Real-time monitoring of oriental fruit moth,Grapholita molesta,populations using a remote sensing pheromone trap in apple orchards

A fusion of information technology (IT) and sex pheromone monitoring provides a remote sensing IT-pheromone trap to monitor Oriental fruit moth, Grapholita molesta, populations in apple orchards. Once a male of G. molesta is attracted to its sex pheromone lure in the trap, an infrared sensor installed at the funnel-shaped orifice generates an electric signal. The signal is processed in a central processor and then transferred to an internet site via a code division multiple access protocol. The signal also contains information about when each male is caught. Daily trapping information from different localities is archived in a website. The accuracy of IT-pheromone traps in detecting male catches was shown by a high correlation (r = 0.956) between the generated IT signals and actual numbers of males caught in the trap in apple orchards. Using this IT-pheromone trap, G. molesta in apple orchards was monitored for one year. These data were compared with monitoring data obtained from a conventional wing type-based sticky trap containing the identical sex pheromone lure. Both showed four characteristic adult peaks from April to September and were significantly correlated (r = 0.695). IT-pheromone traps also gave real-time signals of male catches in the field. These real-time signals of male catches showed a characteristic diel attraction rhythm from 4 pm to midnight. The diel rhythm of the male response to the sex pheromone started earlier in the evening in the spring season compared to mid and late seasons. This study provides a novel sex pheromone trap for G. molesta to monitor its population in field conditions in real-time without visiting or counting. The field monitoring data can be accessed any time through a designated internet website.     

Prevalence and resting behaviour of dengue vectors,Aedes aegypti and Aedes albopictus in dengue high risk urban settings in Colombo,Sri Lanka

Understanding local geographical variation in vector density and bionomics related to virus transmission are critical for planning effective vector control programs to control dengue virus transmission. This study investigated the prevalence and resting behaviour of Aedes aegypti and Ae. albopictus in three dengue high-risk areas in the Colombo District, Sri Lanka. Monthly sampling of resting adult mosquitoes was conducted from August 2019 to February 2020. Thirty-seven percent of the households (289/776) harboured Aedes mosquitoes, and 603 Aedes mosquitoes were collected. The proportion of Ae. aegypti was higher in the overall collection during the collection period (94% [569/603]), and 62% (352/569) were females. Significant monthly variations in Ae. aegypti were observed with respect to the indices: number of females per surveyed house (F/SH; p = 0.001), number of females per Aedes positive house (F/PH; p = 0.029), adult house index (AHI; p = 0.001), adult density (AD; p = 0.005) and resting ratio (RR; p = 0.001). AHI, AD, and RR had statistically significant positive correlations with monthly rainfall (p = 0.001, p = 0.011, and p = 0.002 respectively) and one-month lagged dengue cases (p = 0.002, p = 0.005, and p < 0.001 respectively). A statistically significantly higher proportion of Ae. aegypti females were caught resting indoors (N = 309, 88%) than outdoors (N = 43, 12%; p < 0.001). The most common resting areas were bedrooms (51%) & living/dining rooms (37%), and places were under or on furniture (47%) & hangings (34%) for Ae. aegypti. Conversely, 74% of female Ae. albopictus were collected outdoors. Results of this study could have strong implications to improve vector surveillance and control by early detection of dengue to detect outbreaks and minimization of disease transmission.     

Effects of competition outcome on testosterone concentrations in humans: An updated meta-analysis

A contribution to a special issue on Hormones and Human Competition.Since Archer's (2006) influential meta-analysis, there has been a major increase in the number of studies investigating the effect of competition outcome on testosterone reactivity patterns in humans. Despite this increased research output, there remains debate as to whether competition outcome modulates testosterone concentrations. The present paper examines this question using a meta-analytic approach including papers published over the last 35 years. Moreover, it provides the first meta-analytic estimate of the effect of competition outcome on testosterone concentrations in women. Results from a meta-analysis involving 60 effect sizes and > 2500 participants indicated that winners of a competition demonstrated a larger increase in testosterone concentrations relative to losers (D = 0.20)—an effect that was highly heterogeneous. This ‘winner-loser’ effect was most robust in studies conducted outside the lab (e.g., in sport venues) (D = 0.43); for studies conducted in the lab, the effect of competition outcome on testosterone reactivity patterns was relatively weak (D = 0.08), and only found in studies of men (D = 0.15; in women: D = − 0.04). Further, the 'winner-loser' effect was stronger among studies in which pre-competition testosterone was sampled earlier than (D = 0.38, after trim and fill correction) rather than within (D = 0.09) 10 min of the start of the competition. Therefore, these results also provide important insight regarding study design and methodology, and will be a valuable resource for researchers conducting subsequent studies on the 'winner loser' effect.     

Genetic variation and clonal diversity in populations of Nelumbo nucifera (Nelumbonaceae) in central China detected by ISSR markers

To obtain accurate estimates of population structure for purposes of conservation planning for wild lotus (Nelumbo nucifera Gaertn.) in central China, genetic diversity among and within six populations, and clonal diversity within another two populations of the species were analyzed. The genetic diversity was high (percentage of polymorphic bands, PPB = 90.0%; Shannon's information index, I = 0.383 ± 0.234) at the species level, but low within individual study populations (PPB = 35.8%; Shannon's information index I = 0.165 ± 0.241). The mean coefficient of gene differentiation (G_st) was 0.570, indicating that 43.0% of the genetic diversity resided within the population. Analysis of molecular variance (AMOVA) indicated that 50.47% of the genetic diversity among the study populations was attributed to geographical location while 12.3% was attributed to differences in their habitats. An overall value of mean estimated number of gene flow (N_m = 0.377) indicated that there was limited gene flow among the sampled populations. The level of clonal diversity found within the populations was considerably high (Simpson's diversity index, D = 0.985) indicating that clonal diversity contributes to a major extent to the overall genetic variation in the genetic structure of N. nucifera. On the basis of the high G_st and D values detected in this study we recommend that any future conservation plans for this species should be specifically designed to include those representative populations with the highest genetic variation for both in situ conservation and germplasm collection expeditions.     

Synthesis of a d-Ala-d-Ala peptide isostere via olefin cross-metathesis and evaluation of vancomycin binding

The alkene peptide isostere for the d-Ala-d-Ala dipeptide was synthesized via a convergent approach utilizing olefin cross-metathesis. The new isostere was then evaluated for binding to the last resort antibiotic, vancomycin. The alkene isostere exhibited a K_D = 90 μM in comparison to the native peptide (K_D = 2.3 μM) and Lac mutant (K_D = 2300 μM). This study demonstrates that loss of binding in vancomycin resistant strains as a result of a d-Ala to d-Lac mutation is from both the loss of a crucial hydrogen bond and introduction of a repulsive lone pair interaction.     

Effect of 1,25 dihydroxyvitamin D3 on intracellular IFN-γ and TNF-α positive T cell subsets in pulmonary tuberculosis

We studied the immunomodulatory effect of 1,25(OH)₂D₃ on single cell expression of IFN-γ and TNF-α cytokines in T cell subsets of pulmonary tuberculosis (PTB) patients (n = 22) and normal healthy subjects (n = 22). Peripheral blood mononuclear cells (PBMCs) were cultured with live Mycobacterium tuberculosis (MTB) with or without 1,25(OH)₂D₃ (10^?7 M) for 48 h. T cell subsets positive for IFN-γ and TNF-α were enumerated by flow cytometry and the culture supernatants were assayed for both the cytokines using ELISA. In both NHS and PTB patients, a significantly reduced percentage of IFN-γ and TNF-α expressing CD3+, CD3+CD4+ and CD3+CD8+ T cells were observed in cultures stimulated with live MTB and treated with 1,25(OH)₂D₃ compared to cultures without 1,25(OH)₂D₃ (NHS; CD3+ IFN-γ+: p < 0.0001; CD3+TNF-α +: p = 0.0292 and PTB; CD3+ IFN-γ+: p = 0.0292; CD3+ TNF-α +: p = 0.0028). The levels of IFN-γ and TNF-α in the culture supernatants of 1,25(OH)₂D₃ treated cultures were also found to be significantly decreased in both groups (NHS; IFN-γ: p = 0.0001; TNF-α: p < 0.0001) and (PTB; IFN-γ: p < 0.0001; TNF-α: p < 0.0001). A positive correlation was observed between IFN-γ and TNF-α expressing CD3+CD8+ T cells in MTB stimulated cultures treated with or without 1,25(OH)₂D₃ in NHS (p = 0.0001; p = 0.001, respectively) and PTB patients (p = 0.002; p = 0.005, respectively). The present study revealed the suppressive effect of 1,25(OH)₂D₃ on single cell expression of IFN-γ and TNF-α by CD3+CD4+ and CD3+CD8+ T cells in pulmonary tuberculosis. This suppressive effect of 1,25(OH)₂D₃ on proinflammatory and Th1 cytokine positive cells might have a role in reducing inflammation at the site of infection.     

An avifaunal survey of mesic manmade ecosystems “Oases” in algerian hot-hyperarid lands

Man made ecosystems of dry lands are key habitats due to their ecological characteristics to survey biodiversity. This study investigated bird diversity in three oases of the Northern Algerian Sahara (i.e., Biskra in 2006, Oued Souf in 2008 and Ouargla in 2009), by using the spot-mapping method. Bird density “D” (pairs/10 ha), species richness “S” (number species), diversity (Shannon index) “H′” (in bits), and evenness “E” varied from one oasis to another (Biskra: D = 98.5, S = 47, H′ = 4.49, E = 0.81; Oued Souf: D = 96, S = 33, H′ = 3.9, E = 0.77; Ouargla: D = 91.5, S = 44, H′ = 4.39, E = 0.80). Differences in bird diversity between the monitored palm groves are due to the ecological characteristics of each environment. Documented literature outlined close taxonomic similarities between bird assemblages of the study area with many Northern Saharan oases. The Hybrid Sparrow Passer domesticus x Passer. hispaniolensis and some Columbidae species including Columba livia, Streptopelia turtur, Streptopelia senegalensis, and Streptopelia decaocto were the abundant species throughout surveyed oases in which they represented more than half (55.6%) of the sum of species densities (D = 286 pairs/10 ha). These synthropic species have known a huge expansion of their distribution range throughout Algerian oases. The correspondence analysis allowed the aggregation of both families and species into oasis they belong to. One-way ANOVA was tested to analyse variations of both family and species densities between studied oases. The ANOVA revealed there was no significant variation either in family densities (p = 0.937) or in bird densities (p = 0.622) between the surveyed oases because of the small size of bird populations.     

Sampling plans for estimating pepper fruit damage levels by Oriental tobacco budworm,Helicoverpa assulta (Guenee), in hot pepper fields

Sequential sampling programs for the management of Oriental tobacco budworm, Helicoverpa assulta (Guenee), on red hot peppers were developed using the data of damaged pepper fruits by H. assulta. Taylor's power law indicated that the damaged pepper fruits were distributed randomly in hot pepper fields. A fixed-precision-level sequential sampling plan for classifying fruit damage density levels at a critical density of 2 damaged fruits per plant was developed to assist in decision making. The sequential classification sampling plan was evaluated using the operating characteristic (OC) and the average sample size (ASN) curves. The OC and ASN curves indicated that this sampling plan was robust and properly classified the population density. A resampling simulation demonstrated that average actual sampling precision value at D = 0.25 was ≤ 0.25. With sequential sampling for classifying the damaged fruit levels in terms of a critical density, sample size was fixed to 18 plants. The fixed-precision-level sequential sampling plan developed in this study should greatly enhance the monitoring efficacy and provide practical solutions suitable for reliable decision-making process in the management of H. assulta.     

Implementation of a dose–response curve for γ-radiation in the Portuguese population by use of the chromosomal aberration assay

An in vitro dose–response curve following exposure to γ-radiation was determined at the IST/ITN, by use of the chromosomal aberration assay. This is the first study of this kind carried out among the Portuguese population. Un-irradiated and γ-irradiated peripheral blood lymphocytes from 16 healthy donors were cultured. A total of 22,395 metaphases were analyzed for frequency and distribution of dicentrics and centric rings, as a function of the radiation dose. The dose–response data for dicentrics and dicentrics plus centric rings were fitted by use of a linear–quadratic model: Y_dic = (0.0011 ± 0.0006) + (0.0105 ± 0.0035)D + (0.0480 ± 0.0019)D² and Y_{dic + rings} = (0.0011 ± 0.0006) + (0.0095 ± 0.0036)D + (0.0536 ± 0.0020)D². Also, calibration curves related to age and gender were determined, but no significant differences were found. Following the establishment of the dose–response curves, a validation experiment was carried out with three individuals. Real and estimated doses, obtained with the dose–response curves, were in agreement. These results give us confidence to apply both dose–response calibration curves in future biological dosimetry requirements.     

Flower model traps reduced thrips infestations on a pepper crop in field

A flower model trap developed by modifying an artificial yellow chrysanthemum flower was more attractive to flower thrips than commercial yellow sticky traps. Installation of these flower model traps (20 traps per 50 m² plot) was reported to reduce seasonal populations of Frankliniella intonsa (Trybom) (Thysanoptera: Thripidae) on strawberry flowers in greenhouses. In this study, we sought to determine if the installation of such flower model traps would reduce thrips populations in a pepper field. The traps were installed at the bottom of the plant canopy at varying densities (0, 5, 10, and 20 traps) in 20 plots (each 3 × 5 m²) using a completely randomized design. Thrips populations on pepper flowers were sampled from 1 to 29 July in 2009. All thrips sampled on the flowers were identified as F. intonsa. A significant effect of treatment and sampling date was found from repeated-measure analysis of variance. The highest density (20 traps per 15 m²) of traps significantly reduced the female and male F. intonsa population compared to the control by 61 and 49%, respectively. However, no difference in immature thrips numbers was found among the treatments. These results indicate that this flower model trap can be a useful tool for the management of flower thrips on field-grown peppers.     

Seasonal monitoring of Drosophila suzukii (Diptera: Drosophilidae) in a mixed fruit production system

Drosophila suzukii Matsumura (Diptera: Drosophilidae), an invasive pest native to Southeast Asia, is now reported throughout North America and Europe. We used traps baited with apple cider vinegar to monitor D. suzukii adult presence in multiple crops and associated fruiting plants at the Wolfskill USDA Germplasm Repository in Winters, CA, USA from 2011 to 2013. Traps were placed in small (~ 160 m × 40 m on average) almond, apricot, cherry, fig, grape, mulberry, peach, persimmon, plum, and pomegranate deciduous fruit orchard blocks as well as a citrus block and evergreen trees located near a house at the repository. D. suzukii was present in all blocks with the greatest monthly deciduous fruit captures in the cherry and fig blocks. Few D. suzukii were captured in almond, apricot, pomegranate and grape blocks. Deciduous fruit blocks had two distinct periods of trap capture: spring through midsummer and again in fall. Most deciduous fruit blocks had low trap captures during the hottest summer months (August to September) and the coldest winter months (December to April). However, from late December through mid-January, high trap captures were associated with the citrus and house sites. This study provides seasonal trapping data of D. suzukii adults in an unsprayed multi-crop mosaic, and may serve as a model of adult capture patterns across smaller mixed-crop commercial orchards and associated urban landscapes.     

The influence of a TNF gene polymorphism on the severity of rheumatoid arthritis in the Brazilian Amazon

PurposeThe aim of this study was to investigate the influence of the TNF -308 G/A polymorphism in the promoter region of the tumor necrosis factor-α gene on the susceptibility and severity of rheumatoid arthritis (RA) in individuals from the Brazilian Amazon.MethodsA total of 323 individuals—192 healthy controls without arthritis and 131 individuals suffering from arthritis—were genotyped for this polymorphism using a methodology based on PCR-RFLP.ResultsThe frequency of the A allele (TNF2) in rheumatoid arthritis sufferers was not significantly higher than in the controls (p = 0.926; OR = 0.97; confidence interval 0.54–1.76). However, using a logistic regression model, when the patients were stratified according to whether the manifestations were preponderantly articular or systemic, there was a strong association between the TNF2 allele and systemic arthritis (p = 0.001; OR = 5.89; confidence interval = 1.98–17.5) as well as the use of anti-TNF immunotherapy (p = 0.023; OR = 1.10; confidence interval = 1.00–1.14). The main factors that were found to influence the risk of extra-articular disease were age greater than or equal to 60 years (p = 0.008; OR = 4.06; confidence interval = 1.45–11.38), disease duration greater than 10 years (p = 0.031; OR = 3.10; confidence interval = 1.11–8.63) and positive rheumatoid factor (p = 0.035; OR = 2.07; confidence interval = 1.05–4.09).ConclusionsThese results suggest that the TNF2 allele is associated with the more serious forms of the disease in individuals from the Brazilian Amazon but not with a risk for developing RA.     

Target Binding to S100B Reduces Dynamic Properties and Increases Ca2 +-Binding Affinity for Wild Type and EF-Hand Mutant Proteins

Mutations in the second EF-hand (D61N, D63N, D65N, and E72A) of S100B were used to study its Ca^2 + binding and dynamic properties in the absence and presence of a bound target, TRTK-12. With ^D63NS100B as an exception (^D63NK_D = 50 ± 9 μM), Ca^2 + binding to EF2-hand mutants were reduced by more than 8-fold in the absence of TRTK-12 (^D61NK_D = 412 ± 67 μM, ^D65NK_D = 968 ± 171 μM, and ^E72AK_D = 471 ± 133 μM), when compared to wild-type protein (^WTK_D = 56 ± 9 μM). For the TRTK-12 complexes, the Ca^2 +-binding affinity to wild type (^WT + TRTKK_D = 12 ± 10 μM) and the EF2 mutants was increased by 5- to 14-fold versus in the absence of target (^{D61N + TRTK}K_D = 29 ± 1.2 μM, ^{D63N + TRTK}K_D = 10 ± 2.2 μM, ^{D65N + TRTK}K_D = 73 ± 4.4 μM, and ^{E72A + TRTK}K_D = 18 ± 3.7 μM). In addition, R_ex, as measured using relaxation dispersion for side‐chain ¹⁵N resonances of Asn63 (^D63NS100B), was reduced upon TRTK-12 binding when measured by NMR. Likewise, backbone motions on multiple timescales (picoseconds to milliseconds) throughout wild type, ^D61NS100B, ^D63NS100B, and ^D65NS100B were lowered upon binding TRTK-12. However, the X-ray structures of Ca^2 +-bound (2.0 Å) and TRTK-bound (1.2 Å) ^D63NS100B showed no change in Ca^2 + coordination; thus, these and analogous structural data for the wild-type protein could not be used to explain how target binding increased Ca^2 +-binding affinity in solution. Therefore, a model for how S100B–TRTK‐12 complex formation increases Ca^2 + binding is discussed, which considers changes in protein dynamics upon binding the target TRTK-12.     

Log-relative growth: A new dendrochronological approach to study diameter growth in Cedrela odorata and Juglans neotropica,Central Forest,Peru

Many studies regarding growth in diameter at breast height (D) in trees suffer from several problems, including heteroscedasticity, temporal autocorrelation and very low statistical adjustments. In growth ring studies, growth models are sometimes omitted, presenting only a mean curve or smoothings, while studies that use models often do not address the above mentioned problems. For these reasons, this paper proposes a new approach to the classical modeling of D = f(t), where t is age (years), using the logarithmic transformation of the relative growth rate ln(1/D)(dD/dt) = ln f(D, A),where A is the asymptote of D based on the differential growth rate model of von Bertalanffy. High statistically significant adjustments for Cedrela odorata (ME = 65%, model efficiency, ME, an analogous to R² but for non-linear regressions), and Juglans neotropica (ME = 78%) were obtained and met all regression assumptions. These equations were integrated to obtain D = f(t) for both species, followed by self and independent validation. Based on these equations, different life history and silviculture traits were calculated for both species. This procedure does not appear to have been previously used in the study of tree growth.     

Calibrating acoustic acceleration transmitters for estimating energy use by wild adult Pacific salmon

This study is the first to calibrate acceleration transmitters with energy expenditure using a vertebrate model species. We quantified the relationship between acoustic accelerometer output and oxygen consumption across a range of swim speeds and water temperatures for Harrison River adult sockeye salmon (Oncorhynchus nerka). First, we verified that acceleration transmitters with a sampling frequency of 10 Hz could be used as a proxy for movement in sockeye salmon. Using a mixed effects model, we determined that tailbeat frequency and acceleration were positively correlated (p < 0.0001), independent of tag ID. Acceleration (p < 0.0001) was positively related to swim speed while fork length (p = 0.051) was negatively related to swim speed. Oxygen consumption and accelerometer output (p < 0.0001) had a positive linear relationship and were temperature dependent (p < 0.0001). There were no differences in swim performance (F_2,12 = 1.023, p = 0.820) or oxygen consumption (F_1,12 = 0.054, p = 0.332) between tagged and untagged individuals. Five tagged fish were released into the Fraser River estuary and manually tracked. Of the five fish, three were successfully tracked for 1 h. The above relationships were used to determine that the average swim speed was 1.25 ± 0.03 body lengths s^? 1 and cost of transport was 3.39 ± 0.17 mg O₂ kg^? 1 min^? 1, averaged across the three detected fish. Acceleration transmitters can be effectively used to remotely evaluate fine-scale behavior and estimate energy consumption of adult Pacific salmon throughout their homeward spawning migration.     

Chloroplast DNA variation and phylogeographic patterns in the Chinese endemic marsh herb Sagittaria potamogetifolia

We examined chloroplast DNA (cpDNA) atpB–rbcL intergenic spacer sequences variation within Sagittaria potamogetifolia, an endangered and endemic marsh herb in China. Sequence data were obtained from 54 individuals in six extant populations of the species. Sequences appeared to evolve neutral (Tajima's criterion D = −1.59826, 0.1 > P > 0.05 and Fu and Li's tests D* = −1.44484, P > 0.1; F* = −1.83446, P > 0.1). Eleven haplotypes were identified in S. potamogetifolia. A relatively high level of haplotype diversity (h = 0.0.699) and low level of nucleotide diversity (pi = 0.0035 ± 0.0020) were detected in S. potamogetifolia. Pairwise comparisons of F_st and Nm deduced from cpDNA variation suggested no significant genetic differentiation between populations of S. potamogetifolia excepted for the WY-1 population. Low genetic differentiation among populations and also among regions was consistently indicated by both hierarchical analyses of molecular variance (AMOVA) and the structure of a neighbor-joining tree. Lack of population differentiation between populations or between regions in cpDNA sequences may be due to effects of lower substitution rates or lineage sorting. In the minimum spanning network, all tip haplotypes except for the haplotype J were unique to a particular population, while the interior nodes except for the haplotype E were widespread (haplotype A). From nested clade analysis (NCA), the evolutionary events such as restricted gene flow with isolation by distance and allopatric fragmentation were inferred to responsible for the current distribution of S. potamogetifolia populations, as well as their genetic diversity.     

Are baseline and short-term corticosterone stress responses in free-living amphibians repeatable?

Amphibians respond to environmental stressors by secreting corticosterone, a stress hormone which promotes physiological and behavioral responses. Capture handling can be used to stimulate physiological stress response in amphibians. The use of single blood sampling and presentation of mean data often limits the quantification of within and between individual variation in baseline and short-term corticosterone stress responses in amphibians. It is important for studies of amphibian physiological ecology to determine whether baseline and short-term corticosterone stress responses are consistent or not. We quantified repeatability (r), a statistical measure of consistency, in baseline and short-term corticosterone stress responses to a standard capture and handling stress protocol in free-living adult male cane toads (Rhinella marina). Corticosterone metabolite concentrations were measured entirely non-invasively in male toad urine samples via an enzyme-immunoassay. During the first sampling occasion, urine samples were collected manually from individual male toads (n = 20) immediately upon field capture. Toads were handled for 5 min then transferred to plastic bags (constituting a mild stressor), and urine samples were collected hourly over 8 h in the field. The toads were resampled for baseline (0 h) urine corticosterone with hourly urine sampling over 8 h (for quantification of the stress induced corticosterone) at 14 day intervals on three consecutive occasions. Within and between sample variations in urinary corticosterone metabolite concentrations were also quantified. All toads expressed a corticosterone stress response over 8 h to our standard capture and handling stress protocol. Variations both within and between toads was higher for corrected integrated corticosterone concentrations than corticosterone concentrations at baseline, 3 or 6 h. Baseline urinary corticosterone metabolite concentration of the male toads was highly repeatable (r = 0.877) together with high statistical repeatabilities for 3 h (r = 0.695), 6 h (r = 0.428) and 8 h (r = 0.775) corticosterone metabolite concentrations, and for the total and corrected integrated corticosterone responses (r = 0.807; r = 0.743 respectively). This study highlights that baseline and short-term corticosterone stress responses are repeatable in free-living amphibians. Future studies should utilize this non-invasive tool to explore repeatability among seasons and across years, and determine its functional significance in relation to behavioral ecology and reproduction in amphibians generally.     

Microhabitat preferences and spatial distribution of the vesper rat (Nyctomys sumichrasti) in Colima,Mexico

The vesper rat (Nyctomys sumichrasti), a little-known arboreal rodent, was encountered during mark-recapture studies in Colima, Mexico, in January 2003-2007. We trapped on the Pacific coast at Playa de Oro (2003-2005) and in northern Colima (2006-2007). Each year five trap grids were established in heavily vegetated areas and typically run for 8 nights (100 trap stations per grid, each station with a ground trap and an arboreal trap elevated 1-2 m, 10×10 configuration with adjacent stations 10 m apart; 1,600 trap-nights per grid; 40,000 trap-nights total). Nyctomys sumichrasti occurs throughout most of Colima. On grids we captured 29 individuals a total of 41 times, with 90.2% of captures in arboreal traps and 69.0% of animals being adults. The sex ratio of adults was 1.22:1 (males:females), not statistically different from 1:1. Most adult females (77.8%) were pregnant or lactating. Mean mass was 41.3 and 38.6 g for males and females, respectively (P>0.05). Mean greatest distances traveled were longer for males (60.6 m) than females (20.2 m), with an overall mean of 40.4 m. One to six individuals were captured on 9 of 25 grids, with density estimates of 0.87-4.09/ha. We contrasted 14 environmental measures (most involving vegetation structure) for stations where N. sumichrasti was caught and not caught using logistic regression and nonparametric multiplicative regression, finding the species frequented sites flat to moderate in slope with considerable ground litter and relatively sparse high vegetation. In northern Colima, N. sumichrasti used areas with close trees, an open understory, and little grass. Other studies indicate the species sometimes occupies similar areas but with a relatively dense understory.     

Genetic structure of Octopus vulgaris (Cephalopoda,Octopodidae) in the central Mediterranean Sea inferred from the mitochondrial COIII gene

The polymorphism of the mitochondrial gene cytochrome oxidase III was studied in the Mediterranean octopus, Octopus vulgaris Cuvier, 1797. A total of 202 specimens from seven sampling sites were analysed with the aim of elucidating patterns of genetic structure in the central Mediterranean Sea and to give an insight into the phylogeny of the Octopus genus. Phylogenetic analyses showed that individuals from the central Mediterranean belong to the O. vulgaris species whose limits should nevertheless be clarified. Concerning genetic structure, two high-frequency haplotypes were present in all locations. The overall genetic divergence (Φ_ST = 0.05, P < 0.05) indicated a significant genetic structuring in the study area and an AMOVA highlighted a significant break between western and eastern Mediterranean basins (Φ_CT = 0.094, P < 0.05). Possible explanations for the observed patterns of genetic structuring are discussed with reference to their relevance for fisheries management.