Aspects of Gondwana paleobotany: gymnosperms of the Paleozoic—Mesozoic transition

During the late Paleozoic and early Mesozoic the Gondwana Supercontinent underwent dramatic geographic and climatic changes. Geologic and biologic factors concurrently played an important role modelling the vegetation of that time. The gymnospermic component of plant assemblages shows significant variations in composition and in the distribution of different taxa. Analysis of the assemblages shows that some plant groups dominated the scenario, such as the pteridosperms, glossopterids, corystosperms and, to a lesser degree, cordaites and conifers. Ginkgophytes, bennettites or cycads were less important in the Paleozoic but their numbers increased in the Triassic. Paleozoic assemblages were extensively dominated by glossopterids that became extinct in the earliest Mesozoic. Pteridosperms crossed the P—M barrier and became dominant during the Triassic, at a time when corystosperms evolved and radiated. Other groups became extinct in the Paleozoic, namely dicranophylls and cordaites. Conifers were represented by different families, restricted either to the Paleozoic or the Mesozoic. They were not conspicuous in the analysed assemblages. In some areas of Gondwana, taxa of the Euramerican alliance are present through a migrational mechanism that occurred during continental displacements which produced global climatic changes. Recent studies have shown that there are far more common elements between Euramerica and Gondwana than suspected up to now. These elements find their distribution especially in the western part of Gondwana (Africa—South America).     

Palaeobiogeographic distribution patterns and processes of Neochonetes and Fusichonetes (Brachiopoda) in the late Palaeozoic and earliest Mesozoic

The global palaeobiogeographic distributions of two resembling genera, Neochonetes and Fusichonetes (Brachiopoda), from the Carboniferous to Griesbachian are analysed. This analysis provides insight into the biotic response of two related genera to changing palaeoclimate, regional tectonics, and environmental crises. Neochonetes originated in the equatorial area in the Mississippian, and it mostly retained this position during the peak of the glaciation in the Carboniferous–Permian ice age (namely in the Pennsylvanian). Neochonetes then dispersed globally during the Cisuralian when the climate became warmer and the ice sheet started to retreat. In the Guadalupian and Lopingian, following the closure of the Ural seaway at the end of the Cisuralian and the regression at the end-Guadalupian, Neochonetes almost disappeared in the western part of Gondwana. Subsequently during the Lopingian the genus retracted to the middle- and low-latitude Palaeo-Tethys and Tethys. In comparison, Fusichonetes originated in the equatorial area in the late Guadalupian and was still present in that area in the Lopingian. Both genera occurred only in South China in the Griesbachian. It is inferred that this could be related, not only to the deteriorated palaeoenvironmental conditions (e.g., anoxia, global warming) leading up to the extinction of most of the Neochonetes and Fusichonetes species in other areas, but also to the better physiological adaptation of the smaller shells of Neochonetes and Fusichonetes species in South China.     

Bryophyte disjunctions in the Northern Hemisphere: Europe and North America*

Two major disjunctions are recognized between the bryofloras of Europe and North America: Amphi-Atlantic and Western Europe—Western North America. Each of these has specifically segregated floras related to climatic regimes and correlated with different historical development. An interpretation of the disjunctions is based on reconstruction of past continental interconnections coincident with reconstructed climates and an understanding of the biology of the bryophytes.     

Onset of spring starting earlier across the Northern Hemisphere

Recent warming of Northern Hemisphere (NH) land is well documented and typically greater in winter/spring than other seasons. Physical environment responses to warming have been reported, but not details of large‐area temperate growing season impacts, or consequences for ecosystems and agriculture. To date, hemispheric‐scale measurements of biospheric changes have been confined to remote sensing. However, these studies did not provide detailed data needed for many investigations. Here, we show that a suite of modeled and derived measures (produced from daily maximum–minimum temperatures) linking plant development (phenology) with its basic climatic drivers provide a reliable and spatially extensive method for monitoring general impacts of global warming on the start of the growing season. Results are consistent with prior smaller area studies, confirming a nearly universal quicker onset of early spring warmth (spring indices (SI) first leaf date, ?1.2 days decade^?1), late spring warmth (SI first bloom date, ?1.0 days decade^?1; last spring day below 5°C, ?1.4 days decade^?1), and last spring freeze date (?1.5 days decade^?1) across most temperate NH land regions over the 1955–2002 period. However, dynamics differ among major continental areas with North American first leaf and last freeze date changes displaying a complex spatial relationship. Europe presents a spatial pattern of change, with western continental areas showing last freeze dates getting earlier faster, some central areas having last freeze and first leaf dates progressing at about the same pace, while in portions of Northern and Eastern Europe first leaf dates are getting earlier faster than last freeze dates. Across East Asia last freeze dates are getting earlier faster than first leaf dates.     

Synchronous marine pelagic regime shifts in the Northern Hemisphere

Regime shifts are characterized by sudden, substantial and temporally persistent changes in the state of an ecosystem. They involve major biological modifications and often have important implications for exploited living resources. In this study, we examine whether regime shifts observed in 11 marine systems from two oceans and three regional seas in the Northern Hemisphere (NH) are synchronous, applying the same methodology to all. We primarily infer marine pelagic regime shifts from abrupt shifts in zooplankton assemblages, with the exception of the East Pacific where ecosystem changes are inferred from fish. Our analyses provide evidence for quasi-synchronicity of marine pelagic regime shifts both within and between ocean basins, although these shifts lie embedded within considerable regional variability at both year-to-year and lower-frequency time scales. In particular, a regime shift was detected in the late 1980s in many studied marine regions, although the exact year of the observed shift varied somewhat from one basin to another. Another regime shift was also identified in the mid- to late 1970s but concerned less marine regions. We subsequently analyse the main biological signals in relation to changes in NH temperature and pressure anomalies. The results suggest that the main factor synchronizing regime shifts on large scales is NH temperature; however, changes in atmospheric circulation also appear important. We propose that this quasi-synchronous shift could represent the variably lagged biological response in each ecosystem to a large-scale, NH change of the climatic system, involving both an increase in NH temperature and a strongly positive phase of the Arctic Oscillation. Further investigation is needed to determine the relative roles of changes in temperature and atmospheric pressure patterns and their resultant teleconnections in synchronizing regime shifts at large scales.     

Three genome-based phylogeny of Cupressaceae s.l.: further evidence for the evolution of gymnosperms and Southern Hemisphere biogeography

Phylogenetic information is essential to interpret the evolution of species. While DNA sequences from different genomes have been widely utilized in phylogenetic reconstruction, it is still difficult to use nuclear genes to reconstruct phylogenies of plant groups with large genomes and complex gene families, such as gymnosperms. Here, we use two single-copy nuclear genes, together with chloroplast and mitochondrial genes, to reconstruct the phylogeny of the ecologically-important conifer family Cupressaceae s.l., based on a complete sampling of its 32 genera. The different gene trees generated are highly congruent in topology, supporting the basal position of Cunninghamia and the seven-subfamily classification, and the estimated divergence times based on different datasets correspond well with each other and with the oldest fossil record. These results imply that we have obtained the species phylogeny of Cupressaceae s.l. In addition, possible origins of all three polyploid conifers were investigated, and a hybrid origin was suggested for Cupressus, Fitzroya and Sequoia. Moreover, we found that the biogeographic history of Cupressaceae s.l. is associated with the separation between Laurasia and Gondwana and the further break-up of the latter. Our study also provides new evidence for the gymnosperm phylogeny.     

Patterns in the assembly of temperate forests around the Northern Hemisphere

Recent studies of Northern Hemisphere biogeography have highlighted potentially significant differences between disjunction patterns in plants versus animals. To assess such differences, we compiled a larger sample of relevant plant phylogenies from which disjunction patterns, ancestral areas and directions of movement could be inferred. We considered 66 plant clades with species variously endemic today to eastern Asia (EA), Europe (including southwestern Asia), eastern North America (ENA), and/or western North America (WNA). Within these clades we focused on 100 disjunctions among these major areas, for 33 of which absolute divergence times have also been inferred. Our analyses uphold the view that disjunctions between EA and ENA are exceptionally common in plants, apparently more so than in animals. Compared with animals, we find few disjunctions between EA and WNA, consistent with increased extinction in WNA or failure of some groups to colonize that region. Taken at face value, our data also support the view that many temperate forest plant groups originated and diversified within EA, followed by movement out of Asia at different times, but mostly during the last 30 Myr. This favours Beringia over a North Atlantic land bridge as the primary path between the Old World and the New World. Additional studies are needed, especially to evaluate the impacts of differential extinction on these patterns, to more confidently establish divergence times, and to assess the statistical significance of these findings. Fortunately, many more plant groups show relevant disjunction patterns and could soon be added to such analyses.     

Coevolution of Human Beain Size and Paleolithic Culture in the Northern Hemisphere: Relation to Geomagnetic Intensity

A statistical survey of changes in human cranial capacity, paleolithic culture and geomagnetic intensity over geological time shows these to have followed a parallel if irregular course since the advent of Homo erectus in the northern hemisphere. Peak rates of the brainculture coevolutionary process occurred in the Mindel and Wurm ice ages, in phase with the highest mean geomagnetic intensities recorded during the Middle and Upper Pleistocene, respectively. This triple association is not likely the result of chance: a geomagnetic-neuroendocrine mechanism involving the hippocampus and growth hormone is offered as a possible explanation.     

Patterns of endemism in riverine fish of the Northern Hemisphere

Loss of endemic species represents a symptom of general degrading ecosystem conditions that is the indirect result of biodiversity alteration. Here, we developed a predictive model relating species richness of endemic riverine fishes to measured biological, climatic, and historical variables using data from 118 rivers distributed all over the Northern Hemisphere. In a minimally adequate multiple general least square model, total riverine fish species richness, historical biogeography (Pleistocene glaciations), and comtemporary climate accounted for 63% of the variability in endemic species richness; the strongest correlate being riverine fish species richness. Our findings suggest that (i) endemism and richness patterns are generally similar (fish diversity "hot-spots" areas sustain higher endemic species richness); (ii) glaciation in the Pleistocene have had a significant negative influence on endemic species richness in the more septentrional areas; and (iii) certain basins situated in desertic areas (subtropical dry-zone of deserts) have unusually high numbers of endemics. These last areas should not be overshadowed when setting conservation priorities.     

Northern Hemisphere Glaciation during the Globally Warm Early Late Pliocene

The early Late Pliocene (3.6 to ∼3.0 million years ago) is the last extended interval in Earth''s history when atmospheric CO₂ concentrations were comparable to today''s and global climate was warmer. Yet a severe global glaciation during marine isotope stage (MIS) M2 interrupted this phase of global warmth ∼3.30 million years ago, and is seen as a premature attempt of the climate system to establish an ice-age world. Here we propose a conceptual model for the glaciation and deglaciation of MIS M2 based on geochemical and palynological records from five marine sediment cores along a Caribbean to eastern North Atlantic transect. Our records show that increased Pacific-to-Atlantic flow via the Central American Seaway weakened the North Atlantic Current and attendant northward heat transport prior to MIS M2. The consequent cooling of the northern high latitude oceans permitted expansion of the continental ice sheets during MIS M2, despite near-modern atmospheric CO₂ concentrations. Sea level drop during this glaciation halted the inflow of Pacific water to the Atlantic via the Central American Seaway, allowing the build-up of a Caribbean Warm Pool. Once this warm pool was large enough, the Gulf Stream–North Atlantic Current system was reinvigorated, leading to significant northward heat transport that terminated the glaciation. Before and after MIS M2, heat transport via the North Atlantic Current was crucial in maintaining warm climates comparable to those predicted for the end of this century.     

Springtails (Collembola) in the Subpolar Landscapes of the Northern Hemisphere

An overview of previously published and new information on the collembolan fauna and assemblage structure in the polar desert zone is presented. So far, 71 springtail species from 37 genera and 11 families have been reliably recorded within the zone. Eleven species are added to the previously known fauna of Franz Josef Land, and the very north of Novaya Zemlya has been surveyed for the first time. Even the much better known fauna of Bolshevik Island, Severnaya Zemlya is enriched by 3 species. The known species richness of springtails of Ellef Ringnes Island, Canadian Arctic Archipelago, is also increased from 8 to 13 species. Most genera except Folsomia and Hypogastrura include only 1, more rarely 2 species in each study region of the polar desert zone. Species with circumpolar distribution patterns comprise more than 60% of the total list, but only 10 species are common to all the three provinces; this obviously indicates a certain regional specificity. Besides, the faunas of different provinces (and regions within a province) vary markedly in the proportion of species with more southern distribution patterns. Nevertheless, the collembolan assemblages in all the three provinces of the polar desert zone are rather similar at the structural level, this being a direct consequence of the general depletion of the complexes against the background of high total abundance and less pronounced habitat specificity of the common species.     

Patterns of Annual Seed Production by Northern Hemisphere Trees: A Global Perspective

We tested whether annual seed production (masting or mast fruiting) in Northern Hemisphere trees is an evolved strategy or a consequence of resource tracking by comparing masting patterns with those of annual rainfall and mean summer temperatures, two environmental variables likely to correlate with available resources. There were generally significant negative autocorrelations between the seed crop in year x and year x+1 (year x+2 in species of Quercus requiring 2 yr to mature acorns), as expected if resources are depleted in mast years in part by switching resources from growth to reproduction. Spatial autocorrelation in annual seed production generally declined with distance but was statistically significant over large geographic areas. Variability in annual seed production was relatively high and inversely correlated with latitude and generally not bimodally distributed. Patterns of spatial autocorrelation in annual rainfall and summer temperatures are generally similar to those exhibited by annual seed production, and relative variability in annual rainfall is also inversely correlated with latitude. However, these environmental variables exhibit distinctly different patterns of temporal autocorrelation, are much less variable, and are more normally distributed than annual seed production. Combined with the inverse relationship between growth and reproduction previously documented, these results support the hypothesis that variability in annual seed production is an evolved strategy and that annual seed production is more or less normally distributed rather than an all-or-none phenomenon.     

The evolution of gymnosperms redrawn by phytochrome genes: the Gnetatae appear at the base of the gymnosperms

Gymnosperms possess two to four phytochrome types which apparently are the result of successive gene duplications in the genomes of their common ancestors. Phytochromes are nuclear-encoded proteins whose genes, contrary to chloroplast, mitochondrion, and rRNA genes, have hitherto rarely been used to examine gymnosperm phylogenies. Since the individual phytochrome gene types implied phylogenies that were not completely congruent to one another, conflicting branching orders were sorted by the number of gene lineages present in a taxon. The Gnetatae (two gene types) branched at the base of all gymnosperms, a position supported by bootstrap sampling (distance and character state trees, maximum likelihood). The Gnetatae were followed by Ginkgo, Cycadatae, and Pinaceae (three gene types) and the remaining conifers (four gene types). Therefore, in phytochrome trees, the most ancient branch of the conifers (Pinatae) seems to be the Pinaceae. The next split appears to have separated Araucariaceae plus Podocarpaceae from the Taxaceae/Taxodiaceae/Cupressaceae group. Structural arrangements in the plastid genomes (Raubeson and Jansen 1992) corroborate the finding that there is no close connection between Pinaceae and Gnetatae as suggested by some publications. The analyses are based on 60 phytochrome genes (579 positions in an alignment of PCR fragments) from 28 species. According to rough divergence time estimates, the last common ancestor of gymnosperms and angiosperms is likely to have existed in the Carboniferous.     

The use of biological stains in the analysis of late Palaeozoic pteridosperm cuticles

The use of biological stains in the cuticular analysis of late Palaeozoic pteridosperms based on specimens from the Stephanian Blanzy-Montceau Basin (Central France) is discussed. Bismarck Brown, Malachite Green G, Methylene Blue, Methyl Green, Neutral Red, Safranin T, and a double staining with Neutral Red and Malachite Green G, were tested. Bismarck Brown, Malachite Green G, Methylene Blue, and Neutral Red increase contrast and emphasize differences in cutinization. The double staining in Neutral Red and Malachite Green G enhances the three-dimensional morphology of complex epidermal structures. Safranin T increases contrast, emphasizes cutinization differences, and enhances the three-dimensional morphology of complex epidermal features. The colour photography of cuticles is normally not affected by the presence of stains, but some stains mask black-and-white half-tones.     

A new global palaeobiogeographical model for the late Mesozoic and early Tertiary

Late Mesozoic palaeobiogeography has been characterized by a distinction between the northern territories of Laurasia and the southern landmasses of Gondwana. The repeated discovery of Gondwanan lineages in Laurasia has led to the proposal of alternative scenarios to explain these anomalous occurrences. A new biogeographical model for late Mesozoic terrestrial ecosystems is here proposed in which Europe and "Gondwanan" territories possessed a common Eurogondwanan fauna during the earliest Cretaceous. Subsequently, following the Hauterivian, the European territories severed from Africa and then connected to Asiamerica resulting in a faunal interchange. This model explains the presence of Gondwanan taxa in Laurasia and the absence of Laurasian forms in the southern territories during the Cretaceous. In order to test this new palaeobiogeographical model, tree reconciliation analyses (TRAs) were performed based on biogeographical signals provided by a supertree of late Mesozoic archosaurs. The TRAs found significant evidence for the presence of an earliest Cretaceous Eurogondwanan fauna followed by a relatively short-term Gondwana-Laurasia dichotomy. The analysis recovered evidence for a biogeographical reconnection of the European territories with Africa and South America-Antarctica during the Campanian to Maastrichtian time-slice. This biogeographical scenario appears to continue through the early Tertiary and sheds light on the trans-Atlantic disjunct distributions of several extant plant and animal groups.     

Phylogenetic and biogeographic diversification of Rhus (Anacardiaceae) in the Northern Hemisphere

Sequences of internal transcribed spacers (ITS) of nuclear ribosomal DNA, the chloroplast ndhF gene, and chloroplast trnL-F regions (trnL intron, and trnL [UAA] 3' exon-trnF [GAA] intergenic spacer) were used for phylogenetic analyses of Rhus, a genus disjunctly distributed in Asia, Europe, Hawaii, North America, and Northern Central America. Both ITS and cpDNA data sets support the monophyly of Rhus. The monophyly of subgenus Rhus was suggested by the combined cpDNA and ITS data, and largely supported in the cpDNA data except that Rhus microphylla of subgenus Lobadium was nested within it. The monophyly of subgenus Lobadium was strongly supported in the ITS data, whereas the cpDNA data revealed two main clades within the subgenus, which formed a trichotomy with the clade of subgenus Rhus plus R. microphylla. The ITS and cpDNA trees differ in the positions of Rhus michauxii, R. microphylla, and Rhus rubifolia, and hybridization may have caused this discordance. Fossil evidence indicates that Rhus dates back to the early Eocene. The penalized likelihood method was used to estimate divergence times, with fossils of Rhus subgenus Lobadium, Pistacia and Toxicodendron used for age constraints. Rhus diverged from its closest relative at 49.1+/-2.1 million years ago (Ma), the split of subgenus Lobadium and subgenus Rhus was at 38.1+/-3.0 Ma. Rhus most likely migrated from North America into Asia via the Bering Land Bridge during the Late Eocene (33.8+/-3.1 Ma). Rhus coriaria from southern Europe and western Asia diverged from its relatives in eastern Asia at 24.4+/-3.2 Ma. The Hawaiian Rhus sandwicensis diverged from the Asian Rhus chinensis at 13.5+/-3.0 Ma. Subgenus Lobadium was inferred to be of North American origin. Taxa of subgenus Lobadium then migrated southward to Central America. Furthermore, we herein make the following three nomenclatural combinations: (1) Searsia leptodictya (Diels) T. S. Yi, A. J. Miller and J. Wen, comb. nov., (2) Searsia pyroides (A. Rich.) T. S. Yi, A. J. Miller and J. Wen, comb. nov., and (3) Searsia undulata (Jacq.) T. S. Yi, A. J. Miller and J. Wen, because our analyses support the segregation of Searsia from Rhus.     

Comparative population dynamics of large and small mammals in the Northern Hemisphere: deterministic and stochastic forces

Deterministic feedbacks within populations interact with extrinsic, stochastic processes to generate complex patterns of animal abundance over time and space. Animals inherently differ in their responses to fluctuating environments due to differences in body sizes and life history traits. However, controversy remains about the relative importance of deterministic and stochastic forces in shaping population dynamics of large and small mammals. We hypothesized that effects of environmental stochasticity and density dependence are stronger in small mammal populations relative to their effects in large mammal populations and thus differentiate the patterns of population dynamics between them. We conducted an extensive, comparative analysis of population dynamics in large and small mammals to test our hypothesis, using seven population parameters to describe general dynamic patterns for 23 (14 species) time series of observations of abundance of large mammals and 38 (21 species) time series for small mammals. We used state‐space models to estimate the strength of direct and delayed density dependence as well as the strength of environmental stochasticity. We further used phylogenetic comparative analysis to detect differences in population dynamic patterns and individual population parameters, respectively, between large and small mammals. General population dynamic patterns differed between large and small mammals. However, the strength of direct and delayed density dependence was comparable between large and small mammals. Moreover, the variances of population growth rates and environmental stochasticity were greater in small mammals than in large mammals. Therefore, differences in population response to stochastic forces and strength of environmental stochasticity are the primary factor that differentiates population dynamic patterns between large and small mammal species.     

Latitudinal gradient of taxonomic richness of ammonites in the Kimmeridgian-Volgian in the Northern Hemisphere

The latitudinal gradient of taxonomic richness (LGTR) of Kimmeridgian and Volgian ammonite genera of the Northern Hemisphere is evaluated, and the LGTR evaluation methods and factors influencing LGTR are discussed. In the Kimmeridgian-Volgian the LGTR values for ammonites were largely influenced by the paleogeography of the Middle Russian Sea, which was directly connected with the Neotethys and, to a lesser extent, by the exchange through the connection between the Arctic and Pacific oceans. The Middle Russian Sea is considered to have been a major source of immigrant taxa to the Arctic basins. The highest latitude ammonite faunas were influenced by the Pacific faunas, and due to the permanent presence of oceanic phylloceratids and lytoceratids, ammonite taxonomic richness was relatively high compared to some mid-latitudinal sites. The gradual decrease in taxonomic richness that occurred from the end of the Kimmeridgian to the end of the Volgian in all Subboreal basins probably resulted from the eventual isolation from the Neotethys. Subboreal ammonite associations from the ecotone between the two superrealms (Panboreal and Tethys-Panthalassa) were affected by short-term climatic oscillations, which led to rapid changes in the ammonite assemblages.