Ultrarapid endocytotic uptake of large molecules inDunaliella species

Summary This paper describes the uptake of Lucifer Yellow carbohydrazide and fluorescent dextrans labeled with fluorescein isothiocyanate or Sodium Green (molecular masses ranging from 522 to 2 × 10⁶ Da) byDunaliella spp. halotolerant unicellular green algae isolated from salt pools in the Sinai peninsula. The fluorescent dyes were taken up into a set of vesicles around the nucleus and just above the chloroplast. It proved impossible to inhibit uptake of the fluorescent compounds in cells treated with a large variety of metabolic and other inhibitors. Cell labeling was complete within half a minute of addition of fluorescent compounds to the outside medium; efflux was equally rapid. The results are interpreted in terms of an endocytotic process whereby the outside medium, together with any substance dissolved in it, remains within vesicles enclosed within the cell body but cycles rapidly between the plasma membrane and the interior of the cell. The outside medium does not pass across the vesicular membrane, nor enters the cytosol.Abbreviations LYCH Lucifer Yellow carbohydrazide - FITC fluorescein-5-isothiocyanate - TCA trichloroacetic acid - DMSO dimethylsulfoxide - NEM N-ethyl maleimide - DNP dinitrophenol - CCCP m-chlorocarbonyl-cyanide phenylhydrazone - APM amiprophos-methyl     

Fluoroacetamide resistance mutations in Chlamydomonas reinhardtii

Acetamide, a nitrogen and carbon source for Chlamydomonas reinhardtii, is hydrolyzed by acetamidase to ammonium and acetate. It also induces urea pathway activities. Fluoroacetamide (F-acetamide) is toxic to wild-type through conversion to F-citrate, a respiratory inhibitor. Resistant mutants were selected on plates of F-acetamide plus urea. When tested on acetamide plates two mutant classes were obtained, acm⁺ (utilized acetamide as sole N source) and acm^-. All acm⁺ isolates had acetamidase activity and were obligate phototrophs (i.e. dark-diers). Acm^- isolates had either normal urea assimilation (ure⁺) or lacked all urea pathway activities, namely transport, urea carboxylase and allophanate hydrolase (ure^-). Inheritance patterns for both types indicated single nuclear gene mutations. The acm^- ure⁺ type presumably resulted from a defective acetamidase gene, and the acm^- ure^- strains might be regulatory gene mutants. Temperature conditional F-acetamide tolerant mutants were also obtained. Acetamidase extracted from one such strain was more thermolabile than the wild-type enzyme, indicating a mutation in the coding region. The hypothesis that acetamidase is involved in urea assimilation was not supported by the genetic and biochemical evidence.Abbreviations F-acetamide fluoroacetamide - F-acetate fluoroacetate - TAP tris-acetate-phosphate medium - CDB Chlamydomonas dilution buffer - TCA trichloroacetic acid - AH allophanate hydrolase - UC urea carboxylase - PAR photosynthetically active radiation - DCMU 3-(3,4-dichlorophenyl)-1,1-dimethylurea     

Amide metabolism of Chlamydomonas reinhardi

Chlamydomonas reinhardi can utilise the lower aliphatic amides (C₁–C₄) as nitrogen sources. Of these only acetamide can serve as a sole carbon source. The acetamide analogue F-acetamide kills cells after conversion to F-acetate and F-citrate. This conversion is controlled by exogenous ammonia and, in part, acetate levels. Only one enzyme and one active site are involved in acetamidase function. Enzymatic analysis indicates an increased substrate range as compared to the growth — supported range, indicating uptake, toxicity or metabolic control restrictions.Abbreviations TCA trichloroacetic acid - TAP tris-acetate-phosphate medium - MIC mimmum inhibitory concentration - BSA bovine serum albumin     

Ribonuclease activity during Gl arrest of the yeast Saccharomyces cerevisiae

When cells of the yeast, Saccharomyces cerevisiae, were deprived of nitrogen, a condition leading to Gl arrest, there was an immediate increase in the levels of total ribonuclease (RNase) activity within these cells. During starvation, only the cells arrested in Gl showed increased RNase activity. Although the RNase activities of extracts of starved and actively growing cells were similarly influenced by pH, the activities of starved cells were less stable on both storage and heating. Differences were also noted in substrate specificity. The results of this study suggest that arrest within Gl may increase RNase activity. However, all RNases did not appear to be influenced equally, since the total pool of RNase activity from log phase and Gl arrested cells showed differences in stability and substrate specificity.Non-standard abbreviations YNB, MIN liquid synthetic media (Johnston et al., 1977a) - YNB-N nitrogen-free medium - MIN-S sulfate-free medium - TCA trichloroacetic acid     

Microbial dehalogenation of trichloroacetic acid

A pure bacterial culture and a two-membered mixed culture were isolated that degraded trichloroacetic acid if a second, readily metabolizable substrate was present in the growth medium. Previous doubts over the microbial dehalogenation of trichloroacetic acid (TCA) may be due to its inability to act as a sole carbon and energy source. TCA dehalogenation was associated with conventional 2-haloalkanoic acid dehalogenases but oxalate, the putative dehalogenase product, was not detected. CO₂ was produced rapidly and concomitantly with Cl^– ion release during dehalogenation of TCA. An alternative mechanism is suggested for TCA dehalogenation via an initial decarboxylation reaction. This mechanism predicts that carbon monoxide is a product of TCA decarboxylation and it was significant that one of the organisms isolated,Pseudomonas carboxydohydrogens, was a carboxytroph and a second was an unidentified facultative methylotroph.     

Dark-induced chloroplast dedifferentiation in Euglena gracilis

Transfer of light-grown autotrophic Euglena gracilis cells to darkness and carbon (glucose) containing heterotrophic media causes structural and functional decomposition of the photosynthetic apparatus. The process can be ascribed to a strict diluting-out mechanism of stroma constituents among the progeny, as shown for ribulose-1,5-bisphosphate carboxylase (RuBPCase, EC 4.1.1.39), and aminoacyl-tRNA synthetases (Aa-RS; especially Leu-RS, EC 6.1.1.4) activities. The diluting-out effect of thylakoid membranes and chlorophyll seems to be superimposed by additional degradations, beginning soon after the transfer of cells to darkness. Cultivation of cells in darkness in 0.03 M KCl or without utilizable organic carbon (resting media) preserves chloroplast structure and function over a long period, indicating negligible turnover in these cells. Thus, under both growing and resting conditions, darkness induces the arrest of synthesis of plastid constituents. Experiments with the inhibitors cycloheximide, chloramphenicol, and nalidixic acid demonstrate that chloroplast dedifferentiation does not require organelle gene expression, but it is more strictly dependent on biosynthetic events in the nucleo-cytoplasmic compartment than the reverse process, light-induced chloroplast formation. Since cycloheximide at low concentrations in growth medium causes a marked suppression of precursor uptake or re-utilization similar to that in cells of resting media, intracellular precursor deficiency is suggested to control the observed blockade in cytoplasmic synthesis of plastid proteins. On the other hand, darkness might signalize the stop of gene expression in the organelles.Abbreviations Aa aminoacid - CH cycloheximide - CM chloramphenicol - Leu-RS leucyl-tRNA synthetase - RuBP ribulose-1,5-bisphosphate - TCA trichloroacetic acid     

Excretory nitrogen metabolism in the Chinese fire-belly newt<Emphasis Type="Italic"> Cynops orientalis</Emphasis> in water,on land,or in high concentrations of environmental ammonia

The Chinese fire-belly newt Cynops orientalis reverts to an aquatic mode of living when sexually mature. Despite living in water, sexually mature C. orientalis maintained high capacity for hepatic urea synthesis. However, it had a lower rate of urea production than other terrestrial amphibians because endogenous ammonia could diffuse out to the external medium as NH₃. This conserves cellular energy because urea synthesis is energetically expensive. Simultaneously, C. orientalis also reduced the rate of urea excretion, and excreted 33% of the total nitrogenous waste as ammonia. Upon exposure to land, C. orientalis increased the rate of urea synthesis from accumulating endogenous ammonia. The increased rate of urea synthesis was within the inherent capacity of the hepatic ornithine–urea cycle; there was no induction of hepatic carbamoyl phosphate synthetase or ornithine transcarbamoylase activities and there was no reduction in ammonia production. When exposed to water containing 75 mmol.l^–1 NH₄Cl, the rates of both urea synthesis and urea excretion increased. Under such experimental conditions, the ornithine–urea cycle may be operating close to its limit; glutamine began to accumulate in the body, and endogenous ammonia production via amino acid catabolism was reduced.Abbreviations CPS carbamoyl phosphate synthetase - FAA free amino acid - OTC ornithine transcarbamoylase - OUC ornithine–urea cycle - TCA trichloroacetic acid Communicated by I.D. Hume     

Redistribution of phosphate deposits in the algaScenedesmus quadricauda deprived of exogenous phosphate—an ultra-cytochemical study

Summary The green algaScenedesmus quadricauda (Turp.) Bréb. was cultivated in the presence or absence of orthophosphate and synchronized daughter or mother cells were cytochemically stained. Forin situ capturing of water soluble phosphates Ca²⁺ and Mg²⁺ ions were added to the ice-cold glutaraldehyde fixative to form a polymeric metal-phosphate complex which was equivalent to the energy-rich condensed polyphosphates in staining by alkaline lead acetate. The X-ray microanalysis of the extensive stained deposits proved the presence of phosphorus. In orthophosphate-supplied daughter cells cytoplasmic vacuoles contained round stained bodies; a layer of phosphate-containing paracrystals encompassing some starch grains and a fine stained layer delineating the chloroplast envelope were also observed. In the equivalent mother cells only the material inside theloculi of stacked thylakoids was stained. In orthophosphate starved daughter cells filamentous phosphate-containing paracrystals filled extensive cytoplasmic vacuoles. A stained layer covered the chloroplast envelope and continuous stained layers appeared inside theloculi of stacked thylakoids. Mother cells that develop from these daughter cells were filled with starch grains and showed only peripheral stained deposits. The results are compared with the biochemical evidence of phosphate turnover in algal cells.Abbreviations ADP adenosine diphosphate - ATP adenosine triphosphate - ATPase adenosine triphosphatase - EDAX energy dispersive analysis of X-rays - Pi orthophosphate - PPi pyrophosphate - PP polyphosphate - PhAR photosynthetic active radiation - TCA trichloroacetic acid     

Xanthine accumulation and vacuolization inChlamydomonas reinhardtii cells

Summary Utilization of xanthine as the sole nitrogen source for growth byChlamydomonas reinhardtii cells involved the formation of a transient, intracellular pool of xanthine. Up to 20% of the total xanthine supplied to the medium was not assimilated after uptake but stored in the cells at concentrations that exceeded xanthine solubility in water. At the subcellular level, a massive accumulation of starch grains in the chloroplast and the appearance of many vacuoles in the cytoplasm distinguished xanthine-grown from ammonium-grown cells. Starch accumulation, but not development of vacuoles, was also observed in N-starved cells. Uptake experiments with radio-labelled xanthine showed that this accumulates only in the cytoplasm, most probably inside vacuoles. The electron-dense material observed in vacuoles of xanthine-grown cells suggests that the intracellular xanthine is in part solid xanthine.     

Immunolocalization of abscisic acid by monoclonal antibodies in Lavandula stoechas L. leaves

A monoclonal antibody was used to localize abscisic acid in Lavandula stoechas L. plants treated with 1 M abscisic acid. ABA localization was performed using EDC as the only fixative, which preserves antigenicity and improves the specificity of monoclonal antibodies. A relationship was observed between the effect of abscisic acid on chloroplast ultrastructure and ABA accumulation. Gold particles accumulated on swollen chloroplasts. Our findings provide cytochemical evidence that the chloroplast is a trapping compartment, and yield valuable information on the relation between chloroplast ultrastructure and ABA accumulation.Abbreviations ABA abscisic acid - BSA bovine serum albumin - EDC 1-(3-dimethyl-aminopropyl)-3 ethyl carbodiimide - IgG immunoglobulin G - mAB monoclonal antibodies - pAB polyclonal antibodies     

Adenylate energy charge during batch culture of Thermoactinomyces vulgaris 42

The adenylate energy charge of thermophilic actinomycete Thermoactinomyces vulgaris 42 cells growing exponentially on mineral medium with glucose and casein was around 0.95. After the glucose exhausion, the energy charge fell steadily to a value of 0.5 and remained constant for at least 5 h. The ATP content was found to be a suitable gowth monitoring parameter for Thermoactinomyces vulgaris 42.Abbreviations TCA trichloroacetic acid     

Water conservation and protein metabolism in northern elephant seal pups during the postweaning fast

Urine production and N output were monitored in northern elephant seal (Mirounga angustirostris) pups progressing through 10 weeks of a natural postweaning fast. Urine output declind by 84% (to 69±12 ml·day^–1) at 10 weeks (P<0.05). Glomerular filtration rate at 10 weeks was 51% of the 67±3 ml serum·min^–1 observed during week 1 (P<0.05). Urine N excretion fell by 69% to 1.2±0.17 g·day^–1, while urinary concentration increased (P<0.05). Serum urea declined from an initial 11 mmol·1^–1 to 5–7 mmol·1^–1 by 5 weeks. The fall in urinary N loss (and thus amino acid oxidation) was concomitant with depressed metabolic rate. Therefore, protein contributed little toward meeting energy demands (i.e., <4% of average metabolic rate) throughout fasting. These data indicate that fasting pups improve water conservation and minimize protein catabolism during prolonged natural fasts without an exogenous source of water.Abbreviations AA amino acid(s) - AMR average metabolic rate - ANOVA one-way analysis of variance - BMR basal metabolic rate - BUN blood urea nitrogen - EP end product - EWL evaporative water loss - [Gr]_s serum creatinine concentration - GFR glomerular filtration rate - LBM lean body mass - LML Long Marine Laboratory - MR metabolic rate - NEFA non-esterified fatty acids - RMR resting metabolic rate - TCA tricarboxylic acid - U:C ulinary urea: creatinine concentration ratio     

A comparison of the requirements for various carbon and nitrogen sources and vitamins in some Frankia isolates

Summary It was established that anAlnus glutinosa isolate (LDAgp 1) is able to utilize mono- and disaccharides and shows a limited growth ability on arabinose and starch. This contrasts with an isolate fromAlnus viridis (AvcI 1) andComptonia peregrina (CpI1), which apparently lack glycolytic pathway activity. These latter isolates can utilize some tricarboxylic acids in contrast to LDAgp1. Volatile fatty acids or their salts, such as propionic acid and acetate, were utilized by all three isolates. Besides a general ability to utilize inorganic nitrogen sources, some amino acids and urea, selected isolates showed a limitedability to utilize adenine and uracil. A simple, synthetic medium based on propionic acid as the energy source was developed. On this medium some isolates showed growth stimulation in the presence of biotin. The metabolic aspects of the utilization of carbon and nitrogen sources, as well as some ecological consequences are discussed.     

Studies of Elodea nuttallii grown under photorespiratory conditions. II. Evidence for bicarbonate active transport

Abstract. Elodea nuttallii was grown under greenhouse conditions in domestic wastewater in an aquatic treatment system under conditions conducive to photorespiration. Initial research on the photosynthetic characteristics of E. nuttallii suggest that the submergent macrophyte possessed a carbon concentrating mechanism. Isotopic disequilibria H¹⁴CO₃-uptake studies (5-80s) were used to assess the bicarbonate active-transport capabilities in E. nuttallii leaves. Using a range of substrate concentrations (50-50200mmol m^?3), the accumulation of label (mmol g^?1 Chl) over time due to transport was found initially to exceed accumulation due to fixation until steady state rates were observed. Internal steady state pools of dissolved inorganic carbon (DIC) ranged from 40 to 80 mol m^?3. The concentration factor (CF: the ratio of internal cyroplasmic (DIC] to external medium [DIC]) decreased from 800 to 114 as external bicarbonate concentrations were increased. Inhibition of transport by uncouplers (2,4-dinitrophenol (DNP), carbonyl cyanide-m-chlorophenylhydrazone (CCCP)); ATPase inhibitors (dicylcohexocarbodiamide (DCCD), phloridzin, arsenate); electron transport inhibitors (DCMU, Antimycin A), and carbonic anhydrase inhibitors (ethoxyzolamide, acetazolamide) suggest that bicarbonate transport required (1) a proton motive force, (2) a functional ATPase, (3) a chloroplast carbon sink, and possibly (4) a CA-like moiety associated with the transport protein. While plasmalemmasomes were not observed, the plasmalemma was vesiculated and acid and alkaline banding was observed when leaves were incubated under light in the presence of bicarbonate. These data are consistent with the operation of a bicarbonate-cation symport which concentrates substrate against a concentration gradient at the expense of metabolic energy. The presence of an active transport system for bicarbonate ensures that internal carbon concentrations are high when carbon dioxide, is scarce and bicarbonate is the only carbon species available in aquatic treatment systems during photorespiratory conditions. Therefore, E. nuttallii is particularly well suited for use in these systems.     

Using bacteria to analyze sequences involved in chloroplast gene expression

The complete nucleotide sequence of chloroplast DNA from a liverwort, Marchantia polymorpha has made clear the entire gene organization of the chloroplast genome. Quite a few genes encoding components of photosynthesis and protein synthesis machinery have been identified by comparative computer analysis. Other genes involved in photosynthesis, respiratory electron transport, and membrane-associated transport in chloroplasts were predicted by the amino acid sequence homology and secondary structure of gene products. Thirty-three open reading frames in the liverwort chloroplast genome remain unidentified. However, most of these open reading frames are also conserved in the chloroplast genomes of two species, a liverwort, Marchantia polymorpha, and tobacco, Nicotiana tabacum, indicating their active functions in chloroplasts.Abbreviations bp base pair - kDa kilodalton - IR inverted repeat - ORF open reading frame - DALA -aminolevulinate     

Isolation and characterization of gas vesicles from Microcyclus aquaticus

Intact gas vesicles of Microcyclus aquaticus S1 were isolated by using centrifugally accelerated flotation of vesicles and molecular sieve chromatography. Isolated gas vesicles were cylindrical organelles with biconical ends and measured 250×100 nm. The gas vesicle membrane was composed almost entirely of protein; neither lipid nor carbohydrate was detected, although one mole of phosphate per mole of protein was found. Amino acid analysis indicated that the protein contained 54.6% hydrophobic amino acid residues, lacked sulfur-containing amino acids, and had a low aromatic amino acid content. The protein subunit composition of the vesicles was determined by gel electrophoresis in (i) 0.1% sodium dodecyl sulfate at pH 9.0 and (ii) 5 M urea at pH 2.0. The membrane appeared to consist of one protein subunit of MW 50 000 daltons. Charge isomers of this subunit were not detected on urea gels. Antiserum prepared against purified gas vesicles of M. aquaticus S1 cross-reacted with the gas vesicles of all other gas vacuolate strains of M. aquaticus, as well as those of Prosthecomicrobium pneumaticum, Nostoc muscorum, and Anabaena flos-aquae, indicating that the gas vesicles of these widely divergent organisms have some antigenic determinants in common.Abbreviations SDS sodium dodecyl sulfate - MW molecular weight - Tris tris(hydroxymethyl)aminomethane - EDTA disodium ethylenediaminetetraacetic acid - BSA bovine serum albumin - TCA trichloroacetic acid - P _c pressure necessary to collapse gas vesicles     

Peptide transport by germinating barley embryos

Glycylsarcosine, a dipeptide which is resistant to peptidase activity, was accumulated intact against a concentration gradient by germinating embryos of Hordeum vulgare L., var. Maris Otter, Winter. This is the first clear evidence for the presence of a dipeptide transport system involved in the movement of protein reserves across the scutellum from the endosperm to the embryo during germination.Abbreviations gly-sar glycylsarcosine - TCA trichloroacetic acid     

Osmotic and metabolic responses to dehydration and urea-loading in a dormant,terrestrially hibernating frog

Physiological responses to dehydration in amphibians are reasonably well documented, although little work has addressed this problem in hibernating animals. We investigated osmotic and metabolic responses to experimental manipulation of hydration state in the wood frog (Rana sylvatica), a terrestrial hibernator that encounters low environmental water potential during autumn and winter. In winter-conditioned frogs, plasma osmolality varied inversely with body water content (range 69–79%, fresh mass) primarily due to increases in sodium and chloride concentrations, as well as accumulation of glucose and urea. Decreased hydration was accompanied by a marked reduction in the resting rate of oxygen consumption, which was inversely correlated with plasma osmolality and urea concentration. In a separate experiment, resting rates of oxygen consumption in fully hydrated frogs receiving injections of saline or saline containing urea did not differ initially; however, upon dehydration, metabolic rates decreased sooner in the urea-loaded frogs than in control frogs. Our findings suggest an important role for urea, acting in concert with dehydration, in the metabolic regulation and energy conservation of hibernating R. sylvatica.     

Characterization of a protein of the plastid inner envelope having homology to animal inorganic phosphate,chloride and organic-anion transporters

A protein from Arabidopsis thaliana (L.) Heynh. showing homology to animal proteins of the NaPi-1 family, involved in the transport of inorganic phosphate, chloride, glutamate and sialic acid, has been characterized. This protein, named ANTR2 (for anion transporters) was shown by chloroplast subfractionation to be localized to the plastid inner envelope in both A. thaliana and Spinacia oleracea (L.). Immunolocalization revealed that ANTR2 was expressed in the leaf mesophyll cells as well as in the developing embryo at the upturned-U stage. Five additional homologues of ANTR2 are found in the Arabidopsis genome, of which one was shown by green fluorescent protein (GFP) fusion to be also located in the chloroplast. All ANTR proteins share homology to the animal NaPi-1 family, as well as to other organic-anion transporters that are members of the Anion:Cation Symporter (ACS) family, and share the main features of transporters from this family, including the presence of 12 putative transmembrane domains and of a 7-amino acid motif in the fourth putative transmembrane domain. ANTR2 thus represent a novel protein of the plastid inner envelope that is likely to be involved in anion transport.Abbreviations ACS Anion:Cation Symporter - GFP green fluorescent protein - Pi inorganic phosphate     

Regulation of urea uptake inPseudomonas aeruginosa

The energy-dependent urea permease was studied in two strains ofPseudomonas aeruginosa, measuring the uptake (transport and metabolism) of¹⁴C-urea. In both strains urea uptakein vivo and urease activityin vitro differed significantly with respect to kinetic parameters, temperature and pH dependence and response to metabolic inhibitors. Ammonium strongly interfered both with the expression of the urea uptake system and its activity. The inhibition of the uptake activity by ammonium was partially relieved by hydraziniumsulfate, which prevented the translocation of ammonium into the cell, and in a methylammonium/ammonium transport-defective mutant of strain DSM 50071. Furthermore, methionine-sulfoximine, which prevented the intracellular glutamine formation from ammoniumvia inhibition of glutamine synthetase, relieved the inhibition of urea uptake by ammonium. These findings suggested that urea uptake activity inP. aeruginosa is regulated by intracellular glutamine.Abbreviations CCCP carbonylcyanide-m-chlorphenylhydrazone - DCCD dicyclohexylcarbodiimide - GS glutamine synthetase - MSX methionine-sulfoximine