CO2浓度增加对长白山森林土壤甲烷氧化影响

大气CO2浓度升高可能对森林土壤的甲烷(CH4)氧化速率产生影响.本文采用开顶箱技术,对连续6年高浓度CO2（500 μmol·mol-1）处理的长白山森林典型树种蒙古栎树下土壤CH4氧化速率进行研究,并利用CH4氧化菌的16S rRNA特异性引物以及CH4单加氧酶功能基因引物分析了土壤中CH4氧化菌的群落结构与数量.结果表明： CO2浓度增高后,生长季土壤甲烷氧化量与对照和裸地相比分别降低了4%和22%;基于16S rRNA特异性引物的DGGE分析表明,CO2浓度增高导致两类甲烷氧化菌的多样性指数降低;CO2浓度增高对土壤中Ⅰ类甲烷氧化菌数量无显著影响,而使土壤中Ⅱ类甲烷氧化菌数量显著减少,功能基因pmoA拷贝数与对照和裸地相比分别降低了15%和46%.CO2浓度增高导致森林土壤甲烷氧化菌数量与活性降低,土壤含水量的增加可能是导致这一现象的主要原因.     

长白山阔叶红松林不同深度土壤CH4氧化研究

采集长白山阔叶红松林下不同深度的暗棕色森林土壤,在实验室条件下测定其对高低浓度CH4的氧化。结果表明,土壤氧化CH4的能力随深度变化明显;5～15cm土层具有最大CH4氧化活性,在400ppmv CH4浓度下此土层土壤最大氧化速率可达3．3nmolCH4·h^-1·g^-1 dw;25cm以下土层基本没有CH4氧化活性;因0～5cm土层土壤含有高浓度NH4^+抑制了CH4氧化菌的活性,所以此层土壤对CH4吸收能力下降。     

温度对土壤氧化大气CH4的影响

讨论了温度对土壤氧化大气CH4的影响及其机理。当温度较低时土壤也具有一定的氧化大气CH4的能力,两者具有很高的相关关系,但是由于CH4氧化菌对大气CH4具有很强的亲和力以及大气CH4氧化所需活化能较低,因此土壤氧化大气CH4对温度的敏感度远低于产CH4,导致温度系数Q10较小。当大气CH4和O2扩散进入土壤的速率等于土壤中CH4和O2消耗的速率时,大气CH4氧化达到最大值,此时的土壤温度就是CH4氧化的最佳温度。如果温度继续升高并大于最佳温度,由于CH4氧化菌无法与利用O2能力更强的硝化细菌和其它微生物竞争利用土壤空气中有限的O2,使得土壤中CH4氧化菌的繁殖和活性降低。这一作用机理的提出较好地解释了为什么随着温度升高土壤氧化大气CH4能力呈低高低的态势。     

不饱和土壤CH4的吸收与氧化

不饱和土壤是已知唯一的 CH4 生物壑。综述了不饱和土壤 CH4 的吸收、氧化过程及其影响因素。不饱和土壤中 CH4 氧化的临界浓度低 ,因而甲烷氧化菌可氧化大气 CH4 并将其当作唯一的碳源和能源。土壤 CH4 吸收率与土壤湿度通常呈负相关关系。土壤湿度过高 ,大气 CH4 和 O2 向土壤中扩散受阻 ;或土壤湿度过低引起水分胁迫均导致甲烷氧化菌活性下降。NH 4对土壤中 CH4 氧化的抑制作用可归结为 NH3和 CH4 在甲烷单氧酶水平上的竞争、由氧化作用向硝化作用的转移以及 NH 4氧化生成的 NO- 2 的毒性。NH 4对 CH4 氧化的抑制作用与土壤有效氮含量成正比。各类氮肥对 CH4 氧化抑制作用 :化肥 >有机肥 ;铵态氮肥 >尿素。 NO- 3对 CH4 氧化没有抑制效应。阳离子代换量 (CEC)高的土壤 NH 4对 CH4 氧化的抑制作用轻。 CH4 氧化菌对大气 CH4 的高亲和力及 CH4 氧化所需较低的活化能导致其温度系数 Q1 0 较小。地温较低时 ,土壤氧化 CH4 的能力随温度升高而升高。当地温高于 CH4 氧化的最佳温度时 ,CH4 氧化菌难以与硝化细菌及其它微生物竞争利用土壤空气中的 O2 ,导致其活性降低。甲烷氧化菌对 p H值变化不敏感。团粒结构较好的壤土可保护 CH4 氧化菌免受干扰。未受干扰的森林土壤 CH4 氧化率的峰值一般出现在亚表     

内蒙古锡林河流域主要类型草原土壤中CH_4和CO_2浓度的变化

于 1999年生长季对内蒙古锡林河流域主要类型草原土壤中 CH4和 CO2 浓度进行测定 ,结果表明 :CH4浓度沿土壤剖面逐渐降低 ,而且不同土壤深度之间差异显著 ,而 CO2 浓度呈现出沿土壤剖面增加的趋势。草甸草原、羊草 (L eymus chinesis)草原和大针茅 (Stipa grandis)草原土壤中 CH4的浓度差异显著 ,季节变化明显 ,但是三类草原土壤中 CO2 浓度变化不大。测定结果还表明 :一定时间尺度上 ,放牧对草原土壤中 CH4和 CO2 的浓度没有显著影响。     

鼎湖山主要森林土壤CO2排放和CH4吸收特征

研究了鼎湖山生物圈保护区马尾松林、混交林和季风常绿阔叶林(季风林)在2000~2001年期间土壤CO2排放和CH4吸收特征。季风林、混交林和马尾松林土壤CO2排放速率在研究期间的平均值分别为(kgCO2-C·hm-2·d-1):18.6±2.6,20.5±3.7和17.8±3.8,土壤CH4吸收速率则分别为(gCH4-C·hm-2·d-1):-5.5±1.8,-3.3±1.6和-7.7±1.8。土壤CO2排放速率和土壤CH4吸收速率在三种森林类型中均表现明显的季节性变化,且其季节性变化根据森林类型和年份不同而异。总的来说,土壤CO2排放速率在所有森林中均呈现夏季最高而冬季最低的变化,土壤CH4吸收速率的季节性变化则相反,基本上表现为冬季最高而夏季最低的变化。三种森林土壤的CO2排放速率和CH4吸收速率在两观测年间的差异均不显著。土壤CO2排放速率在不同森林类型间的差异也不显著,但土壤CH4吸收速率在马尾松林显著高于混交林。在两观测年中,土壤CO2排放速率与土壤CH4吸收速率之间在季风林呈现显著的负相关关系,在混交林和马尾松林中它们之间也趋向呈负相关关系,但未达显著水平。土壤CO2排放速率与土壤温度之间在季风林呈现显著的指数正相关关系,但在其余森林(混交林和马尾松林)中它们之间的关系则不明显。     

FACE系统处理三年后淹水条件下土壤CH4和CO2排放变化

采用淹水培养实验（25（C）,在实验室CO2浓度和高CO2浓度（1000μlL^-1）条件下,研究了稻麦轮作FACE系统运行3a后FACE处理和大气CO2浓度（Ambient）处理土壤CO2和CH4排放的差异。实验结果表明：经过FACE处理后,土壤有机碳含量较Ambient处理提高11%。在实验室和高CO2浓度下淹水培育60d,FACE处理土壤CO2累积排放量较Ambient处理土壤分别增加35%和22%,CH4累积排放量分别是Ambient处理土壤的2.6倍和2.3倍。高CO2浓度下培养,显著促进FACE和Ambient处理土壤的CO2排放量（p〈0.01）,促进CH4排放量,但未达到统计显著水平（p〉0.05）。由此说明,大气CO2浓度升高可能直接影响土壤有机碳的转化速率和CO2及CH4的排放。     

内蒙古锡林河流域主要类型草原土壤中CH4和CO2浓度的变化

 于1999年生长季对内蒙古锡林河流域主要类型草原土壤中CH4和CO2浓度进行测定,结果表明：CH4浓度沿土壤剖面逐渐降低,而且不同土壤深度之间差异显著,而CO2浓度呈现出沿土壤剖面增加的趋势。草甸草原、羊草(Leymus chinesis )草原和大针茅(Stipa grandis)草原土壤中CH4的浓度差异显著,季节变化明显,但是三类草原土壤中CO2浓度变化不大。测定结果还表明：一定时间尺度上,放牧对草原土壤中CH4和CO2的浓度没有显著影响。     

长期不同施肥下水稻土甲烷氧化能力及甲烷氧化菌多样性的变化

稻田内源甲烷的氧化是稻田甲烷减排的重要途径。而甲烷氧化菌是土壤中甲烷氧化的主要施动者,在长期不同施肥条件下,土壤微生物群落的演变是否影响到土壤甲烷氧化菌群落结构及其活性,进而影响到田土壤CH4向大气的实际排放强度还不清楚。为此,选择太湖地区一个长期肥料试验的稻田土壤为研究对象,分析长期不同肥料施用对土壤甲烷氧化能力的影响及其与土壤中甲烷氧化菌群落结构变化的可能关系。结果表明,长期不同的施肥措施下稻田土壤对甲烷的氧化能力产生了明显差异,伴随着土壤中甲烷氧化菌（MOBI和MOBII）的基因群落多样性的显著变化。长期单一施用氮肥为主的化肥显著降低了土壤对甲烷的氧化能力,同时显著降低了稻田土壤甲烷氧化菌的多样性和丰富度;不同施肥下甲烷氧化菌多样性的变化与土壤的甲烷氧化能力的变化趋势相一致。因此,研究显示长期不同施肥处理下甲烷氧化菌群落结构的改变可能是引起水稻土甲烷氧化能力变化的一个主要因素,有机无机配合施用可以明显降低稻田土壤甲烷的大气释放潜能。但长期不同施肥处理下甲烷氧化菌活性的变化还有待于进一步研究。     

湿地碳排放及其影响因素

湿地生态系统在全球碳循环中起着重要作用.湿地独特的土壤、水文和植被条件,使得其在低氧环境下能不断累积碳,并同时释放大量温室气体——CH4和CO2,因此湿地的碳排放近年来成为全球气候变化研究关注的重点问题.湿地的土壤状况、水文条件及植被类型的不同导致湿地CH4和CO2的排放具有极强的时空变异性.土壤温度与CH4和CO2排放呈正相关关系;水位条件对湿地温室气体的排放有一定影响,在一定范围内,土壤的厌氧环境导致CH4排放量增大,CO2排放量减小;植被影响到温室气体产生、氧化和排放各个方面,因物种而异.     

Structure and function of methanotrophic communities in a landfill-cover soil

In landfill-cover soils, aerobic methane-oxidizing bacteria (MOB) convert CH(4) to CO(2), mitigating emissions of the greenhouse gas CH(4) to the atmosphere. We investigated overall MOB community structure and assessed spatial differences in MOB diversity, abundance and activity in a Swiss landfill-cover soil. Molecular cloning, terminal restriction-fragment length polymorphism (T-RFLP) and quantitative PCR of pmoA genes were applied to soil collected from 16 locations at three different depths to study MOB community structure, diversity and abundance; MOB activity was measured in the field using gas push-pull tests. The MOB community was highly diverse but dominated by Type Ia MOB, with novel pmoA sequences present. Type II MOB were detected mainly in deeper soil with lower nutrient and higher CH(4) concentrations. Substantial differences in MOB community structure were observed between one high- and one low-activity location. MOB abundance was highly variable across the site [4.0 × 10(4) to 1.1 × 10(7) (g soil dry weight)(-1)]. Potential CH(4) oxidation rates were high [1.8-58.2 mmol CH(4) (L soil air)(-1) day(-1) ] but showed significant lateral variation and were positively correlated with mean CH(4) concentrations (P < 0.01), MOB abundance (P < 0.05) and MOB diversity (weak correlation, P < 0.17). Our findings indicate that Methylosarcina and closely related MOB are key players and that MOB abundance and community structure are driving factors in CH(4) oxidation at this landfill.     

Molecular characterization of methanotrophic communities in forest soils that consume atmospheric methane

Methanotroph abundance was analyzed in control and long-term nitrogen-amended pine and hardwood soils using rRNA-targeted quantitative hybridization. Family-specific 16S rRNA and pmoA/amoA genes were analyzed via PCR-directed assays to elucidate methanotrophic bacteria inhabiting soils undergoing atmospheric methane consumption. Quantitative hybridizations suggested methanotrophs related to the family Methylocystaceae were one order of magnitude more abundant than Methyloccocaceae and more sensitive to nitrogen-addition in pine soils. 16S rRNA gene phylotypes related to known Methylocystaceae and acidophilic methanotrophs and pmoA/amoA gene sequences, including three related to the upland soil cluster Alphaproteobacteria (USCalpha) group, were detected across different treatments and soil depths. Our results suggest that methanotrophic members of the Methylocystaceae and Beijerinckiaceae may be the candidates for soil atmospheric methane consumption.     

Molecular analyses of novel methanotrophic communities in forest soil that oxidize atmospheric methane

Forest and other upland soils are important sinks for atmospheric CH(4), consuming 20 to 60 Tg of CH(4) per year. Consumption of atmospheric CH(4) by soil is a microbiological process. However, little is known about the methanotrophic bacterial community in forest soils. We measured vertical profiles of atmospheric CH(4) oxidation rates in a German forest soil and characterized the methanotrophic populations by PCR and denaturing gradient gel electrophoresis (DGGE) with primer sets targeting the pmoA gene, coding for the alpha subunit of the particulate methane monooxygenase, and the small-subunit rRNA gene (SSU rDNA) of all life. The forest soil was a sink for atmospheric CH(4) in situ and in vitro at all times. In winter, atmospheric CH(4) was oxidized in a well-defined subsurface soil layer (6 to 14 cm deep), whereas in summer, the complete soil core was active (0 cm to 26 cm deep). The content of total extractable DNA was about 10-fold higher in summer than in winter. It decreased with soil depth (0 to 28 cm deep) from about 40 to 1 microg DNA per g (dry weight) of soil. The PCR product concentration of SSU rDNA of all life was constant both in winter and in summer. However, the PCR product concentration of pmoA changed with depth and season. pmoA was detected only in soil layers with active CH(4) oxidation, i.e., 6 to 16 cm deep in winter and throughout the soil core in summer. The same methanotrophic populations were present in winter and summer. Layers with high CH(4) consumption rates also exhibited more bands of pmoA in DGGE, indicating that high CH(4) oxidation activity was positively correlated with the number of methanotrophic populations present. The pmoA sequences derived from excised DGGE bands were only distantly related to those of known methanotrophs, indicating the existence of unknown methanotrophs involved in atmospheric CH(4) consumption.     

Effects of O2 and CH4 on presence and activity of the indigenous methanotrophic community in rice field soil

The activity and distribution of methanotrophs in soil depend on the availability of CH4 and O2. Therefore, we investigated the activity and structure of the methanotrophic community in rice field soil under four factorial combinations of high and low CH4 and O2 concentrations. The methanotrophic population structure was resolved by denaturant gradient gel electrophoresis (DGGE) with different PCR primer sets targeting the 16S rRNA gene, and two functional genes coding for key enzymes in methanotrophs, i.e. the particulate methane monooxygenase (pmoA) and the methanol dehydrogenase (mxaF). Changes in the biomass of type I and II methanotrophic bacteria in the rice soil were determined by analysis of phospholipid-ester-linked fatty acid (PLFA) biomarkers. The relative contribution of type I and II methanotrophs to the measured methane oxidation activity was determined by labelling of soil samples with 14CH4 followed by analysis of [14C]-PLFAs. CH4 oxidation was repressed by high O2 (20.5%), and enhanced by low O2 (1%). Depending on the CH4 and O2 mixing ratios, different methanotrophic communities developed with a higher diversity at low than at high CH4 concentration as revealed by PCR-DGGE. However, a prevalence of type I or II populations was not detected. The [14C]-PLFA fingerprints, on the other hand, revealed that CH4 oxidation activity was dominated by type I methanotrophs in incubations with low CH4 mixing ratios (1000 p.p.m.v.) and during initiation of CH4 consumption regardless of O2 or CH4 mixing ratio. At high methane mixing ratios (10 000 p.p.m.v.), type I and II methanotrophs contributed equally to the measured CH4 metabolism. Collectively, type I methanotrophs responded fast and with pronounced shifts in population structure and dominated the activity under all four gas mixtures. Type II methanotrophs, on the other hand, although apparently more abundant, always present and showing a largely stable population structure, became active later and contributed to CH4 oxidation activity mainly under high CH4 mixing ratios.     

Identity of active methanotrophs in landfill cover soil as revealed by DNA-stable isotope probing

A considerable amount of methane produced during decomposition of landfill waste can be oxidized in landfill cover soil by methane-oxidizing bacteria (methanotrophs) thus reducing greenhouse gas emissions to the atmosphere. The identity of active methanotrophs in Roscommon landfill cover soil, a slightly acidic peat soil, was assessed by DNA-stable isotope probing (SIP). Landfill cover soil slurries were incubated with (13)C-labelled methane and under either nutrient-rich nitrate mineral salt medium or water. The identity of active methanotrophs was revealed by analysis of (13)C-labelled DNA fractions. The diversity of functional genes (pmoA and mmoX) and 16S rRNA genes was analyzed using clone libraries, microarrays and denaturing gradient gel electrophoresis. 16S rRNA gene analysis revealed that the cover soil was mainly dominated by Type II methanotrophs closely related to the genera Methylocella and Methylocapsa and to Methylocystis species. These results were supported by analysis of mmoX genes in (13)C-DNA. Analysis of pmoA gene diversity indicated that a significant proportion of active bacteria were also closely related to the Type I methanotrophs, Methylobacter and Methylomonas species. Environmental conditions in the slightly acidic peat soil from Roscommon landfill cover allow establishment of both Type I and Type II methanotrophs.     

Composition of Methane-Oxidizing Bacterial Communities as a Function of Nutrient Loading in the Florida Everglades

Agricultural runoff of phosphorus (P) in the northern Florida Everglades has resulted in several ecosystem level changes, including shifts in the microbial ecology of carbon cycling, with significantly higher methane being produced in the nutrient-enriched soils. Little is, however, known of the structure and activities of methane-oxidizing bacteria (MOB) in these environments. To address this, 0 to 10?cm plant-associated soil cores were collected from nutrient-impacted (F1), transition (F4), and unimpacted (U3) areas, sectioned in 2-cm increments, and methane oxidation rates were measured. F1 soils consumed approximately two-fold higher methane than U3 soils; additionally, most probable numbers of methanotrophs were 4-log higher in F1 than U3 soils. Metabolically active MOB containing pmoA sequences were characterized by stable-isotope probing using 10?% (v/v) (13)CH(4). pmoA sequences, encoding the alpha subunit of methane monooxygenase and related to type I methanotrophs, were identified from both impacted and unimpacted soils. Additionally, impacted soils also harbored type II methanotrophs, which have been shown to exhibit preferences for high methane concentrations. Additionally, across all soils, novel pmoA-type sequences were also detected, indicating presence of MOB specific to the Everglades. Multivariate statistical analyses confirmed that eutrophic soils consisted of metabolically distinct MOB community that is likely driven by nutrient enrichment. This study enhances our understanding on the biological fate of methane being produced in productive wetland soils of the Florida Everglades and how nutrient-enrichment affects the composition of methanotroph bacterial communities.     

The active methanotrophic community in hydromorphic soils changes in response to changing methane concentration

Methanotrophic communities were studied in several periodically water-saturated gleyic soils. When sampled, each soil had an oxic upper layer and consumed methane from the atmosphere (at 1.75 ppmv). In most gleyic soils the K(m(app)) values for methane were between 70 and 800 ppmv. These are higher than most values observed in dry upland soils, but lower than those measured in wetlands. Based on cultivation-independent retrieval of the pmoA-gene and quantification of partial pmoA gene sequences, type II (Alphaproteobacteria) methanotrophs of the genus Methylocystis spp. were abundant (> 10(7) pmoA target molecules per gram of dry soil). Type I (Gammaproteobacteria) methanotrophs related to the genera Methylobacter and Methylocaldum/Methylococcus were detected in some soils. Six pmoA sequence types not closely related to sequences from cultivated methanotrophs were detected as well, indicating that diverse uncultivated methanotrophs were present. Three Gleysols were incubated under different mixing ratios of (13)C-labelled methane to examine (13)C incorporation into phospholipid fatty acids (PLFAs). Phospholipid fatty acids typical of type II methanotrophs, 16:0 and 18:1omega7c, were labelled with (13)C in all soils after incubation under an atmosphere containing 30 ppmv of methane. Incubation under 500 ppmv of methane resulted in labelling of additional PLFAs besides 16:0 and 18:1omega7c, suggesting that the composition of the active methanotrophic community changed in response to increased methane supply. In two soils, 16:1 PLFAs typical of type I methanotrophs were strongly labelled after incubation under the high methane mixing ratio only. Type II methanotrophs are most likely responsible for atmospheric methane uptake in these soils, while type I methanotrophs become active when methane is produced in the soil.