Characterization of cyclophilin D in freshwater pearl mussel (Hyriopsis schlegelii)

Cyclophilin D (referred to as HsCypD) was obtained from the freshwater pearl mussel (Hyriopsis schlegelii).The full-length cDNA was 2 671 bp,encoding a protein consisting of 367 amino acids.HsCypD was determined to be a hydrophilic intracellular protein with 10 phosphorylation sites and four tetratricopeptide repeat (TPR) domains,but no signal peptide.The core sequence region YKGCIFHRIIKDFMVQGG is highly conserved in vertebrates and invertebrates.Phylogenetic tree analysis indicated that CypD from all species had a common origin,and HsCypD had the closest phylogenetic relationship with CypD from Lottia gigantea.The constitutive mRNA expression levels of HsCypD exhibited tissue-specific patterns,with the highest level detected in the intestines,followed by the gonads,and the lowest expression found in the hemocytes.     

陆地植被净初级生产力计算模型研究进展

植被净初级生产力(NPP)研究是全球变化与陆地生态系统的核心内容之一。在回顾NPP模型研究的基础上,综合分析了气候模型、生态生理过程模型、光能利用率模型各自的优缺点,并对NPP模型研究做出展望。生态生理过程模型是当前陆地NPP估算研究的主要手段,而区域尺度转换则是它所面临的关键问题。近年来光能利用率模型已成为NPP估算的一种全新手段,它利用遥感所获得的全覆盖数据,使区域及全球尺度的NPP估算成为可能,但其生态学机理还有待于进一步研究。已有研究表明,“生态一遥感耦合模型”将是陆地NPP估算的主要发展方向,它融合了生态生理过程模型和光能利用率模型的优点,增强了NPP模型估算的可靠性和可操作性。     

Molecular cloning and copy number variation of a ferritin subunit (Fth1) and its association with growth in freshwater pearl mussel Hyriopsis cumingii

Iron is one of the most important minor elements in the shells of bivalves. This study was designed to investigate the involvement of ferritin, the principal protein for iron storage, in shell growth. A novel ferritin subunit (Fth1) cDNA from the freshwater pearl mussel (Hyriopsis cumingii) was isolated and characterized. The complete cDNA contained 822 bp, with an open reading frame (ORF) of 525 bp, a 153 bp 5' untranslated region (UTR) and a 144 bp 3' UTR. The complete genomic DNA was 4125 bp, containing four exons and three introns. The ORF encoded a protein of 174 amino acids without a signal sequence. The deduced ferritin contained a highly conserved motif for the ferroxidase center comprising seven residues of a typical vertebrate heavy-chain ferritin. It contained one conserved iron associated residue (Try27) and iron-binding region signature 1 residues. The mRNA contained a 27 bp iron-responsive element with a typical stem-loop structure in the 5'-UTR position. Copy number variants (CNVs) of Fth1 in two populations (PY and JH) were detected using quantitative real-time PCR. Associations between CNVs and growth were also analyzed. The results showed that the copy number of the ferritin gene of in the diploid genome ranged from two to 12 in PY, and from two to six in JH. The copy number variation in PY was higher than that in JH. In terms of shell length, mussels with four copies of the ferritin gene grew faster than those with three copies (P<0.05), suggesting that CNVs in the ferritin gene are associated with growth in shell length and might be a useful molecular marker in selective breeding of H. cumingii.     

不同利用方式和载畜率对内蒙古典型草原群落初级生产力和植物补偿性生长的影响

基于2005年6月开始的放牧控制实验, 研究了不同草地利用方式和放牧强度对内蒙古典型羊草(Leymus chinensis)草原群落初级生产力和补偿性生长的影响。草地利用方式包括: 传统放牧、传统割草和放牧与割草轮换利用(混合利用)。结果表明: 传统放牧和混合利用方式下, 羊草群落地上生物量均随放牧强度增加逐渐降低。高载畜率下, 羊草群落地上净初级生产力表现为: 混合利用>传统割草>传统放牧, 说明混合利用方式优于传统放牧和传统割草利用方式; 而低载畜率则有利于草原的可持续利用和植物的补偿性生长。这一实验结果在一定程度上验证了放牧优化假说。在不同利用方式、地形因素的影响和采用不同的群落净生长量计算方法时, 随着放牧强度的变化, 等补偿、超补偿和欠补偿效应都可能出现。在低载畜率下, 群落大多表现出等补偿生长, 在高载畜率下, 群落大多表现出欠补偿生长。植物群落的补偿性生长与载畜率的关系可以用开口向下的二次函数或者斜率为负的线性函数模拟。说明随着载畜率的增加, 一些系统表现为欠补偿生长, 而另一些系统则表现为超补偿生长, 这可能与植物群落组成、地形部位(平地、坡地)和载畜率以及净生长量的计算方法有关。     

Atlantic salmon (Salmo salar) and brown trout (Salmo trutta) differ in their suitability as hosts for the endangered freshwater pearl mussel (Margaritifera margaritifera) in northern Fennoscandian rivers

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气候变化对阔叶红松林不同演替阶段红松种群生产力的影响

本文以长白山地区阔叶红松林不同演替阶段(次生杨桦林、次生针阔混交林、原始红松林)内红松种群作为研究对象,采用树轮学与相对生长式相结合,获取红松种群净初级生产力(NPP)连年生长(1921—2006年)数据以及相对增长率的年际变化数据,建立红松种群NPP与年际和季节性气候因子的关系,分析不同气候时期长白山阔叶红松林不同演替阶段内红松种群NPP年际变化特征及其对气候变化的响应差异.结果表明： 研究期间,不同演替阶段红松种群NPP与气候因子响应关系存在差异.随着温度上升,次生杨桦林红松种群NPP与上年生长季和当年生长季低温由显著负相关关系转变为显著正相关关系;次生针阔混交林红松种群NPP由与当年春季最低温度的正相关关系转变为与上年和当年生长季温度的显著正相关关系,气候因素对次生针阔混交林红松种群NPP影响的滞后效应增强;原始红松林红松种群NPP与温度的相关性减弱,与上年生长季降水量的正相关关系增强.研究区气候变化表现为低温和平均温度显著上升,而最高温度和降水没有明显变化.气候变化有利于提高演替初级阶段次生杨桦林和演替中级阶段次生针阔混交林内红松种群生产力,尤其是次生针阔混交林,而对演替顶极阶段红松种群NPP影响不明显.     

Strong spatial differentiation of N and P deficiency,primary productivity and community composition between Nyanza Gulf and Lake Victoria (Kenya,East Africa) and the implications for nutrient management

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Significant association between SNPs in the superoxide dismutase 3, extracellular (SOD3) gene and resistance to Aeromonas hydrophila in the freshwater mussel Hyriopsis cumingii

Extracellular superoxide dismutase (SOD3) is a major antioxidant enzyme that protects organs from damage by reactive oxygen species (ROS). In this study, the SOD3 gene was identified and characterized from the freshwater mussel Hyriopsis cumingii (Hc‐SOD3). The cDNA sequence consists of 763 bp, encoding a protein of 208 amino acids. The amino acid sequence possesses two CuZnSOD signature sequences, and amino acids required for binding of Cu (His‐93, ‐95, ‐110 and ‐169) and Zn (His‐110, ‐118, ‐129 and Asp‐132) were conserved in Hc‐SOD3. The Hc‐SOD3 genomic sequence was 9165 bp in length, containing four exons and three introns. Eighteen single nucleotide polymorphisms were detected in the Hc‐SOD3 gene from resistant stock (RS) and susceptible stock (SS) of H. cumingii to Aeromonas hydrophila. The genotype and allele distribution were examined in resistant and susceptible stocks. Among them, a C/G substitution at the g.7994C>G locus and G/C substitution at the g.8087G>C locus were significantly associated with resistance/susceptibility of H. cumingii to A. hydrophila, both in genotype (P = 0.017, P = 0.004 respectively) and allele frequency (P = 0.021, P = 0.006 respectively). Linkage disequilibrium analysis revealed that g.7994C>G, g.8001A>G, g.8035G>A, g.8087G>C and g.8191T>A were in linkage disequilibrium. The results suggest that the two polymorphic loci, g.7994C>G and g.8087G>C, could be potential genetic markers for future molecular selection of strains that are resistant to diseases.     

Structural characteristics of gonadal development and hermaphroditic phenomenon in freshwater pearl mussel,Sinohyriopisis schlegelii (Hyriopisis schlegelii)

The period of gonads development was first studied from one to five years in the freshwater pearl mussel Hyriopisis schlegelii. It lasted for 36 months and was divided into three main stages: initiation of gonad formation, a stable growth phase, and a reproductive cell development phase. Each reproductive cycle consisted of five stages: proliferative stage (from late January to late February), growth stage (from late February to late March), maturation stage, spawning stage (from early April to late October) and recovery stage (from early November to late January). Interestingly, a hermaphroditic phenomenon was observed in this mussel for the first time, which appears during the development stage from 26 to 32 months. Male and female follicular tissues coexisted in hermaphrodite individuals with the male follicular tissue accounting for more than 90% of the whole gonad tissue. No hermaphroditic phenomenon was observed in matured gonad. We thus speculate that self-fertilization does not exist in H. schlegelii.     

内蒙古草原区植被净初级生产力及其与气候的关系

利用NOAA/AVHRR GIMMSNDVI数据、土地覆盖分类数据、气象数据等,基于改进的基于光能利用率的净初级生产力(Net Primary productivity,NPP)遥感估算模型对内蒙古草原区1982-2006年的NPP进行估算,并分别以年、季节和月为时间单位,计算基于像元的NPP与降水、温度之间的相关及偏相关系数,分析不同时间单位及尺度上NPP与气候的关系。结果表明,1982-2006年内蒙古草原区NPP总量呈波动增加的趋势,平均增加值为0.861Mt C/a。以年为时间单位,内蒙古草原区年NPP与降水的关系比较明显。以季节为时间单位,年际春季和夏季NPP与降水的关系比较明显,秋季二者关系相对较弱,春季和秋季NPP与温度的相关系数和偏相关系数空间格局比较一致,且相关性明显高于夏季。以月为时间单位的相关水平明显高于年际水平,多年平均年内月NPP与降水、温度的相关程度明显增强,除去降水的影响,月均温对NPP的影响明显下降,且空间格局也有明显的变化,说明以月为时间单位在年内尺度上降水对植被生长的影响比温度要大。而以4、7、10月份为例,在年际尺度上,虽然各月份NPP均受降水的影响较大,但与降水关系最为密切的是4月份和10月份NPP,与之相比,7月份NPP与温度的关系明显高于其他两月。