Polyploidy in Aconitum subgenus Lycoctonum (Ranunculaceae)

Chromosome numbers and morphology in 22 populations belonging to 11 taxa of Aconitum subgenus Lycoctonum (Ranunculaceae) from China were studied. Some taxa were diploid, with 2 n  = 16, but four species and two varieties were found to be tetraploid, with 2 n  = 32. They are concentrated in the Hengduan Mountains region in south-west China, indicating that polyploidy could have played an important role in the speciation of the subgenus in this region, one of the areas of the world with a high concentration of endemic species. The relationships of some of the species are discussed.  © 2006 The Linnean Society of London, Botanical Journal of the Linnean Society , 2006, 150 , 343–353.     

Morphological phylogenetics of Puya subgenus Puya (Bromeliaceae)

Puya , a large genus mostly from South America, has been taxonomically divided into two subgenera: Puyopsis and Puya. The latter includes only eight species distributed mainly in Chile, extending to Argentina, Bolivia, and Peru. The species of subgenus Puya are recognized by the presence of a sterile apex of the inflorescence branches, whereas those of subgenus Puyopsis have fertile flowers all along the branches. The objectives of this article were to determine whether this diagnostic character was synapomorphic for subgenus Puya , and to explore the relationships between its species. Parsimony analyses were performed for 43 taxa and 93 morphological characters, 87 of which were discrete and six continuous. In the analysis that included all characters, a single most parsimonious tree was found that supported subgenus Puya by two synapomorphic character states, including the diagnostic character of a sterile inflorescence branch apex and a blooming pattern in which flowers open gradually from base to apex. The trees were better supported when the continuous characters were included. Further studies are suggested to resolve the infrageneric classification of Puya and the relationships of the species belonging to subgenus Puya .  © 2008 The Linnean Society of London, Botanical Journal of the Linnean Society , 2008, 156 , 93–110.     

Evolution of the perennial soybean polyploid complex (Glycine subgenus Glycine): a study of contrasts

Glycine subgenus Glycine , the sister group to the cultivated soybean and its progenitor, have received considerable study over several decades. The combination of biosystematic data and an extensive germplasm collection has provided a strong foundation for molecular systematic studies in the group, including those on allopolyploids. These studies have shown that the various polyploid taxa known from the subgenus are all part of a single large allopolyploid complex, linked by shared diploid genomes. Many elements of the complex have arisen recently, and most show evidence of recurrent origins. However, there are also many dissimilarities among even closely related polyploids. Polyploids differ from one another in such ways as number of origins, amount of allelic diversity harboured at different loci, bidirectional vs. unidirectional origins, retention of ribosomal gene homoeologues, success as measured by geographical range and abundance, and patterns of gene expression.  © 2004 The Linnean Society of London, Biological Journal of the Linnean Society , 2004, 82 , 583–597.     

Leaf epidermal features of Quercus subgenus Cyclobalanopsis (Fagaceae) and their systematic significance

Leaf epidermal features are important taxonomic features in Quercus. We studied leaf epidermal features of 91 species and one forma of Quercus subgenus Cyclobalanopsis using light and scanning electron microscopy. Trichome terminology in oaks was assessed and clarified, aiming to score the epidermal features accurately for genus‐wide comparison. Nine trichome types, anomocytic and cyclocytic stomatal apparatus, smooth layer and platelet epicuticular wax flakes, and two trichome base types were found in subgenus Cyclobalanopsis. The epidermal features revealed three main groups in subgenus Cyclobalanopsis. The epidermal features of Quercus s.l. were uniform, supporting recognition of Cyclobalanopsis as a subgenus of Quercus rather than as a separate genus. Most leaf epidermal features show a mosaic pattern, although their numerous variations offered valuable resources for species identification. The leaf epidermal features that can be used for identification of Quercus leaves are also discussed and summarized. © 2014 The Linnean Society of London, Botanical Journal of the Linnean Society, 2014, 176 , 224–260.     

Molecular phylogeny of the subgenus Holothuria (Selenkothuria) Deichmann, 1958 (Holothuroidea: Aspidochirotida)

The subgenus Selenkothuria comprises 12 species of tropical shallow water sea cucumbers that share morphological features, such as rods in the body wall and tube feet, modified tentacles for suspension feeding, and cryptic colours. The taxonomic status of this taxon has been controversial, but currently it is accepted as a subgenus of the genus Holothuria. Phylogenetic analyses of mitochondrial genes [cytochrome c oxidase subunit 1 (COI), 16S RNA] of ten species of Selenkothuria and related subgenera showed the polyphyly of this subgenus; monophyly was rejected by a likelihood ratio test. A geographical split divides the species of this subgenus into three different groups: one Indo‐West‐Pacific (IWP) group and two American groups. The IWP group is more closely related to Holothuria (Semperothuria) cinerascens and to other subgenera such as Roweothuria, Holothuria, and Vaneyothuria, whereas the two American groups are more closely related to each other and to some species of the subgenus Halodeima. These results suggest multiple parallel originations and diversification of ossicle morphology within the subgenus Selenkothuria. The current scheme of subgenera for the genus Holothuria is not supported, suggesting the need for a new classification. © 2012 The Linnean Society of London, Zoological Journal of the Linnean Society, 2012, 165 , 109–120.     

A new species of Ceratozamia (Zamiaceae, Cycadales) from Veracruz, Mexico

Ceratozamia huastecorum sp. nov. is from an isolated meseta or tepui-like mountain in the Huasteca region of northern Veracruz State, Mexico. It has affinity to C. morettii Vázq.Torres & Vovides from the Mexican transvolcanic mountain range, which lies over 200 km to the south. The most notable differences are in female cone colour, leaf and leaflet morphology and length. The specific epithet is chosen in honour of the Huasteca ethnic region of great cultural importance to northern Veracruz.  © 2003 The Linnean Society of London, Botanical Journal of the Linnean Society , 2003, 141 , 395–398.     

A synopsis of Goniothalamus species (Annonaceae) in Peninsular Malaysia, with a description of a new species

The species of Goniothalamus (Annonaceae) occurring in Peninsular Malaysia and Singapore are revised, updating the previous taxonomic treatment by James Sinclair, published in 1955. A total of 18 species is recognized, including a new species, G. tomentosus . Collections referrable to G. tomentosus were previously determined as ' G. marcanii '; examination of the types of G. marcanii reveals that the two taxa are not conspecific, however, and a new name is accordingly validated here. Goniothalamus tomentosus has closest affinities with the Javan/Sumatran species G. costulatus . Other important nomenclatural changes include the reduction of G. umbrosus to synonymy with G. tapis .  © 2003 The Linnean Society of London, Botanical Journal of the Linnean Society, 2003, 142 , 321−339.     

Molecular phylogeny of the genus Mus (Rodentia: Murinae) based on mitochondrial and nuclear data

The genus Mus encompasses at least 38 species divided into four subgenera: Mus , Pyromys , Nannomys and Coelomys . The subgenus Mus , which comprises the house mouse and related species, is by far the most extensively studied, although the subgenus Nannomys is the most speciose. Although the relationships within the subgenus Mus are rather well characterized, those between subgenera are still unclear. In the present study, phylogenetic analyses of the whole genus were performed using a larger species sample of Nannomys than in previous studies, and a nuclear gene (IRBP) in addition to mitochondrial data (cytochrome b and 12S rRNA). Members of the Acomyinae and Murinae were used as outgroups. Separate and combined analyses were performed with maximum parsimony, maximum likelihood and Bayesian methods, and divergence times were estimated. The results showed that the monophyly of the genus Mus and of each subgenus was strongly supported by the three genes and the combined analysis. The phylogenies derived from the three genes were on the whole congruent; however, several conflicting topologies were observed such as the relationships between the three Asian species of the subgenus Mus ( caroli , cervicolor and cookii ). Increasing the taxonomic sampling of Nannomys did not satisfactorily improve the resolution of relationships between the four subgenera. In addition, molecular calibrations indicate that the Mus and Nannomys radiation coincided with major environmental changes.  © 2005 The Linnean Society of London, Biological Journal of the Linnean Society , 2005, 84 , 417–427.     

Palynotaxonomy of Brazilian species of Polygala subgenus Hebeclada

This study used pollen morphology to address taxonomic controversies related to several species belonging to subgenus Hebeclada of the genus Polygala (Polygalaceae). According to the last traditionally accepted revision of this subgenus, it comprises 40 species. Nevertheless, a recent taxonomic treatment applying more comprehensive criteria reduced this number to only nine species. Our work focused on 15 traditionally accepted species that occur in Brazil, fourteen of which have been considered as only six species in this recent taxonomic study. Pollen grains from floral buds at pre‐anthesis were collected from herbarium specimens and analysed using both visible light and scanning electron microscopy. Most of the traditionally accepted species were distinguished by different combinations of several pollen‐related features, in particular colpi number (13 or 15), pollen size and shape, and endoaperture type (endocingulate or not) and arrangement (parallel or sinuous). The species accepted in the recent taxonomic treatment could not be discriminated by pollen characters. © 2008 The Linnean Society of London, Botanical Journal of the Linnean Society, 2008, 157 , 609–619.     

Comparative morphology of seeds of four closely related species of Aristolochia subgenus Siphisia (Aristolochiaceae, Piperales)

The primary purpose of this study was to determine whether morphological divergence has occurred in seeds of species in a subclade of Aristolochia subgenus Siphisia . Thus, we compared seed mass, surface area, and wings (presence or absence), embryo shape and state, and embryo length to seed length (E:S) ratio in A. californica Torr., endemic to California, A. macrophylla Lamk. and A. tomentosa Sims of eastern USA, and A. manshuriensis Komarov of eastern Asia. We also compared capsule length and number of seeds per capsule in the three US species. All four species have linear, underdeveloped embryos, but for the other morphological features statistically significant differences occurred among the taxa. However, none of the seed morphological features differed between the eastern North American species A. macrophylla and its eastern Asian sister species A. manshuriensis.   © 2005 The Linnean Society of London, Botanical Journal of the Linnean Society , 2005, 148 , 433–436.     

Phylogenetic relationships within Plantago (Plantaginaceae): evidence from nuclear ribosomal ITS and plastid trnL-F sequence data

A molecular phylogenetic study of Plantago L. (Plantaginaceae) analysed nucleotide variation in the internal transcribed spacers (ITS) of nuclear ribosomal and plastid trnL-F regions. Included are 57 Plantago species, with two Aragoa species as the ingroup and three Veronica species as the outgroup. Phylogenetic analysis using maximum parsimony identified five major clades, corresponding to the taxonomic groups Plantago subgenera Plantago, Coronopus, Psyllium, Littorella and Bougueria . Aragoa is sister to genus Plantago . Plantago subgenus Littorella is sister to the other subgenera of Plantago . The results are in general correlated with a morphological phylogenetic study and iridoid glucoside patterns, but Plantago subgenus Albicans is paraphyletic and should be included in Plantago subgenus Psyllium sensu lato to obtain a monophyletic clade with six sections. Plantago section Hymenopsyllium is more closely related to section Gnaphaloides than to section Albicans . Plantago subgenus Bougueria is sister to subgenus Psyllium s.l. section Coronopus in Plantago subgenus Coronopus is subdivided in two series. Only some of the sections can be resolved into series. DNA variation within genus Plantago is high, a result that would not have been predicted on the basis of morphology, which is relatively stereotyped. If we calibrate a molecular clock based on the divergence of P. stauntoni , endemic to New Amsterdam in the southern Indian Ocean, we calculate the time of the split between Plantago and Aragoa to be 7.1 million years ago, which is congruent with the fossil record.  © 2002 The Linnean Society of London, Botanical Journal of the Linnean Society , 2002, 139 , 323–338.     

Phyllanthus section Choretropsis (Euphorbiaceae) in Brazil

Section Choretropsis genus Phyllanthus (Euphorbiaceae) is formed by plants whose branches are modified into phylloclades. Despite the suitable characteristics of phylloclades within the Phyllanthus genus, the systematics of these species are poorly understood. Morphological data are presented here to allow future revision of this taxonomic group. The section is represented by nine species distributed in South America, eight of them endemic to Brazil. Our taxonomic studies distinguish the species and propose the synonymization of nine varieties of P. klotzschianus and two varieties of P. flagelliformis based on vegetative and reproductive characters. The diversity of branching and the morphology of phylloclades are discussed.  © 2006 The Linnean Society of London, Botanical Journal of the Linnean Society , 2006, 150 , 131–164.