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1.
A large‐scale phylogenetic study is presented for Cucujoidea (Coleoptera), a diverse superfamily of beetles that historically has been taxonomically difficult. This study is the most comprehensive analysis of cucujoid taxa to date, with DNA sequence data sampled from eight genes (four nuclear, four mitochondrial) for 384 coleopteran taxa, including exemplars of 35 (of 37) families and 289 genera of Cucujoidea. Maximum‐likelihood analyses of these data present many significant relationships, some proposed previously and some novel. Tenebrionoidea and Lymexyloidea are recovered together and Cleroidea forms the sister group to this clade. Chrysomeloidea and Curculionoidea are recovered as sister taxa and this clade (Phytophaga) forms the sister group to the core Cucujoidea (Cucujoidea s.n .). The nitidulid series is recovered as the earliest‐diverging core cucujoid lineage, although the earliest divergences among core Cucujoidea are only weakly supported. The cerylonid series (CS) is recovered as monophyletic and is supported as a major Cucujiform clade, sister group to the remaining superfamilies of Cucujiformia. Currently recognized taxa that were not recovered as monophyletic include Cucujoidea, Endomychidae, Cerylonidae and Bothrideridae. Biphyllidae and Byturidae were recovered in Cleroidea. The remaining Cucujoidea were recovered in two disparate major clades: one comprising the nitidulid series + erotylid series + Boganiidae and Hobartiidae + cucujid series, and the other comprising the cerylonid series. Propalticidae are recovered within Laemophloeidae. The cerylonid series includes two major clades, the bothriderid group and the coccinellid group. Akalyptoischiidae are recovered as a separate clade from Latridiidae. Eupsilobiinae are recovered as the sister taxon to Coccinellidae. In light of these findings, many formal changes to cucujiform beetle classification are proposed. Biphyllidae and Byturidae are transferred to Cleroidea. The cerylonid series is formally recognized as a new superfamily, Coccinelloidea stat.n. Current subfamilies elevated (or re‐elevated) to family status include: Murmidiidae stat.n. , Teredidae stat.n. , Euxestidae stat.n. , Anamorphidae stat.rev. , Eupsilobiidae stat.n. , and Mycetaeidae stat.n. The following taxa are redefined and characterized: Cleroidea s.n. , Cucujoidea s.n. , Cerylonidae s.n. , Bothrideridae s.n. , Endomychidae s.n. A new subfamily, Cyclotominae stat.n. , is described. Stenotarsinae syn.n. is formally subsumed within a new concept of Endomychinae s.n.  相似文献   

2.
Variation in the mitochondrial cytochrome b gene (1143 bp) was examined to estimate the phylogenetic relationships of taxa within the Peromyscus boylii species group. In addition, phylogenetic relationships among the aztecus, boylii, and truei species groups were addressed. Maximum-likelihood, neighbor-joining, and maximum-parsimony (weighted and equally weighted) analyses produced similar topologies with P. boylii, P. beatae, P. simulus, P. stephani, P. madrensis, P. levipes, and three undescribed taxa from western Mexico forming a monophyletic unit. At least two of the undescribed taxa from western Mexico potentially represent species. Members of the P. aztecus species group formed a clade separate from the P. boylii group and should be recognized as a distinct species group. P. sagax, P. polius, and P. pectoralis, formerly placed in the P. boylii species group, generally formed an unresolved polytomy with the P. truei, P. aztecus, and P. boylii species groups. P. attwateri formed a sister taxon relationship with members of the P. truei species group (P. difficilis and P. nasutus) and should be considered a member of this group. Members of the P. truei species group did not form a monophyletic unit, indicating that this species group is not monophyletic and may be composed of two assemblages.  相似文献   

3.
The phylogenetic relationships of nine species of freshwater sponges, representing the families Spongillidae, Lubomirskiidae, and Metaniidae, were inferred from analyses of 18S rDNA, cytochrome oxidase subunit I (COI) mtDNA, and internal transcribed spacer 2 (ITS2) rDNA sequences. These species form a strongly supported monophyletic group within the Demospongiae, with the lithistid Vetulina stalactites as the sister taxon. Within the freshwater sponge clade, the basal taxon is not resolved. Depending upon the method of analysis and sequence, the metaniid species, Corvomeyenia sp., or the spongillid species, Trochospongilla pennsylvanica , emerges as the basal species. Among the remaining freshwater sponge species, the spongillids, Spongilla lacustris and Eunapius fragilis , form a sister group to a clade comprised of the spongillid species, Clypeatula cooperensis , Ephydatia fluviatilis , and Ephydatia muelleri , and the lubomirskiid species, Baikalospongia bacillifera and Lubomisrkia baicalensis . C. cooperensis is the sister taxon of E. fluvialitis , and E. muelleri is the sister taxon of ( B. bacillifera + L. baicalensis ). The family Spongillidae and the genus Ephydatia are thus paraphyletic with respect to the lubomirskiid species; Ephydatia is also paraphyletic to C. cooperensis . We suggest that C. cooperensis be transferred to the genus Ephydatia and that the family Lubomirskiidae be subsumed into the Spongillidae.  相似文献   

4.
A new subfamily, Delturinae, is described to accommodate the loricariid catfish genera Delturus Egenmann & Eigenmann, 1889 and Hemipsilichthys Eigenmann & Eigenmann, 1889, a clade recently demonstrated to be the sister group of all remaining loricariids except Lithogenes . The genus Hemipsilichthys is restricted to three species, H. gobio (Lütken, 1874), its sister species H. papillatus Pereira et al ., 2000, and H. nimius Pereira et al ., 2003. Relationships among species of Delturus were not resolved and a new species, D. brevis , is described from the Rio Jequitinhonha basin in eastern Brazil. The geographical distribution of Delturinae, exclusively on the south-eastern Brazilian Shield, indicates that south-eastern Brazil acts as either a refugium for basal loricariid taxa or a point of origin for the Loricariidae. Lectotypes are designated for D. parahybae Eigenmann & Eigenmann, 1889 and Plecostomus angulicauda Steindachner, 1877. Keys are presented for subfamilies of Loricariidae and for genera and species of Delturinae. Diagnoses are provided for all delturine clades and species.  © 2006 The Linnean Society of London, Zoological Journal of the Linnean Society , 2006, 147 , 277–299.  相似文献   

5.
Python phylogenetics: inference from morphology and mitochondrial DNA   总被引:1,自引:0,他引:1  
We used nucleotide sequences from four mitochondrial genes and structural features of the mitochondrial control region, combined with a revised, previously published, morphological data set to infer phylogenetic relationships among the pythons. We aimed to determine which of two competing hypotheses of relationships of the genera Aspidites and Python best explains the evolutionary and bioegeographical history of the family. All analyses of the combined data recover a set of relationships in which (1) the genus Python is paraphyletic with the two east Asian species, P. reticulatus and P. timoriensis , as the sister lineage to the seven Australo-Papuan python genera. We support recognition of a distinct genus for the P. reticulatus  +  P. timoriensis clade; (2) the remaining species of the genus Python form a clade which is the sister lineage to the remainder of the family; (3) the genus Aspidites is embedded among the Australo-Papuan genera. The seemingly primitive characteristics of Aspidites may be better interpreted as reversals or specializations that have accompanied a switch to burrowing in this genus. Resolution of the relationships among the Australo-Papuan lineages is weak, possibly because of rapid diversification early in the history of the radiation. We assessed the tempo of the Indo-Australian python radiation using a maximum likelihood framework based on the birth–death process. We find strong support for elevated speciation rates during the period when Australia collided with the proto-Indonesian archipelago. The data support an origin for pythons outside Australia, followed by a radiation into Australia during the mid-Tertiary.  © 2008 The Linnean Society of London, Biological Journal of the Linnean Society , 2008, 93 , 603–619.  相似文献   

6.
We studied the phylogeny and systematics of the tribe Paragini (Diptera: Syrphidae) using morphological and molecular data. The paper presents separate parsimony analyses of both adult morphological characters and partial DNA sequence data from mitochondrial cytochrome c oxidase I and nuclear ribosomal 28S rRNA gene, as well as a combined analysis of all the data. The data set of morphological characters included some features of the male terminalia (i.e. shape of the ejaculatory apodeme; relative position of elements of the aedeagal complex; shape of surstylar apodeme; shape of the aedeagal apodeme) not previously used in the systematics of the Paragini. The trees obtained from separate parsimony analyses of molecular and morphological data produced almost identical topologies. Four lineages are supported by the combined data set, and we establish two new subgenera, i.e. Serratoparagus Vujić et Radenković subgen. nov., and Afroparagus Vujić et Radenković subgen. nov., and redefine Pandasyopthalmus Stuckenberg, 1954 stat. rev. and Paragus Latreille, 1804, stat. rev. The monophyly of the Pandasyopthalmus clade, including the species fitting neither of the current species groups ( jozanus -group) of Paragini, is established. Diagnoses of all known species groups are presented, including a new arrangement of almost all valid species of Paragini.  © 2008 The Linnean Society of London, Zoological Journal of the Linnean Society , 2008, 152 , 507–536.  相似文献   

7.
Abstract The monophyly of the aleocharine beetle tribe Hoplandriini is established and the phylogenetic relationships of sixteen genus-group taxa are resolved. Three primary lineages are recognized: the Ligulata + (( Platandria + Tetrallus ) + ( Paroplandria + ( Ditropandria + ( Omoplandria + ( Nosora + Tinotoma ))))) clade forms a sister group to the (( Hoplandria + undescribed species 5, 4, 6) + undescribed species 1, 2, 3) clade, and together form the sister group to Pseudoplandria . On the basis of phylogenetic inference, three subtribes are proposed within Hoplandriini. Hoplandriina is composed of Hoplandria s.l and two as yet undescribed genera from the New World. Platandriina, subtr.n., is composed of Ditropandria , Paroplandria , Platandria , Tetrallus , Omoplandria , Nosora and Tinotoma from the Nearctic, Neotropical, Oriental and Palearctic Regions. Pseudoplandriina, subtr.n., is composed of genus Pseudoplandria , primarily from the Oriental Region with one species from the Palearctic Region.  相似文献   

8.
A total of 104 osteological and external morphological features were examined in 13 species of Acestrorhynchus and 15 outgroup taxa to advance a hypothesis of relationships within the genus. Two most parsimonious hypotheses corroborate the monophyly of Acestrorhynchus but differ in the hypothesized relationships of Acestrorhynchus heterolepis . Three proposed supraspecific assemblages are at least partially correlated with groups of species previously diagnosed on the basis of colour pattern: (1) Acestrorhynchus britskii , Acestrorhynchus grandoculis , Acestrorhynchus microlepis , and Acestrorhynchus minimus ; (2) Acestrorhynchus falcirostris , Acestrorhynchus isalineae , and A. Acestrorhynchus nasutus ; and (3) Acestrorhynchus abbreviatus , Acestrorhynchus altus , Acestrorhynchus falcatus , Acestrorhynchus lacustris , and Acestrorhynchus pantaneiro . In one hypothesis A. heterolepis is proposed as the closest relative of the clade formed by A. falcirostris , A. isalineae , and A. nasutus , and in the alternative hypothesis it is proposed as a sister species of the clade formed by A. abbreviatus , A. altus , A. falcatus , A. lacustris , and A. pantaneiro . Relationships among species of the latter clade remain unresolved. Two independent episodes of reduction of body size are hypothesized to have occurred within the genus: one associated with the clade formed by A. grandoculis and A. minimus , and the other with the clade formed by A. isalineae and A. nasutus . © 2007 The Linnean Society of London, Zoological Journal of the Linnean Society , 2007, 151 , 691–757.  相似文献   

9.
10.
Variation in the mitochondrial cytochrome b gene (1143 bp) was examined to estimate the phylogenetic relationships of taxa within the Peromyscus boylii species group. In addition, phylogenetic relationships among the aztecus, boylii, and truei species groups were addressed. Maximum-likelihood, neighbor-joining, and maximum-parsimony (weighted and equally weighted) analyses produced similar topologies with P. boylii, P. beatae, P. simulus, P. stephani, P. madrensis, P. levipes, and three undescribed taxa from western Mexico forming a monophyletic unit. At least two of the undescribed taxa from western Mexico potentially represent species. Members of the P. aztecus species group formed a clade separate from the P. boylii group and should be recognized as a distinct species group. P. sagax, P. polius, and P. pectoralis, formerly placed in the P. boylii species group, generally formed an unresolved polytomy with the P. truei, P. aztecus, and P. boylii species groups. P. attwateri formed a sister taxon relationship with members of the P. truei species group (P. difficilis and P. nasutus) and should be considered a member of this group. Members of the P. truei species group did not form a monophyletic unit, indicating that this species group is not monophyletic and may be composed of two assemblages.  相似文献   

11.
Phylogenetic relationships within Collembola were determined through the cladistic analysis of 131 morphological characters and 67 exemplar taxa representing the major families of the group, with special emphasis on Poduromorpha. The results show that the order Poduromorpha is monophyletic and the sister group to the remaining Collembola, with Entomobryomorpha monophyletic and the sister group to the clade Neelipleona + Symphypleona. In Entomobryomorpha, Actaletidae is the sister group of the remaining families. In Poduromorpha, Tullbergiinae is monophyletic as well as Onychiurinae and the group Tetrodontophorinae + Onychiurinae which is the sister group of the remaining Poduromorpha; Tetrodontophorinae is paraphyletic; Onychiuridae is polyphyletic; Isotogastruridae is not an intermediate between Poduromorpha and Entomobryomorpha, it is the sister group of Tullbergiinae; Odontellidae is monophyletic and the sister group to the clade Neanuridae + Brachystomellidae; in Neanuridae, Frieseinae and the group Pseudachorutinae + Morulinae + Neanurinae are monophyletic; Morulinae is the sister group of Neanurinae; Pseudachorutinae is paraphyletic; Hypogastruridae is polyphyletic; Podura aquatica (Poduridae) is not 'primitive', it clusters with the genera Xenylla and Paraxenylla in Hypogastruridae. On the basis of these relationships and the position of the aquatic species, the most parsimonious hypothesis is a terrestrial edaphic origin for the springtails.  相似文献   

12.
13.
The monophyly of Agrotis Ochsenheimer in addition to the relationships among the South American species of the genus and the relationship between Agrotis and Feltia Walker are examined. A cladistic analysis was performed based on 45 terminals, with 28 ingroup and 17 outgroup taxa, and 126 characters (two continuous and 124 discrete) from adult morphology, including male and female genitalia. Parsimony analyses were performed under equal and implied weighting. Results support Agrotis as a monophyletic group, sister to the South American species of Feltia (Feltia tent.), and the latter being more closely related to Agrotis than to the ‘true’ Feltia. Species of Agrotis that branched off first (including the type species) have characters shared with both Feltia and Agrotis. South American species of Agrotis (with some proviso) form a clade that branched off later, with some weakly supported species groups that had been proposed in previous works. Biogeographical aspects of the group are discussed after optimizing species distributions on the tree. Trees obtained after analyses using implied weights show similar relationships to those under equal weights, particularly regarding Feltia tent., showing Feltia tent. plus Agrotis forming a monophyletic group, sister to the ‘true’ Feltia.  相似文献   

14.
Abstract. The Pollenia viatica species-group ( =pallida species-group) is defined and described. It consists of P.bicolor Robineau-Desvoidy, P.bulgarica Jacentkovsk, P.fulvipalpis Macquart, P.mediterranea Grunin, P.ruficrura Rondani, stat.rev., P.viatica Robineau-Desvoidy, stat.rev. (= P.pallida Rodendorf, syn.n.) and P.ponti sp.n. It is mono-phyletic, mainly on the basis of a synapomorphic ovipositor tip, and the vagabunda species-group is its sister group. A key to all species is provided, the terminalia of both sexes illustrated and all taxa redescribed. Lectotypes are designated for Pollenia bisulca Pandellé, P.ruficrura Rondani and P.viatica Robineau-Desvoidy. Pollenia ruficrura is removed from its current status as a nomen dubium. Pollenia bicolor and P.ponti are western Mediterranean species, the latter also occurs in Czechoslovakia. P.fulvipalpis is endemic to France and Channel Islands. P.ruficrura is known only from Corsica and Italy. P.mediterranea is an eastern Mediterranean species reaching east to Armenia. P.bulgarica is distributed from Hungary to Caucasus. P.viatica is widespread from France, Great Britain and Southern Scandinavia to Central Asia. All species are summer or autumn species, and seem to have only one generation each year. The immature stages and life-cycle of a species from Paris, France, named 'Pollenia rudis' by Keilin (1909, 1915) are tentatively assigned to P. viatica . It survives the winter as a first instar larva within the earthworm Allolobophora chlorotica Savigny.  相似文献   

15.
Plagiochila sect. Vagae is a large pantropical clade that is characterized morphologically by frequent terminal branching, vegetative distribution by propagules on the ventral surface of the leaves and a capsule wall with thickenings in all layers. Plagiochila corrugata from Brazil is characterized by strongly undulate, toothed leaf margins and represents the only known neotropical species of sect. Vagae with unispiral elaters. Plagiochila cambuena from Madagascar is distinguished by the same features. Maximum likelihood and parsimony analyses of 38 nrDNA ITS sequences of Plagiochila reveal P. corrugata and P. cambuena in a weakly (ML) to well (MP) supported monophyletic lineage within P.  sect.  Vagae . As an outcome of the morphological and molecular investigation, P. cambuena is relegated to the synonymy of P. corrugata. Plagiochila corrugata is placed in a Vagae -subclade with 11 further American species. The range of P. corrugata can be ascribed to long-range dispersal from the Neotropics rather than a Gondwanan distribution. Species from tropical Asia and Africa are placed at the base of the Vagae clade. Branch length within P.  sect.  Vagae points to a sudden radiation.  © 2004 The Linnean Society of London, Botanical Journal of the Linnean Society , 2004, 146 , 469–481.  相似文献   

16.
A cladistic analysis of forty-one species, belonging to ten genera, of the Cidariini sensu Herbulot from the Holarctic and the Indo-Australian areas, was performed using seventy-seven characters including larval and pupal data. Eight most parsimonious cladograms were found (length 398, CI 0.30, RI 0.70). The monophyly of the Cidariini is demonstrated, using selected species of Xanthorhoini sensu Herbulot as the outgroup. The relationships among the genera are as follows: ( Ecliptopera ( Eulithis ( Cidaria (( Plemyria ( Chloroclysta , Dysstroma ))(( Thera , Pennithera ) ( Heterothera ))))). This result suggests some taxonomic changes: Dysstroma Hübner, stat. rev. and Chloroclysta Hübner stat. rev. are sister taxa; Heterothera Inoue stat. rev. includes Viidaleppia Inoue, syn.n., Heterothera firmata (Hübner) comb.n. is transferred from Pennithera Viidalepp to Heterothera sensu lato . The results of confirmation and incongruence tests suggest that the characters from adult and immature stages exhibit the same evolutionary pattern. Thus the phylogeny derived from the combined data matrix does not give a misleading conclusion, even though there are many missing states in the larval data set.  相似文献   

17.
Abstract.  We examined the inter- and infrageneric relationships of Old World Meliponini with a near-complete sampling of supra-specific taxa. DNA sequences for the taxa were collected from four genes (mitochondrial 16S rRNA, nuclear long-wavelength rhodopsin copy 1 (opsin), elongation factor-1α copy F2 and arginine kinase). Additional sampling of New World taxa indicated that Trigona sensu lato is not monophyletic: Trigona from the Indo-Malayan/Australasian Regions forms a large clade distantly related to the Neotropical Trigona . A separate clade comprises the Afrotropical meliponines, and includes the 'minute' species found in the Afrotropical, Indo-Malayan and Australasian Regions. The Neotropical genus Melipona , by contrast with previous investigations, is not the sister lineage to the remaining stingless bees, but falls within the strongly supported Neotropical clade. These results constitute the framework for a revised classification and ongoing biological investigations of Meliponini. A single taxonomic change, Heterotrigona bakeri stat.n. , is proposed on the basis of sequence divergence.  相似文献   

18.
Platymiscium is a neotropical legume genus of forest trees in the Pterocarpus clade of the pantropical "dalbergioid" clade. It comprises 19 species (29 taxa), distributed from Mexico to southern Brazil. This study presents a molecular phylogenetic analysis of Platymiscium and allies inferred from nuclear ribosomal (nrITS) and plastid (trnL, trnL-F and matK) DNA sequence data using parsimony and Bayesian methods. Divergence times are estimated using a Bayesian method assuming a relaxed molecular clock (multidivtime). Within the Pterocarpus clade, new sister relationships are recovered: Pterocarpus + Etaballia, Inocarpus + Tipuana and Paramachaerium + Maraniona. Our results support monophyly of Platymiscium, which is resolved into three major clades, each with distinct geographic ranges and ecological preferences. Diversification in Platymiscium has been driven by habitat fragmentation, invasion of novel geographic regions, and ecological diversification, revealing general patterns of diversification in the neotropics. We hypothesize that Platymiscium arose in dry habitats of South America and radiated northward. The Amazon basin was invaded twice both within the last 5.6 My and Central America twice before the closure of the Isthmus of Panama. Divergence times of the P. pubescens complex, restricted to seasonally dry tropical forests of South America, support pre-Pleistocene divergence in this biome.  相似文献   

19.
Abstract.  The phylogeny of the species of the scarabaeid subgenus Serica (genus Serica MacLeay, 1819) was inferred from a parsimony analysis and the use of 117 morphological characters of adults. Successive weighting was employed to further evaluate the phylogenetic relationships, and the geographical changes in the distribution in certain lineages were explored. Four major lineages may be recognized from the strict consensus tree within the ingroup: (1) Calloserica ; (2) Gastroserica + Neoserica ; (3) Lasioserica ; and (4) Serica including the representatives of Taiwanoserica . Pachyserica proved to be monophyletic only after successive weighting based on the retention index. The taxa of Taiwanoserica are nested within the species of Serica . Consequently, Taiwanoserica ( stat.n. ) is ranked as a subgenus of Serica . The clade Serica (subgenus Serica ) comprised the majority of the species included in this study. Serica ( sensu stricto ) species of the Himalayas are a polyphyletic group. Several major younger clades of Serica ( sensu stricto ) are not restricted to just one geographical region, but cover widely distant ranges (such as the Himalaya and eastern Tibet). Dispersal is hypothesized multiple times from the Himalaya to eastern Tibet/Indochina and vice versa, and also between the Japanese islands and eastern Tibet. Several hypotheses are discussed for an important role of the entire Himalaya–south-eastern Tibet orogenic system for the evolution of the subgenus Serica . More recently, the progressive uplift of the Tibetan Plateau provided an efficient barrier to the westward dispersal of eastern Palaearctic species.  相似文献   

20.
A taxonomic revision of Pseudonereis (Polychaeta, Nereididae) shows that some of the described taxa are very similar in most morphological characteristics. The revision includes all ten taxa considered valid, and are redescribed from type material. Lectotypes are designated for Pseudonereis anomala Gravier, 1901, Pseudonereis noodti (Hartmann-Schröder, 1962) and Pseudonereis trimaculata Horst, 1924. The widely geographically distributed and well-known P. gallapagensis Kinberg, 1865 and P. variegata ( Grube, 1857 ) show striking morphological resemblance to less well-known taxa with similar distribution. Paragnath variation in populations of P. anomala is discussed relating to its geographical distribution. Pseudonereis trimaculata is recorded from Australia for the first time. Taxa belonging to Pseudonereis are predominantly tropical and subtropical. A cladistic analysis using parsimony is included to test for monophyly of Pseudonereis . A monophyletic clade including all Pseudonereis taxa is given low bootstrap support. This clade is supported by the synapomorphies: presence of paragnaths in closely spaced comb-like rows on the maxillary ring on the pharynx, and presence of p-bar paragnaths in Areas II–IV and VII–VIII. Several of the included taxa share the shield-shaped paragnath in Area VI, which serves to distinguish Pseudonereis spp. from Perinereis spp. Paragnaths of the type p-bars and shield-shaped bar is described for the first time; the latter character is different from the smooth bar-shaped paragnaths in Area VI as has previously been described in these taxa.  © 2007 The Linnean Society of London, Zoological Journal of the Linnean Society , 2007, 150 , 145–176.  相似文献   

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