococcus aureus (MRSA), Enterococcus faecium, Enterococcus faecalis and Pseudomonas aeruginosa. These active bacterial isolates were identified on the basis of 16S rRNA gene analysis. Total population of bacteria isolated from plant was high in root, following leaf and fruit. Antagonistic bacteria were also more abundant in root as compared to leaf and fruit. Two isolates (EA5 and EA18) exhibited antagonistic activity against most of the targeted pathogenic bacteria mentioned above. Some isolates showed strong inhibition for one targeted pathogenic bacterium while weak or no inhibition for others. Most of the antagonistic isolates were active against MRSA, following E. faecium, P. aeruginosa, E. coli and E. faecalis. Taken together, our results show that medicinal plants are good source of antagonistic bacteria having inhibitory effect against clinical bacterial pathogens.