Trade-offs in the vertical distribution of zooplankton: ideal free distribution with costs?

Zooplankton vertical migratory patterns are a classic example of optimal habitat choice. We hypothesize that zooplankton distribute themselves vertically in the water column according to an ideal free distribution (IFD) with costs such as to optimize their fitness. In lakes with a deep-water chlorophyll maximum, zooplankton are faced with a trade-off, either experiencing high food (high reproductive potential) but low temperature (slow development) in the hypolimnion or high temperature and low food in the epilimnion. Thus, in the absence of fish predation (e.g. at night) they should allocate the time spent in the different habitats according to fitness gain dependent on the temperature gradient and distribution of food. We tested this hypothesis with a Daphnia hyalina x galeata clone in large indoor columns (Plön Plankton Towers) and with a dynamic energy budget model. In the tower experiments, we simulated a deep-water algal maximum below the thermocline with epilimnetic/hypolimnetic temperature differences of 2, 5 and 10 degrees C. Experimental data supported the model. We found a significantly larger proportion of daphniids in the hypolimnion when the temperature difference was smaller. Our results are consistent with the concept of IFD with costs originally developed for stream fishes. This concept can be applied to predict the vertical distribution of zooplankton in habitats where fish predation is of minor importance.     

Density‐Dependent Foraging and Interference Competition by Common Gartersnakes are Temperature Dependent

The ideal free distribution (IFD) predicts that optimal foragers will select foraging patches to maximize food rewards and that groups of foragers should thus be distributed between food patches in proportion to the availability of food in those patches. Because many of the underlying mechanisms of foraging are temperature dependent in ectotherms, the distribution of ectothermic foragers between food patches may similarly depend on temperature because the difference in fitness rewards between these patches may change with temperature. We tested the hypothesis that the distribution of Common Gartersnakes (Thamnophis sirtalis) between food patches can be explained by an IFD, but that conformance to an IFD weakens as temperature departs from the optimal temperature because fitness rewards, interference competition and the number of individuals foraging are highest at the optimal temperature. First, we determined the optimal temperature for foraging. Second, we examined group foraging at three temperatures and three density treatments. Search time was optimized at 27°C, handling time at 29°C and digestion time at 32°C. Gartersnakes did not match an IFD at any temperature, but their distribution did change with temperature: snakes at 20°C and at 30°C selected both food patches equally, while snakes at 25°C selected the low food patch more at low density and the high food patch more at high density. Food consumption and competition increased with temperature, and handling time decreased with temperature. Temperature therefore had a strong impact on foraging, but did not affect the IFD. Future work should examine temperature‐dependent foraging in ectotherms that are known to match an IFD.     

Vertical distribution of pelagial zooplankton in a middle-sized dimictic valley reservoir

Our observations indicate the vertical distribution of zooplankton and its seasonal changes in Dubník II reservoir (Slovakia) are determined mainly by the thermal regime of the reservoir, by transparency, and by fish and invertebrate predation. During periods of circulation, zooplankton vertical distribution in the whole water column was more homogeneous, whilst during summer temperature stratification zooplankton concentrated in the epilimnion — rotifers in higher layers than crustaceans. During summer stagnation a steep thermal gradient occurred at the boundary of the epi-and hypolimnion and low temperature and low dissolved oxygen in hypolimnion offered a refuge for Chaoborus flavicans larvae against fish, enabling coexistence of vertebrate and invertebrate predation. This evidence supports our previous findings concerning dominance of rotifers in zooplankton and representation of crustaceans by small-bodied species in the study reservoir. Steep thermal gradient and the presence of Chaoborus larvae caused very low zooplankton abundance in the lower part of the water column and a reduction of cladocerans refuges against fish to layers of thermocline or closely under thermocline where Daphnia cucullata and Daphnia parvula were found. Our previous assumptions about the high density of zooplanktivorous fish in Dubník II reservoir are supported by the fact that these small cladocerans are represented by smaller individuals in the upper layers and bigger individuals in deeper layers.     

Intraspecific variation in diet, growth, and morphology of landlocked Galaxias maculatus during its larval period: the role of food availability and predation risk

Food availability and predation risk have been shown to affect phenotypes during early life history of fishes. Galaxias maculatus, a small fish widely distributed around the southern hemisphere, clearly exhibits a complex trade-off between feeding and predation avoidance during growth over the larval period. We studied the effect of different environmental variables on diet, growth, mortality, and morphology through field surveys and data revision in the literature for limnetic G. maculatus larvae in five oligotrophic lakes of Patagonia. Both number of food categories and prey ingested by larvae were directly related to zooplankton density. Larval growth rate was related with zooplankton density and temperature. Lakes with high zooplankton densities and low predation risk had larvae with deeper bodies and shorter caudal peduncles, while in lakes with less food and high predation risk larvae were slender with shallower bodies and longer peduncles. Food availability and predation risk seem to operate on the swimming performance of G. maculatus larvae through the slenderness of the body and the length of the caudal peduncle. The observed phenotypic variation in growth and morphology could be a key feature that has allowed this species to successfully colonize a wide variety of environments in the southern hemisphere.     

The information of food distribution realizes an ideal free distribution: Support of perceptual limitation

Previous tests of ideal free distribution (IFD) under continuous input conditions have demonstrated that more profitable patches tend to be relatively underused compared to that predicted by the theory. We tested the hypothesis that competitors’ perceptual constraints of resource distribution cause this deviation from the IFD. A laboratory experiment was conducted to determine whether additional information on food distribution by a light cue that indicates the food input point improves the IFD theory’s fit to the distribution of clone red-spotted masu salmons (Salmonids),Oncorhynchus masou ishikawai, that had been conditioned to the light as a cue indicating the site with a higher input rate. In the treatments without a light cue, the distribution of fish was closer to a random pattern than an IFD. In contrast, in the treatments with light cue, the distribution of fish was closer to the expected value of an IFD rather than to a random pattern, supporting the perception-limit hypothesis. The distribution and the pattern of resource use by fish in the treatments without the light cue were best explained by the perception-limit model. Our results suggest that it is perceptual constraints that cause deviation from the IFD.     

Diel Vertical Migration of zooplankton in a eutrophic bay of Lake Victoria

We studied the Diel Vertical Migration (DVM) of several zooplankton taxa and an important zooplanktivore Rastrineobola argentea in a eutrophic bay of Lake Victoria for a total of 3 months during wet and dry seasons. Zooplankton were sampled twice a month at full moon and new moon. The zooplankton community of this lake was numerically dominated by cyclopoid copepods (>80%) of which 80% were juveniles. The composition of zooplankton was not significantly different (P > 0.05) for the different sampling months (November 2000, March 2001 and July 2001), but total zooplankton abundance was significantly lower (P < 0.05) in July (dry season) than during March or November (wet seasons). DVM behaviour was observed in some of the zooplankton groups including Tropocyclops spp., Thermocyclops spp., Thermodiaptomus galeboides and Diaphanosoma excisum. In these groups, we also observed that they were significantly (P < 0.05) more abundant at full moon than at new moon in some months, a pattern not seen in non-DVM groups. The amplitude of migration tended to be higher at new moon than full moon for all DVM zooplankton but not significantly so (P > 0.05). The zooplanktivore R. argentea exhibits typical DVM behaviour, perhaps to avoid visual predation itself, but it also increases the predation pressure on zooplankton in deeper waters. Feeding times for R. argentea peak just after dusk and dawn. For the copepod calanoid T. galeboides, there was a strong relationship (P < 0.05) between the amplitude of migration and midday (12:00) water transparency, suggesting that these zooplankton may have descended deeper on days with higher water transparency. In the absence of temperature and food gradients but with predation pressure from a migrating zooplanktivore, the depth of descent of zooplankton may be well associated with water transparency.     

Food sources and lipid retention of zooplankton in subarctic ponds

1. Subarctic ponds are seasonal aquatic habitats subject to short summers but often have surprisingly numerous planktonic consumers relative to phytoplankton productivity. Because subarctic ponds have low pelagic productivity but a high biomass of benthic algae, we hypothesised that benthic mats provide a complementary and important food source for the zooplankton. To test this, we used a combination of fatty acid and stable isotope analyses to evaluate the nutritional content of benthic and pelagic food and their contributions to the diets of crustacean zooplankton in 10 Finnish subarctic ponds. 2. Benthic mats and seston differed significantly in total lipids, with seston (62.5 μg mg^?1) having approximately eight times higher total lipid concentrations than benthic mats (7.0 μg mg^?1). Moreover, the two potential food sources differed in their lipid quality, with benthic organic matter completely lacking some nutritionally important polyunsaturated fatty acids (PUFA), most notably docosahexaenoic acid and arachidonic acid. 3. Zooplankton had higher PUFA concentrations (27–67 μg mg^?1) than either of the food sources (mean benthic mats: 1.2 μg mg^?1; mean seston: 9.9 μg mg^?1), indicating that zooplankton metabolically regulate their accumulation of PUFA. In addition, when each pond was evaluated independently, the zooplankton was consistently more ¹³C‐depleted (δ¹³C ?20 to ?33‰) than seston (?23 to ?29‰) or benthic (?15 to ?27‰) food sources. In three ponds, a subset of the zooplankton (Eudiaptomus graciloides, Bosmina sp., Daphnia sp. and Branchinecta paludosa) showed evidence of feeding on both benthic and planktonic resources, whereas in most (seven out of 10) ponds the zooplankton appeared to feed primarily on plankton. 4. Our results indicate that pelagic primary production was consistently the principal food resource of most metazoans. While benthic mats were highly productive, they did not appear to be a major food source for zooplankton. The pond zooplankton, faced by strong seasonal food limitation, acquires particular dietary elements selectively.     

Temperature and the effects of elemental food quality on Daphnia

1. We examined the responses of two species of Daphnia to changes in food phosphorus (P) content, with animals reared at three different water temperatures. Specifically, we measured mass‐specific growth rate (MSGR), body P content and respiration rate of Daphnia magna and Daphnia pulex acclimatised to 10, 17.5 and 25 °C and fed food carbon : phosphorus (C : P) ratios of either 150 or 500. 2. The responses of these three physiological variables to temperature–food quality interactions were species‐specific. There was a significant interactive effect of temperature and food quality on D. magna, as the greatest proportional effect of food quality on growth was observed at 10 °C and reductions in body P because of low food P content were relatively greater at 25 °C. These effects may reflect the temperature dependence of mechanisms that reduce elemental constraints associated with food quality in D. magna. By contrast, there were no interactive effects between food quality and temperature on MSGR, body P or mass‐specific respiration of D. pulex. 3. It thus appears that temperature can alter food quality effects on Daphnia but the nature of these alterations depends upon the daphniid species and its thermal adaptability. Significant temperature–food quality interactions will complicate efforts to understand zooplankton nutrition in nature and warrant future consideration.     

Daphnia performance on diets containing different combinations of high‐quality algae,heterotrophic bacteria,and allochthonous particulate organic matter

1. Filter‐feeding zooplankton in lakes feed on a mixture of phytoplankton, bacteria, and terrestrial particles and the proportions and nutritional value of these components can be highly variable. However, the extent to which food quality interacts with food quantity in affecting overall zooplankton performance is not yet fully resolved.
2. Here we performed laboratory feeding experiments to test how the performance of the unselective filter feeder Daphnia galeata was affected if various quantities of high‐quality food (the phytoplankton Rhodomonas) were diluted with low‐quality food such as heterotrophic bacteria (Pseudomonas) or terrestrial detritus particles (t‐POM) from the riparian zone of a boreal forest stream. We hypothesised: that increased proportions of bacteria and t‐POM in the diet will lead to decreased survival, somatic growth; and reproduction of Daphnia despite the presence of phytoplankton; that these effects are more pronounced for t‐POM than for heterotrophic bacteria; and that this response is stronger when phytoplankton availability is low.
3. Increasing the concentrations of Pseudomonas affected Daphnia survival, growth, and reproduction negatively when Rhodomonas was available at intermediate (0.37 mgC/L) and high (0.55 mgC/L) quantities. When Rhodomonas quantity was low (0.22 mgC/L), the addition of Pseudomonas generally resulted in better Daphnia performance except at very high concentrations of the bacterium relative to Rhodomonas. In contrast, the addition of t‐POM was detrimental for overall Daphnia performance at all Rhodomonas concentrations.
4. Daphnia performance was best described by a model including the interaction between food quality and quantity, with stronger negative effects on Daphnia when high‐quality food was supplemented with t‐POM than with Pseudomonas.
5. The results indicate that the ability of zooplankton to use low‐quality food is affected by the concurrent availability of high‐quality food. Furthermore, food sources that can be used but do not fulfil dietary requirements of grazers (e.g. bacteria), may still provide nutritional benefits as long as other complementary food components are available in sufficient quantities to compensate for biochemical deficiencies.
6. Therefore, we conclude that heterotrophic bacteria, but not peat layer t‐POM, can be an important component of zooplankton diets in boreal lakes, especially if the concentration of phytoplankton is low.

     

Diagnosis of invasive fungal disease in hospitalized patients with chronic obstructive pulmonary disease

Background

The role of culture-independent techniques (galactomannan, (1-3)-β-d-glucan) in the early diagnosis of invasive fungal diseases (IFD) is well assessed in hematological patients, but there are no clear conclusions in patients with chronic obstructive pulmonary disease (COPD).

Ontogenetic shift in dietary preference and low dietary overlap in rohu (<Emphasis Type="Italic">Labeo rohita</Emphasis>) and common carp (<Emphasis Type="Italic">Cyprinus carpio</Emphasis>) in semi-intensive polyculture ponds

In order to investigate ontogenetic changes in diet and diet overlap between rohu (Labeo rohita) and common carp (Cyprinus carpio) in polyculture ponds, food preferences of different size classes of these fishes were quantified. Rohu diet consisted of both phytoplankton and zooplankton, and there was a distinct ontogenetic shift in the relative importance of these food items. Zooplankton was the dominant food for rohu up to 20.6 cm total length (TL) and then gradually decreased in importance as fish grew. Phytoplankton was initially a minor component of rohu diet but gradually increased in importance and became the dominant food for rohu at 24.2 cm TL. Phytoplankton biovolume in rohu guts was positively correlated with fish size (TL). Chesson’s α indicated that rohu of all sizes preferentially selected Cladocera and avoided Cyanophyceae and Euglenophyceae. Young rohu initially preferred Rotifera and Copepoda but gradually switched to Bacillariophyceae and Chlorophyceae. Common carp diet consisted of phytoplankton, zooplankton, and benthic macroinvertebrates, but was dominated by benthic macroinvertebrates (63–92% of total diet). As common carp grew, the proportion of zooplankton ingested decreased and the proportion of benthic macroinvertebrates increased. Benthic macroinvertebrate biovolume in common carp guts was positively correlated with fish size. Common carp of up to 15.4 cm TL preferentially selected zooplankton, but common carp larger than 18.9 cm TL avoided this food item. Common carp of all sizes avoided phytoplankton. A low dietary overlap was found between rohu and common carp (Schoener overlap index: 0.08–0.35), probably due to ingestion of smaller quantities of zooplankton by the latter. Dietary overlap also decreased with increasing rohu and common carp size because of divergent ontogenetic shifts in dietary preferences of the two species.     

Expression and display of UreA of <Emphasis Type="Italic">Helicobacter acinonychis</Emphasis> on the surface of <Emphasis Type="Italic">Bacillus subtilis</Emphasis> spores

Background  

The bacterial endospore (spore) has recently been proposed as a new surface display system. Antigens and enzymes have been successfully exposed on the surface layers of the Bacillus subtilis spore, but only in a few cases the efficiency of expression and the effective surface display and have been determined. We used this heterologous expression system to produce the A subunit of the urease of the animal pathogen Helicobater acinonychis. Ureases are multi-subunit enzymes with a central role in the virulence of various bacterial pathogens and necessary for colonization of the gastric mucosa by the human pathogen H. pylori. The urease subunit UreA has been recognized as a major antigen, able to induce high levels of protection against challenge infections.     

Evaluation of DNA extraction methods for Bacillus anthracis spores isolated from spiked food samples

Aims

Nine commercial DNA extraction kits were evaluated for the isolation of DNA from 10‐fold serial dilutions of Bacillus anthracis spores using quantitative real‐time PCR (qPCR). The three kits determined by qPCR to yield the most sensitive and consistent detection (Epicenter MasterPure Gram Positive; MoBio PowerFood; ABI PrepSeq) were subsequently tested for their ability to isolate DNA from trace amounts of B. anthracis spores (approx. 6·5 × 10¹ and 1·3 × 10² CFU in 25 ml or 50 g of food sample) spiked into complex food samples including apple juice, ham, whole milk and bagged salad and recovered with immunomagnetic separation (IMS).

Methods and Results

The MasterPure kit effectively and consistently isolated DNA from low amounts of B. anthracis spores captured from food samples. Detection was achieved from apple juice, ham, whole milk and bagged salad from as few as 65 ± 14, 68 ± 8, 66 ± 4 and 52 ± 16 CFU, respectively, and IMS samples were demonstrated to be free of PCR inhibitors.

Conclusions

Detection of B. anthracis spores isolated from food by IMS differs substantially between commercial DNA extraction kits; however, sensitive results can be obtained with the MasterPure Gram Positive kit.

Significance and Impact of the Study

The extraction protocol identified herein combined with IMS is novel for B. anthracis and allows detection of low levels of B. anthracis spores from contaminated food samples.     

Genetic diversity of Clostridium perfringens type A isolates from animals, food poisoning outbreaks and sludge

Background  

Clostridium perfringens, a serious pathogen, causes enteric diseases in domestic animals and food poisoning in humans. The epidemiological relationship between C. perfringens isolates from the same source has previously been investigated chiefly by pulsed-field gel electrophoresis (PFGE). In this study the genetic diversity of C. perfringens isolated from various animals, from food poisoning outbreaks and from sludge was investigated.     

Top‐down control by an aquatic invertebrate predator increases with temperature but does not depend on individual behavioral type

Variation in behavioral traits among individuals within a population can have implications for food webs and ecosystems. Temperature change also alters food web structure and function, but potential interactions between warming and intraspecific behavioral variation are largely unexplored. We aimed to test how increased temperature, individual activity level of a predatory backswimmer (Anisops assimilis), and their interaction influenced the strength of top‐down control of zooplankton and phytoplankton. We used stable isotopes to support our assumption that the study population of A. assimilis is zooplanktivorous, and behavioral trials to confirm that activity level is a repeatable trait. We established freshwater microcosms to test for effects of warming, backswimmer presence, and backswimmer behavioral type on zooplankton density, zooplankton composition, and phytoplankton chlorophyll a. Top‐down control was present and was generally stronger at increased temperature. There was no indication that predator behavioral type influenced the strength of top‐down control either on its own or interactively with temperature. Predator behavioral type may not be associated with ecologically important function in this species at the temporal and spatial scales addressed in this study, but the links between behavior, temperature, and food web processes are worthy of broader exploration.     

The distribution pattern of critically short telomeres in human osteoarthritic knees

Introduction  

Telomere shortening is associated with a number of common age-related diseases. A role of telomere shortening in osteoarthritis (OA) has been suggested, mainly based on the assessment of mean telomere length in ex vivo expanded chondrocytes. We addressed this role directly in vivo by using a newly developed assay, which measures specifically the load of ultra-short single telomeres (below 1,500 base pairs), that is, the telomere subpopulation believed to promote cellular senescence.     

Geotaxis in the springtail Folsomia candida

Laboratory assays demonstrated the presence of a small positive geotaxis response to a 15° incline by Folsomia candida Willem (Collembola: Isotomidae). Negative phototaxis played an additive role to positive geotaxis when the experimental apparatus were exposed to light. The geotactic response was negatively affected by cold acclimation and decreasing surrounding temperature, but unaffected by food deprivation. The reduced mobility of springtails at low temperature did not seem to play a role in the corresponding decreased geotaxis. The low level of geotaxis and its further decrease with exposure to low temperature support an earlier suggestion that F. candida do not respond to cooling temperatures of fall by relocation to warmer deeper soil layers, but remain in the upper soil layers and increase their cold tolerance to continue foraging in the food‐rich upper soil layers.     

Zooplankton distribution in four ponds of different salinity: a seasonal study in the solar salterns of Sfax (Tunisia)

The seasonal distribution of metazooplankton and large-sized ciliates was studied in four ponds of different salinity in the solar salterns of Sfax (Tunisia). Total zooplankton abundance varied from 1 × 10³ to 4.7 × 10⁶ ind m^–3. Salinity had a negative effect on the abundance of copepods and rotifers which were absent in the pond with the highest salt concentration (180) in which the number of taxa was low and Artemia or the ciliate Fabrea largely dominated the zooplankton community. Temperature and the presence of Dunaliella salina as prey appeared as key factors in controlling the abundance of Artemia, while organic detritus appeared as important in the diet of Fabrea. Change in zooplankton species composition along the hypersaline gradient (40–90) was primarily related to salinity. However, our data suggest the importance of both the abundance and composition of food in the spatial and temporal variations of some zooplankton species.