Microbial respiration within a floodplain aquifer of a large gravel-bed river

1. Aerobic respiration, productivity and the carbon turnover rate of microbial biofilms were determined at hyporheic and phreatic sites in the Kalispell Valley alluvial aquifer along a transect extending 3.9 km laterally from the main channel of the Flathead River, a sixth order river in Montana (U.S.A.). The effect of experimentally increasing bioavailable organic carbon (acetate) on the respiration rate of biofilms in this carbon‐poor [dissolved organic carbon (DOC) < 2 mg L^?1] aquifer was also measured. 2. Chambers containing natural substratum were placed in‐situ and allowed to colonise for 20 weeks. After 4, 12 and 20 weeks, they were taken to the laboratory where oxygen flux was measured in a computer‐controlled, flow‐through respirometry system. 3. Respiration ranged from 0.01 to 0.33 mg O₂ dm^?3 h^?1 across sites, with means ranging from 0.10 to 0.17 mg O₂ dm^?3 h^?1. Productivity estimates ranged from 0.18 to 0.32 mg C dm^?3 day^?1 (mean 0.25, SE 0.03). The total organic carbon (TOC) of the microbial biofilms ranged from 18.2 to 29.7 mg C dm^?3. Turnover rate ranged from 3.2 to 5.6 year^?1 with a mean of 4.2 year^?1. 4. At the hyporheic site very close to the river, respiration did not significantly increase when samples were supplemented with labile carbon. Respiration increased with increasing DOC addition at hyporheic sites more distant from the river, suggesting a carbon‐limitation gradient within the hyporheic zone. Microbes at the phreatic site did not respond to increasing DOC addition, suggesting that the phreatic biofilm is adapted to low carbon availability. 5. Comparing the volume of the alluvial aquifer (about 0.7 km³) to that of the river benthic sediments (to 0.25 m depth, which amounts to about 1.6 × 10^?4 km³) within the Flathead Valley, leads to the conclusion that interstitial microbial productivity is orders of magnitude greater than benthic productivity. Alluvial aquifers are often voluminous and microbial production is an enormous component of ecosystem production in rivers such as the Flathead.     

Surface–subsurface water exchange rates along alluvial river reaches control the thermal patterns in an Alpine river network

1. Water temperature is a key characteristic of stream ecosystems that is gaining scientific and managerial relevance as maximum temperatures in aquatic ecosystems increase worldwide.
2. To assess the effect of surface–subsurface water exchange on stream water temperature patterns, four alluvial reaches in the Tagliamento River basin (NE Italy), constrained by geomorphic knickpoints at the upper and lower end, and two to four hyporheic flowpaths within each reach, were continuously studied during summer 2007 and winter 2007–08. Water temperature was continuously monitored at the upstream and downstream knickpoints of the floodplains, as well as at discrete upwelling areas within each reach. Discharge and vertical hydraulic gradient were measured along the alluvial reaches, and the residence time and chemistry of upwelling water were assessed four times during the study.
3. Discharge variation along the study reaches revealed that massive hyporheic exchange occurred in all sites, ranging from 21% in reach 2–52% in reach 1. End member mixing analysis showed little influence of ground water, as almost all upwelling water was freshly infiltrated hyporheic water. Importantly, hyporheic exchange flows shaped surface temperature at the upwelling locations in all study reaches, providing potential thermal refugia for aquatic biota. At sites with highest hyporheic flow rates, net temperature change was also reflected at the floodplain scale.
4. The magnitude of the thermal change along a hyporheic flowpath was not related to the flowpath length but to the estimated ²²²Rn water age. Reduction in the diel thermal amplitude by hyporheic flows rather than net temperature change, reduced temperature extremes. Therefore, restoration activities to create thermal refugia should consider the role of hyporheic flows and enhance the exchange between surface and hyporheic waters.     

Stability of interstitial crustacean communities in an isolated alluvial aquifer

The temporal stability of interstitial crustacean communities was investigated in relation to environmental variability in a perched aquifer, characterized by limited connection with surface waters. The author hypothesized that strong physico-chemical stability would enhance persistence and affect dominance patterns for groundwater fauna. Fifteen wells were sampled four times over a two-year period in order to assess the global stability of ground waters and to evaluate temporal changes in species assemblages. For each station, environmental patterns displayed only minor changes, while between-site differences were much larger. At the scale of the aquifer, strong temporal stability was found for groundwater physical and chemical variables. Interstitial crustaceans displayed diverse assemblages dominated by cyclopoid taxa. High persistence characterized community composition and structure (species relative abundance patterns, species richness, Shannon's diversity index) over the study period. Most well faunas were dominated numerically by a single species, whether micro- or macrocrustacean assemblages were considered. Faunal persistence observed in the aquifer was greater than that reported in many surface waters and was probably related to the strong environmental stability.     

Exoenzyme activities as indicators of dissolved organic matter composition in the hyporheic zone of a floodplain river

1. We measured the hyporheic microbial exoenzyme activities in a floodplain river to determine whether dissolved organic matter (DOM) bioavailability varied with overlying riparian vegetation patch structure or position along flowpaths. 2. Particulate organic matter (POM), dissolved organic carbon (DOC), dissolved oxygen (DO), electrical conductivity and temperature were sampled from wells in a riparian terrace on the Queets River, Washington, U.S.A. on 25 March, 15 May, 20 July and 09 October 1999. Dissolved nitrate, ammonium and soluble reactive phosphorus were also collected on 20 July and 09 October 1999. Wells were characterised by their associated overlying vegetation: bare cobble/young alder, mid‐aged alder (8–20 years) and old alder/old‐growth conifer (25 to >100 years). POM was analysed for the ash‐free dry mass and the activities of eight exoenzymes (α‐glucosidase, β‐glucosidase, β ‐N‐acetylglucosaminidase, xylosidase, phosphatase, leucine aminopeptidase, esterase and endopeptidase) using fluorogenic substrates. 3. Exoenzyme activities in the Queets River hyporheic zone indicated the presence of an active microbial community metabolising a diverse array of organic molecules. Individual exoenzyme activity (mean ± standard error) ranged from 0.507 ± 0.1547 to 22.8 ± 5.69 μmol MUF (g AFDM)^?1 h^?1, was highly variable among wells and varied seasonally, with the lowest rates occurring in March. Exoenzyme activities were weakly correlated with DO, DOC and inorganic nutrient concentrations. 4. Ratios of leucine aminopeptidase : β‐glucosidase were low in March, May and October and high in July, potentially indicating a switch from polysaccharides to proteins as the dominant component of microbial metabolism. 5. Principal components analysis indicated that there were patch effects and that these effects were strongest in the summer. 6. DOM degradation patterns did not change systematically along hyporheic flowpaths but varied with overlying forest patch type in the Queets River hyporheic zone, suggesting that additional carbon inputs exist. We hypothesise that the most likely input is the downward movement of DOM from overlying riparian soils. Understanding this movement of DOM from soils to subsurface water is essential for understanding both the hyporheic metabolism and the carbon budget of streams and rivers.     

Spatial and temporal dynamics of the microbial community in the Hanford unconfined aquifer

Pyrosequencing analysis of 16S rRNA genes was used to study temporal dynamics of groundwater bacteria and archaea over 10 months within three well clusters separated by ∼30 m and located 250 m from the Columbia River on the Hanford Site, WA. Each cluster contained three wells screened at different depths ranging from 10 to 17 m that differed in hydraulic conductivities. Representative samples were selected for analyses of prokaryotic 16S and eukaryotic 18S rRNA gene copy numbers. Temporal changes in community composition occurred in all nine wells over the 10-month sampling period. However, there were particularly strong effects near the top of the water table when the seasonal rise in the Columbia River caused river water intrusion at the top of the aquifer. The occurrence and disappearance of some microbial assemblages (such as Actinobacteria ACK-M1) were correlated with river water intrusion. This seasonal impact on microbial community structure was greater in the shallow saturated zone than deeper zone in the aquifer. Spatial and temporal patterns for several 16S rRNA gene operational taxonomic units associated with particular physiological functions (for example, methane oxidizers and metal reducers) suggests dynamic changes in fluxes of electron donors and acceptors over an annual cycle. In addition, temporal dynamics in eukaryotic 18S rRNA gene copies and the dominance of protozoa in 18S clone libraries suggest that bacterial community dynamics could be affected not only by the physical and chemical environment but also by top-down biological control.     

Spatial and temporal dispersion patterns of golden perch, Macquaria ambigua, larvae in an artificial floodplain environment

Golden perch larvae were stocked into a pond and inundated floodplain system in south-eastem Australia to determine movement patterns of the larvae onto and off the floodplain area. A total of 428 larvae were caught moving from the floodplain into the pond whereas only 18 were collected moving in the reverse direction. Thirty one larvae were caught at open water sites in the pond and floodplain, but only three were collected from sites on the floodplain which provided shade, timber or water flow. Transect samples from the pond also yielded more larvae than samples from floodplain transects, indicating a distinct spatial dispersion pattern in favour of the pond.
Spatial dispersion patterns of golden perch larvae appear to correspond with gradients in water quality between the pond and floodplain habitats. Stratification occurred in the pond but did not develop on the floodplain. Water on the floodplain was cooler, harder and contained less oxygen than surface water from the pond. Die1 oscillations occurred in water temperature, pH, dissolved oxygen, carbon dioxide and acidity, but there was no significant corresponding pattern in the distribution of larvae.
Dispersion of golden perch larvae between pond and floodplain habitats is not random, and may be actively influenced by local-scale variations in water quality.     

Protein accumulation and distribution in floodplain soils and river foam

Many processes contribute to nutrient transfer from terrestrial to aquatic systems, but in most cases the contribution of particular organisms is unknown. In this study, we explore how a Bradford‐reactive soil protein (BRSP) produced by arbuscular mycorrhizal fungi may provide nutrients to river ecosystems. Along a floodplain in Montana, we extracted BRSP from soils and related the protein concentrations to the age of soil surfaces. We identified BRSP in surface soils, as well as to a depth of 1.4 m, and found that the protein accumulates through time. We also detected BRSP in foam from five rivers in the western United States. Experiments were conducted that demonstrate that the protein may be leached or washed from soils and become a constituent of foam when mixed into turbulent water. We propose that terrestrially derived soil protein may enter rivers via erosion and leaching and serve as a nutrient source for aquatic organisms.     

Metabolic rates of a hypogean and an epigean species of copepod in an alluvial aquifer

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Zebra mussel (Dreissena polymorpha) seasonal colonization patterns in a sub-tropical floodplain river

Zebra mussel (Dreissena polymorpha) seasonal colonization patterns, growth and habitat preferences were determined in a sub-tropical floodplain river at the southern edge of its distribution in North America during 1995–96 (Atchafalaya River Basin, Louisiana). Zebra mussel movement into subtropical areas represents a major frontier for this species worldwide. The onset of adult zebra mussel colonies occurred when the minimum daily temperature dropped below 31 °C and dissolved oxygen levels rose above 6.5 mg l^-1 in the fall. By mid-winter, mussel populations were established at lateral distances >10 km from the main river channel. Mussel growth occurred throughout the winter with an increase in growth in April and May. Adult mortality occurred during May–August as dissolved oxygen levels declined and minimum daily temperature warmed above 29 °C in the floodplain and 32.5 °C in riverine sites. Limiting factors responsible for the seasonal pattern include temperature and dissolved oxygen tolerances experienced during summer months in the ARB. Summer water conditions apparently preclude establishment of resident zebra mussel populations in the Atchafalaya floodplain. Naturally occurring seasonal patterns in temperature and dissolved oxygen in floodplain rivers may have implications for the expansion of this exotic mollusk in warmwater systems with source colonies restricted to mainstem rivers and seasonal sinks in floodplain regions. This revised version was published online in July 2006 with corrections to the Cover Date.     

Regionally nested patterns of fish assemblages in floodplain lakes of the Magdalena river (Colombia)

We investigated if fish assemblages in neotropical floodplain lakes (cienagas) exhibit nestedness, and thus offer support to the managers of natural resources of the area for their decision making. The location was floodplain lakes of the middle section of the Magdalena river, Colombia. We applied the nested subset analysis for the series of 30 cienagas (27 connected to the main river and three isolated). All fish were identified taxonomically in the field and the matrix for presence-absence in all the lakes was used for the study of the pattern of nestedness. The most diverse order was Characiformes (20 species), followed by Siluriformes (19 species). Characidae and Loricaridae were the richest families. The species found in all the lakes studied were migratory species (17), and sedentary species (33). Two species (Caquetaia kraussii and Cyphocharax magdalenae) were widespread across the cienagas archipelago (100% of incidence). Nestedness analysis showed that the distribution of species over the spatial gradient studied (840 km) is significantly nested. The cienagas deemed the most hospitable were Simiti, El Llanito, and Canaletal. Roughly, 13 out of the 50 species caught show markedly idiosyncratic distributions. The resulting dataset showed a strong pattern of nestedness in the distribution of Magdalenese fishes, and differed significantly from random species assemblages. Out of all the measurements taken in the cienagas, only the size (area) and local richness are significantly related to the range of order of nested subset patterns (r=-0.59 and -0.90, respectively, at p < 0.01). Differential species extinction is suggested as the cause of a nested species assemblage, when the reorganized matrix of species occurring in habitat islands is correlated with the island area. Our results are consistent with this hypothesis.     

Factors limiting the distribution of the annual legumeKummerowia striata in a river floodplain

The annual legumeKummerowia striata often predominates in river floodplains forming a large population, but it is rare in gravelly areas adjacent to it. In order to clarify the factors limiting the distribution ofK. striata, its distribution pattern, germination and survival of seeds sown artificially were studied in the floodplain of the Ohta River. There was a positive correlation between the cover value ofK. striata and the percentage of fine particles (<0.2 mm) in the soil. In the winter season, there was a number of seeds (up to 47 seeds 20 cm⁻²) on the ground where aK. striata population had existed in the previous year, but they were very sparse in areas apart from the population. Only a small proportion of seeds sown in the gravelly area germinated. Many of the germinated individuals died before the first leaf unfolded, but the rest survived to maturity despite repeated floodings. Plants germinated in the gravelly area and those inoculated with soil from the gravelly area bore nodules, showing the presence ofRhizobium in the gravelly area. It was concluded that the colonization ofK. striata in the gravelly area was limited by slow dispersal, and by a low percentage of germination and high mortality in the early stage of establishment.     

Flood disturbance affects macroinvertebrate food chain length in an alluvial river floodplain

1. Characterising food-web responses to environmental factors could greatly improve our understanding of environment-biota relationships, and especially in floodplains where trophic interactions can be particularly important during phases of hydrological disconnection. The effects of floodplain hydrology and environmental attributes on structural aspects of biotic assemblages have been extensively studied, but responses at the functional level remain largely unknown.
2. Here, we characterised a central aspect of food-web architecture, the food chain length, as the maximum trophic position within 24 macroinvertebrate communities of parafluvial habitats in the Maggia river floodplain, in Switzerland. We investigated how the food chain length changed with different levels of habitat size, primary productivity and disturbance, the three factors potentially affecting food chain length in both theoretical and empirical studies.
3. We found that food chain length was lower in frequently flooded habitats and immediately after a flood. We also showed that trophic omnivory, where predators fed at lower trophic levels after flooding, and in more frequently flooded habitats, may explain these changes.
4. These findings show that trophic omnivory may explain how predators resist disturbance and are maintained in highly dynamic landscapes. More importantly, given that trophic omnivory may overall weaken trophic linkages and thus increase food-web stability, this suggests that it could be a key mechanism in sustaining biodiversity in river floodplains.

     

Distribution in space and time of Cladocera (Crustacea) in the alluvial sediments of the river Rhône (France)

Two stations in a polluted section of the Rhône River downstream of Lyon (France) were investigated during a five month' period. The samples (101 water and sediment) were taken by the Bou-Rouch method at 20, 50 and 100 cm depth in the sediments and at three different distances from the waterline. Twenty-six Cladocera species, belonging to five families were found. Most of them are known to live in the Rhône River system, as well in the surface water as in the underflow. Their community structure and the time and space distribution are described and discussed in relationship with other macroinvertebrate taxa and with the oxygen content of the pumped water.

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Zusammenfassung Zwei Probennahmestellen in einem stark verschmutzten Flußabschnitt der Rhône unterhalb von Lyon (Frankreich) wurden über einen Zeitraum von fünf Monaten untersucht. Die Proben (10 l Wasser und Feinsedimente) wurden mit einer Bou-Rouch-Pumpe in 20, 50 and 100 cm Tiefe im Kiesschotterbett und in drei verschiedenen Entfernungen vom Rhôneufer entnommen. Sechsundzwanzig Cladoceren-Arten aus fünf Familien wurden gefunden. Ihre Faunenzusammensetzung und die räumliche und zeitliche Verteilung wurden beschrieben und im Vergleich zu anderen gefundenen Macroinvertebraten-Taxa und zum Sauerstoffgehalt des Interstitial-Wassers diskutiert.

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Résumé Deux stations dans une zone polluée du Rhône en aval de Lyon (France) ont été étudiées pendant une période de cinq mois. Les échantillons (10 l d'eau et de sédiment) ont été pris avec la méthode selon Bou et Rouch à des profondeurs de 20, 50 et 100 cm dans les sédiments et à trois distances différentes du bord de l'eau. Vingt-six espèces de Cladocères appartenant à cinq familles ont été trouvées. La plupart d'entre elles sont déjà connues dans l'hydrosystème du Rhône, aussi bien en surface que dans le sous-écoulement. Leur structure de peuplement et leur distribution spatio-temporelle sont décrites et discutées en relation avec les autres taxons de macroinvertébrés trouvés trouvés et avec la concentration en oxygène de l'eau interstitielle.

     

Density-independent growth of floodplain river channel catfish Ictalurus punctatus

This study investigated the relative influence of biotic and abiotic factors on the growth of channel catfish Ictalurus punctatus in seven Mississippi floodplain rivers. The results indicate that growth was density-independent, being defined largely by abiotic conditions.     

Invertebrate seedbanks: rehydration of soil from an unregulated river floodplain in the south-eastern U.S.

1. We investigated the responsiveness of aquatic invertebrates to rehydration of floodplain soil in a south‐eastern U.S. river floodplain. Non‐inundated soil divots containing invertebrate seedbanks were collected from three floodplain elevations with different inundation histories (inundated for 2, 38, and 78% of a year), and subjected to rehydration (experimental inundation) in aquaria for 10 weeks. 2. Before rehydration, samples were collected to assess the initial density and composition of invertebrates in non‐inundated soil at each elevation. After rehydration, benthic samples were collected biweekly and emergence of aquatic insects was collected weekly from aquaria. 3. The surviving invertebrates were classified as aquatic, semi‐aquatic and terrestrial. Some aquatic invertebrates survived the non‐inundated period in an active state (e.g. Chironomidae and Ceratopogonidae), while others appeared to be dormant (e.g. Heptageniidae, microcrustaceans and Chironomidae). The response for several invertebrates (e.g. Chironominae, Oligochaeta, Collembola and terrestrial invertebrates) depended on the length of rehydration and inundation history. 4. The capacity of aquatic invertebrates to survive and recover was greatest at the most frequently inundated site. Despite variation in floodplain environments, both active and dormant invertebrates persisting in non‐inundated floodplain soil contributed to the floodplain assemblage during flooding. Thus, maintaining the connection between river and floodplain appears to be important in sustaining the invertebrate seedbank and its capacity to recover during inundation. River channelisation and regulation that severs this connection may result in a loss of diversity and abundance.     

Temporary connectivity: the relative benefits of large river floodplain inundation in the lower Mississippi River

Studies have demonstrated the importance of the synergistic relationship between large rivers and adjacent floodplain connectivity. The majority of large rivers and their associated floodplain have been isolated through a series of expansive levee systems. Thus, evaluations of the relative importance of floodplain connectivity are limited due to the aforementioned anthropogenic perturbations. However, persistent elevated river levels during spring 2011 at the confluence of the Mississippi River and Ohio River prompted the U.S. Army Corps of Engineers to create large gaps in the levee system producing an expansive floodplain (i.e. the New Madrid Floodway). Specifically, the New Madrid Floodway (approximately 475 km²) in southeast Missouri was created to divert part of the Mississippi River flow during catastrophic floods and thus alleviate flood risk on nearby population centers. Given the historic flooding of 2011, the floodway was opened and provided an unprecedented opportunity to evaluate the influence of floodplain inundation on fish species diversity, relative abundance, and growth. We sampled the floodplain and the adjacent river at three stratified random locations with replication biweekly from the commencement of inundation (late May) through early October. Overall, we found that species diversity, relative abundance, and growth were higher in the floodplain than the main river. Our data support previous examinations, including those outside North America, that suggest floodplain inundation may be important for riverine fishes. Given these apparent advantages of floodplain inundation, restoration efforts should balance benefits of floodplain inundation while safeguarding priority needs of humans.     

Methane turnover in exposed sediments of an Amazon floodplain lake

In the Amazon floodplain large areas of unvegetatedlake sediments are exposed to air during low water. Imeasured methane fluxes from exposed sediments of anAmazonian floodplain lake and assessed the regulatingfactors. Methane emission decreased from values between 10 and 40 mol CH₄ m^{minus 2} h^{minus 1}to zero when the sediments were exposed to air. Meanfluxes were about 3.7 mol CH₄m^{minus 2} h^{minus 1}. Fluxes were low compared tomeasurements taken from flooded habitats makingexposed lake sediments a negligible source ofatmospheric CH₄. This was mainly due to the lackof ebullition which governs methane flux in theflooded phase. Methane oxidation at the sedimentsurface consumed up to 75% of the methane enteringthe oxidised zone. Compared with CO₂ emissionmethane turnover was of minor importance for thecarbon budget of the sediments.     

Use of seasonal freshwater wetlands by fishes in a temperate river floodplain

This study examined the use of freshwater wetland restoration and enhancement projects ( i.e . non-estuarine wetlands subject to seasonal drying) by fish populations. To quantify fish use of freshwater emergent wetlands and assess the effect of wetland enhancement ( i.e . addition of water control structures), two enhanced and two unenhanced emergent wetlands were compared, as well as two oxbow habitats within the Chehalis River floodplain. Eighteen fish species were captured using fyke nets and emigrant traps from January to the beginning of June, with the most abundant being three-spined stickleback Gasterosteus aculeatus and Olympic mudminnow Novumbra hubbsi . Coho salmon Oncorhynchus kisutch was the dominant salmonid at all sites. Enhanced wetlands, with their extended hydroperiods, had significantly higher abundances of yearling coho salmon than unenhanced wetlands. Both enhanced and unenhanced emergent wetlands yielded higher abundances of non-game native fishes than oxbow habitats. Oxbow habitats, however, were dominated by coho salmon. Fish survival in the wetland habitats was dependent on emigration to the river before dissolved oxygen concentrations decreased and wetlands became isolated and stranding occurred. This study suggests that wetland enhancement projects with an outlet to the river channel appear to provide fishes with important temporary habitats if they have the opportunity to leave the wetland as dissolved oxygen levels deteriorate.