Studies on a non-pyridine nucleotide dependent, membrane-bound L-(+)-glutamate oxidoreductase in Azotobacter vinelandii

A new type of membrane-bound oxidoreductase is described that carries out an oxidative deamination reaction that specifically involves L-glutamate. This enzyme is found in a subcellular fraction of $\text{Azotobacter}$$\text{vinelandii}$ strain 0. It can oxidize L?(+)-glutamate using molecular oxygen and produces α-ketoglutarate and NH₃ as end products. Neither NAD⁺ nor NADP⁺ are involved in this oxidation. The reaction is carried out by the membranous “R₃” fraction which is obtained from sonically ruptured resting cells by differential centrifugation. In addition to O₂, the electron acceptors that allowed for L-glutamate oxidation were phenazine methosulfate (PMS), K₃Fe(CN)₆, and 2, 6-dichloroindophenol (DCIP). This oxidation appears to be an integral part of the $\text{Azotobacter}$ electron transport system as the L-glutamate oxidase rate is also highly sensitive to known electron transport inhibitors, $\text{i.e.}$, 2-n-hydroxy-4-quinoline-N-oxide, cyanide, and thenoyltrifluoroacetone. Spectral absorption studies on the $\text{Azotobacter}$ R₃ electron transport fraction revealed that the cytochrome and flavoprotein (non-heme iron) components also could be reduced completely upon the addition of L-glutamate. Preliminary results suggest that this is a new type of L-glutamate oxidoreductase that does not as yet have an Enzyme Commission number and appears to be (a) a specific flavoprotein enzyme that is not a type of L-amino acid oxidase, (b) tightly bound (and functionally attached) to the $\text{Azotobacter}$ electron transport system, and (c) capable of carrying out specifically the oxidative deamination of L-glutamate in the absence of pyridine nucleotides.     

Control of puffing activity in three chromosomal segments of explanted salivary gland cells of Chironomus thummi by variation in extracellular Na+,K+ and Mg2+

Salivary glands of Chironomus thummi larvae were incubated in media composed of those $\text{NaCl}\text{KCl}\text{,}\text{MgCl}{}_2\text{NaCl}\text{or}\text{MgCl}{}_2\text{KCl}$ combinations and at concentrations which they tolerated without visible damage. Resulting changes in puffing activity were recorded for three chromosomal segments. Within certain combinatorial ranges $\text{NaCl}\text{KCl}\text{,}\text{MgCl}{}_2\text{NaCl}\text{and}\text{MgCl}{}_2\text{KCl}$ induced puffs in the three segments. Each inducing range is depicted as a ‘puff-inducing field’ for extracellular ion concentrations (IF^e) in a two-dimensional lattice. The IF^e_s are coherent, distinctly delineated and highly overlapping. At most places a transition from 0 to 100 % puff induction (induction of respective puff in each nucleus) depends on changes in media composition of 10–20 mM. Ion sensitivities of the three chromosomal segments were computed for NaCl/KCl/MgCl₂ combinations and were found to conform to actual puff-inducing capacities of selected NaCl/KCl/MgCl₂ media.     

Energy-liked reactions in photosynthetic bacteria. X. Solubilization of the membrane-bound energy-linked inorganic pyrophosphatase of Rhodospirillum rubrum.

The energy-linked membrane-bound inorganic pyrophosphatase of $\text{Rhodospirollum}$$\text{rubrum}$, G-9, has been solubilized with good yield from chromatophores using cholate in the presence of MgCl₂. The enzyme has been partially purified using ammonium sulfate fractionation and gel chromatography. After fractionation the enzyme requires phospholipid for activity. The solubilized enzyme is specific for PP_i and requires Mg²⁺ for activity as has been found for other PP_iases.     

Picosecond time-resolved study of MgCl2-induced chlorophyll fluorescence yield changes from chloroplasts

The MgCl₂-induced chlorophyll fluorescence yield changes in broken chloroplasts, suspended in a cation-free medium, treated with 3,-(3′,4′-dichlorophenyl)-1,1-dimethylurea and pre-illuminated, has been investigated on a picosecond time scale. Chloroplasts in the low fluorescing state showed a fluorescence decay law of the form exp $\text{?At}{}^{\mathrm{<mtext>1</mtext><mtext>2</mtext>}}$, where A was found to be 0.052 $\text{ps}{}^{\mathrm{<mtext>?1</mtext><mtext>2</mtext>}}$, and may be attributed to the rate of spillover from Photosystem II to Photosystem I. Addition of 10 mM MgCl₂ produced a 50% increase in the steady-state fluorescence quantum yield and caused a marked decrease in the decay rate. The fluorescence decay law was found to be predominantly exponential with a 1/e lifetime of 1.6 ns. These results support the hypothesis that cation-induced changes in the fluorescence yield of chlorophyll are related to the variations in the rate of energy transfer from Photosystem II to Photosystem I, rather than to changes in the partitioning of absorbed quanta between the two systems.     

Reversal of profilin inhibition of actin polymerization invitro by erythrocyte cytochalasin-binding complexes and cross-linked actin nuclei

Actin polymerization in 2 mM MgCl₂ is known to be inhibited by profilin. We found that small amounts of cytochalasin-binding complexes from human red cell membranes or actin nuclei cross-linked by $\text{p}\text{-}\text{NN′}$-phenylenebismaleimide can reverse the inhibitory action of profilin, leading to the rapid polymerization of the actin. This type of polymerization is inhibited by low concentrations of cytochalasin B. These results indicate that (a) the complexes and nuclei promote actin polymerization in the presence of profilin by providing sites onto which actin monomers can be added, and (b) profilin and cytochalasin B affect two distinct steps (i.e. nucleus formation and filament elongation, respectively) in the polymerization reaction.     

An x-ray crystallographic study of hemerythrin.

The non-heme iron protein, hemerythrin, has been crystallized from Themiste dyscritum. The crystals belong to the tetragonal space group P4 with unit cell dimensions $\text{a = b = 86.5}\text{A}\text{̊}\text{, c = 80.6}\text{A}\text{̊}$. A 2-fold molecular axis is suggested, implying that the asymmetric unit contains four subunits each with a molecular weight of 12,600.     

The NAD-linked α-glycerophosphate dehydrogenase of trypanosomes

NAD-linked α-glycerophosphate dehydrogenase plays a key role in the α-glycerophosphate cycle of $\text{Trypanosoma brucei}$. The activity in cell lysates was ample for this role. The enzyme was activated by salts (e.g. MgCl₂ or NaCl); it had a broad pH-optimum for the reduction of dihydroxyacetone phosphate centred at pH 7.4, with an apparent K_m of 0.5 mM; and it was weakly bound to particulate components of cell lysates. The enzyme from $\text{T. vivax}$ was similar to that of $\text{T. brucei}$. These trypanosomal enzymes resemble that of the trypanosomatid $\text{Crithidia fasciculata}$, but are rather different from the enzymes of mammals, birds and insects.     

Ouabain binding sites and the (Na+,K+)-ATPase of brain microsomal membranes

Beef brain microsomes bound approximately 180–220 pmoles of [³H]ouabain per mg of protein in the presence of either MgCl₂ and inorganic phosphate or ATP, MgCl₂ and NaCl. The ouabain-binding capacity and the ouabain-membrane complex were more stable than the (Na⁺,K⁺)-ATPase activity to treatment with agents known to affect the membrane integrity, such as, NaClO₄, sodium dodecyl sulfate, $\text{p-}\text{chloromercuribenzoate}$, urea. ultrasonication, heating, pH and phospholinase C.The presence of binding sites that were normally inaccessible to ouabain in brain microsomes was demonstrated. These sites appeared after disruption of microsomes with 2 M NaClO₄ as evidenced by increased binding of [³H]ouabain. These sites may be buried during the subcellular fractionation procedure and could be accessible in the intact cell.     

The effect of metyrapone on the 17,20-lyase from rat testis microsomes

A new and simple method was presented to isolate purified holoenzyme of $\text{E. coli}$ RNA polymerase. When a purified enzyme preparation was chromatographed on a DNA-cellulose column equilibrated with a buffer containing 10mM MgCl₂, holoenzyme was separated from core enzyme. Thus holoenzyme was eluted at 0.15M KCl and core enzyme at 0.25M KCl.     

A lysosomal factor that interconverts multiple forms of rat liver tyrosine aminotransferase.

A particulate factor of rat liver is described which interconverts three forms of rat liver cytosolic tyrosine aminotransferase $\text{in}$$\text{vitro}$ with no alteration of enzyme activity. The factor appears to be a heat- and pH-sensitive lysosomal protein. The interconversion process is stimulated $\text{in}$$\text{vitro}$ by 2.5 mM MgCl₂ and 2.5 mM ATP. Asparate aminotransferase multiple forms are also susceptible to $\text{in}$$\text{vitro}$ interconversion by the lysosomal factor. The properties of the factor explain several anomalous effects of $\text{in}$$\text{vitro}$ manipulation on the tyrosine aminotransferase forms which have been reported in the literature and implicate the form interconversion in the degradation of tyrosine aminotransferase.     

The effects of some cations and anions on spin labeled cytoplasmic membranes of bacillus subtilis

The effects of CaCl₂, MgCl₂, LaCl₃ and some alkali halides on $\text{Bacillus subtilis}$ cytoplasmic membranes were studied using stearic acid spin labels. The results indicate that two mechanisms are operating when these ions interact with $\text{B. subtilis}$ membranes. At low ionic concentrations (0 to 0.1 M) there is direct cation binding to the anionic membranes which in the case of Ca²⁺, Mg²⁺ and La³⁺, confers rigidity on the membranes and reaches saturation when the number of cations present equals the number of anionic sites on the lipids. At high concentrations there is a further effect on the membranes that parallels the known organizing/disorganizing effects that the ions studied have on water structure.     

Effects of sodium and magnesium cations on the “dark-” and light-induced chlorophyll a fluorescence yields in sucrose-washed spinach chloroplasts

The effects of Na⁺ and Mg²⁺ on the “dark” level (O level) and light-induced (P level) fluorescence in sucrose-washed spinach chloroplasts were studied. Low concentrations of NaCl (2–10 mM) cause a significant decrease in both the O and P levels in the chlorophyll fluorescence transient. The effect on the O level may reflect changes in the bulk chlorophyll a. At 77 °K NaCl increases the $\text{F735}\text{F685}$ emission peak ratio in dark-adapted and preilluminated chloroplasts, but has no significant effect on this ratio in sucrose-washed Photosystem II particles. This evidence is consistent with a sodium-induced excitation-energy distribution in favor of Photosystem I.In the presence of MgCl₂, with or without NaCl, there is a slight decrease in the O and P level fluorescence as compared with the salt-free control, but an increase as compared with the NaCl-treated sample. Magnesium appears to override the sodium-induced changes. At low temperatures in chloroplasts and Photosystem II particles, MgCl₂ has different effects on the $\text{F735}\text{F685}$ ratio apparently depending on the state of the membrane. Magnesium, however, always induces an increase in the $\text{F695}\text{F685}$ ratio. These results suggest that magnesium may influence Photosystem II reaction centers as well as energy distribution between the two photosystems.     

Salt- and solvent-dependent conformational transitions of ribo-CGCGCG duplex

The conformational transition of r(CpG)₃ was investigated under different chemical conditions. It was found that NaCl at a high concentration induced a partial transformation of the duplex into another conformation of RNA, whereas MgCl₂ and LiCl at concentrations of 2.3 and 5.4 M, respectively, caused the complete transition from A-RNA to the new conformation. ³¹P-NMR spectra measured in 5.0 M LiCl confirmed the conclusion that A-RNA was transformed into another conformation which at 70°C was apparently melted to single-stranded RNA. An increase in MgCl₂ concentration to 0.5 M caused an apparent increase in the stability of the duplex. It was established that apolar alcohols did not influence the duplex conformation but, at 78% ($\text{v}\text{v}$), they caused the aggregation of the duplex. Trifluoroethanol and urea at 78% and 10 M, respectively, caused the melting of the duplex due to the breakage of the hydrogen bonds within the duplex. It was suggested that r(CpG)₃ formed a right-handed helix which under extreme conditions was transformed into another conformation and it was presumed that it might be a left-handed Z-RNA.     

Iron content and degree of lipid peroxidation in liver mitochondria isolated from iron-loaded rats

1.The content of non-heme iron and the degree of lipid peroxidation were measured in liver mitochondria isolated from rats injected with either Jectofer (an iron-sorbitol-citric acid complex) or iron-nitrilotriacetate. 2. The sedimentation profiles of the mitochondria from controls and iron-treated rats as revealed by analytical differential centrifugation, indicated single population of mitochondria with $\text{s}{}_{\mathrm{4,B}}$ values of 13200± 560 S and 14200±590 S for controls and iron-loaded animals, respectively. In contrast, the sedimentation profiles of the acid phosphatase activity and the non-heme iron revealed marked polydispersities with at least three populations of particles for both controls and iron-loaded animals. 3. The mitochondria and iron-rich lysosomes were separated by density-gradient centrifugation in an isotonic medium of Percoll and sucrose. With this technique, the amount of non-heme iron in a mitochondrial fraction by differential centrifugation decreased from 69±28 nmol/mg protein to 5.6±1.1 nmol/mg protein and from 19.3±5.6 nmol/mg protein to 3.3±0.6 nmol/mg protein for Jectofer and iron-nitrilotriacetate injected rats, respectively. For control rats the amount of mitochondrial non-heme iron was about 2.7 nmol/mg protein both before and following density gradient centrifugation. The extra amount of non-heme iron still present in the purified mitochondrial fraction from iron-loaded rats, as compared to controls, was further characterized by the reactivity towards bathophenanthroline sulfonate. The results suggest that the extra iron was due to a small amount of either ferritin or hemosiderin still contaminaning the mitochondrial fraction. The amount of mitochondrial heme iron was the same in iron-loaded rats and controls. 4. The degree of lipid peroxidation in the mitochondria was estimated from the amount of malondialdehyde. The thiobarbituric acid method used for the quantitation of malondialdehyde was modified so that it was insensitive to variable amounts of iron present in the samples. No difference in the degree of lipid peroxidation was observed between the mitochondria from iron-loaded rats and controls. 5. In contrast to recent proposals (Hanstein, E.G. et al. (1981) Biochim. Biophys. Acta 678, 293–299), the present study showed that the amounts of non-heme iron and the degrees of lipid peroxidation are the same in mitochondria isolated from iron-loaded and control animals.     

Partial purification and characterization of rabbit-kidney brush-border (Ca2+ or Mg2+)-dependent adenosine triphosphatase

The ATPase activity of rabbit-kidney brush border can be activated almost equally well by Ca²⁺ and Mg²⁺ and, therefore, should be called (Ca²⁺ or Mg²⁺)-ATPase. This enzyme was solubilized and enriched 14-fold by the following steps: pretreatment with papain removed 69% of alkaline phosphatase without attacking a significant portion of the ATPase activity. Addition of 1% cholate removed 65% of the protein but no ATPase activity. The combination of cholate (0.5%) and deoxycholate (0.4%) solubilized most of the ATPase activity and most of the remaining protein. A column chromatography of the extract on Sepharose CL-2B resulted in an 6.5-fold increase of specific ATPase activity. A precipitation by ammonium sulfate (40% saturation) produced an additional 1.9-fold increase. The yield of this partial purification was 16%. Towards the nucleotides UTP and GTP the enzyme showed an activity slightly higher, and towards ITP and CTP an activity slightly lower than that with ATP. ADP was split about half as fast as ATP. AMP was not accepted by the enzyme. Replacing MgCl₂ by CaCl₂ resulted in an ATPase activity of 92% of that with MgCl₂. Using calcium- and magnesium-ATP as substrates, apparent $\text{K}{}_{\mathrm{<mtext>m</mtext>}}$ values of 0.22 and 0.33 mM, respectively, were obtained. The gel electrophoresis revealed the enrichment of a protein with an apparent $\text{M}{}_{\mathrm{<mtext>r</mtext>}}$ of 95 000 and also that of microvillus actin.     

Glycyl-tRNA synthetase: Evidence for two enzyme forms and sigmoidal saturation kinetics

Two forms of glycyl-tRNA synthetase from $\text{E}\text{.}\text{coli}$ have been resolved by DEAE-Sephadex chromatography. The two forms display different kinetic responses to increasing tRNA concentration. One gives a sigmoidal response and a Hill coefficient of 2.2 ± 0.2 while the other shows Michaelis-Menten kinetics. It is suggested that these data may indicate a role for glycyl-tRNA synthetase in the regulation of protein biosynthesis. During DEAE-Sephadex chromatography and ammonium sulfate fractionation the addition of substrates (glycine, ATP, and MgCl₂) has proven to be of significant value in resolving the two enzyme forms from each other and from contaminating proteins.     

Superoxide-dependent formation of hydroxyl radicals: Detection of hydroxyl radicals by the hydroxylation of aromatic compounds

A mixture of xanthine or hypoxanthine and xanthine oxidase generates the superoxide radical, O₂^$\text{?}$, and H₂O₂. In the presence of iron salts, O₂^$\text{?}$ and H₂O₂ can interact to produce the hydroxyl radical, OH·. Superoxide-dependent formation of OH· can be measured by its ability to hydroxylate salicylate as followed by an improved colorimetric assay described in this paper. A more accurate analysis of OH· can be obtained using its ability to hydroxylate phenol, the hydroxylated products being separated and measured after derivatization using gas-liquid chromatography and electron-capture detection. The derivatization and separation techniques are described.     

Cytochrome C553 from Desulfovibrio,vulgaris: Potentiometric characterization by optical and EPR studies

Cytochrome c₅₅₃ is a monohaemic c type cytochrome isolated from the sulfate reducing bacteria $\text{Desulfovibrio}$,$\text{vulgaris}$. Its midpoint potential value, determined by optical, EPR and polarographic studies is significantly lower than the midpoint potentials reported for other monohaemic cytochromes c (+ 10 mV instead of + 290 mV). In an attempt to study correlations between amino acid sequence, haem iron coordination and haem exposure in cytochromes c, cytochrome c₅₅₃ is compared with mitochondrial and bacterial c type cytochromes.     

Toluene dioxygenase: purification of an iron-sulfur protein by affinity chromatography

Toluene dioxygenase, from $\text{Pseudomonas}\text{putida}$, oxidizes toluene to (+)-$\text{cis}$-1(S),2(R)-dihydroxy-3-methylcyclohexa-3,5-diene. The oxygenase-component of this multienzyme system was purified to homogeneity by a two-step procedure that utilized affinity and ion exchange chromatography. The purified enzyme would oxidize toluene only in the presence of NADH, ferrous iron and partially purified preparations of NADH cytochrome c reductase and an iron-sulfur protein (ferredoxin_TOL). Spinach NADPH cytochrome c reductase and NADPH could substitute for the $\text{Pseudomonas}$ reductase and NADH. The molecular weight of the oxygenase-component was determined to be 151,000 and polyacrylamide gel electrophoresis in the presence of sodium dodecyl sulfate indicated that the enzyme is composed of two subunits with molecular weights of 52,500 and 20,800. The absorption spectrum showed maxima at 550 (Shoulder), 450, 326 and 278 nm and preliminary experiments have indicated the presence of 2 gram atoms of iron and 2 gram atoms of acid-labile sulfur per mole of protein. The results indicate that the oxygenase-component of the toluene dioxygenase enzyme system is an iron-sulfur protein that has been designated ISP_TOL.