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1.
    
DNA barcoding is a proven tool for the rapid and unambiguous identification of species, which is essential for many activities including the vouchering tissue samples in the genome 10K initiative, genealogical reconstructions, forensics and biodiversity surveys, among many other applications. A large‐scale effort is underway to barcode all amphibian species using the universally sequenced DNA region, a partial fragment of mitochondrial cytochrome oxidase subunit I COI. This fragment is desirable because it appears to be superior to 16S for barcoding, at least for some groups of salamanders. The barcoding of amphibians is essential in part because many species are now endangered. Unfortunately, existing primers for COI often fail to achieve this goal. Herein, we report two new pairs of primers (?, ?) that in combination serve to universally amplify and sequence all three orders of Chinese amphibians as represented by 36 genera. This taxonomic diversity, which includes caecilians, salamanders and frogs, suggests that the new primer pairs will universally amplify COI for the vast majority species of amphibians.  相似文献   

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Elucidation of the mechanisms controlling early development and organogenesis is currently progressing in several model species and a new field of research, evolutionary developmental biology, which integrates developmental and comparative approaches, has emerged. Although the expression pattern of many genes during tooth development in mammals is known, data on other lineages are virtually non-existent. Comparison of tooth development, and particularly of gene expression (and function) during tooth morphogenesis and differentiation, in representative species of various vertebrate lineages is a prerequisite to understand what makes one tooth different from another. Amphibians appear to be good candidates for such research for several reasons: tooth structure is similar to that in mammals, teeth are renewed continuously during life (=polyphyodonty), some species are easy to breed in the laboratory, and a large amount of morphological data are already available on diverse aspects of tooth biology in various species. The aim of this review is to evaluate current knowledge on amphibian teeth, principally concerning tooth development and replacement (including resorption), and changes in morphology and structure during ontogeny and metamorphosis. Throughout this review we highlight important questions which remain to be answered and that could be addressed using comparative morphological studies and molecular techniques. We illustrate several aspects of amphibian tooth biology using data obtained for the caudate Pleurodeles waltl. This salamander has been used extensively in experimental embryology research during the past century and appears to be one of the most favourable amphibian species to use as a model in studies of tooth development.  相似文献   

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Length-weight relationship was estimated for three fish species, including: Lethrinus microdon (Valenciennes, 1,830), Sphyraena jello (Cuvier, 1829) and Euthynnus affinis (Cantor, 1849). Specimens were sampled between May 2014 and June 2015 from the fish caught by the local artisanal fishery and landed in main fishing landing site of Mocka city. Values of b for fish ranged from 2.644 for S. jello to 2.706 for E. affinis and 3.187 for L. microdon. The determination coefficient (r2) between total length and total body weight ranged from .952 in E. affinis to 0.957 in S. jello and 0.960 in L. microdon.  相似文献   

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《Comptes Rendus Palevol》2019,18(7):817-847
Excavations in the locality Gritsev (karstic fillings of the upper Miocene age in a limestone quarry in Shepetovsky District, Khmelnitsky Region, Ukraine) revealed, since 1983 when excavations started, a rich vertebrate fauna that includes also amphibians and lizards. The material is rich enough to assess individual and developmental variation within some taxa (e.g., Pseudopus pannonicus). Although the fragmentary nature of the disarticulated bones does not sometimes allow precise taxonomic assignment, morphological differences in, e.g., dental characteristics suggest the presence of some other ones, not formally named forms. Thus, the list of the amphibian and reptilian taxa from Gritsev is by far not complete, but their osteological characteristics are representative to such a degree that they can provide information for comparisons with other European Miocene herpetofaunas.  相似文献   

6.
四川无尾两栖类的繁殖模式   总被引:3,自引:0,他引:3  
依据Duellman和Trueb(1986)的定义,对四川无尾两栖动物的繁殖模式多样性进行了研究。研究结果如下:(1)73种四川无尾类可以划分为2类共5种繁殖模式。水内产卵是比较原始的一类繁殖模式,又分2种:静水产卵(模式1)和流水产卵(模式2),68种(93%)是在水内产卵;水外产卵是较进化的一类繁殖模式,又分3种:卵产在近水塘的泥窝中(模式12),卵泡产在近水域的土穴中(模式21)和卵泡产在近水域的树上或灌丛上(模式23),仅5种(7%)在水外产卵。(2)模式1、12、21、23的两栖动物,雌雄性的体型较模式2的物种为小,产卵的数量大,但卵径较小;蝌蚪的生态表型均可归入静水型,共同特点是蝌蚪体型小,在静水中觅食,生长发育快。模式2的两栖动物,雌雄性的体型较大,产卵的数量少,而卵径较大;蝌蚪的生态表型可归入流水型,特点是蝌蚪体型大,在流水中觅食,生长发育慢。(3)水内产卵的两栖动物的窝卵能量投入方式可以分为两种:静水产卵(模式1)的物种通过增加卵的数量来增加投入,接近于r-选择物种;流水产卵(模式2)的物种通过增大卵径来增加投入,接近于k-选择物种;是两种适应不同环境条件的的繁殖策略。  相似文献   

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As a process affecting animal communities, urbanization has been the subject of numerous studies. However, amphibians are still among the least studied vertebrate groups in urbanized landscapes. Generally, it has been found that the process of loss of amphibian diversity is nonrandom, with species from older evolutionary lines at greater risk. Regional data on amphibian assemblages in urban areas is a very useful tool for assessing how these assemblages react to changes.The aim of the present paper is to assess the diversity of amphibians in Polish cities based on data in the relevant literature, exploring different metrics (e.g., taxonomic, functional, and evolutionary diversity) calculated in amphibian species assemblages. We used data from 18 articles (including grey literature), characterized by comparable research methods and published between 1999 and 2017.Overall, amphibian species richness (ASR) amounted to an average of 9 species, ranging from 5 to 11 species per city. The higher species richness occurred in Białystok in North-west of Poland. Functional evenness (FEve), evolutionary distinctiveness (ED sum), and functional richness (FRic) were strongly positively correlated with ASR. However, ED mean was not significantly correlated with the total number of species in the community. Three taxa, the hybridogenetic water frogs Pelophylax esculentus complex, the common toad Bufo bufo, and the common frog Rana temporaria, occurred in all analyzed amphibian assemblages. Our study is one of the first attempts to compare urban amphibian assemblages, using different and complementary diversity metrics on a large spatial scale. In conclusion, we highlight that urban areas play an important role for conservation of amphibians, because they support amphibian assemblages characterized by a high level of overall diversity.  相似文献   

9.
    
Aim Invasive species often exhibit a highly non‐random suite of traits relative to non‐invasive taxa, and these biases reflect strong selection at a series of steps along the invasion pathway. Here we investigate traits that are favoured in the first of these steps: the introduction of species outside their native geographic range. We use the global introduction of amphibians as our case study. Location Global. Methods We examined whether taxonomy, body size and attributes of the native geographic range predict the likelihood of an introduction event in amphibians. We then determined whether these characteristics differed between amphibian species that have been introduced intentionally and those that have been introduced unintentionally (i.e. stowaways). Results Comparisons of introduced and non‐introduced amphibians reveal significant biases with respect to taxonomic position (c. 50% of all introduced species originate from only 5% of all families), and characteristics of the native geographic range (most introduced species originate from the Northern Hemisphere, occupy a wide geographic range and are sympatric with high densities of humans). Many of these biases presumably reflect the ease and likelihood of capturing and transporting such animals. Additionally, intentionally introduced species are of larger than average body size, occupy higher elevations in their native ranges, and are more likely to originate from the Northern Hemisphere than unintentionally introduced species. Main conclusions Introduced amphibian species are not a random subset of the global amphibian fauna with respect to taxonomic affiliation and biogeography, and this restricts our ability to make robust generalizations regarding the ecological determinants of introduction success. Nevertheless, many of our findings are similar to those revealed by previous analyses of vertebrate and invertebrate introductions. Thus, our study suggests that biases in the anthropogenic mechanisms involved in transporting species around the globe are surprisingly consistent across broadly divergent taxa.  相似文献   

10.
Rissler LJ  Smith WH 《Molecular ecology》2010,19(24):5404-5416
Identifying congruence in the geographical position of lineage breaks and species range limits across multiple taxa is a focus of the field of comparative phylogeography. These regions are biogeographical hotspots for investigations into the processes driving divergence at multiple phylogenetic levels. We used spatially explicit statistical methods to identify these regions for amphibians across the United States. Significant clustering occurred in the Appalachian Mountains and in the general area of Alabama - a region underappreciated as an important amphibian hotspot. When the orders Caudata and Anura were examined separately, spatial clustering was still found in Alabama for both. However, in Caudata the Appalachians and California were also important, and for Anura, the Great Lakes region was highlighted. When species richness was statistically controlled, cluster hotspots shifted out of Alabama and the Appalachians and moved to broader swaths of the Great Lakes region, southwestern United States and California. The exact location of particular suture zones is probably a result of complex interactions between historical and ecological factors including physiography, climate and distance from glacial refugia. These contact zone and phylogeographical break hotspots are ideal arenas in which to test alternative speciation hypotheses and examine the extent of reproductive isolation using novel, integrative approaches combining modern methods in statistical phylogeography, ecological niche modelling and genomics.  相似文献   

11.
    
This study explores the life-history parameters of female Merluccius capensis off South Africa (N = 1819) during 2014–2016, including gonadosomatic index (GSI), length-at-maturity, length–weight relationships, and condition indices (relative condition [k] and Fulton's condition factor [K]). We detected weak indications of two peaks of spawning within the year, the first in austral autumn from March to May, whereas the other in austral spring around August. GSI was slightly higher in spring and autumn, though still low at all maturity stages (≤7%), though the opposite was true for the actively spawning stage (≥7%) as well as access to less such data during winter- and summertime. The length (L) at 50% maturity was around 38 cm (L50), though differences occurred between the two applied staging methods, histology and visual (macroscopic) classification, when L approached infinity. The latter method presented underestimated length at maturity values at the 75 and 95 percentiles (48 and 60 cm) compared to the corresponding percentiles given by histology (50 and 65 cm). There were trivial across-method differences in L50. However, we found a clear reduction in L50 in view of published information in prior years when this estimate was 48 (1985), 42 (2008), 53 (2011), and 24.8 (2015) cm. Overall, L explained 90% of the variation in whole body weight (W). As the bootstrapped, grand mean growth coefficient was b = 2.98, indicating a slight allometric growth function, there were no significant variations between years, though an isometric growth existed for 2016 with b = 3.0, whereas for 2014 and 2015 this b was 2.98 and 2.93, respectively. In terms of demography, females <60 cm generally showed isometric growth (b = 3) as opposed to allometric growth (b = 2.95) at >60 cm. The relative condition index (k = 1) exhibited higher values than Fulton's K, which was 0.80. Overall, the maternal stock of M. capensis along the south coast seems to be in good condition and likely spawns throughout the year, but we found that the macroscopic data tend to give biased maturity ogives.  相似文献   

12.
The extant amphibians are one of the most diverse radiations of terrestrial vertebrates (>6800 species). Despite much recent focus on their conservation, diversification, and systematics, no previous phylogeny for the group has contained more than 522 species. However, numerous studies with limited taxon sampling have generated large amounts of partially overlapping sequence data for many species. Here, we combine these data and produce a novel estimate of extant amphibian phylogeny, containing 2871 species (∼40% of the known extant species) from 432 genera (∼85% of the ∼500 currently recognized extant genera). Each sampled species contains up to 12,712 bp from 12 genes (three mitochondrial, nine nuclear), with an average of 2563 bp per species. This data set provides strong support for many groups recognized in previous studies, but it also suggests non-monophyly for several currently recognized families, particularly in hyloid frogs (e.g., Ceratophryidae, Cycloramphidae, Leptodactylidae, Strabomantidae). To correct these and other problems, we provide a revised classification of extant amphibians for taxa traditionally delimited at the family and subfamily levels. This new taxonomy includes several families not recognized in current classifications (e.g., Alsodidae, Batrachylidae, Rhinodermatidae, Odontophrynidae, Telmatobiidae), but which are strongly supported and important for avoiding non-monophyly of current families. Finally, this study provides further evidence that the supermatrix approach provides an effective strategy for inferring large-scale phylogenies using the combined results of previous studies, despite many taxa having extensive missing data.  相似文献   

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Intraspecific genetic variation is key for adaptation and survival in changing environments and is known to be influenced by many factors, including population size, dispersal and life-history traits. We investigated genetic variation within Neotropical amphibian species to provide insights into how natural history traits, phylogenetic relatedness, climatic and geographic characteristics can explain intraspecific genetic diversity.  相似文献   

15.
Kinoshita  Junji  Hiromi  Juro  Kadota  Sadami 《Hydrobiologia》1997,347(1-3):51-55
We measured the respiration rate of Aurelia aurita payingspecial attention to the relationship between its metabolic ratesand body mass throughout ontogeny of the jellyfish in a sexualgeneration. Two different regression lines between respirationrates and body dry weight were obtained in ephyra to young medusa(bell diameter 4.2–19 mm, 0.07–14 mg dry weight) and medusa(BD17-120 mm, 12-2100 mg DW), at respective temperatures of 10 and15 °C. The cut off point of the metabolic rates was foundat the developmental stage just being metamorphosed into medusashape (BD 12–20 mm). The slope value of medusa respiration ratewas close to isometric scaling (0.9), whereas that of ephyra toyoung medusa was lower (0.6). Ecological implications of allometricscaling in the early developmental stages of ephyrae and metephyraeare discussed.  相似文献   

16.
From literature data on 116 taxa crosses involving 46 species of frogs, we found a positive correlation between degree of divergence (measured as Nei's genetic distance, D) and degree of postzygotic isolation. In anurans, hybrid sterility appears to evolve more quickly than inviability, which is consistent with the conclusions of other studies that involved Drosophila species. The lower threshold of D = 0.30 for evolution of hybrid inviability that we found is similar to that observed for Drosophila. This consistency suggests that there may be a general pattern in the acquisition of reproductive isolation in animals.  相似文献   

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18.
Morphological evolution of Ceratophryinae (Anura, Neobatrachia)   总被引:1,自引:0,他引:1  
Body form is one of the major consequences of development, and diversification of body shapes implies developmental changes among species. In anurans, changes in the timing of developmental events or heterochrony, have been emphasized as a source of variation in the patterns of development that has lead to diverse morphology. Herein, different approaches are used to explore morphological traits in members of the Ceratophryinae (Anura: Leptodactylidae), a group of frogs with some features produced by overdevelopment. Cladistic analyses were conducted in order to distinguish the shared history of Ceratophrys, Chacophrys and Lepidobatrachus and other anurans. From these studies, morphological variation of selected skeletal features in ceratophryines reveals the presence of ancient structures, which have been considered lost in the neobatrachian phylogeny, integrated in particular designs. Thin-plate spline morphometric analyses of skull shapes among ceratophryines describe Lepidobatrachus as the most distinctive shape. Moreover, thin-plate spline morphometric analyses among anurans show divergent skull shapes between ceratophryines and other anurans, reflecting that the skull shapes of ceratophryines are a result of peramorphosis (increase of developmental rates). This study represents the first detailed examination of the role of peramorphosis in a clade of anurans.  相似文献   

19.
    
The Neotropical genera of the linyphiid spider subfamily Erigoninae are revised at the genus level. Emphasis was placed on genera endemic to the Neotropics and species with dubious relationships to their nominal genera, especially species from the older literature. This work recognizes 50 genera in the Neotropics, of which 39 genera are strictly endemic to the Neotropics, three are represented outside the Neotropics by one species, and eight genera have significant representation both in and beyond the Neotropics. Three additional genera, Ceraticelus Simon, 1884, Idionella Banks, 1893, and Eulaira Chamberlin & Ivie, 1933, are represented in northern Mexico and/or the West Indies, but are best classified as having a Nearctic or Holarctic distribution. Species previously placed in the typically northern hemisphere genera Gongylidiellum Simon, 1884, Leptorhoptrum Kulczynski, 1894, Macrargus Dahl, 1886, Minyriolus Simon, 1884, Oedothorax Bertkau, 1883, Phanetta Keyserling, 1886, and Tmeticus Menge, 1868 are found to be misplaced or nomina dubia; two genera endemic to the Neotropics, Clitistes Simon, 1902 and Zilephus Simon, 1902 are nomina dubia. The genus Beauchenia Usher, 1983 is an erigonine, not a mynoglenine; there are no known representatives of the Mynogleninae in the Neotropics. One hundred and forty new combinations are established; 19 genera are synonymized including Micromaso Tambs‐Lyche, 1954, revalidation rejected; 34 species are synonymized. The following new genera are established: Gigapassus gen. nov. , Intecymbium gen. nov. , Moyosi gen. nov. , Orfeo gen. nov. and Toltecaria gen. nov. Malkinella Millidge, 1991 and Valdiviella Millidge, 1985 are preoccupied; Malkinola nom. nov. and Valdiviola nom. nov. are established as replacement names. The following new species are described: Asemostera daedalus sp. nov. , Asemostera enkidu sp. nov. , Asemostera janetae sp. nov. , Fissiscapus attercop sp. nov. , Gonatoraphis lysistrata sp. nov. , Gravipalpus standifer sp. nov. , Microplanus odin sp. nov. , Moyosi chumota sp. nov. , Myrmecomelix leucippus sp. nov. , Neomaso damocles sp. nov. , Notiomaso exonychus sp. nov. , Paraletes pogo sp. nov. , Psilocymbium acanthodes sp. nov. , Smermisia holdridgi sp. nov. and Smermisia parvoris sp. nov. The following species remain misplaced in inappropriate genera: Erigone fellita Keyserling, 1886, Erigone zabluta Keyserling, 1886, and Oedothorax fuegianus (Simon, 1902). For 23 species, type specimens could not be located and the species could not be unambiguously identified; the type of Macrargus pacificus Berland, 1924 could not be located, but it is transferred to Laminacauda Millidge, 1985. The female of Onychembolus subalpinus Millidge, 1985 described by Millidge in 1991 is mismatched; this female is Notiomaso exonychus sp. nov. ; the true female of Onychembolus subalpinus was described as both Neomaso bidentatus Millidge, 1991 syn. nov. and Neomaso tridentatus Millidge, 1991 syn. nov. The male and female of Asemonetes[now Asemostera]arcana (Millidge, 1991) are not conspecific; a male thought to be conspecific with the female of A. arcana is newly described; the true female of A. arcana is unknown. The transfer of Emenista dentichelis Berland, 1913 to Laminacauda comb. nov. renders Laminacauda dentichelis Millidge, 1991 a junior homonym; the replacement name Laminacauda baerti nom. nov. is provided for Laminacauda dentichelis Millidge. The following species were erroneously placed in erigonine genera: Oedothorax bisignatus Mello‐Leitão, 1945 is synonymized with Theridion calcynatum Holmberg, 1876 syn. nov. (Theridiidae); Liger incomta O. Pickard‐Cambridge, 1896 is transferred to Theridion Walckenaer, 1805 (Theridiidae) [Theridion incomtum comb. nov. ]; Erigone ectrapela Keyserling, 1886 is transferred to Dictyna Sundevall, 1833 (Dictynidae) [Dictyna ectrapela comb. nov. ]; Erigone peruana Keyserling, 1886 is transferred to Thymoites Keyserling, 1884 (Theridiidae) [Thymoites peruanus comb. nov. ]; Adelonetria dubiosa Millidge, 1991 is not a linyphiid and will be dealt with elsewhere. Lomaita darlingtoni Bryant, 1948 is confirmed as a linyphiid, not a mysmenid. © 2007 The Linnean Society of London, Zoological Journal of the Linnean Society, 2007, 149 (Suppl. 1), 1–263.  相似文献   

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