Bacteria associated with ectomycorrhizas of slash pine (Pinus elliottii) in south-eastern Queensland, Australia

Bacterial communities associated with ectomycorrhizal and uncolonized roots of Pinus elliottii (slash pine) collected from a plantation in south-east Queensland, Australia, were investigated, using cultivation-dependent and -independent methods. Denaturing gradient gel electrophoresis (DGGE) analysis of 16S rRNA gene PCR products obtained using a cultivation-independent approach revealed that bacterial communities associated with ectomycorrhizal root tips differed significantly from those associated with roots uncolonized by ectomycorrhizal fungi. DGGE analysis of cultivable bacterial communities revealed no significant difference between ectomycorrhizal and uncolonized roots. Neither analytical approach revealed significant differences between the bacterial communities associated with ectomycorrhizal roots colonized by a Suillus sp. or an Atheliaceae taxon. Cloned bacterial 16S rRNA genes revealed sequence types closely related with that of Burkholderia phenazinium, common in both ectomycorrhizal-colonized and -uncolonized roots, while sequence types most similar to the potentially phyopathogenic bacteria Burkholderia andropogonis and Pantoea ananatis were only detected in ectomycorrhizal roots. These results highlight the possibility of global movement of microorganisms, including putative pathogens, as a result of the introduction of exotic pine plantations.     

Plant regeneration through multiple adventitious shoot differentiation from callus cultures of slash pine (Pinus elliottii)

A plant regeneration system through multiple adventitious shoot differentiation from callus cultures has been established in slash pine (Pinus elliottii). Influences of seven different basal media on callus induction, adventitious shoot formation, and rooting were investigated. Among the different basal media, B5, SH, and TE proved to be suitable for callus induction and plantlet regeneration. Multiple adventitious shoot formation was obtained from callus cultures of slash pine on B5, SH, and TE media containing indole-3-butyric acid, N6-benzyladenine, and thidiazuron. Scanning electron microscopy demonstrated the early development of adventitious shoots derived from callus cultures. These results indicate that an efficient plant regeneration protocol for micropropagation of slash pine had been established. This protocol could be most useful for future studies on genetic transformation of slash pine.     

A partial genetic linkage map of slash pine (Pinus elliottii Engelm. var. elliottii) based on random amplified polymorphic DNAs

A set of 420 random, 10-base, oligonucleotide primers was screened for random amplified polymorphic DNA (RAPD) fragments within a sample of eight megagametophyte DNAs of a single slash pine (Pinus elliottii Engelm. var. elliottii) tree. The apparently repeatable RAPD fragments were further characterized within a sample of 68 megagametophytes from the same tree. Fragments segregating in a 11, present-to-absent, ratio were classified and mapped using multi-point linkage analysis. The analysis revealed 13 linkage groups of at least three loci, ranging in size from 28 to 68 cM, and nine linked pairs of loci. The 22 groups and pairs included 73 RAPD markers and covered a genetic map distance of approximately 782 cM. Genome size estimates, based on linkage data, ranged from 2880 to 3360 cM. Using a 30-cM map scale and including the 24 unlinked markers and the ends of the 13 linkage groups and nine linked pairs, the set of RAPD markers accounts for approximately 2160 cM or 64–75% of the genome. This extent of genomic coverage should allow for the efficient mapping of genes responsible for a reaction to the causal agent of fusiform rust disease, Cronartium quercuum (Berk.) Miyabe ex Shirai f. sp. fusiforme.     

Bacterial stimulation of adventitious rooting on in vitro cultured slash pine (Pinus elliottii Engelm.) seedling explants

A bacterium has been isolated that initiates adventitious rooting when co-cultured under in vitro conditions with seedling-produced hypocotylary explants of slash pine (Pinus elliottii). Rooting efficiencies produced through bacterial-explant co-culture range from approximately 15% to greater than 90% over non-treated controls. Explant exposure to the root inducing bacterium has produced no obvious pathology in the regenerated plantlets. Seedling explants rooted by bacterial-explant co-culture have been successfully transitioned to ambient greenhouse conditions.     

Somatic embryogenesis in slash pine (Pinus elliottii Engelm): improving initiation of embryogenic tissues and maturation of somatic embryos

Plant Cell, Tissue and Organ Culture (PCTOC) - Slash pine (Pinus elliottii Engelm.) has strong adaptability, early growth and high turpentine yield, and it is widely planted in southern China....     

Effects of Hurricane Andrew on stands of slash pine (Pinus elliottii var. densa) in the everglades region of south Florida (USA)

Few hurricanes affect intact stands of subtropical pines. We examined effects of winds in the eyewalls of Hurricane Andrew, where wind speeds were >200 km h^–1, on all remaining large mainland stands of Pinus elliottii var. densa (south Florida slash pine) on limestone outcroppings (rocklands) in the everglades region of southern Florida. We measured densities and sizes of trees and assessed damage and mortality in plots in old-growth stands in the Lostman's Pines (LOP) region of Big Cypress National Preserve and in second-growth stands in the Pines West (PIW) and Long Pine Key (LPK) regions of Everglades National Park. We also examined age-size relationships using sections from trees killed by the hurricane in LOP and LPK. We used the data to predict effects of recurrent hurricanes on the structure and dynamics of the old-growth stand and to compare effects of hurricanes on old- and second-growth stands.Slash pine was resistant to hurricane winds. Most trees in stands (68–76%) were not severely damaged; mortality in the three regions averaged 17–25% shortly after the hurricane and 3–7% during the following year. Mortality was positively associated with tree size; mean tree sizes decreased and size-selective thinning occurred in all stands. Nonetheless, local mortality ranged from 3–4% to 50–60% among plots in all stands. Such local variation in mortality resulted from clustering of large trees, especially in old-growth stands, and from microbursts during the hurricane, which affected all stands. Recurrent, intense hurricanes are predicted to kill larger trees, slowly opening new patches and increasing sizes of extant patches, thus resulting in almost continual presence of openings suitable for recruitment in old-growth stands. Age-size relationships also indicated that large trees in old-growth stands may survive 2–3 centuries. The combination of frequent openings and wind resistance of large trees is predicted to result in old-growth stands that are highly uneven aged, with trees locally distributed in similar-aged patches. The extent to which such stands deviate from demographic equilibrium, as well as turnover rates within stands, are likely to increase as the frequency of recurrent, intense hurricanes increases.Damage and mortality differed in old- and second-growth stands. Large trees were more, but small trees less likely to be damaged in old- than second-growth stands. In contrast, mortality was significantly lower in old- (LOP: 16.9% ± 3.1 [mean ± s.e.]) than second-growth stands (PIW: 22.5% ± 2.0; LPK: 25.2% ± 2.7). Total hurricane-related mortality was 30–60% higher in second- than old-growth stands. Size class structure, more uneven in old- than second growth stands prior to the hurricane, diverged even more afterwards. Hurricane Andrew removed     

国外松衰退病原因的研究

对安徽省国外松大面积衰退和枯死原因的调查研究表明,造成这种衰退和枯死的现象是多方面因素共同作用的结果,是一种林木衰退病,该衰退病的发生原因：1）诱发因素：温度年较差较大、年降雨量分布不均镁、土壤粘重板结或容重过大、地势低汪积水、土壤瘠薄、林分密度过大;2）激化因素：干旱严重重复发生、割脂过早过度、霜冻、食叶害虫等害虫危害;松针褐斑病等病害侵害;3）促进因素：松枯梢病菌、根腐病菌、立木腐配病菌、天牛、小蠹虫等害虫危害。     

Growth and nutritional response of Pinus pinaster after a large pine weevil (Hylobius abietis) attack

Hylobius abietis is an important pest of coniferous plantations in Europe, to which high mortality, stem deformities, and growth loss are typically attributed. In pine trees, as in other long-lived organisms, there is uncertainty regarding the long-term costs of short-term resistance against invading organisms. We examined the nutritional status of Pinus pinaster after a 2-year long H. abietis attack, measuring needle and phloem N and P concentrations, and the impact of the damage on subsequent growth, survival, and stem deformities over a period of 5 years. The study sites were a P. pinaster family × fertilization trial, and a neighbouring twin trial with similar climate and soil characteristics that was not attacked. Growth losses after the H. abietis attack were important (up to 40%), but restricted to the first years after the attack. Five years after the attack, the annual height increment of pines in the attacked stand was not related to the initial damage suffered, and plants showed regular stems, normal leader dominance, and regular height after 5 years. These findings suggest strong compensatory growth in P. pinaster and indicate relatively high tolerance to the large pine weevil. Needle nutrient concentrations in the healthy stand were, as expected, significantly greater in experimentally fertilized plants, and they were linearly related to those in phloem showing equilibrated stoichiometry both for nitrogen (r = 0.86; P < 0.01; N = 25) and phosphorus (r = 0.84; P < 0.01; N = 25). However, at the attacked stand, nutrient concentrations in the needles did not follow the experimentally manipulated nutrient availability in soils, and phosphorus concentration in the needles was unexpectedly not related to those in the phloem. The pine seedlings attacked by H. abietis showed altered potential of allocating nutrients to their tissues according to the nutrient availability existing in the soil, as well as altered stoichiometry in N and P concentrations among phloem and leaves. Maritime pine seems to be tolerant to the pine weevil attack, at least in the conditions of this study, where pine weevil damage caused a deep alteration of nutrient allocation and nutritional status. Further research is needed to elucidate to what extent altered nutrient allocation may be part of an induced response to the attack or just derived from the vascular injury caused by the weevil wounding in the phloem.     

Distribution and Ecology of Campylobacters in Coastal Plain Streams (Georgia, United States of America)

Campylobacter is the leading cause of bacterium-associated diarrhea in the United States and most developed countries. While this disease is considered a food-borne disease, many clinical cases cannot be linked to a food source. In rural and agrarian areas environmental transmission may be an important factor contributing to case loads. Here we investigated the waterborne prevalence of campylobacters in a mixed-use rural watershed in the coastal plain of southern Georgia (United States). Six sites representing various degrees of agricultural and human influence were surveyed biweekly to monthly for 1 year for the presence of culturable thermophilic campylobacters and other measures of water quality. Campylobacters were frequently present in agriculture- and sewage-impacted stretches of streams. The mean campylobacter counts and overall prevalence were highest downstream from a wastewater treatment plant that handled both human and poultry slaughterhouse waste (≤595 CFU ml⁻¹; 100% positive); the concentrations were significantly higher than those for the four upstream sites (P < 0.05). The counts were significantly correlated with the number of fecal coliform bacteria, conductivity, pH, and concentrations of nutrients (NO₃⁻, PO₄³⁻, and NH₃). Campylobacters were isolated more frequently and larger numbers were present during the summer months, similar to the occurrence of clinical cases of campylobacteriosis in this region. A multivariate model showed that the levels were significantly influenced by increasing precipitation, which also peaked in the summer. The results indicate that loading from both human and domestic animal waste may be high in the watershed studied during the summer months. Mixed-use watersheds supporting agriculture production, human populations, and wildlife may be at risk for contamination by campylobacters and may be an important route for human exposure.     

Growth response of Sabina tibetica to climate factors along an elevation gradient in south Tibet

We examine the climate significance in tree-ring chronologies retrieved from Sabina tibetica Kom. (Tibetan juniper) at two sites ranging in elevation from 4124 to 4693 m above sea level (a.s.l.) in the Namling region, south Tibet. The study region is under the control of semi-arid plateau temperate climate. The samples were grouped into high- and low-elevation classes and standard ring-width chronologies for both classes were developed. Statistical analysis revealed a decreasing growth rate yet increasing chronology reliability with increasing elevation. Overall, correlation analyses showed that radial growth in S. tibetica at the study sites was controlled by similar climatic factors, regardless of elevation; these factors comprised early winter (November) and early summer (May–June) temperatures as well as annual precipitation (July–June). Slight differences in the correlation between tree growth along the elevation gradient and climate variables were examined. The correlations with early winter temperature varied from significantly positive at the low-elevation site to weakly positive at the high-elevation site, whereas the correlations between radial growth and early summer temperature increased from weakly negative at the low-elevation sites to strongly negative at the high-elevation sites. The abundant precipitation through the year may have masked variations in tree growth on different elevation aspects. Our results will aid future dendroclimatological studies of Namling tree rings in south Tibet and demonstrate the potential of S. tibetica Kom. for improving our understanding of environmental impacts on tree growth.     

Connections between climatic variables and the growth and needle dynamics of Scots pine (Pinus sylvestris L.) in Estonia and Lapland

The relationships between climatic variables and Scots pine (Pinus sylvestris L.) growth and needle dynamics were studied in three stands in Estonia and in four stands located near the northern timberline in Lapland. The trees sampled in Estonia had low correlations with the analysed climatic variables (air temperature, precipitation and indices of atmospheric circulation). Moreover, the weak cross-correlation of the time-series of the Estonian sample trees indicated that Scots pine is affected mainly by local factors in that region. In Lapland, however, height increment and needle production correlated strongly among trees within a stand (mean r=0.45 and 0.46, respectively) and between stands (r=0.32 and 0.37). Radial increment also showed a high inter-correlation among the trees within a stand in Lapland (r=0.45). Both height increment and needle production were strongly influenced by the temperature regime of the previous summer in Lapland (mean r=0.64 and 0.64, respectively). Radial increment was correlated with the mean July temperature of the current year (mean r=0.29). The correlations between the indices of atmospheric circulation and tree attributes were weak, while the strongest correlation was between the Ponta Delgada NAO index (PD–NAO) and height increment and needle production in Lapland. Height increment, needle production and radial increment have increased since the 1990s in the trees growing in Lapland. This may indicate a positive effect of climate warming on tree growth in Lapland. In Estonia, where climatic conditions do not limit tree growth, the climate warming seems not to directly influence the growth and needle dynamics of Scots pine.     

Growth and nutrient characteristics in bog and fen populations of Scots pine (Pinus sylvestris)

Nutrient content in peat and growth rate, rate of nutrient accumulation and allocation patterns in Scots pine Pinus sylvestris L. from eleven natural Swedish peatlands were examined. The peatlands studied represented a wide range of climatic conditions and mire types. Whole and even-sized pines with intact root-systems were excavated to give the whole-pine budget for growth and nutrient accumulation. All samples originated from hummock communities.Pine growth and nutrient characteristics were much more variable in the minerogenous sites than in the ombrogenous sites, which indicates a larger environmental heterogeneity within the minerogenous sites. In the ombrogenous sites, rate of pine growth was constant, approximately 1 mg day^-1, and independent of latitudinal variation. There was either no relationship between latitudinal location and growth rate in the minerogenous sites, which suggests that pine growth is largely controlled by site-specific, very local conditions. The growth rate of pines was not correlated with any peat nutrient. The pines allocated a large proportion of their nutrient-pool to the metabolically active current year's growth. This is likely a trait that enables Scots pine to occupy a wide range of peatland types in which it experience a marked imbalance and shortage of nutrients.     

The climate sensitivity of Norway spruce [Picea abies (L.) Karst.] in the southeastern European Alps

To investigate the potential of Norway spruce (Picea abies L. Karst) as a palaeoclimate archive in the southeastern European Alps, tree ring chronologies were developed from trees growing at two sites in Slovenia which differed in their ecological and climatological characteristics. Ring width, maximum latewood density, annual height increment and latewood cellulose carbon isotope composition were determined at both sites and the resulting time-series compared with and verified against instrumental climate data for their common period (AD 1960–AD 2002). Results indicate that ring width sensitivity to summer temperature is very site-dependent, with opposing responses at alpine and lowland sites. Maximum density responds to September temperatures, indicating lignification after cell division has ceased. Stable carbon isotopes have most potential, responding strongly to summer temperature in both alpine and lowland stands. Height increment appears relatively insensitive to climate, and is likely to be dominated by local stand dynamics.     

Modeling the effects of fire and climate change on carbon and nitrogen storage in lodgepole pine (Pinus contorta) stands

The interaction between disturbance and climate change and resultant effects on ecosystem carbon (C) and nitrogen (N) fluxes are poorly understood. Here, we model (using CENTURY version 4.5) how climate change may affect C and N fluxes among mature and regenerating lodgepole pine ( Pinus contorta var. latifolia Engelm. ex S. Wats.) stands that vary in postfire tree density following stand-replacing fire. Both young (postfire) and mature stands had elevated forest production and net N mineralization under future climate scenarios relative to current climate. Forest production increased 25% [Hadley (HAD)] to 36% [Canadian Climate Center (CCC)], compared with 2% under current climate, among stands that varied in stand age and postfire density. Net N mineralization increased under both climate scenarios, e.g., +19% to 37% (HAD) and +11% to 23% (CCC), with greatest increases for young stands with sparse tree regeneration. By 2100, total ecosystem carbon (live+dead+soils) in mature stands was higher than prefire levels, e.g., +16% to 19% (HAD) and +24% to 28% (CCC). For stands regenerating following fire in 1988, total C storage was 0–9% higher under the CCC climate model, but 5–6% lower under the HAD model and 20–37% lower under the Control. These patterns, which reflect variation in stand age, postfire tree density, and climate model, suggest that although there were strong positive responses of lodgepole pine productivity to future changes in climate, C flux over the next century will reflect complex relationships between climate, age structure, and disturbance-recovery patterns of the landscape.     

Endobacteria in some ectomycorrhiza of Scots pine (Pinus sylvestris)

The diversity of cultivable endobacteria associated with four different ectomycorrhizal morphotypes (Suillus flavidus, Suillus variegatus, Russula paludosa and Russula sp.) of Scots pine (Pinus sylvestris) was analysed by restriction fragment length polymorphism profiling of PCR-amplified rDNA intergenic spacer regions and by sequence analyses of 16S rRNA genes. Ectomycorrhizal root tip surface-sterilization methods were developed and assessed for their efficiencies. Bacterial communities from surface-sterilized ectomycorrhizal root tips were different from those of ectomycorrhizal root tips without surface-sterilization for all the morphotypes studied. Endobacteria belonging to the genera Pseudomonas, Burkholderia and Bacillus were isolated from more than one ectomycorrhizal morphotype, whereas species of Rahnella, Janthinobacterium and Rhodococcus were only isolated from the single morphotypes of S. variegatus, R. paludosa and Russula sp., respectively. Some of the isolated endobacteria utilized fungal sugars more readily than typical plant sugars in carbon utilization assays.     

Possible impacts of climate change on natural vegetation in Saxony (Germany)

Recent climate changes have had distinct impacts on plant development in many parts of the world. Higher air temperatures, mainly since the end of the 1980s, have led to advanced timing of phenological phases and consequently to an extension of the general growing season. For this reason it is interesting to know how plants will respond to future climate change. In this study simple phenological models have been developed to estimate the impact of climate change on the natural vegetation in Saxony. The estimations are based on a regional climate scenario for the state of Saxony. The results indicate that changes in the timing of phenophases could continue in the future. Due to distinct temperature changes in winter and in summer, mainly the spring and summer phases will be advanced. Spring phenophases, such as leafing or flowering, show the strongest trends. Depending on the species, the average timing of these phenophases could be advanced by 3–27 days by 2050. Phenophases in autumn show relatively small changes. Thus, the annual growth period of individual trees will be further extended, mainly because of the shift of spring phases. Frequent droughts in summer and in autumn can compensate for the earlier leafing of trees, because in this case leaf colouring and leaf fall would start some weeks earlier. In such cases, the growing period would not be really extended, but shifted to the beginning of the year.     

Intra-annual radial growth of Schrenk spruce (Picea schrenkiana Fisch. et Mey) and its response to climate on the northern slopes of the Tianshan Mountains

Schrenk spruce (Picea schrenkiana Fisch. et Mey.) is widely distributed in the Tianshan Mountains. In this study, four Schrenk spruce trees were continuously monitored with dendrometers from 27 April to 30 September 2014 on the northern slopes of the Tianshan Mountains in northwest China. The goal of this monitoring study was to determine the main growing season of Schrenk spruce and to analyze intra-annual radial growth variability and its relation to daily meteorological factors. Our studies have shown that the critical growing season of Schrenk spruce is from late May to late July and that the rapid growth stage is from mid-June to early July. Meanwhile, in the growing season, changes in the radial growth of Schrenk spruce were negatively correlated with daily temperature, evaporation, sunshine hours and vapor pressure deficit (VPD), and were positively correlated with precipitation and relative humidity (RH). The correlation coefficient between radial growth and RH can be as high as 0.750 (Pearson, p < 0.0001, n = 60). Dates in which precipitation occurred corresponded to periods of rapid growth. The results of the climate-growth analysis show that changes in radial growth reflect the effect of water stress on tree growth, whether or not the changes are positively or negatively correlated with the above climatic factors. This indicates that moisture plays a major role in the growth of Schrenk spruce. We suggest that precipitation between late May to late June is a limiting factor for radial growth of Schrenk spruce on the northern slopes of the Tianshan Mountains.     

Marine carbonate facies in response to climate and nutrient level: The upper carboniferous and permian of central spitsbergen (Svalbard)

Summary Carbonate-dominated successions of the Gipsdalen and Tempelfjorden Groups from Svalbard record a significant shift from Photozoan to Heterozoan particle associations in neritic settings during the late Palaeozoic. During the Bashkirian, benthic particle associations which included photoautotrophs such as phylloid algae (Chloroforam Association) characterised shallow subtidal environments. Most depositional settings which endured siliciclastic terrestrial input exhibited poorly diversified associations dominated by brachiopods, bryozoans and siliceous sponges (Bryonoderm Association). During the Moscovian to Asselian, highly diversified associations typified by various calcareous green algae,Palaeoaplysina, Tubiphytes, fusulinids, smaller and encrusting foraminifers (Chloroforam Association) prevailed in carbonate sediments from supratidal to shallow subtidal environments. During the Sakmarian and Early Artinskian, oolitic carbonate sands (Chloroforam Association) typified intertidal flats, whereas shallow subtidal environments were occupied by moderately diversified associations with fusulinids, smaller foraminifers, echinoderms and bryozoans (Bryonoderm-extended Association) and poorly diversified associations with echinoderms, brachiopods and bryozoans (Bryonoderm Association). During the Late Artinskian to Kazanian, poorly diversified associations characterised by brachiopods, echinoderms and bryozoans (Bryonoderm Association), and sponge-dominated associations (Hyalosponge Association) reigned within siliceous carbonates of intertidal and shallow subtidal environments. This trend is interpreted as a result of climatic cooling and fluctuations of prevailing levels of trophic resources within shallow-water settings during the studied time period. While raised nutrient levels were restricted to near-shore settings during the Bashkirian, steady mesotrophic conditions arose from the Sakmarian onward and increased to late Permian times.     

Late Turonian (Cretaceous) climate cooling in Europe: faunal response and possible causes

Isochronous variations of δ¹⁸O curves within several European basins indicate a period of Late Turonian climate cooling, which is characterized by two distinct cooling phases, separated by a period of climate stability. Literature data for macrofauna (ammonites, echinoids, and belemnites) indicate that the cooling phases are associated with a southward shift of taxa. Concomitant Late Turonian events (volcanism and relative sea-level changes) suggest the migration to be triggered mainly by relative sea-level falls. The inferred cooling phases are seen in context with a general cooling trend due to the decrease in Mid-Cretaceous volcanogenic CO₂ emission. Short-term stagnation of cooling in the Late Turonian has been probably triggered by renewed volcanism. Due to the general high temperatures during Mid-Cretaceous times, a glacio-eustatic explanation for the coincidence of cooling and sea-level fall is considered unlikely.