The synthesis of imidodiphosphoric acid derivatives as potential substrates in the pyrophosphorolysis reaction

The preparation conditions for dichlorophosphinylphosphorimidic trichloride were optimized. It was used in the synthesis of esters of imidodiphosphoric acid. The interaction of the trichloride with amines resulted in the corresponding amidodiphosphates rather than in the expected amides of imidodiphosphoric acid.Translated from Bioorganicheskaya Khimiya, Vol. 31, No. 1, 2005, pp. 96–102.Original Russian Text Copyright © 2005 by Zakirova, Golubeva, Shipitsin, Aleksandrova.     

The influence of diphosphonic analogues of inorganic pyrophosphate on activity of RNA-polymerases from the calf thymus

Diphosphonic analogues of inorganic pyrophosphate (PPi): methylene-, oxyethylidene-, aminomethylenediphosphonic acids as well as phosphonacetic, imidodiphosphoric bis- (phosphonomethyl)-phosphonic acids and methylenediphosphonic and phosphonic acid monoanhydrides were studied for their effect on the RNA-synthesizing activity of thymocytes. DNA-dependent RNA-polymerases I and II from the calf thymus nuclei were used for these studies. The analogues and PPi under study are shown to be inhibitors of both RNA-polymerases in nuclei from calf thymus and of purified RNA-polymerase II, which is more sensitive to the effect of diphosphonates. Methylenediphosphonic acid is the strongest inhibitor among the studied analogues, and imidodiphosphoric and phosphonacetic acids are the weakest inhibitors. Inhibition of purified RNA-polymerase II by diphosphonates has a complex character and includes both interaction of the PPi analogues with enzymes and chelating by them of Mn ions which are cofactors for RNA polymerase.     

Conversion of calciferols to isotachysterols by trifluoroacetic acid

The conversion of the calciferols to isotachysterols using trifluoroacetic acid is described. The yield of isotachysterol formed is greater by about 10% than that obtained with either antimony trichloride or acetyl chloride. Trifluoroacetic acid also produces a more intense absorption at 500 nm with calciferols than does antimony trichloride, however, the color is less stable.     

Reaction of uracil with hypochlorous acid.

The end products of the reaction of uracil with at least a 10-fold excess of aqueous hypochlorous acid at pH 7–8 were found to be trichloroacetic acid, carbon dioxide and nitrogen trichloride. Little formation of trichloroacetic acid was observed after 24 hours when the ratio of hypochlorous acid to uracil was less than 4:1. An intermediate in the reaction was found to be 5-chlorouracil. This was also degraded by hypochlorous acid to trichloroacetic acid.     

An efficient and highly selective deprotection of N-Fmoc-alpha-amino acid and lipophilic N-Fmoc-dipeptide methyl esters with aluminium trichloride and N,N-dimethylaniline.

A novel procedure for the deprotection of the carboxyl group of amino acid methyl esters is presented. The process is carried out by the reagent system aluminium trichloride/N,N-dimethylaniline that can successfully be applied to unblock the carboxyl moiety either of N-Fmoc-protected amino acid methyl esters and N-Fmoc-protected short dipeptide methyl esters. The chiralities of the optically pure amino acid or peptide precursors are maintained totally unchanged.     

Color reaction of cholesterol with trichloracetic acid and antimony trichloride. On the reaction mechanism

The color reaction of cholesterol with trichloracetic acid and antimony trichloride was examined to elucidate its reaction mechanism. 3,5-Cholestadiene, 3,3'bis(3,5-cholestadiene), 3,3'bis(2,4-cholestadiene), and cholesteryl trichloroacetate were isolated as the reaction products from the colored reaction mixture of cholesterol, and the first three compounds were found to be responsible for the coloration. It was assumed that cholesterol was dehydrated to 3,5-cholestadiene and 2,4-cholestadiene, which were dimerized to 3,3'-bis(3,5-cholestadiene) and 3,3'-bis(2,4-cholestadiene), respectively, and 3,3'-bis(2,4-cholestadiene) was in part converted to 3,3'-bis(3,5-cholestadiene) in trichloroacetic acid and antimony trichloride. The free radicals were detected in the colored solutions of choelsterol, 3,5-cholestadiene, 3,3'-bis(3,5-cholestadiene), and 3,3'-bis(2,4-cholestadiene), and inferred to be the radical cations of the steroids. The radical cation was postulated to be responsible with respect to the mechanism of the coloration. The relationship between the color reagent and the formation of dimeric steroids was described.     

The reactions of nitrogen trichloride with some tertiary phosphines

Nitrogen trichloride reacts with trimethyl-, triethyl-, tri-n-butyl-, and triphenylphosphine to yield dichlorophosphoranes of the general formula R₃PCl₂ plus dinitrogen. Nitrogen trichloride reacts with phosphorus trichloride to yield phosphorus pentachloride plus dinitrogen. Chloramine reacts with phosphorus trichloride to yield a mixture of dichlorophosphazene trimer and tetramer.     

Novel alpha-aminophosphonic acids. Design, characterization, and biological activity

Novel alpha-aminophosphonic acids are synthesized reacting 1,3-oxazolidin-2-one derivatives with formaldehyde and phosphorus trichloride. Treatment of N-(phosphonomethyl)oxazolidinones with aqueous NaOH gave the expected alpha-aminophosphonic acids. The oxidation of (2-hydroxy-1,1-dimethylethylamino)methyl phosphonic acid in the presence of CdO and water resulted in N-phosphonomethyl-2-methyl-1-propanoic acid. Their structures were proved by means of IR, 1H, 13C, and 31P NMR spectroscopy. The genotoxic, clastogenic, and antiproliferative effects of newly synthesized original aminophosphonic acids were investigated for the first time.     

The Synthesis of αβ Imidothymidine Diphospate

Abstract

It has been shown by many workers that nucleotides containing an ap methylene link have interesting biochemical properties compared to those containing an αβ 0x0 linkage.¹ In our laboratory af3 methylene thymidine triphosphate has been shown to be a more powerful inhibitorof thymidine kinase than thymidine triphosphate but a weaker inhibitor of ribonucleotide reductase and cytidine deaminase. We have been interested in examining the properties of the af3 imido analogue. Several routes to prepare the unknown ap imidothymidine triphosphate were unsuccessfully tried:

1. Reaction of 3′-O-Acetylthymidine with the tributylammonium salt of dicyclohexylcarbodiimide.

2. Reaction of 5′-O-tosylthymidine with the tributylammonium salt 3 of imidodiphosphoric acid in hot dimethylacetamide.

     

Type 2 Diabetic Rats on Diet Supplemented With Chromium Malate Show Improved Glycometabolism,Glycometabolism-Related Enzyme Levels and Lipid Metabolism

Our previous study showed that chromium malate improved the regulation of blood glucose in mice with alloxan-induced diabetes. The present study was designed to evaluate the effect of chromium malate on glycometabolism, glycometabolism-related enzymes and lipid metabolism in type 2 diabetic rats. Our results showed that fasting blood glucose, serum insulin level, insulin resistance index and C-peptide level in the high dose group had a significant downward trend when compared with the model group, chromium picolinate group and chromium trichloride group. The hepatic glycogen, glucose-6-phosphate dehydrogenase, glucokinase, Glut4, phosphor-AMPKβ1 and Akt levels in the high dose group were significantly higher than those of the model, chromium picolinate and chromium trichloride groups. Chromium malate in a high dose group can significantly increase high density lipoprotein cholesterol level while decreasing the total cholesterol, low density lipoprotein cholesterol and triglyceride levels when compared with chromium picolinate and chromium trichloride. The serum chromium content in chromium malate and chromium picolinate group is significantly higher than that of the chromium trichloride group. The results indicated that the curative effects of chromium malate on glycometabolism, glycometabolism-related enzymes and lipid metabolism changes are better than those of chromium picolinate and chromium trichloride. Chromium malate contributes to glucose uptake and transport in order to improved glycometabolism and glycometabolism-related enzymes.     

D-homoannulation of 17alpha,21-dihydroxy-20-keto steroids (corticosteroids)

Synthetic corticosteroids are widely used as anti-inflammatory agents. Mechanisms of their degradation continue to be studied. D-ring homoannulation is a well-known metabolic pathway for steroids in vivo. The rearrangement with aluminium trichloride of the commercial anti-inflammatory drugs hydrocortisone, cortisone and dexamethasone is here presented. The structures of the corresponding 17a-keto-17-hydroxy-D-homosteroids are established by mono- and two-dimensional NMR analysis. Inversion of the alpha-configuration of C-16 is observed in the Lewis acid assisted D-homoannulation of dexamethasone.     

Synthesis of 2-(nitromethyl)ornithine from ornithine mediated by cobalt(III)

Rac.-p-(tris(2-aminoethyl)amine-2-(nitromethyl)ornithine)cobalt(III) trichloride (2d) was obtained by a simple three-step procedure from ornithine using cobalt template chemistry. p-(Tris(2-aminoethyl)amine-ornithine)cobalt(III) trichloride (2a) was obtained from tris(2-aminoethyl)amine (tren) and (S)-ornithine in the presence of cobalt(II), which was oxidised to cobalt(III) during the reaction. Complex 2a was selectively oxidised with thionyl chloride-dimethyl formamide to p-(tris(2-aminoethyl)amine-dehydro-ornithine)cobalt(III) trichloride 2b. Complex 2c, in which reaction of thionyl chloride-dimethyl formamide has also occurred at the δ-amine of ornithine, was obtained at longer reaction times. Complex 2b reacted with nitromethane anion to give rac.-p-(tris(2-aminoethyl)amino-2-(nitromethyl)ornithine)cobalt(III) trichloride (2d). The amino acid rac.-2-(nitromethyl)ornithine (1b) was released by reducing complex 2d with aqueous ammonium sulfide. Complex 2d was expected to release 2-(nitromethyl)ornithine (1b) in hypoxic cells, where the amino acid could act as an inhibitor of ornithine decarboxylase. Preliminary data indicated that complex 2d was weakly cytotoxic in one cell type studied.     

Preparation and properties of hydrated uranium(III) complex chlorides. Part I. Uranium trichloride heptahydrate

The synthesis of uranium trichloride heptahydrate together with some of its structural, spectroscopic and magnetic properties is reported. The compound possesses the triclinic lattice of LaCl₃·7H₂O (space group P$\text{1}$). Controlled vacuum thermal dehydration of the substance enabled the preparation of the anhydrous trichloride in gram quantities. Magnetic susceptibilities of polycrystalline samples were measured by the Faraday method in the 6.5–295 K range. The uranium trichloride heptahydrate follows in this region the Curie-Weiss law with C = 1.0839 emu K mol^?1 and θ = ?32.7 K.     

Comparison of the Ruthenium hexammine trichloride method to other methods of chemical fixation for preservation of avian physeal cartilage

Summary Several methods of chemical fixation of avian physeal cartilage were compared. The Ruthenium hexammine trichloride method was compared to isotonic glutaraldehyde and neutral buffered formalin for light microscopy and paraffin embedment, and to two osmium-ferrocyanide methods and a combination of 1% glutaraldehyde and 4% formaldehyde for electron microscopy. Only the Ruthenium hexammine trichloride method prevented the loss of matrix proteoglycans and shrinkage of chondrocytes. In undecalcified paraffin-embedded cartilage, preservation of matrix and cellular detail was excellent, but Ruthenium hexammine trichloride interfered with Haematoxylin and Eosin staining. Glutaraldehyde gave more intense eosinophilia than neutral buffered formalin. Ultrastructurally, the Ruthenium hexammine trichloride method was the most consistent and gave the best overall fixation. Matrix elements and cellular and nuclear membranes were well preserved. It did result in vacuolation of the cytoplasm and mitochondria, and it increased granularity of the cytoplasm, chromatin, and rough endoplasmic reticulum. Other fixatives produced minimal vacuolation and finer granularity, but preservation was less consistent, cell/matrix contrast was often excessive, and they caused shrinkage of all chondrocytes. Large dilatations of the rough endoplasmic reticulum that appear to be cytoplasmic inclusions by light microscopy are described for the first time in avian cartilage.     

Organotin(IV) compounds as intramolecular transesterification catalysts in thermal depolymerization of poly(L-lactic acid) oligomer to form LL-lactide.

Mono-, di-, and tetraalkyl tin(IV) compounds were evaluated for the intramolecular transesterification reaction of the thermal depolymerization of poly(L-lactic acid) oligomer forming lactide by gas chromatography using a beta-cyclodextrin stationary phase capillary column. The most active catalyst was found to be monobutyltin trichloride (BuSnCl3) (8), which contains tin-halogen bonds, and the least effective was the coordinatively saturated monoorganotin derivative, monobutyltin tris(2-ethylhexanoate) (7). Coordination of the carbonyl group in the oligomer to the tin catalysts is an important factor influencing its activity.     

Bitter Taste of Oxidized Fatty Acids

A strong bitter taste was reported previously in highly autoxidized soybean oil, especially in the free fatty acid fraction. In the present study, for the elucidation of bitter substances in autoxidized oils, autoxidized linoleic acid was fractionated by silicic acid column chromatography, and the fraction with maximum peroxide value was treated with cysteine-ferric trichloride, reduced with sodium borohydride, oxidized with chromic acid and esterified with diazomethane. The results indicated that the bitter substances of autoxidized linoleic acid possessed a particular structure between the carboxyl group and other functional groups. To verify this fact, four oxidized fatty acids [ricinoleic(12-hydroxyoctadecenoic), 12-oxooctadecenoic, 9,12-dioxooctadecenoic, and dihydroxyoctadecenoic acids] were synthesized from castor oil, and their correlation to the bitter taste was investigated. The results showed that ricinoleic acid had a strong bitter taste, along with a strong stimulation, but this bitter taste was greatly reduced by methyl esterification. On the other hand, 12-hydroxy- and 9,10-dihydroxystearic acids were tasteless. From these results we conclude that the presence of an unsaturated bond, a carboxyl, a hydroxyl and/or peroxyl groups is a requisite for the bitterness of ricinoleic and autoxidized fatty acids.     

Metal-free Synthesis of Ynones from Acyl Chlorides and Potassium Alkynyltrifluoroborate Salts

Ynones are a valuable functional group and building block in organic synthesis. Ynones serve as a precursor to many important organic functional groups and scaffolds. Traditional methods for the preparation of ynones are associated with drawbacks including harsh conditions, multiple purification steps, and the presence of unwanted byproducts. An alternative method for the straightforward preparation of ynones from acyl chlorides and potassium alkynyltrifluoroborate salts is described herein. The adoption of organotrifluoroborate salts as an alternative to organometallic reagents for the formation of new carbon-carbon bonds has a number of advantages. Potassium organotrifluoroborate salts are shelf stable, have good functional group tolerance, low toxicity, and a wide variety are straightforward to prepare. The title reaction proceeds rapidly at ambient temperature in the presence of a Lewis acid without the exclusion of air and moisture. Fair to excellent yields may be obtained via reaction of various aryl and alkyl acid chlorides with alkynyltrifluoroborate salts in the presence of boron trichloride.     

Acid-catalysed dehydration of dehydroretinol

1. Treatment of dehydroretinol with hydrogen chloride in light petroleum or toluene-p-sulphonic acid in benzene produces a substance with u.v.-absorption maxima at 284, 296, 310, 350, 368, 388, 408 and 433nm. and antimony trichloride colour maximum at 620nm. This compound is tentatively named compound 433 after its absorption maximum at 433nm. 2. Treatment of dehydroretinol with ethanolic hydrogen chloride produces, besides 3-ethoxyanhydroretinol, some compound 433 also. 3. Compound 433 is present in several freshwater-fish liver oils. 4. The i.r. spectrum of compound 433 shows only a band attributable to a conjugated ethylenic system. 5. The course of changes that lead to the formation of compound 433 is discussed.     

Studies on the visual pigment and the indicator yellow analogues formed from 5,6-monoepoxyretinal

1. A new visual pigment has been isolated from retinae of rats maintained on 5,6-monoepoxyretinal for a period of 6 months. 2. Indicator yellow analogues from 5,6-monoepoxyretinal, namely 5,6-monoepoxyretinylidenemethylamine and 5,6-monoepoxyretinal oxime, have been prepared in a homogeneous state, the latter being obtained crystalline. 5,6-Monoepoxyretinylidenedimethylammonium iodide has also been prepared. 3. The spectroscopic properties, analytical data and antimony trichloride colour reactions of these indicator yellow analogues confirm their Schiff base structure. 4. The nature of chromogens formed from 5,6-monoepoxyretinylideneamino compounds with antimony trichloride and concentrated sulphuric acid is obscure although the chromogens resemble one another very closely. 5. 5,6-Monoepoxyretinylidenemethylamine and 5,6-monoepoxyretinylidenedimethylammonium iodide are very labile, whereas 5,6-monoepoxyretinal oxime is quite stable. 6. Hydrolysis of 5,6-monoepoxyretinylidenemethylamine as a function of pH reveals that, though 5,6-monoepoxyretinylidenemethylammonium ions are stable, the un-ionized compound readily hydrolyses to 5,6-monoepoxyretinal. This hydrolysis can be prevented by excess of un-ionized methylamine and hastened by formaldehyde. 7. The bathochromic shift in the λ_max. of the `acid form' of 5,6-monoepoxyretinylidenemethylamine is due to the formation of its ammonium salt. The spectrum of the `acid form' is identical with that of 5,6-monoepoxyretinylidenedimethylammonium iodide in ethanol. This is also evidence for the quaternary state of the nitrogen atom during the `acid shift' of 5,6-monoepoxyretinylidenemethylamine. 8. The significance of 5,6-monoepoxyretinal and the corresponding indicator yellow analogues in the formation and properties of a new visual pigment is discussed.     

Preservation of cartilage matrix proteoglycans using cationic dyes chemically related to ruthenium hexaammine trichloride.

We tested various cationic dyes chemically related to ruthenium hexaammine trichloride (RHT) [i.e., the RHT-cyclohexanedione complex (RHT-CC), pentaamine ruthenium N-dimethylphenylenediimine trichloride (PRT), tris-(bipyridyl)ruthenium (II) chloride (TRC), tris (bipyridyl) iron (II) chloride (TIC), and cobalt hexaammine trichloride (CHT)] for their effectiveness in precipitating cartilage matrix proteoglycans in situ. Dyes were introduced into media at the onset of processing and were present throughout both aldehyde fixation and osmium tetroxide post-fixation. Contrary to expectation, most of the dye-proteoglycan complexes generated and stable under aldehyde fixation conditions were found to be unstable during post-fixation despite the continuing presence of the dye. A similar phenomenon was also found for the cationic dyes commonly used for precipitation of proteoglycans in cartilage tissue sections (such as Acridine Orange, Alcian Blue, Azure A, Methylene Blue, and Ruthenium Red). Only two dyes, i.e., RHT and the newly tested RHT-CC, formed proteoglycan precipitates sufficiently stable to resist disruption and extraction during osmium tetroxide post-fixation. The latter may be particularly useful in semiquantitative analyses of proteoglycan content in unstained tissue sections owing to its intense brown-black color. For applications in which the osmium tetroxide post-fixation step may be omitted, TRC and PRT may also be valuable for semiquantitative histochemistry by virtue of their stable fluorescence and intense violet color signals, respectively.